TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140068.13 + phase: 0 
         (233 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC217271 weakly similar to UP|RU2B_HUMAN (P08579) U2 small nucle...   299  8e-82
TC217269 similar to UP|Q41499 (Q41499) Spliceosomal protein, par...   281  1e-76
TC227789 similar to UP|Q41498 (Q41498) U1snRNP-specific protein,...   275  2e-74
TC217270 weakly similar to UP|RU2B_HUMAN (P08579) U2 small nucle...   258  1e-69
BF070240                                                              108  2e-24
TC206786                                                               55  4e-08
TC206681 similar to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, part...    51  5e-07
TC217226 similar to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, part...    50  9e-07
TC217228 similar to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, part...    49  1e-06
TC225577 similar to UP|Q9M6E4 (Q9M6E4) Poly(A)-binding protein (...    44  5e-05
TC206678 homologue to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, pa...    43  1e-04
TC219707 weakly similar to GB|AAF55483.4|28381336|AE003720 CG312...    43  1e-04
TC229899 similar to UP|Q9LIC8 (Q9LIC8) Emb|CAA64867.1, partial (...    41  4e-04
TC217248 homologue to UP|PM14_ARATH (Q9FMP4) Pre-mRNA branch sit...    41  4e-04
TC210995 similar to UP|Q6ID24 (Q6ID24) At4g12630, partial (68%)        41  5e-04
BE824455                                                               40  0.001
TC209326 similar to UP|O80484 (O80484) T12M4.6, partial (28%)          40  0.001
TC231569 similar to UP|Q9LIC8 (Q9LIC8) Emb|CAA64867.1, partial (...    38  0.003
TC227112 homologue to UP|Q8L5G3 (Q8L5G3) Proline rich protein 3 ...    38  0.004
BQ473702                                                               38  0.004

>TC217271 weakly similar to UP|RU2B_HUMAN (P08579) U2 small nuclear
           ribonucleoprotein B", partial (48%)
          Length = 744

 Score =  299 bits (765), Expect = 8e-82
 Identities = 151/182 (82%), Positives = 161/182 (87%)
 Frame = +3

Query: 52  RGQAWVCFSEVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQE 111
           RGQAWV  SEVTA  NAVRQM  FP Y+KPMRIQYAKTKSDCIAKEEG++VPREKKK  E
Sbjct: 3   RGQAWVXXSEVTAXXNAVRQMXXFPXYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKXXE 182

Query: 112 EKAEKKKYADESKQSAVPNGGTHGASNGGSTASFRPGSGAQEAAAPNNILFIENLPYETT 171
           EKAE+K+ A+E++QS V NG TH ASNGG TASFR G GAQE AAPNNILFIENLP+ETT
Sbjct: 183 EKAERKRRAEEAQQSGVANG-THSASNGGPTASFRQGPGAQETAAPNNILFIENLPHETT 359

Query: 172 GRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFA 231
           GRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFED+ QSSMAMQAL GFKITPQNPMII FA
Sbjct: 360 GRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFA 539

Query: 232 KK 233
           KK
Sbjct: 540 KK 545


>TC217269 similar to UP|Q41499 (Q41499) Spliceosomal protein, partial (51%)
          Length = 762

 Score =  281 bits (720), Expect = 1e-76
 Identities = 143/167 (85%), Positives = 151/167 (89%)
 Frame = +2

Query: 67  NAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYADESKQS 126
           NAVRQMQNF   +KPMRI YAKTKSDCIAKEEGSFVPREKKKKQEEKAE+K+  +E++QS
Sbjct: 2   NAVRQMQNFXXXDKPMRIHYAKTKSDCIAKEEGSFVPREKKKKQEEKAERKRRVEEAQQS 181

Query: 127 AVPNGGTHGASNGGSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFK 186
            V NG TH ASNGG TASFR G GAQEAAAPNNILFIENLP+ETTGRMLEMLFEQYPGFK
Sbjct: 182 GVANG-THSASNGGPTASFRQGPGAQEAAAPNNILFIENLPHETTGRMLEMLFEQYPGFK 358

Query: 187 EVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAKK 233
           EVRLIEAKPGIAFVDFED+ QSSMAMQAL GFKITPQNPMII FAKK
Sbjct: 359 EVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 499


>TC227789 similar to UP|Q41498 (Q41498) U1snRNP-specific protein, U1A,
           partial (89%)
          Length = 1000

 Score =  275 bits (702), Expect = 2e-74
 Identities = 134/233 (57%), Positives = 179/233 (76%), Gaps = 4/233 (1%)
 Frame = +1

