BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140546.1 - phase: 0
(720 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225799 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation fac... 1142 0.0
TC225801 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation fac... 407 e-114
TC225803 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation fac... 252 4e-81
TC233982 similar to UP|Q84PB3 (Q84PB3) Eukaryotic initiation fac... 270 2e-72
TC225800 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation fac... 241 6e-64
TC225802 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation fac... 219 3e-57
BI424738 similar to GP|7576200|emb protein synthesis initiation ... 68 1e-11
TC225113 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protei... 64 3e-10
TC225131 similar to UP|Q9FMK4 (Q9FMK4) Topoisomerase-like protei... 62 7e-10
TC228434 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protei... 61 2e-09
TC219177 similar to UP|Q76E23 (Q76E23) Eukaryotic translation in... 56 5e-08
TC210266 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protei... 47 3e-05
TC226603 similar to UP|Q93YR3 (Q93YR3) HSP associated protein li... 42 0.001
TC226604 similar to UP|Q93YR3 (Q93YR3) HSP associated protein li... 40 0.003
TC211827 similar to UP|Q76E23 (Q76E23) Eukaryotic translation in... 40 0.005
TC208119 similar to GB|AAL25838.1|23379334|AY057393 one-helix pr... 38 0.018
BM142773 similar to GP|10177300|db topoisomerase-like protein {A... 36 0.052
BU965053 similar to SP|Q9FPQ6|GP1_C Vegetative cell wall protein... 35 0.089
TC227567 similar to UP|Q9MA20 (Q9MA20) T5E21.13, partial (15%) 35 0.12
TC209202 UP|Q84P43 (Q84P43) Protein kinase Pti1, partial (27%) 33 0.58
>TC225799 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation factor 4,
eIF4-like protein, partial (65%)
Length = 2529
Score = 1142 bits (2955), Expect = 0.0
Identities = 577/696 (82%), Positives = 618/696 (87%), Gaps = 10/696 (1%)
Frame = +2
Query: 34 LKLRHDIDAELFGEDQSWGRVENNPPTQIQNRYSEPDNRDWRGRSAQPPANADERSWDNI 93
LK++ DI+AELFGEDQSW R ENNP Q QNRY+EPDNRDWRGRS Q NADERSWDN+
Sbjct: 2 LKIKQDIEAELFGEDQSWARPENNPTQQFQNRYTEPDNRDWRGRSGQLSGNADERSWDNL 181
Query: 94 KENREFGNTSQVNRQDQPRT---------NQGGGPAPTLVKAEVPWSARRGTLSDKDRVL 144
KENREFGNTS NRQDQ + NQGGGP PTLVKAEVPWSARRGTLSDKDRVL
Sbjct: 182 KENREFGNTS--NRQDQLNSQFARTQISSNQGGGPTPTLVKAEVPWSARRGTLSDKDRVL 355
Query: 145 KTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSD 204
KTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSD
Sbjct: 356 KTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSD 535
Query: 205 LNEKLPSFPSEESGGKEITFKRLLLDNCQEAFEGAGKLREELAQMTSPEQETERRDKDRL 264
