
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139853.10 + phase: 0
(342 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC221324 262 2e-70
TC218289 234 6e-62
BI893279 179 2e-45
TC220774 similar to UP|CAZ_DROME (Q27294) RNA-binding protein ca... 154 6e-38
TC206339 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-li... 152 3e-37
TC217483 146 1e-35
BQ627853 144 8e-35
TC220069 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial ... 142 2e-34
TC209193 weakly similar to UP|O64640 (O64640) Expressed protein ... 136 1e-32
TC204890 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial ... 135 2e-32
TC225190 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_20... 129 3e-30
TC232928 105 1e-29
TC205695 107 6e-24
BI470238 105 2e-23
TC229726 similar to GB|AAP37709.1|30725374|BT008350 At5g06570 {A... 105 3e-23
TC204048 104 7e-23
BQ296335 101 4e-22
TC222845 90 2e-18
BI971072 88 5e-18
TC225202 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_20... 88 6e-18
>TC221324
Length = 620
Score = 262 bits (669), Expect = 2e-70
Identities = 122/178 (68%), Positives = 149/178 (83%), Gaps = 1/178 (0%)
Frame = +3
Query: 164 SVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAG-LQRIRVAGLISMQPFFGGEERTEA 222
+VLPEN DVSKC AGDSAGANLAH+VAVR K+G L+ +RV GL+S+QP+FGGE RT A
Sbjct: 3 AVLPENADVSKCXXAGDSAGANLAHNVAVRVAKSGPLREVRVVGLVSIQPWFGGEARTAA 182
Query: 223 EIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLD 282
E++ EG+ ++S ARTDW+WK FLP+GS+RDH A+NVSGPN+EDLS L+YPDTLVFVGG D
Sbjct: 183 EVKFEGAPLVSTARTDWLWKAFLPDGSDRDHGASNVSGPNSEDLSGLNYPDTLVFVGGFD 362
Query: 283 GLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFINNRVSN 340
L DWQK+Y EWLK SGKKAQLIEY M+H FY FP +PE+SQLI ++KDFI R+S+
Sbjct: 363 PLQDWQKKYCEWLKKSGKKAQLIEYSTMIHAFYIFPELPESSQLISEVKDFITKRISD 536
>TC218289
Length = 1586
Score = 234 bits (596), Expect = 6e-62
Identities = 125/302 (41%), Positives = 174/302 (57%), Gaps = 5/302 (1%)
Frame = +1
Query: 40 LLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTE-----TT 94
L +LD K A A P+ GV + D VD + +++R++ PT N + G + E T
Sbjct: 4 LAEYLDRKVPANAIPVEGVFSID-HVDRNAGLFYRVYLPTSGNEAQWGIRDLEKPLSTTE 180
Query: 95 SLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGET 154
+PV++FFHGG F+ S S YDT CRR R VVSVNYRR+PE+RYP Y+DG
Sbjct: 181 IVPVIVFFHGGSFSHSSANSHIYDTFCRRLVRICKAAVVSVNYRRSPEHRYPCAYDDGWA 360
Query: 155 ALKFLDENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFF 214
AL+++ + +LAGDS+G N+ HHVAVRA + + I V G I + P F
Sbjct: 361 ALRWVKSRAWLQSGREAKVHVYLAGDSSGGNIVHHVAVRAAE---EEIEVLGNILLHPLF 531
