BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140030.4 - phase: 0 /pseudo
(148 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215588 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete 301 8e-83
TC215589 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, parti... 300 2e-82
TC215587 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete 281 1e-76
TC206527 homologue to UP|Q84L80 (Q84L80) Expansin precursor, par... 249 3e-67
TC226244 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (97%) 247 2e-66
TC226245 homologue to UP|Q9FNT0 (Q9FNT0) Expansin, partial (92%) 239 4e-64
TC226247 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (93%) 238 1e-63
TC207122 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (87%) 231 1e-61
TC219719 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%) 231 1e-61
TC225355 homologue to UP|Q6T5H7 (Q6T5H7) Alpha-expansin 1, parti... 230 2e-61
TC216737 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%) 230 2e-61
TC225350 similar to UP|Q84UK4 (Q84UK4) Expansin, partial (95%) 227 2e-60
TC227656 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (89%) 227 2e-60
BM886535 similar to GP|29421118|db expansin {Vitis labrusca x Vi... 224 1e-59
TC204261 similar to UP|Q84L76 (Q84L76) Expansin precursor, parti... 221 1e-58
TC206297 UP|Q8GZD3 (Q8GZD3) Expansin, complete 214 2e-56
BI674356 similar to GP|21615407|em alpha-expansin 3 {Cicer ariet... 201 1e-52
TC225354 homologue to UP|Q8W5A4 (Q8W5A4) Alpha-expansin 9 (Fragm... 191 8e-50
TC230074 similar to UP|Q84L36 (Q84L36) Cell wall protein Exp1 pr... 187 2e-48
BE611473 similar to GP|11863551|emb expansin {Glycine max}, part... 156 3e-39
>TC215588 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete
Length = 1539
Score = 301 bits (771), Expect = 8e-83
Identities = 138/148 (93%), Positives = 143/148 (96%)
Frame = +2
Query: 1 MAFIGLVLVCSLTMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 60
MA IGL+L+ LTMFSS +AYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT
Sbjct: 41 MALIGLLLMGFLTMFSSAHAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 220
Query: 61 AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPL 120
AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNN+GGWCNPPL
Sbjct: 221 AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNNGGWCNPPL 400
Query: 121 QHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
QHFDLAQPVFLRIAQYKAGIVPV +RRV
Sbjct: 401 QHFDLAQPVFLRIAQYKAGIVPVSYRRV 484
>TC215589 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, partial (60%)
Length = 495
Score = 300 bits (767), Expect = 2e-82
Identities = 137/148 (92%), Positives = 142/148 (95%)
Frame = +2
Query: 1 MAFIGLVLVCSLTMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 60
MA GL+L+ LTMFSS +AYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT
Sbjct: 47 MALTGLLLLAFLTMFSSAHAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 226
Query: 61 AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPL 120
AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPN++GGWCNPPL
Sbjct: 227 AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNDNGGWCNPPL 406
Query: 121 QHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
QHFDLAQPVFLRIAQYKAGIVPV FRRV
Sbjct: 407 QHFDLAQPVFLRIAQYKAGIVPVSFRRV 490
>TC215587 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete
Length = 1394
Score = 281 bits (718), Expect = 1e-76
Identities = 130/150 (86%), Positives = 137/150 (90%), Gaps = 2/150 (1%)