LNEKLP FPS+E GGKEITFKR+LL+ CQEAFEGA KLREEL QMT+P+QE ERRDK+RL
Sbjct: 536 LNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPDQEMERRDKERL 715
Query: 265 VKIRTLGNIRLIGELLKQKMVPERIVHHIVQELLGAADSNVCPAEENVEAICHFFNTIGK 324
VKIRTLGNIRLIGELLKQKMVPE+IVHHIVQELLG D VCPAEENVEAIC FFNTIGK
Sbjct: 716 VKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDIKVCPAEENVEAICQFFNTIGK 895
Query: 325 QLDESPKSRRINDMYFGRLKELSTNPQLAPRMKFMVRDVIDLRASNWVPRREEIKAKTIS 384
QLDESPKSRRINDMYF RLKELSTNPQLAPR++FMVRDV+DLR++NW+PRREE+KAKTI+
Sbjct: 896 QLDESPKSRRINDMYFIRLKELSTNPQLAPRLRFMVRDVLDLRSNNWIPRREEVKAKTIT 1075
Query: 385 EIHDEAEKNLGLRPGATAGMRNTR-VTGVQGNTGAGGFPIARPGTGGLMPGMPGARKMPG 443
EIH EAEKNLGLRPGATA MRN R V+G QGNTG GGFPIARPGTGGLMPGMPG R+MPG
Sbjct: 1076EIHSEAEKNLGLRPGATASMRNNRVVSGAQGNTGPGGFPIARPGTGGLMPGMPGTRRMPG 1255
Query: 444 MPGIDNDNWEVPRTRSMPRGDMSGAQTGGRGQSPYLSKPSVINSKLLPQGSSGLISGKNS 503
MPGIDNDNWE+PRTRSMPRGD+SG TGGRGQSP+LSK S +NSKLLPQGS G+ISG++S
Sbjct: 1256MPGIDNDNWEMPRTRSMPRGDISGMPTGGRGQSPFLSKTSTVNSKLLPQGSGGIISGRSS 1435
Query: 504 ALVLGGGTPSALPSNIVSGTEPAPQIPSPVKPVSAASPEKPQAPAVKLNIDDLHRKTVSL 563
ALV G G P P N+ EP PQIPSPVK VSA EKPQ PA KLNID+L RKTVSL
Sbjct: 1436ALVHGAGAPVRSP-NLGFSAEPTPQIPSPVKAVSAIPSEKPQPPAAKLNIDELQRKTVSL 1612
Query: 564 LEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVANLIEYLFTKKI 623
LEEYFNVRLLDEALQCVEELKAP Y+PE VKEAISL LDKSPP EPVANL EYLF KKI
Sbjct: 1613LEEYFNVRLLDEALQCVEELKAPAYYPEFVKEAISLALDKSPPCAEPVANLFEYLFIKKI 1792
Query: 624 LTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVLSAGLDFKVVKEILKKVGDDY 683
L+ARDIGTGC+LFASLLDDIGIDLPKAPNNFGEIIGKLVL+ GLDFKVV EILKKV DD
Sbjct: 1793LSARDIGTGCMLFASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVTEILKKVEDDR 1972
Query: 684 FQKAIFNSAVQVISSASGQAVLDSQASDIEACQALF 719
FQKAIF+SA+QVI+SASGQAVLD+QASDIEACQ+LF
Sbjct: 1973FQKAIFSSALQVITSASGQAVLDAQASDIEACQSLF 2080
>TC225801 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation factor 4,
eIF4-like protein, partial (25%)
Length = 1233
Score = 407 bits (1046), Expect = e-114
Identities = 208/296 (70%), Positives = 238/296 (80%), Gaps = 2/296 (0%)
Frame = +2
Query: 427 GTGGLMPGMPGARKMPGMPGIDNDNWEVPRTRSMPRGDMSGAQTGGRGQSPYLSKPSVIN 486
G GGLMPGMPG RKMPGMPG DN NWE+P+TRSMPRGD+ G Q G+ S LSK + +N
Sbjct: 8 GAGGLMPGMPGTRKMPGMPGFDNGNWEMPKTRSMPRGDLPGVQAAGQSNSALLSKSTTLN 187
Query: 487 SKLLPQGSSGLISGKNSALVLGGGTPSALPSNIVSGTEPAPQIPSPVKPVSAA--SPEKP 544
SKLLPQGS G+ISG+NSALV GGGT N G E APQ+ SP K + S EKP
Sbjct: 188 SKLLPQGSGGIISGRNSALVHGGGT------NFGLGPEAAPQLSSPAKTATPVPVSSEKP 349
Query: 545 QAPAVKLNIDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKS 604
Q PA +LN D+L +TVSLLEEYF+V+LL+EALQCVEELK+P+YHPEVVKEAISL LDKS
