Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139853.10 + phase: 0 
         (342 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC221324                                                              262  2e-70
TC218289                                                              234  6e-62
BI893279                                                              179  2e-45
TC220774 similar to UP|CAZ_DROME (Q27294) RNA-binding protein ca...   154  6e-38
TC206339 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-li...   152  3e-37
TC217483                                                              146  1e-35
BQ627853                                                              144  8e-35
TC220069 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial ...   142  2e-34
TC209193 weakly similar to UP|O64640 (O64640) Expressed protein ...   136  1e-32
TC204890 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial ...   135  2e-32
TC225190 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_20...   129  3e-30
TC232928                                                              105  1e-29
TC205695                                                              107  6e-24
BI470238                                                              105  2e-23
TC229726 similar to GB|AAP37709.1|30725374|BT008350 At5g06570 {A...   105  3e-23
TC204048                                                              104  7e-23
BQ296335                                                              101  4e-22
TC222845                                                               90  2e-18
BI971072                                                               88  5e-18
TC225202 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_20...    88  6e-18

>TC221324 
          Length = 620

 Score =  262 bits (669), Expect = 2e-70
 Identities = 122/178 (68%), Positives = 149/178 (83%), Gaps = 1/178 (0%)
 Frame = +3

Query: 164 SVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAG-LQRIRVAGLISMQPFFGGEERTEA 222
           +VLPEN DVSKC  AGDSAGANLAH+VAVR  K+G L+ +RV GL+S+QP+FGGE RT A
Sbjct: 3   AVLPENADVSKCXXAGDSAGANLAHNVAVRVAKSGPLREVRVVGLVSIQPWFGGEARTAA 182

Query: 223 EIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLD 282
           E++ EG+ ++S ARTDW+WK FLP+GS+RDH A+NVSGPN+EDLS L+YPDTLVFVGG D
Sbjct: 183 EVKFEGAPLVSTARTDWLWKAFLPDGSDRDHGASNVSGPNSEDLSGLNYPDTLVFVGGFD 362

Query: 283 GLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFINNRVSN 340
            L DWQK+Y EWLK SGKKAQLIEY  M+H FY FP +PE+SQLI ++KDFI  R+S+
Sbjct: 363 PLQDWQKKYCEWLKKSGKKAQLIEYSTMIHAFYIFPELPESSQLISEVKDFITKRISD 536


>TC218289 
          Length = 1586

 Score =  234 bits (596), Expect = 6e-62
 Identities = 125/302 (41%), Positives = 174/302 (57%), Gaps = 5/302 (1%)
 Frame = +1

Query: 40  LLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTE-----TT 94
           L  +LD K  A A P+ GV + D  VD  + +++R++ PT  N +  G  + E     T 
Sbjct: 4   LAEYLDRKVPANAIPVEGVFSID-HVDRNAGLFYRVYLPTSGNEAQWGIRDLEKPLSTTE 180

Query: 95  SLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGET 154
            +PV++FFHGG F+  S  S  YDT CRR  R     VVSVNYRR+PE+RYP  Y+DG  
Sbjct: 181 IVPVIVFFHGGSFSHSSANSHIYDTFCRRLVRICKAAVVSVNYRRSPEHRYPCAYDDGWA 360

Query: 155 ALKFLDENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFF 214
           AL+++     +          +LAGDS+G N+ HHVAVRA +   + I V G I + P F
Sbjct: 361 ALRWVKSRAWLQSGREAKVHVYLAGDSSGGNIVHHVAVRAAE---EEIEVLGNILLHPLF 531

Query: 215 GGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDT 274
           GGE+RTE+E+RL+G   + +   DW W+ FLPEG NRDH A N  GP    +  L +P +
Sbjct: 532 GGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGRSIEGLKFPKS 711

Query: 275 LVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFI 334
           LV V GLD L DWQ  Y + L+  G++ +L+       GFY  PN      L+ +I +F+
Sbjct: 712 LVCVAGLDLLQDWQLAYAKGLEDCGQQVKLLFLKEATIGFYFLPNNDHFYCLMKEINNFV 891