Query: 215 GGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDT 274
GGE+RTE+E+RL+G + + DW W+ FLPEG NRDH A N GP + L +P +
Sbjct: 532 GGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGRSIEGLKFPKS 711
Query: 275 LVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFI 334
LV V GLD L DWQ Y + L+ G++ +L+ GFY PN L+ +I +F+
Sbjct: 712 LVCVAGLDLLQDWQLAYAKGLEDCGQQVKLLFLKEATIGFYFLPNNDHFYCLMKEINNFV 891
Query: 335 NN 336
N+
Sbjct: 892 NS 897
>BI893279
Length = 434
Score = 179 bits (454), Expect = 2e-45
Identities = 83/146 (56%), Positives = 108/146 (73%)
Frame = +1
Query: 135 VNYRRTPEYRYPTQYEDGETALKFLDENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRA 194
VNYR PE+RYP+Q +DG +K+LDEN +VL D++ CFL GDS+G N+AHHVAVR
Sbjct: 1 VNYRLAPEHRYPSQNDDGFDVIKYLDENGAVLG---DINNCFLVGDSSGGNIAHHVAVRV 171
Query: 195 CKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHN 254
CK + + V GL+S++PFFGGEERTE+EIR+ ++S+ +TDW WK FLP G RDH
Sbjct: 172 CKEKFRFLIVIGLVSIEPFFGGEERTESEIRMTQDPLVSLEKTDWYWKSFLPSGLGRDHE 351
Query: 255 AANVSGPNAEDLSRLDYPDTLVFVGG 280
A NVSGPNA ++S L YP+TLV + G
Sbjct: 352 AVNVSGPNAVNISGLGYPNTLVVIAG 429
>TC220774 similar to UP|CAZ_DROME (Q27294) RNA-binding protein cabeza
(Sarcoma-associated RNA-binding fly homolog) (P19),
partial (5%)
Length = 454
Score = 154 bits (389), Expect = 6e-38
Identities = 74/150 (49%), Positives = 97/150 (64%)
Frame = +1
Query: 3 APKKPKLPFPLKTRLSISLIMTLTDAACRSNGSVNRRLLNFLDNKTSAKATPINGVSTKD 62
A + KL P K RL ISL+ TL D + RSN ++NRRL N D ++ TP++GVS+ D
Sbjct: 34 ASELTKLILPWKVRLLISLLSTLADTSRRSNATINRRLFNLADRQSLPNPTPVDGVSSSD 213
Query: 63 ITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICR 122
+TVD +WFRLF P S++ T+LPV ++FHGG F F S AS YD +CR
Sbjct: 214 VTVDPARNLWFRLFVP----------SSSSATTLPVFVYFHGGAFAFFSAASTPYDAVCR 363
Query: 123 RFSRELNVVVVSVNYRRTPEYRYPTQYEDG 152
+ R LN VV+SVNYR PE+RYP+QY+DG
Sbjct: 364 LYCRSLNAVVISVNYRLAPEHRYPSQYDDG 453
>TC206339 weakly similar to UP|Q9LVB8 (Q9LVB8) HSR203J protein-like protein,
partial (43%)
Length = 1255
Score = 152 bits (383), Expect = 3e-37
Identities = 105/315 (33%), Positives = 160/315 (50%), Gaps = 12/315 (3%)
Frame = +2
Query: 33 NGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTE 92
NG++NR L + + T+ + P V TKDIT++ ++ W RLF P +
Sbjct: 107 NGTLNR--LRHIPS-TAPSSDPTLPVLTKDITINQQNNTWLRLFLPRI-------ALSPN 256
Query: 93 TTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDG 152
LP+++FFHG GF S AS + C S + VV SV YR PE+R P Y+D
Sbjct: 257 PKKLPLIVFFHGSGFIVTSAASTMFHDFCAAMSAAVPAVVASVEYRLAPEHRLPAAYDDA 436
Query: 153 ETALKFL---DENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRA--CKAGLQRIRVAGL 207