Sbjct: 350 QHPAARLNTDNLRCRTVSLLEEYFSVQLLEEALQCVEELKSPSYHPEVVKEAISLALDKS 529
Query: 605 PPRVEPVANLIEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVLS 664
PP VEPVANLIEYL+ KKILT DIGTGCLLF SLLDDIGIDLPKAP+NFGEIIGKL+L+
Sbjct: 530 PPCVEPVANLIEYLYIKKILTPIDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILA 709
Query: 665 AGLDFKVVKEILKKVGDDYFQKAIFNSAVQVISSASGQAVLDSQASDIEACQALFE 720
GLD K+V+EILKKV D FQ+AIF+S V I SASGQAVLD+Q SDIEACQ++ +
Sbjct: 710 GGLDCKLVREILKKVDDGMFQRAIFDSVVGAIRSASGQAVLDAQTSDIEACQSMLK 877
>TC225803 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation factor 4,
eIF4-like protein, partial (21%)
Length = 1133
Score = 252 bits (644), Expect(2) = 4e-81
Identities = 129/163 (79%), Positives = 143/163 (87%)
Frame = +2
Query: 555 DLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVANL 614
DL RKTVSLLEEYF+VRLL+EALQCVEELK+P+YHPEVVKEAI L LDKSPP VE VANL
Sbjct: 248 DLCRKTVSLLEEYFSVRLLEEALQCVEELKSPSYHPEVVKEAIYLALDKSPPCVETVANL 427
Query: 615 IEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVLSAGLDFKVVKE 674
IEYL+ KKILT DIGTGCLLF SLLDDIGIDLPKAP+NFGEIIGKL+L+ GLDFKVV E
Sbjct: 428 IEYLYIKKILTPLDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDFKVVGE 607
Query: 675 ILKKVGDDYFQKAIFNSAVQVISSASGQAVLDSQASDIEACQA 717
ILKKV DD F++AIF+S V I SAS QA+LD+Q SDIE CQ+
Sbjct: 608 ILKKVDDDMFRRAIFDSVVGAIRSASEQAILDAQTSDIEVCQS 736
Score = 68.6 bits (166), Expect(2) = 4e-81
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +3
Query: 476 SPYLSKPSVINSKLLPQGSSGLISGKNSALVLGGGTPSALPSNIVSGTEPAPQIPSP 532
S LSK + +NSKLLPQGS G+ISG+NSALV GGGT S +N G E APQ+ SP
Sbjct: 9 SALLSKSTTLNSKLLPQGSGGIISGRNSALVHGGGTFSTSSTNFCLGPEAAPQLSSP 179
>TC233982 similar to UP|Q84PB3 (Q84PB3) Eukaryotic initiation factor-like
protein, partial (19%)
Length = 478
Score = 270 bits (690), Expect = 2e-72
Identities = 131/159 (82%), Positives = 146/159 (91%)
Frame = +2
Query: 246 LAQMTSPEQETERRDKDRLVKIRTLGNIRLIGELLKQKMVPERIVHHIVQELLGAADSNV 305
L +MT+PEQE ER DK+RL+K+RTLGNIRLIGELLKQKMVPE+IVHHIVQELLG+ DS
Sbjct: 2 LKRMTAPEQEMERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSKS 181
Query: 306 CPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFGRLKELSTNPQLAPRMKFMVRDVID 365
CP EENVEAIC FFNTIGKQLDESPKSRRIND+YF RLKELS+N QL PR++FM+RDVI+
Sbjct: 182 CPVEENVEAICQFFNTIGKQLDESPKSRRINDIYFSRLKELSSNLQLVPRLRFMIRDVIE 361
Query: 366 LRASNWVPRREEIKAKTISEIHDEAEKNLGLRPGATAGM 404
LRASNWVPRREE+KAKTI+EIH EAEKNLGLRPGATA M
Sbjct: 362 LRASNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASM 478
>TC225800 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation factor 4,
eIF4-like protein, partial (14%)
Length = 840
Score = 241 bits (616), Expect = 6e-64