Query: 335 NN 336
           N+
Sbjct: 892 NS 897


>BI893279 
          Length = 434

 Score =  179 bits (454), Expect = 2e-45
 Identities = 83/146 (56%), Positives = 108/146 (73%)
 Frame = +1

Query: 135 VNYRRTPEYRYPTQYEDGETALKFLDENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRA 194
           VNYR  PE+RYP+Q +DG   +K+LDEN +VL    D++ CFL GDS+G N+AHHVAVR 
Sbjct: 1   VNYRLAPEHRYPSQNDDGFDVIKYLDENGAVLG---DINNCFLVGDSSGGNIAHHVAVRV 171

Query: 195 CKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHN 254
           CK   + + V GL+S++PFFGGEERTE+EIR+    ++S+ +TDW WK FLP G  RDH 
Sbjct: 172 CKEKFRFLIVIGLVSIEPFFGGEERTESEIRMTQDPLVSLEKTDWYWKSFLPSGLGRDHE 351

Query: 255 AANVSGPNAEDLSRLDYPDTLVFVGG 280
           A NVSGPNA ++S L YP+TLV + G
Sbjct: 352 AVNVSGPNAVNISGLGYPNTLVVIAG 429


>TC220774 similar to UP|CAZ_DROME (Q27294) RNA-binding protein cabeza
           (Sarcoma-associated RNA-binding fly homolog) (P19),
           partial (5%)
          Length = 454

 Score =  154 bits (389), Expect = 6e-38
 Identities = 74/150 (49%), Positives = 97/150 (64%)
 Frame = +1

Query: 3   APKKPKLPFPLKTRLSISLIMTLTDAACRSNGSVNRRLLNFLDNKTSAKATPINGVSTKD 62
           A +  KL  P K RL ISL+ TL D + RSN ++NRRL N  D ++    TP++GVS+ D
Sbjct: 34  ASELTKLILPWKVRLLISLLSTLADTSRRSNATINRRLFNLADRQSLPNPTPVDGVSSSD 213

Query: 63  ITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICR 122
           +TVD    +WFRLF P          S++  T+LPV ++FHGG F F S AS  YD +CR
Sbjct: 214 VTVDPARNLWFRLFVP----------SSSSATTLPVFVYFHGGAFAFFSAASTPYDAVCR 363

Query: 123 RFSRELNVVVVSVNYRRTPEYRYPTQYEDG 152
            + R LN VV+SVNYR  PE+RYP+QY+DG
Sbjct: 364 LYCRSLNAVVISVNYRLAPEHRYPSQYDDG 453


>TC206339 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-like protein,
           partial (43%)
          Length = 1255

 Score =  152 bits (383), Expect = 3e-37
 Identities = 105/315 (33%), Positives = 160/315 (50%), Gaps = 12/315 (3%)
 Frame = +2

Query: 33  NGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTE 92
           NG++NR  L  + + T+  + P   V TKDIT++ ++  W RLF P           +  
Sbjct: 107 NGTLNR--LRHIPS-TAPSSDPTLPVLTKDITINQQNNTWLRLFLPRI-------ALSPN 256

Query: 93  TTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDG 152
              LP+++FFHG GF   S AS  +   C   S  +  VV SV YR  PE+R P  Y+D 
Sbjct: 257 PKKLPLIVFFHGSGFIVTSAASTMFHDFCAAMSAAVPAVVASVEYRLAPEHRLPAAYDDA 436

Query: 153 ETALKFL---DENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRA--CKAGLQRIRVAGL 207
             AL+F+    E +  L ++ D+S C+L G SAGA +A+   +RA    + L  +++ GL
Sbjct: 437 AEALEFIRDSSEEEEWLTKHADMSNCYLMGSSAGATIAYFAGLRATDTASDLSPLKIRGL 616

Query: 208 ISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAE--- 264
           I  Q FFGG +R+++E+RLE   ++ +  TD +W++ LP G +RDH   N   P AE   
Sbjct: 617 ILRQVFFGGTQRSKSEVRLENDEVLPLCVTDLLWELALPVGVDRDHEYCN---PRAEKWV 787