Frame = +3
Query: 1 MAFIGLVLVCSLTMFSSVYAYG--GGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGT 58
MA I L+LV L+MFSS Y YG GGW NAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 48 MAQICLLLVGLLSMFSSAYGYGYGGGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGT 227
Query: 59 NTAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNP 118
NTAALSTALFNNGLSCGSCYEIRC NDHRWCLPGSI+VTATNFCPPNNALPNN GGWCNP
Sbjct: 228 NTAALSTALFNNGLSCGSCYEIRCVNDHRWCLPGSIMVTATNFCPPNNALPNNAGGWCNP 407
Query: 119 PLQHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
P+ HFDL+QPVFLRIAQY+AGIVPV +RRV
Sbjct: 408 PMHHFDLSQPVFLRIAQYRAGIVPVSYRRV 497
>TC206527 homologue to UP|Q84L80 (Q84L80) Expansin precursor, partial (96%)
Length = 1150
Score = 249 bits (636), Expect = 3e-67
Identities = 111/143 (77%), Positives = 123/143 (85%)
Frame = +2
Query: 6 LVLVCSLTMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST 65
L + +L + + YGGGW HATFYGG DASGTMGGACGYGNLYSQGYGTNTAALST
Sbjct: 98 LFFLLNLCLRGTYADYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 277
Query: 66 ALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPLQHFDL 125
ALFNNG+SCGSCYE++C D +WCLPGSI+VTATNFCPPN AL NN+GGWCNPPLQHFDL
Sbjct: 278 ALFNNGMSCGSCYEMKCDTDPKWCLPGSIIVTATNFCPPNFALANNNGGWCNPPLQHFDL 457
Query: 126 AQPVFLRIAQYKAGIVPVDFRRV 148
A+P FL+IAQYKAGIVPV FRRV
Sbjct: 458 AEPAFLQIAQYKAGIVPVSFRRV 526
>TC226244 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (97%)
Length = 821
Score = 247 bits (630), Expect = 2e-66
Identities = 109/143 (76%), Positives = 124/143 (86%)
Frame = +3
Query: 6 LVLVCSLTMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST 65
+VL + + + YGGGW +AHATFYGG DASGTMGGACGYGNLYSQGYGT+T ALST
Sbjct: 114 IVLFVNTNLQGATADYGGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTVALST 293
Query: 66 ALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPLQHFDL 125
ALFNNGLSCGSCYE+RC +D RWC PGSI VTATNFCPPN +LPNN+GGWCNPPLQHFD+
Sbjct: 294 ALFNNGLSCGSCYEMRCDDDPRWCKPGSITVTATNFCPPNPSLPNNNGGWCNPPLQHFDM 473
Query: 126 AQPVFLRIAQYKAGIVPVDFRRV 148
A+P FL+IA+Y+AGIVPV FRRV
Sbjct: 474 AEPAFLQIAEYRAGIVPVAFRRV 542
>TC226245 homologue to UP|Q9FNT0 (Q9FNT0) Expansin, partial (92%)
Length = 1220
Score = 239 bits (610), Expect = 4e-64
Identities = 109/149 (73%), Positives = 126/149 (84%), Gaps = 1/149 (0%)
Frame = +3
Query: 1 MAFIGLVLVCSLTMFSS-VYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 59
+A + L++V + M + A G W +AHATFYGG DASGTMGGACGYGNLYSQGYGT+
Sbjct: 81 IALVTLIVVLFVNMNNQGATADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTD 260
Query: 60 TAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPP 119
T ALSTALFNNGLSCGSCYE+RC +D RWC PGSI VTATNFCPPN +LPNN+GGWCNPP
Sbjct: 261 TVALSTALFNNGLSCGSCYEMRCDDDPRWCKPGSITVTATNFCPPNPSLPNNNGGWCNPP 440
Query: 120 LQHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
LQHFD+A+P FL+IA+Y+AGIVPV FRRV
Sbjct: 441 LQHFDMAEPAFLQIAEYRAGIVPVAFRRV 527
>TC226247 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (93%)
Length = 1376
Score = 238 bits (606), Expect = 1e-63
Identities = 107/146 (73%), Positives = 123/146 (83%), Gaps = 5/146 (3%)
Frame = +3
Query: 8 LVCSLTMFSSVYAYG-----GGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAA 62
LV + +F ++ +G GGW HATFYGG DASGTMG ACGYGNLYSQGYGTNTAA
Sbjct: 81 LVLLIFLFVEMHFHGATADYGGWQGGHATFYGGGDASGTMGSACGYGNLYSQGYGTNTAA 260
Query: 63 LSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPLQH 122