AL+F+ E + L ++ D+S C+L G SAGA +A+ +RA + L +++ GL
Sbjct: 437 AEALEFIRDSSEEEEWLTKHADMSNCYLMGSSAGATIAYFAGLRATDTASDLSPLKIRGL 616
Query: 208 ISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAE--- 264
I Q FFGG +R+++E+RLE ++ + TD +W++ LP G +RDH N P AE
Sbjct: 617 ILRQVFFGGTQRSKSEVRLENDEVLPLCVTDLLWELALPVGVDRDHEYCN---PRAEKWV 787
Query: 265 ----DLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFYAFPNV 320
+ L + LV G D + D +K L+ G HG F +
Sbjct: 788 GKMGKMRELGW-RVLVSGNGGDPVIDREKDLVLLLEEKGVVVVSDFDEEGCHG-VEFGDE 961
Query: 321 PEASQLILQIKDFIN 335
+A+QLI +K F++
Sbjct: 962 SKANQLIQVVKRFVS 1006
>TC217483
Length = 1106
Score = 146 bits (369), Expect = 1e-35
Identities = 74/160 (46%), Positives = 99/160 (61%)
Frame = +2
Query: 176 FLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMA 235
+LAGDS+G N+AHHVAVRA + + I V G I + P FGGE+RTE+E +L+G + +
Sbjct: 26 YLAGDSSGGNIAHHVAVRAAE---EDIEVLGNILLHPLFGGEKRTESETKLDGKYFVRLQ 196
Query: 236 RTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWL 295
DW W+ FLPEG++RDH A N GP ++L L P +LV V GLD L DWQ Y E L
Sbjct: 197 DRDWYWRAFLPEGTDRDHPACNPFGPKGKNLQGLKLPKSLVCVAGLDLLQDWQLEYVEGL 376
Query: 296 KISGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFIN 335
K G+ +L+ GFY PN L+ +IK+F+N
Sbjct: 377 KNCGQDVKLLYLKEATIGFYFLPNNDHFYTLMEEIKNFVN 496
>BQ627853
Length = 429
Score = 144 bits (362), Expect = 8e-35
Identities = 59/103 (57%), Positives = 79/103 (76%)
Frame = +2
Query: 238 DWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKI 297
DW WKVFLP GS+RDH A NVSGPNA D+S LDYP+T+VF+GG D L DWQ++YYEWL+
Sbjct: 2 DWHWKVFLPNGSDRDHEAVNVSGPNAVDISGLDYPNTIVFMGGFDPLRDWQRKYYEWLRE 181
Query: 298 SGKKAQLIEYPNMMHGFYAFPNVPEASQLILQIKDFINNRVSN 340
SGK+ +L++YPN H FY F +PE S + +K+F+ +++N
Sbjct: 182 SGKEVELVDYPNTFHAFYFFSELPETSLFVYDVKEFMAKQMAN 310
>TC220069 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (88%)
Length = 1071
Score = 142 bits (359), Expect = 2e-34
Identities = 106/321 (33%), Positives = 154/321 (47%), Gaps = 19/321 (5%)
Frame = +1
Query: 33 NGSVNRRLLNFLDNKTSAKATP-----INGVSTKDITVDAESKIWFRLFTPTGINASAGG 87
+GSV+R + K + P I+GV+T+DI ++ RL+ P I
Sbjct: 16 DGSVDRTWTGSPEVKFLVEPVPPHEEFIDGVATRDIMAGDNFRV--RLYLPENI------ 171
Query: 88 GSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPT 147
SN E LP+ + FHGGGF P Y RF+R V+VVS RR PE R P
Sbjct: 172 -SNEE--KLPIFLHFHGGGFCISEPDWFMYYQFYTRFARVARVIVVSPFLRRAPENRLPA 342
Query: 148 QYEDGETALKFLDE------NKSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQR 201
+DG AL +LD + L ++ + + FL GDS+G N+ H VAVRA +A L
Sbjct: 343 AIDDGFFALLWLDSVARRNAEEPWLKKHGNFGRVFLIGDSSGGNIVHEVAVRAGEAKLDL 522