Query: 265 ----DLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFYAFPNV 320
                +  L +   LV   G D + D +K     L+  G            HG   F + 
Sbjct: 788 GKMGKMRELGW-RVLVSGNGGDPVIDREKDLVLLLEEKGVVVVSDFDEEGCHG-VEFGDE 961

Query: 321 PEASQLILQIKDFIN 335
            +A+QLI  +K F++
Sbjct: 962 SKANQLIQVVKRFVS 1006


>TC217483 
          Length = 1106

 Score =  146 bits (369), Expect = 1e-35
 Identities = 74/160 (46%), Positives = 99/160 (61%)
 Frame = +2

Query: 176 FLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMA 235
           +LAGDS+G N+AHHVAVRA +   + I V G I + P FGGE+RTE+E +L+G   + + 
Sbjct: 26  YLAGDSSGGNIAHHVAVRAAE---EDIEVLGNILLHPLFGGEKRTESETKLDGKYFVRLQ 196

Query: 236 RTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWL 295
             DW W+ FLPEG++RDH A N  GP  ++L  L  P +LV V GLD L DWQ  Y E L
Sbjct: 197 DRDWYWRAFLPEGTDRDHPACNPFGPKGKNLQGLKLPKSLVCVAGLDLLQDWQLEYVEGL 376

Query: 296 KISGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFIN 335
           K  G+  +L+       GFY  PN      L+ +IK+F+N
Sbjct: 377 KNCGQDVKLLYLKEATIGFYFLPNNDHFYTLMEEIKNFVN 496


>BQ627853 
          Length = 429

 Score =  144 bits (362), Expect = 8e-35
 Identities = 59/103 (57%), Positives = 79/103 (76%)
 Frame = +2

Query: 238 DWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKI 297
           DW WKVFLP GS+RDH A NVSGPNA D+S LDYP+T+VF+GG D L DWQ++YYEWL+ 
Sbjct: 2   DWHWKVFLPNGSDRDHEAVNVSGPNAVDISGLDYPNTIVFMGGFDPLRDWQRKYYEWLRE 181

Query: 298 SGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFINNRVSN 340
           SGK+ +L++YPN  H FY F  +PE S  +  +K+F+  +++N
Sbjct: 182 SGKEVELVDYPNTFHAFYFFSELPETSLFVYDVKEFMAKQMAN 310


>TC220069 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (88%)
          Length = 1071

 Score =  142 bits (359), Expect = 2e-34
 Identities = 106/321 (33%), Positives = 154/321 (47%), Gaps = 19/321 (5%)
 Frame = +1

Query: 33  NGSVNRRLLNFLDNKTSAKATP-----INGVSTKDITVDAESKIWFRLFTPTGINASAGG 87
           +GSV+R      + K   +  P     I+GV+T+DI      ++  RL+ P  I      
Sbjct: 16  DGSVDRTWTGSPEVKFLVEPVPPHEEFIDGVATRDIMAGDNFRV--RLYLPENI------ 171

Query: 88  GSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPT 147
            SN E   LP+ + FHGGGF    P    Y     RF+R   V+VVS   RR PE R P 
Sbjct: 172 -SNEE--KLPIFLHFHGGGFCISEPDWFMYYQFYTRFARVARVIVVSPFLRRAPENRLPA 342

Query: 148 QYEDGETALKFLDE------NKSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQR 201
             +DG  AL +LD        +  L ++ +  + FL GDS+G N+ H VAVRA +A L  
Sbjct: 343 AIDDGFFALLWLDSVARRNAEEPWLKKHGNFGRVFLIGDSSGGNIVHEVAVRAGEAKLDL 522

Query: 202 IRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGP 261
           + +AG I + P F   +R+ +E+    S  +++   D    + LP GSN+DH  A   G 
Sbjct: 523 LHLAGGIPIHPGFMRSKRSRSELEKPQSPFLTLDMVDKFMSLALPLGSNKDHPIACPMGG 702