Query: 5   DIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFSEVTA 64
           +IP + TIYI NLNEKIK DELK+SL  +F+Q+G+IL+++A KT K +GQAWV F + ++
Sbjct: 76  EIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASS 255

Query: 65  ASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYADESK 124
           ASNA+RQMQ FPFY+KPMRIQYAKTKSD IAK +G+FVPREK+K+ ++KA+K+K   ++ 
Sbjct: 256 ASNALRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDDKAKKRKDQHDAN 435

Query: 125 QSAVPNGGTHGASNGGSTASFRPGSG----AQEAAAPNNILFIENLPYETTGRMLEMLFE 180
            + +     +  + G + A   PG       +  A PNNILFI+NLP ++T  ML+MLF 
Sbjct: 436 LAGMGLNPAYAGAYGAAPAIAYPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFL 615

Query: 181 QYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAKK 233
           QYPGFKEVR++E KPGIAFV++ D+ QS++AMQ LQGFKITPQNPM+I +AKK
Sbjct: 616 QYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 774


>TC217270 weakly similar to UP|RU2B_HUMAN (P08579) U2 small nuclear
           ribonucleoprotein B", partial (46%)
          Length = 570

 Score =  258 bits (660), Expect = 1e-69
 Identities = 126/143 (88%), Positives = 136/143 (94%)
 Frame = +3

Query: 1   MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFS 60
           MLSGDIPPNQTIYIKN+NEK+KKDELKRSLYCLFSQYGRILD+IALKTPKLRGQAWVCFS
Sbjct: 81  MLSGDIPPNQTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFS 260

Query: 61  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYA 120
           EVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAE+K+  
Sbjct: 261 EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAERKRRV 440

Query: 121 DESKQSAVPNGGTHGASNGGSTA 143
           +E++QS V N GTH ASNGG T+
Sbjct: 441 EEAQQSDVAN-GTHSASNGGPTS 506


>BF070240 
          Length = 424

 Score =  108 bits (270), Expect = 2e-24
 Identities = 49/78 (62%), Positives = 65/78 (82%)
 Frame = +2

Query: 5   DIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFSEVTA 64
           +IP + TIYI NLNEKIK DELK+SL  +F+Q+G+IL+++A KT K +GQAWV F + ++
Sbjct: 41  EIPQSNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASS 220

Query: 65  ASNAVRQMQNFPFYEKPM 82
           ASNA+RQMQ FPFY+KPM
Sbjct: 221 ASNALRQMQGFPFYDKPM 274



 Score = 28.5 bits (62), Expect = 2.7
 Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 6/67 (8%)
 Frame = +2

Query: 158 NNILFIENL----PYETTGRMLEMLFEQYPGFKEVRLIEA--KPGIAFVDFEDDGQSSMA 211
           +N ++I NL      +   + L  +F Q+    EV   +     G A+V FED   +S A
Sbjct: 53  SNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNA 232

Query: 212 MQALQGF 218
           ++ +QGF
Sbjct: 233 LRQMQGF 253


>TC206786 
          Length = 847

 Score = 54.7 bits (130), Expect = 4e-08
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
 Frame = +1

Query: 124 KQSAVPNGGTHGASNGGSTASFRPGS-----GAQEAAAPNNILFIENLPYETTGRMLEML 178
           K+   P G  +G  +    +S RP S     G   +AA +NILF+  LP + T R +  L
Sbjct: 286 KRDTTPLGINNGVPD---VSSERPASKSSYDGLPISAADSNILFVGGLPKDCTRREVGHL 456

Query: 179 FEQYPGFKEVRLIEAKP--------GIAFVDFEDDGQSSMAMQALQGFKITPQNP 225
           F  + G+K++R++  +P         + FV+F D   +  A++ LQG+K   + P
Sbjct: 457 FRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSNCALTALETLQGYKFDDKKP 621


>TC206681 similar to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, partial (60%)
          Length = 1222

 Score = 50.8 bits (120), Expect = 5e-07
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
 Frame = +2

Query: 131 GGTHGASNGGSTASFRPGSGAQEAAAP-----------NNILFIENLPYETTGRMLEMLF 179
           GG H  +  G   ++        A+ P           ++ L++E LP ++T R +  +F
Sbjct: 452 GGGHDLARNGRNVNYGGQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIF 631

Query: 180 EQYPGFKEVRLIEAKPG--------IAFVDFEDDGQSSMAMQALQGFKITPQNP 225
             + G++EVRL+  +          + FVDF +   ++ A+ ALQG+K+   NP
Sbjct: 632 RPFVGYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNP 793


