Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139744.2 - phase: 0 /pseudo
         (1366 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CO985160                                                               60  7e-09
TC206320 similar to UP|Q9W4F9 (Q9W4F9) CG32772-PA, partial (10%)       51  4e-06
TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partia...    47  6e-05
BU965513                                                               46  1e-04
TC226370 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pr...    46  1e-04
TC231181 weakly similar to UP|Q86PD9 (Q86PD9) RE65015p, partial ...    45  2e-04
TC206319 similar to UP|Q9Y0C9 (Q9Y0C9) Ras interacting protein R...    45  2e-04
BQ299342 similar to GP|18139887|gb O-linked N-acetyl glucosamine...    45  3e-04
BM308932                                                               44  4e-04
BI316328                                                               44  4e-04
TC226371 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich pr...    44  6e-04
TC231862 similar to GB|AAL60196.1|18139887|AF441079 O-linked N-a...    43  8e-04
TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pr...    39  0.001
BF071504                                                               43  0.001
BE807600 similar to GP|24461867|gb CTV.22 {Poncirus trifoliata},...    43  0.001
TC215490 weakly similar to UP|Q8I7C3 (Q8I7C3) Lasp protein, part...    42  0.001
TC220969 similar to UP|Q94IB3 (Q94IB3) WRKY DNA-binding protein,...    42  0.002
TC225777 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 ...    40  0.007
AW460156 similar to GP|18033922|gb SEUSS transcriptional co-regu...    40  0.007
CO979245                                                               40  0.007

>CO985160 
          Length = 777

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
 Frame = -2

Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQ--QMQQFQHHYRLMQQHQQQL-R 464
           PQ Q QQ  P+ + QQQL  LQ  Q  +  L  QQ+Q  Q+QQ Q     +QQ QQQL +
Sbjct: 701 PQLQQQQQLPH-MQQQQLPQLQQQQQQLPQLQQQQQQLPQLQQQQQQLPQLQQQQQQLPQ 525

Query: 465 MQQQQQQ--QLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPPQAVHIP 510
           +QQQQQQ  QL      VQQ  Q+A+  QQ L Q   +   PQ   +P
Sbjct: 524 LQQQQQQLPQLQQQQQQVQQQ-QLAQLQQQQLPQIQQQQQLPQLQQLP 384



 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 40/103 (38%), Positives = 50/103 (47%), Gaps = 6/103 (5%)
 Frame = -2

Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ 468
           Q Q QQ P     QQQL  LQ  Q  +  L  QQ+Q  Q  Q   +L Q  QQQ ++QQQ
Sbjct: 641 QQQQQQLPQLQQQQQQLPQLQQQQQQLPQLQQQQQQLPQLQQQQQQLPQLQQQQQQVQQQ 462

Query: 469 Q----QQQLHAGVSPVQQPGQVARPP--QQSLQQPSVKSCPPQ 505
           Q    QQQ    +   QQ  Q+ + P  QQ  Q P ++   PQ
Sbjct: 461 QLAQLQQQQLPQIQQQQQLPQLQQLPQLQQQQQLPQLQQLQPQ 333



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = -2

Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ 468
           Q Q QQ      NQQQ       Q  +  +  QQ  Q+QQ Q     +QQ QQQL   QQ
Sbjct: 755 QQQMQQQHQQMQNQQQHLPQLQQQQQLPHMQQQQLPQLQQQQQQLPQLQQQQQQLPQLQQ 576

Query: 469 QQQQLHAGVSPVQQPGQVARPPQQ--SLQQ 496
           QQQQL       QQ  Q+ +  QQ   LQQ
Sbjct: 575 QQQQLPQLQQQQQQLPQLQQQQQQLPQLQQ 486



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 36/92 (39%), Positives = 46/92 (49%), Gaps = 15/92 (16%)
 Frame = -2

Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVES--LNPQQRQQMQQFQHHYRLMQ-------QH 459
           Q Q QQ P     QQQL  LQ  Q  V+   L   Q+QQ+ Q Q   +L Q       Q 
Sbjct: 551 QQQQQQLPQLQQQQQQLPQLQQQQQQVQQQQLAQLQQQQLPQIQQQQQLPQLQQLPQLQQ 372

Query: 460 QQQL----RMQQQQQQQLHAGVSP--VQQPGQ 485
           QQQL    ++Q QQQQ + +G+    VQ PG+
Sbjct: 371 QQQLPQLQQLQPQQQQMVGSGMGQAYVQGPGR 276



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 31/89 (34%), Positives = 40/89 (44%)
 Frame = -2

Query: 417 PYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAG 476
           P   +QQQ Q+ Q +Q         Q+Q + Q Q   +L    QQQL   QQQQQQL   
Sbjct: 776 PQLSSQQQQQMQQQHQQM-----QNQQQHLPQLQQQQQLPHMQQQQLPQLQQQQQQLPQL 612

Query: 477 VSPVQQPGQVARPPQQSLQQPSVKSCPPQ 505
               QQ  Q+ +  QQ  Q    +   PQ
Sbjct: 611 QQQQQQLPQLQQQQQQLPQLQQQQQQLPQ 525



 Score = 39.3 bits (90), Expect = 0.012
 Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
 Frame = -2

Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQR------QQMQQFQHHYR-LMQQHQ 460
           PQ   QQ       QQQ Q +Q  Q H+  L  QQ+      QQ+ Q Q   + L Q  Q
Sbjct: 776 PQLSSQQQQQM---QQQHQQMQNQQQHLPQLQQQQQLPHMQQQQLPQLQQQQQQLPQLQQ 606