LSTALFNNGLSCG+CYE++C +D RWC PG+I+VTATNFCPPN AL NN+GGWCNPPLQH
Sbjct: 261 LSTALFNNGLSCGACYEMKCDDDPRWCKPGTIIVTATNFCPPNFALANNNGGWCNPPLQH 440
Query: 123 FDLAQPVFLRIAQYKAGIVPVDFRRV 148
FD+A+P FL+IAQY+AGIVPV FRRV
Sbjct: 441 FDMAEPAFLQIAQYRAGIVPVAFRRV 518
>TC207122 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (87%)
Length = 1348
Score = 231 bits (589), Expect = 1e-61
Identities = 110/150 (73%), Positives = 122/150 (81%), Gaps = 2/150 (1%)
Frame = +1
Query: 1 MAFIGLVLVCSLTMFSSVYAY--GGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGT 58
M +G L+ L+M S Y GGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGT
Sbjct: 88 MVHLGFFLLGCLSMISYANGYVSNGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGT 267
Query: 59 NTAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNP 118
NTAALSTALFNNGLSCGSCY+I+CAND +WCL G+IVVTATNFCPP GGWC+P
Sbjct: 268 NTAALSTALFNNGLSCGSCYQIKCANDPQWCLRGTIVVTATNFCPP--------GGWCDP 423
Query: 119 PLQHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
P HFDL+QPVF +IAQY+AGIVPV +RRV
Sbjct: 424 PNHHFDLSQPVFQQIAQYRAGIVPVVYRRV 513
>TC219719 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%)
Length = 1007
Score = 231 bits (588), Expect = 1e-61
Identities = 107/150 (71%), Positives = 123/150 (81%), Gaps = 2/150 (1%)
Frame = +1
Query: 1 MAFIGLVLVCSLTMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 60
+A + + V + VY GG W +AHATFYGGSDASGTMGGACGYGNLYSQGYG NT
Sbjct: 67 IASLASLFVATSARIPGVYT-GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNT 243
Query: 61 AALSTALFNNGLSCGSCYEIRCANDHRWCLPG--SIVVTATNFCPPNNALPNNDGGWCNP 118
AALSTALFNNGLSCG+C+EI+C D RWC PG SI++TATNFCPPN ALPN++GGWCNP
Sbjct: 244 AALSTALFNNGLSCGACFEIKCDQDPRWCNPGSPSILITATNFCPPNFALPNDNGGWCNP 423
Query: 119 PLQHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
P HFDLA P+FL+IAQY+AGIVPV +RRV
Sbjct: 424 PRPHFDLAMPMFLKIAQYRAGIVPVAYRRV 513
>TC225355 homologue to UP|Q6T5H7 (Q6T5H7) Alpha-expansin 1, partial (90%)
Length = 977
Score = 230 bits (586), Expect = 2e-61
Identities = 103/129 (79%), Positives = 115/129 (88%), Gaps = 2/129 (1%)
Frame = +1
Query: 22 GGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIR 81
GG W NAHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFN+GLSCG+C+EI+
Sbjct: 37 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIK 216
Query: 82 CANDHRWCLPG--SIVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAG 139
CAND +WC G SI +TATNFCPPN ALPN++GGWCNPP HFDLA P+FL+IA+Y+AG
Sbjct: 217 CANDKQWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAG 396
Query: 140 IVPVDFRRV 148
IVPV FRRV
Sbjct: 397 IVPVAFRRV 423
>TC216737 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%)
Length = 1296
Score = 230 bits (586), Expect = 2e-61
Identities = 110/155 (70%), Positives = 127/155 (80%), Gaps = 7/155 (4%)
Frame = +1
Query: 1 MAFIGLVLVCSLTMFSS-----VYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQG 55
+ FI + + SL + +S VY GG W +AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 55 IVFIHIASLVSLFVATSARIPGVYT-GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQG 231
Query: 56 YGTNTAALSTALFNNGLSCGSCYEIRCANDHRWCLPG--SIVVTATNFCPPNNALPNNDG 113
YG NTAALSTALFNNGLSCG+C+EI+C D RWC PG SI++TATNFCPPN ALPN++G
Sbjct: 232 YGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGNPSILITATNFCPPNFALPNDNG 411
Query: 114 GWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
GWCNPP HFDLA P+FL+IAQY+AGIVPV +RRV
Sbjct: 412 GWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRV 516