Identities = 124/143 (86%), Positives = 131/143 (90%)
Frame = +3
Query: 577 LQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVANLIEYLFTKKILTARDIGTGCLLF 636
LQCVEELKAP Y+PE VKEAISL LDKSPP VEPVANL EYL KKIL+ARDIGTGC+LF
Sbjct: 3 LQCVEELKAPAYYPEFVKEAISLALDKSPPCVEPVANLFEYLLIKKILSARDIGTGCMLF 182
Query: 637 ASLLDDIGIDLPKAPNNFGEIIGKLVLSAGLDFKVVKEILKKVGDDYFQKAIFNSAVQVI 696
ASLLDDIGIDLPKAPNNFGEIIGKLVL+ GLDFKVV EILKKV DD FQKAIF+SA+QVI
Sbjct: 183 ASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVVEILKKVEDDRFQKAIFSSALQVI 362
Query: 697 SSASGQAVLDSQASDIEACQALF 719
SS SGQAVLDSQASDIEACQ+LF
Sbjct: 363 SSVSGQAVLDSQASDIEACQSLF 431
>TC225802 similar to UP|Q8H179 (Q8H179) Eukaryotic initiation factor 4,
eIF4-like protein, partial (13%)
Length = 440
Score = 219 bits (558), Expect = 3e-57
Identities = 107/145 (73%), Positives = 119/145 (81%), Gaps = 1/145 (0%)
Frame = +3
Query: 430 GLMPGMPGARKMPGMPGIDNDNWEVPRTRSMPRGDMSGAQTGGRGQSPYLSKPSVINSKL 489
GLMPGMPG R+MPGMPGIDNDNWE+P+TRSMPRGDMSG QTGG QSP+LSK S +NS+L
Sbjct: 6 GLMPGMPGTRRMPGMPGIDNDNWEMPKTRSMPRGDMSGMQTGGHSQSPFLSKTSTVNSRL 185
Query: 490 LPQGSSGLISGKNSALVLGGGTPSAL-PSNIVSGTEPAPQIPSPVKPVSAASPEKPQAPA 548
LPQGS+G+I G++SALV G G PSA P N+ EP PQIPSPVK VSA EKPQ PA
Sbjct: 186 LPQGSAGIIRGRSSALVHGAGAPSAARPPNLGFSAEPTPQIPSPVKAVSAIPAEKPQPPA 365
Query: 549 VKLNIDDLHRKTVSLLEEYFNVRLL 573
KLN D+L RKTVSLLEEYFNVRLL
Sbjct: 366 AKLNFDELQRKTVSLLEEYFNVRLL 440
>BI424738 similar to GP|7576200|emb protein synthesis initiation factor-like
{Arabidopsis thaliana}, partial (5%)
Length = 310
Score = 68.2 bits (165), Expect = 1e-11
Identities = 36/93 (38%), Positives = 54/93 (57%), Gaps = 7/93 (7%)
Frame = +3
Query: 314 AICHFFNTIGKQLDESPKSRRINDMYFGRLKELSTNPQLAPRMKFMVRDVIDLRASNWVP 373
A+C +TIG+ +D PK++ D YF ++ LS N L+ R++FM++DVIDLR + W
Sbjct: 3 ALCKLMSTIGEMIDH-PKAKEHMDAYFEMMRSLSNNMNLSSRLRFMLKDVIDLRKNKWQQ 179
Query: 374 RREEIKAKTISEIHDEAEK-------NLGLRPG 399
RR+ K I E+H +A + LG PG
Sbjct: 180 RRKVEGPKKIEEVHRDASQERLAQASRLGRGPG 278
>TC225113 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protein, partial
(22%)
Length = 793
Score = 63.5 bits (153), Expect = 3e-10
Identities = 32/103 (31%), Positives = 59/103 (57%)
Frame = +1
Query: 553 IDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVA 612
++D K + LLEEY + ++ EA QC+ +L P ++ EVVK+A+ + ++K R +
Sbjct: 109 VEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDR---ML 279
Query: 613 NLIEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNFG 655
+L++ F++ ++T + G LDD+ +D+P A FG
Sbjct: 280 DLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFG 408
>TC225131 similar to UP|Q9FMK4 (Q9FMK4) Topoisomerase-like protein, partial
(47%)
