TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140549.12 - phase: 0 
         (504 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AW757181                                                               75  7e-14
AW781414                                                               50  1e-08
CA784687 similar to SP|Q9JX33|DXR_N 1-deoxy-D-xylulose 5-phospha...    47  3e-05
TC224454                                                               38  0.012
TC226554 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa...    32  0.51
BM528914                                                               32  0.87
TC226555 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (A...    32  0.87
AW703638 weakly similar to GP|9758683|dbj| tyrosine-specific pro...    31  1.1
BE210776                                                               31  1.5
TC206178 similar to UP|Q8LF59 (Q8LF59) DNA-binding protein, part...    30  1.9
BU577928 similar to GP|10176918|db auxin response factor-like pr...    30  2.5
TC227562 similar to UP|LB37_ARATH (Q9FN11) LOB domain protein 37...    30  2.5
BU763938 similar to GP|21537026|gb| beta-N-acetylhexosaminidase-...    30  3.3
AW598068 similar to GP|12060516|dbj| P0475H04.11 {Oryza sativa (...    30  3.3
TC224910 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14 (At1g14...    30  3.3
TC204728 weakly similar to UP|Q94FP5 (Q94FP5) Glycine-rich prote...    30  3.3
AW203350                                                               30  3.3
BU761426                                                               30  3.3
BI893904 similar to GP|15809850|gb AT5g37540/mpa22_p_70 {Arabido...    29  4.3
TC231443 weakly similar to UP|O07856 (O07856) Beta-(1,3-1,4)-glu...    29  4.3

>AW757181 
          Length = 422

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 43/136 (31%), Positives = 66/136 (47%), Gaps = 1/136 (0%)
 Frame = +3

Query: 127 GFFMVKFDQAADKEKVITGGPWLIFDHCLAVTHWTPEFASPNAKVDRTVVWVRFPGLNLV 186
           G+++V+F      +  +  G  ++ DH + V  W P F     K+ +   WV+F  L + 
Sbjct: 9   GYYLVQFTSEEGYKNAMFNGS*MVADHYIIV*RWKPTFIQNAKKM*KVAEWVQFLLLPMK 188

Query: 187 YYDESFLLAMASALGRPIKVDTNTLKVERGKFARVCVEIDLT-VPVVGKIWVNGHWYKVQ 245
            Y + FL    S LG  + +D  T    + +F+  CVE+ L    +V K     + Y V+
Sbjct: 189 LYHDVFL*TTWSLLGTILNID*CTSIHSKARFSPTCVEVVLNKTKLVSKFEARWNVYFVE 368

Query: 246 YEGLHLICTNCGCYGH 261
             GLHLIC  CG YGH
Sbjct: 369 *NGLHLICFQCGTYGH 416


>AW781414 
          Length = 241

 Score = 49.7 bits (117), Expect(2) = 1e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 163 EFASPNAKVDRTVVWVRFPGLNLVYYDESFLLAMASAL 200
           EF SP A+VD+T+V + F GL LVY+DESFLLAM   L
Sbjct: 72  EFVSPTAEVDQTLV*IHFSGLILVYFDESFLLAMTRLL 185



 Score = 27.7 bits (60), Expect(2) = 1e-08
 Identities = 11/24 (45%), Positives = 16/24 (65%)
 Frame = +1

Query: 139 KEKVITGGPWLIFDHCLAVTHWTP 162
           ++KV+    W+IFDH L VT  +P
Sbjct: 1   RKKVMNRRSWMIFDHYLVVTQ*SP 72


>CA784687 similar to SP|Q9JX33|DXR_N 1-deoxy-D-xylulose 5-phosphate
           reductoisomerase (EC 1.1.1.267) (DXP reductoisomerase),
           partial (6%)
          Length = 437

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 31/125 (24%), Positives = 50/125 (39%), Gaps = 4/125 (3%)
 Frame = -1

Query: 127 GFFMVKFDQAADKEKVITGGPWLIFDHCLAVTHWTPEFASPNAKVDRTVVWVRFPGLNLV 186
           GF+   F    D   V   G W +    L ++ W+  F     +      W R    +  
Sbjct: 419 GFYEFSFASLEDLRSVWLVGNWNLQP*SLRLSQWSSNFNPNKVRQTHAQCWKRVHEFSQE 240

Query: 187 YYDESFLLAMASALGRPIKVDTNTLKVERGKFARVCVEIDLTVPVVGKIWVNGHWY---- 242
           Y+D   L  +  A+G PI +D  T     G F+ + +++DL   +  ++ V    Y    
Sbjct: 239 YWDLQLLFEIVGAVGSPITLDEATKSKTFGHFSCILMDVDLAKTLHLEVMVERESYAFLV 60