Query: 202 IRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGP 261
+ +AG I + P F +R+ +E+ S +++ D + LP GSN+DH A G
Sbjct: 523 LHLAGGIPIHPGFMRSKRSRSELEKPQSPFLTLDMVDKFMSLALPLGSNKDHPIACPMGG 702
Query: 262 NAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFY------ 315
A LS L P L+ + +D ++D + Y E +K + K +L H FY
Sbjct: 703 GAPPLSGLKLPPILLCLAEMDLIFDTEMEYNEAMKKANKDVELFVNKGATHSFYLNKIAV 882
Query: 316 -AFPNV-PEASQLILQIKDFI 334
PN + LI +IK+FI
Sbjct: 883 DMDPNTGAQTEALIARIKEFI 945
>TC209193 weakly similar to UP|O64640 (O64640) Expressed protein
(At2g45600/F17K2.13), partial (34%)
Length = 1145
Score = 136 bits (343), Expect = 1e-32
Identities = 93/289 (32%), Positives = 140/289 (48%), Gaps = 14/289 (4%)
Frame = +2
Query: 60 TKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDT 119
+KDI ++ + RLF P SA LP++I+FHGGGF P+SL +
Sbjct: 41 SKDIPLNPTTNTSLRLFLPNPPPPSAA--------KLPLIIYFHGGGFILYHPSSLIFHR 196
Query: 120 ICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDENKSV-------LPENVDV 172
C + L ++ SV+YR PE+R P Y D AL + L + VD
Sbjct: 197 SCAALAPSLPAIIASVDYRLCPEHRLPAAYHDALEALHWAQAQAQAQAQSDPWLRDYVDF 376
Query: 173 SKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMI 232
SK FL G SAG N+A A+ + L +++ G+I P+F G R+++E+RL ++
Sbjct: 377 SKTFLMGSSAGGNIAFFTALNSLSLSLSPLKILGVIMNIPYFSGVHRSDSELRLVDDRIL 556
Query: 233 SMARTDWMWKVFLPEGSNRDH---NAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQK 289
+ D MW + LPEG++RDH N V + + + RL P + G D L D QK
Sbjct: 557 PLPANDLMWSLSLPEGADRDHVYCNPTAVDNEHGDAIGRL--PPCFINGYGGDPLVDKQK 730
Query: 290 RYYEWLKISGKK--AQLIEYPNMMHGFYAFPNVPEASQLIL--QIKDFI 334
+ L+ G + A+++E GF+A +A L IK+FI
Sbjct: 731 ELVKILEARGVRVDARIVE-----DGFHAVELFDQAKAFALGQNIKNFI 862
>TC204890 similar to UP|Q9SSY8 (Q9SSY8) Hsr203J homolog, partial (96%)
Length = 1419
Score = 135 bits (341), Expect = 2e-32
Identities = 102/324 (31%), Positives = 150/324 (45%), Gaps = 22/324 (6%)
Frame = +2
Query: 33 NGSVNRRLLNFLDNKTSAKATP-----INGVSTKDITVD---AESKIWFRLFTPTGINAS 84
+GSV+R K A+ P I+GV+ +D+ V +S RL+ P
Sbjct: 104 DGSVDRTWSGPDQFKFMAEPAPPHEQFIDGVAIRDVAVTHGGGQSGHHVRLYLPEI---- 271
Query: 85 AGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYR 144
++ LP+V+ FHGGGF P Y + RF+R +VVS RR PE+R
Sbjct: 272 ----KPEDSQKLPIVLHFHGGGFCISEPDWFMYYQVYTRFARSTRSIVVSPFLRRAPEHR 439
Query: 145 YPTQYEDGETALKFLD------ENKSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAG 198
P +DG L +L + L ++ D ++ FL GDS+G N H VA RA A
Sbjct: 440 LPAAIDDGFDTLLWLQTVARSGSLEPWLEQHGDFNRVFLIGDSSGGNSVHEVAARAGSAD 619
Query: 199 LQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANV 258