Query: 262 NAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFY------ 315
            A  LS L  P  L+ +  +D ++D +  Y E +K + K  +L       H FY      
Sbjct: 703 GAPPLSGLKLPPILLCLAEMDLIFDTEMEYNEAMKKANKDVELFVNKGATHSFYLNKIAV 882

Query: 316 -AFPNV-PEASQLILQIKDFI 334
              PN   +   LI +IK+FI
Sbjct: 883 DMDPNTGAQTEALIARIKEFI 945


>TC209193 weakly similar to UP|O64640 (O64640) Expressed protein
           (At2g45600/F17K2.13), partial (34%)
          Length = 1145

 Score =  136 bits (343), Expect = 1e-32
 Identities = 93/289 (32%), Positives = 140/289 (48%), Gaps = 14/289 (4%)
 Frame = +2

Query: 60  TKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDT 119
           +KDI ++  +    RLF P     SA          LP++I+FHGGGF    P+SL +  
Sbjct: 41  SKDIPLNPTTNTSLRLFLPNPPPPSAA--------KLPLIIYFHGGGFILYHPSSLIFHR 196

Query: 120 ICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDENKSV-------LPENVDV 172
            C   +  L  ++ SV+YR  PE+R P  Y D   AL +              L + VD 
Sbjct: 197 SCAALAPSLPAIIASVDYRLCPEHRLPAAYHDALEALHWAQAQAQAQAQSDPWLRDYVDF 376

Query: 173 SKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMI 232
           SK FL G SAG N+A   A+ +    L  +++ G+I   P+F G  R+++E+RL    ++
Sbjct: 377 SKTFLMGSSAGGNIAFFTALNSLSLSLSPLKILGVIMNIPYFSGVHRSDSELRLVDDRIL 556

Query: 233 SMARTDWMWKVFLPEGSNRDH---NAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQK 289
            +   D MW + LPEG++RDH   N   V   + + + RL  P   +   G D L D QK
Sbjct: 557 PLPANDLMWSLSLPEGADRDHVYCNPTAVDNEHGDAIGRL--PPCFINGYGGDPLVDKQK 730

Query: 290 RYYEWLKISGKK--AQLIEYPNMMHGFYAFPNVPEASQLIL--QIKDFI 334
              + L+  G +  A+++E      GF+A     +A    L   IK+FI
Sbjct: 731 ELVKILEARGVRVDARIVE-----DGFHAVELFDQAKAFALGQNIKNFI 862


>TC204890 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (96%)
          Length = 1419

 Score =  135 bits (341), Expect = 2e-32
 Identities = 102/324 (31%), Positives = 150/324 (45%), Gaps = 22/324 (6%)
 Frame = +2

Query: 33  NGSVNRRLLNFLDNKTSAKATP-----INGVSTKDITVD---AESKIWFRLFTPTGINAS 84
           +GSV+R        K  A+  P     I+GV+ +D+ V     +S    RL+ P      
Sbjct: 104 DGSVDRTWSGPDQFKFMAEPAPPHEQFIDGVAIRDVAVTHGGGQSGHHVRLYLPEI---- 271

Query: 85  AGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYR 144
                  ++  LP+V+ FHGGGF    P    Y  +  RF+R    +VVS   RR PE+R
Sbjct: 272 ----KPEDSQKLPIVLHFHGGGFCISEPDWFMYYQVYTRFARSTRSIVVSPFLRRAPEHR 439

Query: 145 YPTQYEDGETALKFLD------ENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAG 198
            P   +DG   L +L         +  L ++ D ++ FL GDS+G N  H VA RA  A 
Sbjct: 440 LPAAIDDGFDTLLWLQTVARSGSLEPWLEQHGDFNRVFLIGDSSGGNSVHEVAARAGSAD 619

Query: 199 LQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANV 258
           L  +RVAG I + P F    R+ +E+ +  +  +++   D    + LP G+ +DH     
Sbjct: 620 LSPVRVAGAIPVHPGFVRSNRSRSEMEMPQTPFLTLDMLDKFLALALPVGATKDHPFTCP 799