Query: 243 KVQYE 247
           KV YE
Sbjct: 59  KVNYE 45


>TC224454 
          Length = 660

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +2

Query: 127 GFFMVKFDQAADKEKVITGGPWLIFDHCLAVTHWTPEFASPNAKVDRTVVWVRFPGLNLV 186
           GF+   F    D  KV   G W +    L +T W P+F   N +     +WVR   L L 
Sbjct: 413 GFYKFNFASLEDLHKVWIAGSWKLQLGILRLTQWIPDFNPYNMRQTHV*LWVRLFELPLE 592

Query: 187 YY 188
           Y+
Sbjct: 593 YW 598


>TC226554 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (25%)
          Length = 944

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 17/59 (28%), Positives = 26/59 (43%)
 Frame = +3

Query: 258 CYGHLGRNCMEKPSTFDPRSPNHHTAGGNNPPSNPEPSQPRQNPTQTCPDAINSQLMAC 316
           CY HL    M +   F+ +S    + GG+  P+ P P  PR        D ++S +  C
Sbjct: 534 CYAHLAATQMGQFMKFEDKSETSSSHGGSGIPAPPVPQLPR------LQDKVSSSMFFC 692


>BM528914 
          Length = 428

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 12/31 (38%), Positives = 16/31 (50%)
 Frame = +2

Query: 253 CTNCGCYGHLGRNCMEKPSTFDPRSPNHHTA 283
           C NCG   H  ++CME+P     +  N H A
Sbjct: 335 CENCGAMTHDSKSCMERPRRVGAKWTNKHIA 427


>TC226555 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (AGO1)-like
           protein {Arabidopsis thaliana;} , partial (17%)
          Length = 899

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 258 CYGHLGRNCMEKPSTFDPRSPNHHTAGGNNPPSNPEPSQPR 298
           CY HL    M +   F+ +S    + GG+  P+ P P  PR
Sbjct: 379 CYAHLAATQMGQFMKFEDKSETSSSHGGSGMPAPPVPQLPR 501


>AW703638 weakly similar to GP|9758683|dbj| tyrosine-specific protein
           phosphatase-like protein {Arabidopsis thaliana}, partial
           (6%)
          Length = 404

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/45 (35%), Positives = 24/45 (52%), Gaps = 4/45 (8%)
 Frame = +3

Query: 275 PRSPNHHTAGGNNPPSNPEPSQPRQNPTQT----CPDAINSQLMA 315
           P SP+     G NPPS P+P+   ++ T T    CP + +S L +
Sbjct: 186 PPSPSSSNGDGRNPPSPPKPA*RTESETPTWTNSCPTSKDSTLFS 320


>BE210776 
          Length = 417

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = -3

Query: 254 TNCGCYGHLGRNCMEKPSTFDPRSPNHHTAG--GNNPPSNPEPSQPRQNP 301
           TNC C G      M       PRSP     G  G  P  +  P+ P Q+P
Sbjct: 367 TNCACLGRWEPRTMRACRPS*PRSPGSGLLGCAGTGPAHSTRPTTPAQHP 218


>TC206178 similar to UP|Q8LF59 (Q8LF59) DNA-binding protein, partial (69%)
          Length = 1138

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 11/29 (37%), Positives = 15/29 (50%)
 Frame = +2

Query: 252 ICTNCGCYGHLGRNCMEKPSTFDPRSPNH 280
           IC NCG  GH+   C  K   ++ + P H
Sbjct: 398 ICHNCGLPGHIASECTTKSLCWNCKEPGH 484


>BU577928 similar to GP|10176918|db auxin response factor-like protein
           {Arabidopsis thaliana}, partial (13%)
          Length = 362

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 287 NPPSNPEPSQPRQNPTQTCPDA 308
           NP S P P +PR N   +CPD+
Sbjct: 193 NPLSMPRPKRPRANAVPSCPDS 258


>TC227562 similar to UP|LB37_ARATH (Q9FN11) LOB domain protein 37, partial
           (45%)
          Length = 1148

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/48 (31%), Positives = 24/48 (49%), Gaps = 1/48 (2%)
 Frame = -2

Query: 270 PSTF-DPRSPNHHTAGGNNPPSNPEPSQPRQNPTQTCPDAINSQLMAC 316
           PS+F  PR  +  T  G +PPS  +P+      +   P+A+ +   AC
Sbjct: 757 PSSFRTPRRSSTETLAGGSPPSARKPASAGDRDSAAAPEALPAPPTAC 614