Length = 1421
Score = 62.4 bits (150), Expect = 7e-10
Identities = 31/103 (30%), Positives = 60/103 (58%)
Frame = +2
Query: 553 IDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVA 612
++D K + LLEEY + ++ EA QC+ +L P ++ EVVK+A+ + ++K + + +
Sbjct: 698 VEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEK---KNDHML 868
Query: 613 NLIEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNFG 655
+L++ F++ ++T + G LDD+ +D+P A FG
Sbjct: 869 DLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFG 997
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Frame = +2
Query: 539 ASPEKPQAPAVKLNIDDLHRK----TVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVK 594
AS KP ++ D+ RK +V+++ EYF + E ++ +E+L AP Y+P +K
Sbjct: 155 ASLTKPATEDGEIQEDEKVRKYKKESVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLK 334
Query: 595 EAISLGLDKSPPRVEPVANLIEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNF 654
+ I+L +D+ E + L+ L +I + DI G ++ +D +D+ A N
Sbjct: 335 KLITLAMDRKNREKEMASVLLSALHI-EIFSTEDIVNGFVMLLESAEDTALDILDASNEL 511
Query: 655 GEIIGKLVL 663
+ + V+
Sbjct: 512 ALFLARAVI 538
>TC228434 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protein, partial
(34%)
Length = 1078
Score = 60.8 bits (146), Expect = 2e-09
Identities = 31/102 (30%), Positives = 58/102 (56%)
Frame = +2
Query: 553 IDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVA 612
++D K + LLEEY + ++ EA QC+ +L P ++ EVVK+A+ + ++K R +
Sbjct: 347 VEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDR---ML 517
Query: 613 NLIEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNF 654
+L++ F++ ++T + G LDD+ +D+P A F
Sbjct: 518 DLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNANEKF 643
>TC219177 similar to UP|Q76E23 (Q76E23) Eukaryotic translation initiation
factor 4G, partial (9%)
Length = 1175
Score = 56.2 bits (134), Expect = 5e-08
Identities = 39/157 (24%), Positives = 74/157 (46%), Gaps = 8/157 (5%)
Frame = +1
Query: 534 KPVSAASPEKPQAPAVKLNI--DDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPE 591
KPV + P + Q A +I + L +++ + EY++ R ++E + C+++L +P +HP
Sbjct: 211 KPVVTSPPARTQGTAASQSISPERLQDMSMAAIREYYSARDVNEVVLCIKDLNSPGFHPS 390
Query: 592 VVKEAISLGLDKSPPRVEPVANLIEYLFTKKI------LTARDIGTGCLLFASLLDDIGI 645
+V SL + S R + +L+ L K + L + G S L+D
Sbjct: 391 MV----SLWVTDSFERKDNERDLLAQLLVKVVKSQDGPLGQAQLIKGFESVLSTLEDAVN 558
Query: 646 DLPKAPNNFGEIIGKLVLSAGLDFKVVKEILKKVGDD 682
D PKAP G + K + + K + ++ + G++
Sbjct: 559 DAPKAPEFLGRVFAKAITEHVVSXKEIGRLIHEGGEE 669
>TC210266 similar to UP|Q8LDN5 (Q8LDN5) Topoisomerase-like protein, partial
(30%)
Length = 860
Score = 47.0 bits (110), Expect = 3e-05
Identities = 27/111 (24%), Positives = 54/111 (48%)
Frame = +3