L +RVAG I + P F R+ +E+ + + +++ D + LP G+ +DH
Sbjct: 620 LSPVRVAGAIPVHPGFVRSNRSRSEMEMPQTPFLTLDMLDKFLALALPVGATKDHPFTCP 799
Query: 259 SGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKKAQLIEYPNMMHGFY--- 315
G A L L P L+ V +D + D + YYE +K + K +L M H FY
Sbjct: 800 MGEAAPPLEGLKLPPVLLCVAEMDLVRDTEMEYYEAMKKANKDVELYVSKGMTHSFYLNK 979
Query: 316 ----AFPNV-PEASQLILQIKDFI 334
PNV + LI +IK+FI
Sbjct: 980 IAVDMDPNVSAQTDALISRIKEFI 1051
>TC225190 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_200, partial
(50%)
Length = 1298
Score = 129 bits (323), Expect = 3e-30
Identities = 95/290 (32%), Positives = 140/290 (47%), Gaps = 9/290 (3%)
Frame = +1
Query: 54 PINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPA 113
P V +KDI + E+ I+ RLF P S LP++++ HGG F +P
Sbjct: 334 PETNVESKDIVISEENGIYARLFVPKRTTFSP-----PPQQKLPLLVYTHGGAFCIETPF 498
Query: 114 SLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDEN------KSVLP 167
S +Y + + + NVV VSV+YRR PE+ PT +ED ALK++ + L
Sbjct: 499 SPNYHNLLNKVVSKANVVAVSVHYRRAPEHPVPTGHEDSWIALKWVASHVGGNGVDEWLN 678
Query: 168 ENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGLISMQPFFGGEERTEAEIRLE 227
E+VD K FLAGDSAGAN+A ++ +R GL +++ G++ + PFF GEE E
Sbjct: 679 EHVDFEKVFLAGDSAGANIASYLGIRVGTEGLLGVKLEGVVLVHPFFWGEE----PFGCE 846
Query: 228 GSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDW 287
+ + +W+ P S D N S L +L L+ V D + D
Sbjct: 847 ANRPEQAKKIHDLWRFACPSESGSDDPIINPS--KDPKLGKLACERLLLCVAEKDLVRDR 1020
Query: 288 QKRYYEWLKISGKK--AQLIEYPNMMHGFYAF-PNVPEASQLILQIKDFI 334
Y E L+ +G A+++E + H F+ F PN A LI QI F+
Sbjct: 1021GLYYKELLEKNGWSGVAEVVETKDEDHVFHLFKPNCENAQVLIDQIVSFL 1170
>TC232928
Length = 1076
Score = 105 bits (263), Expect(2) = 1e-29
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 18/230 (7%)
Frame = +1
Query: 123 RFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDENKSVLPENVD--VSKC----- 175
R S ++ V++SVNYR PE +P Y+DG A+ +L + + + SKC
Sbjct: 265 RLSTKVGCVIMSVNYRLAPENPFPAPYDDGLKAIMWLHQQHNNKGSGTEWWTSKCNFSSV 444
Query: 176 FLAGDSAGANLAHHVAVRACKAG-----LQRIRVAGLISMQPFFGGEERTEAEIRLEGS- 229
FL GDSAGAN+A++VA R C L+ + + GLI +QPFFGGE RT++E + S
Sbjct: 445 FLGGDSAGANIAYNVATRLCACDGAALTLRPMNLKGLILIQPFFGGEVRTDSEKGMAQSP 624
Query: 230 -LMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQ 288
+++A +D W++ LP G+ RDH N L L TLV + +D L D
Sbjct: 625 GSALNLAASDSYWRLALPCGAKRDHPWCN----PLVKLEELKLMRTLVCISEMDILKDRN 792
Query: 289 KRYYEWLKISGKKAQLIEYPNMMHGFYAFPNVPEA----SQLILQIKDFI 334
+ + L +GK+ + + + H F A +++ ++K F+
Sbjct: 793 LEFCDALVRAGKRVEYGVFRGVGHAFQILSKSQVAKSRTKEMMARVKSFM 942
Score = 42.0 bits (97), Expect(2) = 1e-29