Query: 259 SGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFY--- 315
            G  A  L  L  P  L+ V  +D + D +  YYE +K + K  +L     M H FY   
Sbjct: 800 MGEAAPPLEGLKLPPVLLCVAEMDLVRDTEMEYYEAMKKANKDVELYVSKGMTHSFYLNK 979

Query: 316 ----AFPNV-PEASQLILQIKDFI 334
                 PNV  +   LI +IK+FI
Sbjct: 980 IAVDMDPNVSAQTDALISRIKEFI 1051


>TC225190 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_200, partial
           (50%)
          Length = 1298

 Score =  129 bits (323), Expect = 3e-30
 Identities = 95/290 (32%), Positives = 140/290 (47%), Gaps = 9/290 (3%)
 Frame = +1

Query: 54  PINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPA 113
           P   V +KDI +  E+ I+ RLF P     S           LP++++ HGG F   +P 
Sbjct: 334 PETNVESKDIVISEENGIYARLFVPKRTTFSP-----PPQQKLPLLVYTHGGAFCIETPF 498

Query: 114 SLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDEN------KSVLP 167
           S +Y  +  +   + NVV VSV+YRR PE+  PT +ED   ALK++  +         L 
Sbjct: 499 SPNYHNLLNKVVSKANVVAVSVHYRRAPEHPVPTGHEDSWIALKWVASHVGGNGVDEWLN 678

Query: 168 ENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFFGGEERTEAEIRLE 227
           E+VD  K FLAGDSAGAN+A ++ +R    GL  +++ G++ + PFF GEE        E
Sbjct: 679 EHVDFEKVFLAGDSAGANIASYLGIRVGTEGLLGVKLEGVVLVHPFFWGEE----PFGCE 846

Query: 228 GSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDW 287
            +      +   +W+   P  S  D    N S      L +L     L+ V   D + D 
Sbjct: 847 ANRPEQAKKIHDLWRFACPSESGSDDPIINPS--KDPKLGKLACERLLLCVAEKDLVRDR 1020

Query: 288 QKRYYEWLKISGKK--AQLIEYPNMMHGFYAF-PNVPEASQLILQIKDFI 334
              Y E L+ +G    A+++E  +  H F+ F PN   A  LI QI  F+
Sbjct: 1021GLYYKELLEKNGWSGVAEVVETKDEDHVFHLFKPNCENAQVLIDQIVSFL 1170


>TC232928 
          Length = 1076

 Score =  105 bits (263), Expect(2) = 1e-29
 Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 18/230 (7%)
 Frame = +1

Query: 123 RFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDENKSVLPENVD--VSKC----- 175
           R S ++  V++SVNYR  PE  +P  Y+DG  A+ +L +  +      +   SKC     
Sbjct: 265 RLSTKVGCVIMSVNYRLAPENPFPAPYDDGLKAIMWLHQQHNNKGSGTEWWTSKCNFSSV 444

Query: 176 FLAGDSAGANLAHHVAVRACKAG-----LQRIRVAGLISMQPFFGGEERTEAEIRLEGS- 229
           FL GDSAGAN+A++VA R C        L+ + + GLI +QPFFGGE RT++E  +  S 
Sbjct: 445 FLGGDSAGANIAYNVATRLCACDGAALTLRPMNLKGLILIQPFFGGEVRTDSEKGMAQSP 624

Query: 230 -LMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQ 288
              +++A +D  W++ LP G+ RDH   N        L  L    TLV +  +D L D  
Sbjct: 625 GSALNLAASDSYWRLALPCGAKRDHPWCN----PLVKLEELKLMRTLVCISEMDILKDRN 792

Query: 289 KRYYEWLKISGKKAQLIEYPNMMHGFYAFPNVPEA----SQLILQIKDFI 334
             + + L  +GK+ +   +  + H F        A     +++ ++K F+
Sbjct: 793 LEFCDALVRAGKRVEYGVFRGVGHAFQILSKSQVAKSRTKEMMARVKSFM 942