Query: 553 IDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVA 612
+DD + VS++EEYF+ +D A + EL + Y+P +K S+ +D+ E +
Sbjct: 525 LDDFKKAVVSIIEEYFSNGDVDLAASDLRELGSNKYYPYFIKRLGSMAMDRHDKEKEMAS 704
Query: 613 NLIEYLFTKKILTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVL 663
L+ L+ +++ I G + DD+ +D+ A + + + V+
Sbjct: 705 VLLSALYA-DVISPAQIRDGFFMLIESADDLAVDILDAVDILALFLARAVV 854
>TC226603 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
(36%)
Length = 809
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Frame = +3
Query: 374 RREEIKA---KTISEIHDEAEKNLGLRPGATAGMRNTRVTGVQGNTGAGGFPIARPGTGG 430
RR E +A K + + +N G PG G G GAGG P PG GG
Sbjct: 102 RRAEAQAAYEKAKKQEQSSSSRNPGGMPGGFPG----------GFPGAGGMPGGFPGAGG 251
Query: 431 LMPGMPGARKMPGMPGIDNDNWEVPRTRSMPRG-DMSGAQTGGRGQSPYLSKPSVINS 487
+ G PGA MPG P MP G +G G S LS P ++ S
Sbjct: 252 MPGGFPGAGGMPG---------GFPGAGGMPGGFPGAGGMPGNIDFSKILSDPELMAS 398
>TC226604 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
(82%)
Length = 1427
Score = 40.4 bits (93), Expect = 0.003
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Frame = +2
Query: 374 RREEIKA---KTISEIHDEAEKNLGLRPGATAGMRNTRVTGVQGN-TGAGGFPIARPGTG 429
RR E +A K + + +N G PG G G+ G GAGG P PG G
Sbjct: 842 RRAEAQAAYEKAKKQEQSSSSRNPGGMPGGFPG-------GMPGGFPGAGGMPGGFPGAG 1000
Query: 430 GLMPGMPGARKMP--GMPGIDNDNWEVPRTRSMPRGDMSGAQTGGRGQSPYLSKPSVI 485
G+ G PGA MP G PG G M G G S LS P ++
Sbjct: 1001GMPGGFPGAGGMPGGGFPG---------------AGGMPGGVPGNIDFSKILSDPELM 1129
>TC211827 similar to UP|Q76E23 (Q76E23) Eukaryotic translation initiation
factor 4G, partial (6%)
Length = 542
Score = 39.7 bits (91), Expect = 0.005
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 556 LHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVKEAISLGLDKSPPRVEPVANLI 615
L ++S + EY++ R +E CV++L +P++HP +V ++ ++ + +A L+
Sbjct: 217 LRDMSLSAIREYYSARDENELAVCVKDLNSPSFHPSMVSLWVTDSFERKDAERDLLAKLL 396
Query: 616 EYLFTKK--ILTARDIGTGCLLFASLLDDIGIDLPKAPNNFGEI 657
L + L + G S L+D D P+A G I
Sbjct: 397 VNLVKSQHGTLNQDQLIKGFESVLSTLEDAVNDAPRAAEFLGRI 528
>TC208119 similar to GB|AAL25838.1|23379334|AY057393 one-helix protein
{Arabidopsis thaliana;} , partial (49%)
Length = 662
Score = 37.7 bits (86), Expect = 0.018
Identities = 26/75 (34%), Positives = 33/75 (43%), Gaps = 8/75 (10%)
Frame = +3
Query: 512 PSALPSNIVSGTEPAPQIPSPVKPVSAASPEK--PQAPAVKLNID------DLHRKTVSL 563
P A P S + APQ+ P P SP PQ PA + D + R+
Sbjct: 120 PVAPPIREPSSSSSAPQLQKPTLPSQPPSPSSSPPQKPATVVGDDKNVITLEFQRQKAKE 299
Query: 564 LEEYFNVRLLDEALQ 578
L+EYF + LDEA Q
Sbjct: 300 LQEYFKQKKLDEADQ 344
>BM142773 similar to GP|10177300|db topoisomerase-like protein {Arabidopsis
thaliana}, partial (16%)