>BU763938 similar to GP|21537026|gb| beta-N-acetylhexosaminidase-like protein
           {Arabidopsis thaliana}, partial (7%)
          Length = 443

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 21/103 (20%), Positives = 38/103 (36%)
 Frame = +2

Query: 280 HHTAGGNNPPSNPEPSQPRQNPTQTCPDAINSQLMACNQNGNSIIDHNKDVTANKRNAIN 339
           HHT   ++PP +P P  P    T   P    +   + N +  + + H +  +    +   
Sbjct: 38  HHTKPPSSPPHSPSPPPP-TTTTSISPSPSAATRTSSNPSTTTHLSHKQSTSPTNTSHHC 214

Query: 340 RIDDNQVLHGDWLVVTRRKKTPIQHSLNASKSVTHKTNRFQAL 382
           R+  +Q     W  + +   TP      +  S+ H     Q L
Sbjct: 215 RLSRSQ-----WWTLLQNSSTPWTSPTLSPSSLPHVLPSLQRL 328


>AW598068 similar to GP|12060516|dbj| P0475H04.11 {Oryza sativa (japonica
           cultivar-group)}, partial (48%)
          Length = 300

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/41 (31%), Positives = 19/41 (45%)
 Frame = +3

Query: 263 GRNCMEKPSTFDPRSPNHHTAGGNNPPSNPEPSQPRQNPTQ 303
           G NC++KP+ +   +  HH     N     E S+ RQ   Q
Sbjct: 30  GSNCLQKPAKWHQETQKHHRNNQRNGSQVSEESEVRQEDYQ 152


>TC224910 similar to UP|Q940S0 (Q940S0) T5E21.14/T5E21.14
           (At1g14670/T5E21.14), partial (22%)
          Length = 726

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = -2

Query: 269 KPSTFDPRSPNHHTAGGNNPPS 290
           +PS   PRS +HH+  GNN PS
Sbjct: 443 QPSQ*IPRSASHHSTSGNNSPS 378


>TC204728 weakly similar to UP|Q94FP5 (Q94FP5) Glycine-rich protein GRP14,
           partial (25%)
          Length = 579

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 260 GHLGRNCMEKP-STFDPRSPNHHTAGGNNP--PSNPEPSQPRQNPTQTCPD 307
           G LG + + +P S   P +P +  +    P  PSNPEP+ P+ +P    P+
Sbjct: 339 GRLGPSPLPRPPSPLGPPNPPNPPSPEGPPILPSNPEPTPPKGSPLLPTPE 187


>AW203350 
          Length = 411

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 17/43 (39%), Positives = 22/43 (50%)
 Frame = +1

Query: 253 CTNCGCYGHLGRNCMEKPSTFDPRSPNHHTAGGNNPPSNPEPS 295
           C  CG  GH  R+C   P +    +PN +TA   N P+ P PS
Sbjct: 16  CYKCGKPGHWSRDC---PFSAPNPNPNSNTATTPN-PNTPNPS 132


>BU761426 
          Length = 437

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -2

Query: 258 CYGHLGRN--CMEKPSTFDPRSPN 279
           C+GH GR   C E P T  P SPN
Sbjct: 118 CFGHNGRRKPCSEPPQTASPPSPN 47


>BI893904 similar to GP|15809850|gb AT5g37540/mpa22_p_70 {Arabidopsis
           thaliana}, partial (29%)
          Length = 421

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +2

Query: 270 PSTFDPRSPNHHTAGGNNPPSNPE---PSQPRQNPTQTCPDAINSQLMAC 316
           PS   P+SPN  T    +PP NP     SQP ++ ++T      S   AC
Sbjct: 179 PSPSKPKSPNSRTV---SPPDNPRTTTTSQPGRSTSETTQTPRASATSAC 319


>TC231443 weakly similar to UP|O07856 (O07856) Beta-(1,3-1,4)-glucanase
           precursor, partial (25%)
          Length = 866

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 465 PHSTEHVTNPSQNNHEPVTTYTEDDTIPDPSSSMPQDTP 503
           PHST H T+  Q N  P    T+  T P P +  P  +P
Sbjct: 565 PHSTSHTTSLQQPNLHPTPKRTK--T*PSPETPPPPSSP 455


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.315    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,741,085
Number of Sequences: 63676
Number of extensions: 397055
Number of successful extensions: 2963
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of query: 504
length of database: 12,639,632
effective HSP length: 101
effective length of query: 403
effective length of database: 6,208,356
effective search space: 2501967468
effective search space used: 2501967468
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)