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 48 TSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGF 107
T++ +P V+++D+ +D+ + IW R + P ++ +P+++FFHGGGF
Sbjct: 72 TASTMSPELNVTSRDMVIDSVTNIWARFYVPI-----------SQHKKMPLLVFFHGGGF 218
Query: 108 TFMSPASLSY 117
S A Y
Sbjct: 219 CVGSAAWSCY 248
>TC205695
Length = 1332
Score = 107 bits (268), Expect = 6e-24
Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
Frame = +2
Query: 44 LDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFH 103
L N T + S+KD+ + + I RLF P I S E +P++++FH
Sbjct: 221 LQNSPIVPPTLQDPTSSKDVVISGDPLISARLFLPNRIR------SQQEGHKVPILVYFH 382
Query: 104 GGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDEN- 162
GGGF F S + + +F +V+VVSV YR PE P Y+D ALK++ N
Sbjct: 383 GGGFFFESAFNQLHHNYFNKFVSVADVLVVSVEYRLAPETLLPAAYDDCWDALKWVATNT 562
Query: 163 KSVLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQ-RIRVAGLISMQPFFGGEERTE 221
+ L ++ D ++ F+ GDSAGAN+ H++A+RA L +++ G +F G +
Sbjct: 563 EPWLVKHGDFNRVFIGGDSAGANIVHNIAMRAGAEALPGGVKLLGAFLSHSYFYGSKPIG 742
Query: 222 AEIRLEGSLMISMARTDWMWKVFLPEGSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGL 281
+E + D+ V+ D+ N A L+ L LV V
Sbjct: 743 SEPVAGHQQSVPYLVWDF---VYPSAPGGIDNPMINPMVTGAPSLAGLGCSKILVCVAEK 913
Query: 282 DGLYDWQKRYYEWLKISG--KKAQLIEYPNMMHGFYAF-PNVPEASQLILQIKDFI 334
D + D YYE +K SG +A+L E H F+ P A ++I ++ DF+
Sbjct: 914 DLIKDRGVAYYEAVKKSGWQGEAELFEVEGEDHAFHIHNPQTQNAMKMIKRLSDFL 1081
>BI470238
Length = 421
Score = 105 bits (263), Expect = 2e-23
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Frame = +2
Query: 31 RSNGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSN 90
R +G+ NR L FLD K A A P+ GV + D VD + +++R++ P N + G +
Sbjct: 47 RDDGTFNRELAEFLDRKVPANAIPVEGVFSIDY-VDRNAGLFYRVYLPASGNEAQWGIKD 223
Query: 91 TE-----TTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRY 145
E T +PV+IFFHGG F+ S S YDT CRR R VVSVNYRR+PE+RY
Sbjct: 224 LEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVRICRAAVVSVNYRRSPEHRY 403
Query: 146 PTQYED 151
P Y+D
Sbjct: 404 PCAYDD 421
>TC229726 similar to GB|AAP37709.1|30725374|BT008350 At5g06570 {Arabidopsis
thaliana;} , partial (36%)
Length = 674
Score = 105 bits (262), Expect = 3e-23
Identities = 68/202 (33%), Positives = 97/202 (47%), Gaps = 10/202 (4%)
Frame = +1
Query: 32 SNGSVNRRLLNFLDNKTSAKATPI--NGVSTKDITVDAESKIWFRLFTPTGINASAGGGS 89
S+GS+ F N K +PI N ++ KD D + R + P + +
Sbjct: 79 SDGSI------FRSNGIEFKVSPIQDNSITYKDYLFDKRFNLSLRFYKPQQQHIALSN-- 234
Query: 90 NTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQY 149
+P+VIF HGGGF F S C R + L VVS +YR PE+R P