Length = 403
Score = 36.2 bits (82), Expect = 0.052
Identities = 20/68 (29%), Positives = 34/68 (49%)
Frame = +1
Query: 535 PVSAASPEKPQAPAVKLNIDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPEVVK 594
P A E+ + ++ D+ ++ LL EY + EA +C+ EL +H EVVK
Sbjct: 139 PHHAELVERRWGGSTHISFVDVKKRIADLLREYADSGDTLEACRCIRELGVSFFHHEVVK 318
Query: 595 EAISLGLD 602
A+ L ++
Sbjct: 319 RALVLAME 342
>BU965053 similar to SP|Q9FPQ6|GP1_C Vegetative cell wall protein gp1
precursor (Hydroxyproline-rich glycoprotein 1)., partial
(3%)
Length = 450
Score = 35.4 bits (80), Expect = 0.089
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -3
Query: 477 PYLSKPSVINSKLLPQGSSGLISGKNSALVLGGGTPSALPSNIVSGTEPAPQIPSP 532
P L S++N K L SS I N+ L G ++ +++++ T P+P +PSP
Sbjct: 328 PLLPFTSLLNPKTLTPFSSPRIRNPNATLTENTGLEHSITAHLINLTPPSPSLPSP 161
>TC227567 similar to UP|Q9MA20 (Q9MA20) T5E21.13, partial (15%)
Length = 1168
Score = 35.0 bits (79), Expect = 0.12
Identities = 53/235 (22%), Positives = 93/235 (39%), Gaps = 11/235 (4%)
Frame = +1
Query: 330 PKSRRINDMYFGRLKE--LSTNPQLAPRMKFMVRDVIDLRASNWVPRREEIKAKTISEIH 387
PK + + F +++E L+ + +++ + + R D+ + +KA+ I +I+
Sbjct: 433 PKYKEQKERMFAKIRETTLAADDEISRNIVGLARTRPDIFGTTEEEVSNAVKAE-IEKIN 609
Query: 388 DEAEKNLGLRPGATAGMRNTRVTGVQGNTGAGGFPIAR---------PGTGGLMPGMPGA 438
DE K + + G T + T + N G+ A P PGMP
Sbjct: 610 DEQPKQV-IWDGHTGSIGRTANQAMSQNIGSEDQNDASNNEAKNLLGPAAPPPRPGMPSI 786
Query: 439 RKMPGMPGIDNDNWEVPRTRSMPRGDMSGAQTGGRGQSPYLSKPSVINSKLLPQGSSGLI 498
R +P PG+ + VP S P +G P +P + + + P +
Sbjct: 787 RPLPPPPGLALNLPRVPVQYSAP-------HSGALPMPP--PRPMMPSIRPAPPPPMPMN 939
Query: 499 SGKNSALVLGGGTPSALPSNIVSGTEPAPQIPSPVKPVSAASPEKPQAPAVKLNI 553
+G+ S V+ G P PS ++ IP P P S +P P V L++
Sbjct: 940 TGQQS--VMAGQPPPMHPSIPMNN----QGIPIPPPPGSQFTPVPVPRPFVPLSV 1086
>TC209202 UP|Q84P43 (Q84P43) Protein kinase Pti1, partial (27%)
Length = 465
Score = 32.7 bits (73), Expect = 0.58
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 516 PSNIVSGTEPAPQIPSPVKPVSAASPEKPQAPAVKLNIDDLHRKT 560
P N G + ++ +PVKP + +P +APA L++D+L KT
Sbjct: 247 PRNYGDGNQKGSKVSAPVKPETQKAPPPIEAPA--LSLDELKEKT 375
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.135 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,605,825
Number of Sequences: 63676
Number of extensions: 372456
Number of successful extensions: 2283
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2231
length of query: 720
length of database: 12,639,632
effective HSP length: 104
effective length of query: 616
effective length of database: 6,017,328
effective search space: 3706674048
effective search space used: 3706674048
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC140546.1