 Score = 42.0 bits (97), Expect(2) = 1e-29
 Identities = 20/70 (28%), Positives = 37/70 (52%)
 Frame = +3

Query: 48  TSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGF 107
           T++  +P   V+++D+ +D+ + IW R + P            ++   +P+++FFHGGGF
Sbjct: 72  TASTMSPELNVTSRDMVIDSVTNIWARFYVPI-----------SQHKKMPLLVFFHGGGF 218

Query: 108 TFMSPASLSY 117
              S A   Y
Sbjct: 219 CVGSAAWSCY 248


>TC205695 
          Length = 1332

 Score =  107 bits (268), Expect = 6e-24
 Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
 Frame = +2

Query: 44  LDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFH 103
           L N      T  +  S+KD+ +  +  I  RLF P  I       S  E   +P++++FH
Sbjct: 221 LQNSPIVPPTLQDPTSSKDVVISGDPLISARLFLPNRIR------SQQEGHKVPILVYFH 382

Query: 104 GGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDEN- 162
           GGGF F S  +  +     +F    +V+VVSV YR  PE   P  Y+D   ALK++  N 
Sbjct: 383 GGGFFFESAFNQLHHNYFNKFVSVADVLVVSVEYRLAPETLLPAAYDDCWDALKWVATNT 562

Query: 163 KSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQ-RIRVAGLISMQPFFGGEERTE 221
           +  L ++ D ++ F+ GDSAGAN+ H++A+RA    L   +++ G      +F G +   
Sbjct: 563 EPWLVKHGDFNRVFIGGDSAGANIVHNIAMRAGAEALPGGVKLLGAFLSHSYFYGSKPIG 742

Query: 222 AEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGL 281
           +E        +     D+   V+       D+   N     A  L+ L     LV V   
Sbjct: 743 SEPVAGHQQSVPYLVWDF---VYPSAPGGIDNPMINPMVTGAPSLAGLGCSKILVCVAEK 913

Query: 282 DGLYDWQKRYYEWLKISG--KKAQLIEYPNMMHGFYAF-PNVPEASQLILQIKDFI 334
           D + D    YYE +K SG   +A+L E     H F+   P    A ++I ++ DF+
Sbjct: 914 DLIKDRGVAYYEAVKKSGWQGEAELFEVEGEDHAFHIHNPQTQNAMKMIKRLSDFL 1081


>BI470238 
          Length = 421

 Score =  105 bits (263), Expect = 2e-23
 Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
 Frame = +2

Query: 31  RSNGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSN 90
           R +G+ NR L  FLD K  A A P+ GV + D  VD  + +++R++ P   N +  G  +
Sbjct: 47  RDDGTFNRELAEFLDRKVPANAIPVEGVFSIDY-VDRNAGLFYRVYLPASGNEAQWGIKD 223

Query: 91  TE-----TTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRY 145
            E     T  +PV+IFFHGG F+  S  S  YDT CRR  R     VVSVNYRR+PE+RY
Sbjct: 224 LEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVRICRAAVVSVNYRRSPEHRY 403

Query: 146 PTQYED 151
           P  Y+D
Sbjct: 404 PCAYDD 421


>TC229726 similar to GB|AAP37709.1|30725374|BT008350 At5g06570 {Arabidopsis
           thaliana;} , partial (36%)
          Length = 674

 Score =  105 bits (262), Expect = 3e-23
 Identities = 68/202 (33%), Positives = 97/202 (47%), Gaps = 10/202 (4%)
 Frame = +1

Query: 32  SNGSVNRRLLNFLDNKTSAKATPI--NGVSTKDITVDAESKIWFRLFTPTGINASAGGGS 89
           S+GS+      F  N    K +PI  N ++ KD   D    +  R + P   + +     
Sbjct: 79  SDGSI------FRSNGIEFKVSPIQDNSITYKDYLFDKRFNLSLRFYKPQQQHIALSN-- 234