Sbjct: 235 ----KKVPIVIFLHGGGFCFGSRTWPHIHNCCMRLASGLQAAVVSPDYRLAPEHRLPAAV 402
Query: 150 EDGETALKFLDENKSVLPEN------VDVSKCFLAGDSAGANLAHHVAVRACKAG--LQR 201
+D A+++L L E+ VD + F+ GDS+G N+AHH+AVR +
Sbjct: 403 DDAVEAVRWLQRQGLSLREDAWLSGGVDFDRVFVVGDSSGGNIAHHLAVRLGSGSREMDP 582
Query: 202 IRVAGLISMQPFFGGEERTEAE 223
+RV G + PFFGGE RT++E
Sbjct: 583 VRVRGYVLFAPFFGGEVRTKSE 648
>TC204048
Length = 1275
Score = 104 bits (259), Expect = 7e-23
Identities = 91/342 (26%), Positives = 155/342 (44%), Gaps = 17/342 (4%)
Frame = +2
Query: 10 PFPLKTRLSISLIMTLTDAA-CRSNGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAE 68
P +++R++ ++ L +GSV R L + +N ++ P GVS+KDI +
Sbjct: 59 PQKIRSRMAKEIVKELLPLIRVYKDGSVERLLSS--ENVAASPEDPQTGVSSKDIVIADN 232
Query: 69 SKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPASLSYDTICRRFSREL 128
+ R+F P S+ LP+ ++FHGG F S S + E
Sbjct: 233 PYVSARIFLPK---------SHHTNNKLPIFLYFHGGAFCVESAFSFFVHRYLNILASEA 385
Query: 129 NVVVVSVNYRRTPEYRYPTQYEDGETALKFL----DENKSVLPE-----NVDVSKCFLAG 179
N++ +SV++R P + P YEDG T LK++ + + PE + D +K ++ G
Sbjct: 386 NIIAISVDFRLLPHHPIPAAYEDGWTTLKWIASHANNTNTTNPEPWLLNHADFTKVYVGG 565
Query: 180 DSAGANLAHHVAVRACKAGLQ-RIRVAGLISMQPFFGGEE--RTEAEIRLEGSLMISMAR 236
+++GAN+AH++ +RA L +++ G + PFF G + +EA E SL +
Sbjct: 566 ETSGANIAHNLLLRAGNESLPGDLKILGGLLCCPFFWGSKPIGSEAVEGHEQSLAMK--- 736
Query: 237 TDWMWKVFLPEG-SNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWL 295
+W P+ D+ N P A L+ L LV + G D D Y+ +
Sbjct: 737 ---VWNFACPDAPGGIDNPWINPCVPGAPSLATLACSKLLVTITGKDEFRDRDILYHHTV 907
Query: 296 KISG--KKAQLIEYPNMMHGFYAF-PNVPEASQLILQIKDFI 334
+ SG + QL + + H F F P A +I ++ F+
Sbjct: 908 EQSGWQGELQLFDAGDEEHAFQLFKPETHLAKAMIKRLASFL 1033
>BQ296335
Length = 422
Score = 101 bits (252), Expect = 4e-22
Identities = 57/131 (43%), Positives = 76/131 (57%), Gaps = 3/131 (2%)
Frame = +1
Query: 31 RSNGSVNRRLLNFLDNKTSAKATPINGVSTKDITVDAESKIWFRLF--TPTGINASAGGG 88
R++G+ NR L FLD K A A P++GV + D V+ + ++ R++ P +
Sbjct: 22 RADGTFNRELAEFLDRKVPANAIPVDGVFSFD-HVERSTGLFNRVYQLAPENMGRFIYLE 198
Query: 89 SNTETTSL-PVVIFFHGGGFTFMSPASLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPT 147
TT + PV+IFFHGG F+ S S YDT CRR VVVSVNYRR+PEYRYP
Sbjct: 199 KPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNNCKAVVVSVNYRRSPEYRYPC 378
Query: 148 QYEDGETALKF 158
Y+DG AL +
Sbjct: 379 AYDDGWAALNW 411
>TC222845
Length = 643
Score = 89.7 bits (221), Expect = 2e-18
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 16/178 (8%)
Frame = +3
Query: 57 GVSTKDITVDAE--SKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPAS 114
G+S+KDIT+ I R++ P +N++T LP+ ++FHGGGF F S S