>TC217226 similar to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, partial (36%)
          Length = 1163

 Score = 50.1 bits (118), Expect = 9e-07
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
 Frame = +2

Query: 135 GASNGGSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI--- 191
           G S+G +  S  P +         + LF+E LP   T R +  +F  + G+KEVRL+   
Sbjct: 35  GLSSGRADHSLPPDA--------TSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKE 190

Query: 192 EAKPG-----IAFVDFEDDGQSSMAMQALQGFK 219
             +PG     + FVDF     ++ AM+ALQG+K
Sbjct: 191 SRQPGGDPLVLCFVDFMSPAHAATAMEALQGYK 289


>TC217228 similar to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, partial (36%)
          Length = 698

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
 Frame = +1

Query: 135 GASNGGSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI--- 191
           G S+G +  S  P +         + LF+E LP   T R +  +F  + G+KEVRL+   
Sbjct: 262 GLSSGRTDHSLPPDA--------TSTLFVEGLPPNCTRREVAHIFRPFVGYKEVRLVSKE 417

Query: 192 EAKPG-----IAFVDFEDDGQSSMAMQALQGFK 219
             +PG     + FVDF     ++ AM+ALQG+K
Sbjct: 418 SRQPGGDPLVLCFVDFLSPAHAATAMEALQGYK 516


>TC225577 similar to UP|Q9M6E4 (Q9M6E4) Poly(A)-binding protein (Fragment),
           partial (68%)
          Length = 1180

 Score = 44.3 bits (103), Expect = 5e-05
 Identities = 28/92 (30%), Positives = 46/92 (49%), Gaps = 2/92 (2%)
 Frame = +3

Query: 12  IYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPK--LRGQAWVCFSEVTAASNAV 69
           +YIKNL++ +  +EL      LFS++G I     ++ P    RG  +V FS    A+ A+
Sbjct: 36  LYIKNLDDSVGDEELME----LFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRAL 203

Query: 70  RQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSF 101
            +M       KP+ +  A+ K D  A+ +  F
Sbjct: 204 GEMNGKMVAGKPLYVALAQRKEDRRARLQAQF 299


>TC206678 homologue to UP|Q8H0P8 (Q8H0P8) RNA-binding protein, partial (32%)
          Length = 635

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 22/67 (32%), Positives = 37/67 (54%), Gaps = 8/67 (11%)
 Frame = +2

Query: 167 PYETTGRMLEMLFEQYPGFKEVRLIEAKPG--------IAFVDFEDDGQSSMAMQALQGF 218
           P ++T R +  +F  + G++EVRL+  +          + FVDF +   ++ AM ALQG+
Sbjct: 2   PSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQGY 181

Query: 219 KITPQNP 225
           K+   NP
Sbjct: 182 KVDELNP 202


>TC219707 weakly similar to GB|AAF55483.4|28381336|AE003720 CG31243-PE
           {Drosophila melanogaster;} , partial (3%)
          Length = 673

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 23/64 (35%), Positives = 37/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 155 AAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG-IAFVDFEDDGQSSMAMQ 213
           + P   LF+ NL      + L  +F +YPGF ++++       +AFVDF+D G S+ A+ 
Sbjct: 98  STPCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALN 277

Query: 214 ALQG 217
           +LQG
Sbjct: 278 SLQG 289


>TC229899 similar to UP|Q9LIC8 (Q9LIC8) Emb|CAA64867.1, partial (26%)
          Length = 736

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +1

Query: 152 QEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI---EAKPGIAFVDFEDDGQS 208
           Q+  +  N LF+  LP +   R +  LF + PGF   +L     A   +AF  F +   +
Sbjct: 241 QDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSA 420

Query: 209 SMAMQALQGFKITPQNPMIIN 229
             A+ AL G K  PQ   +++
Sbjct: 421 MAALHALNGVKFDPQTGSVLH 483


>TC217248 homologue to UP|PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like
           protein, partial (98%)
          Length = 699

 Score = 41.2 bits (95), Expect = 4e-04
 Identities = 20/75 (26%), Positives = 40/75 (52%), Gaps = 2/75 (2%)
 Frame = +1

Query: 158 NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKP--GIAFVDFEDDGQSSMAMQAL 215
           N +L++ NLP+  T   +  +F +Y   +++R+   K   G AFV +ED   +  A+  L
Sbjct: 124 NRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHL 303

Query: 216 QGFKITPQNPMIINF 230
            GF +  +  +++ +
Sbjct: 304 SGFNVANRYLIVLYY 348


>TC210995 similar to UP|Q6ID24 (Q6ID24) At4g12630, partial (68%)
          Length = 666