>TC225350 similar to UP|Q84UK4 (Q84UK4) Expansin, partial (95%)
Length = 1184
Score = 227 bits (578), Expect = 2e-60
Identities = 101/129 (78%), Positives = 115/129 (88%), Gaps = 2/129 (1%)
Frame = +3
Query: 22 GGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIR 81
GG W +AHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFN+GLSCG+C+EI+
Sbjct: 108 GGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIK 287
Query: 82 CANDHRWCLPG--SIVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAG 139
CAND +WC G SI +TATNFCPPN ALPN++GGWCNPP HFDLA P+FL+IA+Y+AG
Sbjct: 288 CANDRQWCHSGSPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAG 467
Query: 140 IVPVDFRRV 148
IVPV +RRV
Sbjct: 468 IVPVAYRRV 494
>TC227656 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (89%)
Length = 1518
Score = 227 bits (578), Expect = 2e-60
Identities = 108/149 (72%), Positives = 121/149 (80%), Gaps = 1/149 (0%)
Frame = +3
Query: 1 MAFIGLVLVCSLTMFSSVYAYG-GGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 59
MA +G +L M S V YG GGWTNAHATFYGG DASGTMGGACGYGNLYSQGYGT+
Sbjct: 114 MALLGFLLGL-FYMISHVKGYGFGGWTNAHATFYGGGDASGTMGGACGYGNLYSQGYGTD 290
Query: 60 TAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPP 119
T ALSTALFNNGLSCG+C++I+CAND +WCLPGSI+VTATNFCPP GGWC+PP
Sbjct: 291 TTALSTALFNNGLSCGACFQIKCANDPQWCLPGSIIVTATNFCPP--------GGWCDPP 446
Query: 120 LQHFDLAQPVFLRIAQYKAGIVPVDFRRV 148
HFDL+QPVF IAQY+AGIVPV +RRV
Sbjct: 447 NHHFDLSQPVFQHIAQYRAGIVPVVYRRV 533
>BM886535 similar to GP|29421118|db expansin {Vitis labrusca x Vitis
vinifera}, partial (48%)
Length = 437
Score = 224 bits (571), Expect = 1e-59
Identities = 102/128 (79%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Frame = +3
Query: 1 MAFIGLVLVCSLTMF-SSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTN 59
M +GL+LV L+ SSV A G GW +AHATFYGG DASGTMGGACGYGNLYSQGYGTN
Sbjct: 54 MVLLGLLLVGFLSQLGSSVSASGYGWMDAHATFYGGGDASGTMGGACGYGNLYSQGYGTN 233
Query: 60 TAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPP 119
TAALSTALFNNGLSCG+C+EIRC ND RWCLP S++VTATNFCPPNNALPNN GGWCNPP
Sbjct: 234 TAALSTALFNNGLSCGACFEIRCVNDQRWCLPRSVIVTATNFCPPNNALPNNAGGWCNPP 413
Query: 120 LQHFDLAQ 127
L HFDL+Q
Sbjct: 414 LHHFDLSQ 437
>TC204261 similar to UP|Q84L76 (Q84L76) Expansin precursor, partial (87%)
Length = 965
Score = 221 bits (563), Expect = 1e-58
Identities = 100/123 (81%), Positives = 111/123 (89%), Gaps = 2/123 (1%)
Frame = +2
Query: 28 AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDHR 87
AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCG+C+EI+C D R
Sbjct: 2 AHATFYGGNDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPR 181
Query: 88 WCLPG--SIVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDF 145
WC PG SIV+TATNFCPPN ALP+++GGWCNPP HFDLA P+FL+IAQYKAGIVPV +
Sbjct: 182 WCNPGSPSIVITATNFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAQYKAGIVPVSY 361
Query: 146 RRV 148
RRV
Sbjct: 362 RRV 370
>TC206297 UP|Q8GZD3 (Q8GZD3) Expansin, complete
Length = 1262
Score = 214 bits (544), Expect = 2e-56
Identities = 101/147 (68%), Positives = 119/147 (80%), Gaps = 4/147 (2%)
Frame = +1
Query: 6 LVLVCSLTMFSSVYAYG-GGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALS 64
L+ +C T+ + YA+ GWTNAHATFYGGSDASGTMGGACGYGNLY+ GYGT TAALS
Sbjct: 250 LIGLCCFTI--TTYAFSPSGWTNAHATFYGGSDASGTMGGACGYGNLYATGYGTRTAALS 423
Query: 65 TALFNNGLSCGSCYEIRC--ANDHRWCLPG-SIVVTATNFCPPNNALPNNDGGWCNPPLQ 121
TALFN+G SCG CY+I C +D RWC+ G S+ VTATNFCPPN ALPNN+GGWCNPPL+