Query: 90  NTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQY 149
                 +P+VIF HGGGF F S         C R +  L   VVS +YR  PE+R P   
Sbjct: 235 ----KKVPIVIFLHGGGFCFGSRTWPHIHNCCMRLASGLQAAVVSPDYRLAPEHRLPAAV 402

Query: 150 EDGETALKFLDENKSVLPEN------VDVSKCFLAGDSAGANLAHHVAVRACKAG--LQR 201
           +D   A+++L      L E+      VD  + F+ GDS+G N+AHH+AVR       +  
Sbjct: 403 DDAVEAVRWLQRQGLSLREDAWLSGGVDFDRVFVVGDSSGGNIAHHLAVRLGSGSREMDP 582

Query: 202 IRVAGLISMQPFFGGEERTEAE 223
           +RV G +   PFFGGE RT++E
Sbjct: 583 VRVRGYVLFAPFFGGEVRTKSE 648


>TC204048 
          Length = 1275

 Score =  104 bits (259), Expect = 7e-23
 Identities = 91/342 (26%), Positives = 155/342 (44%), Gaps = 17/342 (4%)
 Frame = +2

Query: 10  PFPLKTRLSISLIMTLTDAA-CRSNGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAE 68
           P  +++R++  ++  L        +GSV R L +  +N  ++   P  GVS+KDI +   
Sbjct: 59  PQKIRSRMAKEIVKELLPLIRVYKDGSVERLLSS--ENVAASPEDPQTGVSSKDIVIADN 232

Query: 69  SKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSREL 128
             +  R+F P          S+     LP+ ++FHGG F   S  S          + E 
Sbjct: 233 PYVSARIFLPK---------SHHTNNKLPIFLYFHGGAFCVESAFSFFVHRYLNILASEA 385

Query: 129 NVVVVSVNYRRTPEYRYPTQYEDGETALKFL----DENKSVLPE-----NVDVSKCFLAG 179
           N++ +SV++R  P +  P  YEDG T LK++    +   +  PE     + D +K ++ G
Sbjct: 386 NIIAISVDFRLLPHHPIPAAYEDGWTTLKWIASHANNTNTTNPEPWLLNHADFTKVYVGG 565

Query: 180 DSAGANLAHHVAVRACKAGLQ-RIRVAGLISMQPFFGGEE--RTEAEIRLEGSLMISMAR 236
           +++GAN+AH++ +RA    L   +++ G +   PFF G +   +EA    E SL +    
Sbjct: 566 ETSGANIAHNLLLRAGNESLPGDLKILGGLLCCPFFWGSKPIGSEAVEGHEQSLAMK--- 736

Query: 237 TDWMWKVFLPEG-SNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWL 295
              +W    P+     D+   N   P A  L+ L     LV + G D   D    Y+  +
Sbjct: 737 ---VWNFACPDAPGGIDNPWINPCVPGAPSLATLACSKLLVTITGKDEFRDRDILYHHTV 907

Query: 296 KISG--KKAQLIEYPNMMHGFYAF-PNVPEASQLILQIKDFI 334
           + SG   + QL +  +  H F  F P    A  +I ++  F+
Sbjct: 908 EQSGWQGELQLFDAGDEEHAFQLFKPETHLAKAMIKRLASFL 1033


>BQ296335 
          Length = 422

 Score =  101 bits (252), Expect = 4e-22
 Identities = 57/131 (43%), Positives = 76/131 (57%), Gaps = 3/131 (2%)
 Frame = +1

Query: 31  RSNGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLF--TPTGINASAGGG 88
           R++G+ NR L  FLD K  A A P++GV + D  V+  + ++ R++   P  +       
Sbjct: 22  RADGTFNRELAEFLDRKVPANAIPVDGVFSFD-HVERSTGLFNRVYQLAPENMGRFIYLE 198

Query: 89  SNTETTSL-PVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPT 147
               TT + PV+IFFHGG F+  S  S  YDT CRR       VVVSVNYRR+PEYRYP 
Sbjct: 199 KPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNNCKAVVVSVNYRRSPEYRYPC 378