Sbjct: 75 GLSSKDITISHHPPKPISARIYLPNI--------TNSQTKKLPIYVYFHGGGFFFESAFS 230
Query: 115 LSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFL----------DENKS 164
++ + + N++VVSV YR PE+ P Y+D ALK++ + +S
Sbjct: 231 KLFNDHFLKLVPQANIIVVSVEYRLAPEHPLPAAYDDCWDALKWVASHSTKDTTPNNTES 410
Query: 165 VLPENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQ----RIRVAGLISMQPFFGGEE 218
L E+ D ++ F+ GDSAGAN+ H++ + + G + +++ G I P+F G E
Sbjct: 411 WLTEHGDFNRVFIGGDSAGANIVHNIL--SFRVGPEPLPGDVQILGSILAHPYFYGSE 578
>BI971072
Length = 778
Score = 88.2 bits (217), Expect = 5e-18
Identities = 66/213 (30%), Positives = 96/213 (44%), Gaps = 10/213 (4%)
Frame = -2
Query: 136 NYRRTPEYRYPTQYEDGETALKFL------DENKSVLPENVDVSKCFLAGDSAGANLAHH 189
+YR PE R EDG ALK+L DE L S +++GDSAG N+AHH
Sbjct: 753 DYRLAPENRLXDAIEDGXEALKWLQTQAVSDEPDPWLSHVAXXSHVYISGDSAGGNIAHH 574
Query: 190 VAVRA--CKAGLQRIRVAGLISMQPFFGGEERTEAEIRLEGSLMISMARTDWMWKVFLPE 247
+A R L +RV G + + PFFGG RT++E +++ D
Sbjct: 573 LAARLGFGSPKLDPVRVRGYVLLAPFFGGTIRTKSEAEGPKDAFLNLELID--------- 421
Query: 248 GSNRDHNAANVSGPNAEDLSRLDYPDTLVFVGGLDGLYDWQKRYYEWLKISGKK-AQLIE 306
++ L +D+ LV GG D L D + Y + LK G K + +E
Sbjct: 420 ---------------SQSLEAIDFDPILVVAGGSDLLKDRAEDYAKRLKEWGNKDIEYVE 286
Query: 307 YPNMMHGFYAF-PNVPEASQLILQIKDFINNRV 338
+ HGF+ PN +++L+L IK FI +
Sbjct: 285 FEGQQHGFFTIDPNSEPSNKLMLIIKQFIEKHL 187
>TC225202 weakly similar to UP|Q8VZG3 (Q8VZG3) AT3g48690/T8P19_200, partial
(35%)
Length = 1119
Score = 87.8 bits (216), Expect = 6e-18
Identities = 51/160 (31%), Positives = 81/160 (49%), Gaps = 6/160 (3%)
Frame = +3
Query: 54 PINGVSTKDITVDAESKIWFRLFTPTGINASAGGGSNTETTSLPVVIFFHGGGFTFMSPA 113
P V +KDI + + + RL+ P A LP++++FHGG F +P
Sbjct: 291 PETNVESKDIVISEKDGLSARLYIPKTTYAPQ--------QKLPLLVYFHGGAFIIETPF 446
Query: 114 SLSYDTICRRFSRELNVVVVSVNYRRTPEYRYPTQYEDGETALKFLDEN------KSVLP 167
S +Y + + NV+ VSV+YRR PE+ P +ED +ALK++ + + L
Sbjct: 447 SPNYHNLLNNIVSKANVIGVSVHYRRAPEHPVPVAHEDSWSALKWVASHVGENGVEEWLK 626
Query: 168 ENVDVSKCFLAGDSAGANLAHHVAVRACKAGLQRIRVAGL 207
+ K F AGDSAGAN+A + +R GL +++ G+
Sbjct: 627 NHAHFEKVFFAGDSAGANIASYSGIRVGLEGLPGLKLEGV 746
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,970,286
Number of Sequences: 63676
Number of extensions: 172197
Number of successful extensions: 933
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of query: 342
length of database: 12,639,632
effective HSP length: 98
effective length of query: 244
effective length of database: 6,399,384
effective search space: 1561449696
effective search space used: 1561449696
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC139853.10