Sbjct: 424 TALFNDGASCGQCYKIICDYKSDSRWCIKGRSVTVTATNFCPPNFALPNNNGGWCNPPLK 603
Query: 122 HFDLAQPVFLRIAQYKAGIVPVDFRRV 148
HFD+AQP + +I Y+ GIVPV F+RV
Sbjct: 604 HFDMAQPAWEKIGIYRGGIVPVLFQRV 684
>BI674356 similar to GP|21615407|em alpha-expansin 3 {Cicer arietinum},
partial (41%)
Length = 383
Score = 201 bits (511), Expect = 1e-52
Identities = 89/120 (74%), Positives = 99/120 (82%)
Frame = +1
Query: 1 MAFIGLVLVCSLTMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 60
M F+G++LV L Y GW +AHATFYGG DASGTMGGACGYGNLYSQGYGTNT
Sbjct: 31 MVFLGVLLVGFLL---GAYGDSDGWMDAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 201
Query: 61 AALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPL 120
LSTALFNNGLSCG+C+EI+C ND RWCLP ++VVTATNFCPPNNALPN+ GGWCNPPL
Sbjct: 202 VVLSTALFNNGLSCGACFEIKCVNDQRWCLPDTVVVTATNFCPPNNALPNDAGGWCNPPL 381
>TC225354 homologue to UP|Q8W5A4 (Q8W5A4) Alpha-expansin 9 (Fragment),
partial (47%)
Length = 430
Score = 191 bits (486), Expect = 8e-50
Identities = 89/126 (70%), Positives = 101/126 (79%), Gaps = 3/126 (2%)
Frame = +3
Query: 3 FIGLVLVCSL-TMFSSVYAYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTA 61
F + L C + VY+ G W +AHATFYGGSDASGTMGGACGYGNLYSQGYG NTA
Sbjct: 54 FFIISLTCMVQARIPGVYS-AGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTA 230
Query: 62 ALSTALFNNGLSCGSCYEIRCANDHRWCLPG--SIVVTATNFCPPNNALPNNDGGWCNPP 119
ALSTALFN+GLSCG+C+EI+CAND +WC G SI +TATNFCPPN ALPN++GGWCNPP
Sbjct: 231 ALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIFITATNFCPPNFALPNDNGGWCNPP 410
Query: 120 LQHFDL 125
HFDL
Sbjct: 411 RPHFDL 428
>TC230074 similar to UP|Q84L36 (Q84L36) Cell wall protein Exp1 precursor,
partial (57%)
Length = 672
Score = 187 bits (475), Expect = 2e-48
Identities = 85/127 (66%), Positives = 102/127 (79%), Gaps = 2/127 (1%)
Frame = +2
Query: 24 GWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCA 83
GWT AHATFYGG+DASGTMGGACGYGNLY QGYGT+TAALS ALFNNG +CG+C+++ C
Sbjct: 98 GWTAAHATFYGGADASGTMGGACGYGNLYQQGYGTSTAALSAALFNNGQTCGACFQLVCY 277
Query: 84 NDHRWCLPGS--IVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAGIV 141
N +C+ G+ I +TATNFCP N + N GWCNPPL HFD++QP F +IA Y+AG+V
Sbjct: 278 NS-PFCIRGAGPITITATNFCPRNGSFSANGIGWCNPPLMHFDMSQPAFTKIALYRAGVV 454
Query: 142 PVDFRRV 148
PV FRRV
Sbjct: 455 PVLFRRV 475
>BE611473 similar to GP|11863551|emb expansin {Glycine max}, partial (54%)
Length = 298
Score = 156 bits (395), Expect = 3e-39
Identities = 70/99 (70%), Positives = 82/99 (82%)
Frame = +2
Query: 45 ACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDHRWCLPGSIVVTATNFCPP 104
A GYGNLYSQ YGTNTA+L+TALFNNG++CGSCYE++C D WCL GSI+VTATN CPP
Sbjct: 2 ASGYGNLYSQCYGTNTASLTTALFNNGVNCGSCYEMKCDTDPIWCLSGSIIVTATNLCPP 181
Query: 105 NNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPV 143
N AL +N+ GWC PPLQHF+LA+ L IA YKAG+VPV
Sbjct: 182 NFALASNNCGWCTPPLQHFELAESAVLHIA*YKAGMVPV 298
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.140 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,726,430
Number of Sequences: 63676
Number of extensions: 149372
Number of successful extensions: 970
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of query: 148
length of database: 12,639,632
effective HSP length: 88
effective length of query: 60
effective length of database: 7,036,144
effective search space: 422168640
effective search space used: 422168640
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)
Medicago: description of AC140030.4