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 27/85 (31%), Positives = 47/85 (54%)
 Frame = +2

Query: 7   PPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFSEVTAAS 66
           PP++ +++ NL+  I ++EL       F +YG  L+ +A +    R  A++ F     A 
Sbjct: 350 PPSRHLWVGNLSHNIVEEELAHH----FLRYGP-LENVAFQPG--RSYAFINFRMDEDAI 508

Query: 67  NAVRQMQNFPFYEKPMRIQYAKTKS 91
           +A+R +Q FP    P+RI++AK  S
Sbjct: 509 DALRALQGFPLAGNPLRIEFAKAVS 583



 Score = 38.1 bits (87), Expect = 0.003
 Identities = 30/97 (30%), Positives = 46/97 (46%), Gaps = 2/97 (2%)
 Frame = +2

Query: 138 NGGSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG- 196
           N G+  S R    +     P+  L++ NL +      L   F +Y   + V     +PG 
Sbjct: 296 NRGNGISGRDNRNSNSNNPPSRHLWVGNLSHNIVEEELAHHFLRYGPLENVAF---QPGR 466

Query: 197 -IAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAK 232
             AF++F  D  +  A++ALQGF +   NP+ I FAK
Sbjct: 467 SYAFINFRMDEDAIDALRALQGFPLA-GNPLRIEFAK 574


>BE824455 
          Length = 596

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 24/59 (40%), Positives = 34/59 (56%), Gaps = 2/59 (3%)
 Frame = -1

Query: 161 LFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG--IAFVDFEDDGQSSMAMQALQG 217
           LFI NL    T   L+  F  Y GF  V++  ++ G  +AFVDFE+  Q++  M+ LQG
Sbjct: 461 LFIANLGPNCTEDELKQAFSAYTGFNMVKM-RSRGGMPVAFVDFEETHQAAKVMEELQG 288


>TC209326 similar to UP|O80484 (O80484) T12M4.6, partial (28%)
          Length = 1287

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 26/88 (29%), Positives = 44/88 (49%), Gaps = 7/88 (7%)
 Frame = +1

Query: 8   PNQTIYIKNLNEKIKKDELKRSLYCLF-SQYGRI------LDIIALKTPKLRGQAWVCFS 60
           P   +YIKNL     KD +    Y +F S +G I      L +  ++  ++RGQA++ F 
Sbjct: 337 PAPVLYIKNL----AKDVIADDFYFIFGSLFGSIDAAKSGLQVKLMQEGRMRGQAFITFP 504

Query: 61  EVTAASNAVRQMQNFPFYEKPMRIQYAK 88
            +  A +A+  +  +    KPM IQ+ +
Sbjct: 505 SIELAHHALNLVNGYVLKGKPMIIQFGR 588


>TC231569 similar to UP|Q9LIC8 (Q9LIC8) Emb|CAA64867.1, partial (28%)
          Length = 605

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 23/59 (38%), Positives = 34/59 (56%), Gaps = 2/59 (3%)
 Frame = +1

Query: 161 LFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG--IAFVDFEDDGQSSMAMQALQG 217
           LFI NL    T   L+  F  Y GF  V++  ++ G  +AFVDFE+  Q++  ++ LQG
Sbjct: 16  LFIANLGPNCTEDELKQAFSVYTGFNMVKM-RSRGGMPVAFVDFEETDQAAKVVEELQG 189


>TC227112 homologue to UP|Q8L5G3 (Q8L5G3) Proline rich protein 3 (Fragment),
           partial (78%)
          Length = 2000

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 20/62 (32%), Positives = 33/62 (52%), Gaps = 1/62 (1%)
 Frame = +1

Query: 157 PNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLI-EAKPGIAFVDFEDDGQSSMAMQAL 215
           P N LFI NL        +  LF   PGFK+++++ + +  + F++FED   ++     L
Sbjct: 403 PCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNL 582

Query: 216 QG 217
           QG
Sbjct: 583 QG 588


>BQ473702 
          Length = 403

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +3

Query: 161 LFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKI 220
           +++ NL    T R LE  F  +   + V +    PG AF+DF+D   +  A++ L GF  
Sbjct: 42  VYVGNLDSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGFSS 221

Query: 221 T 221
           T
Sbjct: 222 T 224


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.315    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,325,129
Number of Sequences: 63676
Number of extensions: 94623
Number of successful extensions: 4004
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of query: 233
length of database: 12,639,632
effective HSP length: 94
effective length of query: 139
effective length of database: 6,654,088
effective search space: 924918232
effective search space used: 924918232
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 57 (26.6 bits)