Query: 148 QYEDGETALKF 158
            Y+DG  AL +
Sbjct: 379 AYDDGWAALNW 411


>TC222845 
          Length = 643

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
 Frame = +3

Query: 57  GVSTKDITVDAE--SKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPAS 114
           G+S+KDIT+       I  R++ P          +N++T  LP+ ++FHGGGF F S  S
Sbjct: 75  GLSSKDITISHHPPKPISARIYLPNI--------TNSQTKKLPIYVYFHGGGFFFESAFS 230

Query: 115 LSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFL----------DENKS 164
             ++    +   + N++VVSV YR  PE+  P  Y+D   ALK++          +  +S
Sbjct: 231 KLFNDHFLKLVPQANIIVVSVEYRLAPEHPLPAAYDDCWDALKWVASHSTKDTTPNNTES 410

Query: 165 VLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQ----RIRVAGLISMQPFFGGEE 218
            L E+ D ++ F+ GDSAGAN+ H++   + + G +     +++ G I   P+F G E
Sbjct: 411 WLTEHGDFNRVFIGGDSAGANIVHNIL--SFRVGPEPLPGDVQILGSILAHPYFYGSE 578


>BI971072 
          Length = 778

 Score = 88.2 bits (217), Expect = 5e-18
 Identities = 66/213 (30%), Positives = 96/213 (44%), Gaps = 10/213 (4%)
 Frame = -2

Query: 136 NYRRTPEYRYPTQYEDGETALKFL------DENKSVLPENVDVSKCFLAGDSAGANLAHH 189
           +YR  PE R     EDG  ALK+L      DE    L      S  +++GDSAG N+AHH
Sbjct: 753 DYRLAPENRLXDAIEDGXEALKWLQTQAVSDEPDPWLSHVAXXSHVYISGDSAGGNIAHH 574

Query: 190 VAVRA--CKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPE 247
           +A R       L  +RV G + + PFFGG  RT++E        +++   D         
Sbjct: 573 LAARLGFGSPKLDPVRVRGYVLLAPFFGGTIRTKSEAEGPKDAFLNLELID--------- 421

Query: 248 GSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKK-AQLIE 306
                          ++ L  +D+   LV  GG D L D  + Y + LK  G K  + +E
Sbjct: 420 ---------------SQSLEAIDFDPILVVAGGSDLLKDRAEDYAKRLKEWGNKDIEYVE 286

Query: 307 YPNMMHGFYAF-PNVPEASQLILQIKDFINNRV 338
           +    HGF+   PN   +++L+L IK FI   +
Sbjct: 285 FEGQQHGFFTIDPNSEPSNKLMLIIKQFIEKHL 187


>TC225202 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_200, partial
           (35%)
          Length = 1119

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 51/160 (31%), Positives = 81/160 (49%), Gaps = 6/160 (3%)
 Frame = +3

Query: 54  PINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPA 113
           P   V +KDI +  +  +  RL+ P    A            LP++++FHGG F   +P 
Sbjct: 291 PETNVESKDIVISEKDGLSARLYIPKTTYAPQ--------QKLPLLVYFHGGAFIIETPF 446

Query: 114 SLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDEN------KSVLP 167
           S +Y  +      + NV+ VSV+YRR PE+  P  +ED  +ALK++  +      +  L 
Sbjct: 447 SPNYHNLLNNIVSKANVIGVSVHYRRAPEHPVPVAHEDSWSALKWVASHVGENGVEEWLK 626

Query: 168 ENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGL 207
            +    K F AGDSAGAN+A +  +R    GL  +++ G+
Sbjct: 627 NHAHFEKVFFAGDSAGANIASYSGIRVGLEGLPGLKLEGV 746


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,970,286
Number of Sequences: 63676
Number of extensions: 172197
Number of successful extensions: 933
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of query: 342
length of database: 12,639,632
effective HSP length: 98
effective length of query: 244
effective length of database: 6,399,384
effective search space: 1561449696
effective search space used: 1561449696
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)


Medicago: description of AC139853.10