Query: 461 QQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVK 500
           QQ ++ Q QQQQ        QQ  Q+ +  QQ  Q P ++
Sbjct: 605 QQQQLPQLQQQQQQL-PQLQQQQQQLPQLQQQQQQLPQLQ 489


>TC206320 similar to UP|Q9W4F9 (Q9W4F9) CG32772-PA, partial (10%)
          Length = 1120

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 43/123 (34%), Positives = 53/123 (42%), Gaps = 7/123 (5%)
 Frame = +2

Query: 383 AKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQ 442
           A++  P G     M+G A     RP    P  PP            Q  Q H +   PQ 
Sbjct: 215 ARQIHPGGTPSLSMLGRANTMQ-RP--IGPMGPPKIMAGMNLYMSQQQQQQHQQ---PQP 376

Query: 443 RQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPP-------QQSLQ 495
           +QQ QQ Q   +L Q  QQQL  QQQQQQ+  + +  V  P QV  P        QQ+ Q
Sbjct: 377 QQQQQQHQQQLQLQQHMQQQL--QQQQQQETTSQLQAVVSPPQVGSPSMGIPPMNQQAQQ 550

Query: 496 QPS 498
           Q S
Sbjct: 551 QAS 559



 Score = 29.6 bits (65), Expect = 9.5
 Identities = 22/63 (34%), Positives = 25/63 (38%)
 Frame = +2

Query: 445 QMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPP 504
           Q QQ QH     QQ QQQ   QQQ Q Q H      QQ  Q      Q++  P     P 
Sbjct: 341 QQQQQQHQQPQPQQQQQQ--HQQQLQLQQHMQQQLQQQQQQETTSQLQAVVSPPQVGSPS 514

Query: 505 QAV 507
             +
Sbjct: 515 MGI 523


>TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partial (4%)
          Length = 540

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
 Frame = +2

Query: 422 QQQLQLLQYYQSHVESLNPQQR------QQMQQFQHHYRLMQQHQQQ----LRMQQQQQQ 471
           QQQ Q +Q  Q H+  L  QQ+      QQ+ Q Q   +L Q  QQQ    L+ QQQ QQ
Sbjct: 14  QQQHQQMQNQQQHLPQLQQQQQLPHMQQQQLPQLQQQQQLPQLQQQQQLPQLQQQQQLQQ 193

Query: 472 QLHAGVSPVQQPGQVARPP--QQSLQQPSVKSCPPQ 505
           Q    +   QQ  Q+ + P  QQ  Q P ++   PQ
Sbjct: 194 QQLPQLQQQQQLPQLQQLPQLQQQQQLPQLQQLQPQ 301



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
 Frame = +2

Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQL---- 463
           PQ Q QQ  P    QQQL  LQ  Q   +   PQ +QQ Q  Q       Q QQQL    
Sbjct: 107 PQLQQQQQLPQLQQQQQLPQLQQQQQLQQQQLPQLQQQQQLPQLQQLPQLQQQQQLPQLQ 286

Query: 464 RMQQQQQQQLHAGVSPV--QQPGQ 485
           ++Q QQQQ + AG+     Q PG+
Sbjct: 287 QLQPQQQQMVGAGMGQAFGQGPGR 358



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 27/67 (40%), Positives = 29/67 (42%)
 Frame = +2

Query: 437 SLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQ 496
           S   QQ QQMQ  Q H   +QQ QQ   MQQQQ  QL       Q   Q   P  Q  QQ
Sbjct: 5   SQQQQQHQQMQNQQQHLPQLQQQQQLPHMQQQQLPQLQQQQQLPQLQQQQQLPQLQQQQQ 184

Query: 497 PSVKSCP 503
              +  P
Sbjct: 185 LQQQQLP 205



 Score = 40.0 bits (92), Expect = 0.007
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
 Frame = +2

Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQH------QQ 461
           PQ Q QQ  P+ + QQQL  LQ  Q   +    QQ+QQ+ Q Q   +L QQ       QQ
Sbjct: 56  PQLQQQQQLPH-MQQQQLPQLQQQQQLPQL---QQQQQLPQLQQQQQLQQQQLPQLQQQQ 223

Query: 462 QL-RMQQ----QQQQQL 473
           QL ++QQ    QQQQQL
Sbjct: 224 QLPQLQQLPQLQQQQQL 274


>BU965513 
          Length = 452

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 37/89 (41%), Positives = 42/89 (46%)
 Frame = +2

Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ 468
           Q+Q  Q P  +L QQQ Q LQ  Q   ++L PQ       FQ H+ L QQ       QQQ
Sbjct: 236 QSQSNQDPNLFLQQQQQQFLQS-QPFQQALPPQS-----PFQQHHHLYQQ-------QQQ 376

Query: 469 QQQQLHAGVSPVQQPGQVARPPQQSLQQP 497
           QQQQ      P QQ  Q     QQ  QQP
Sbjct: 377 QQQQQRLLPQPQQQQQQ-----QQQQQQP 448



 Score = 32.3 bits (72), Expect = 1.5
 Identities = 26/67 (38%), Positives = 30/67 (43%)
 Frame = +2

Query: 405 ARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLR 464
           A PPQ+  QQ    Y  QQQ                QQ+QQ        RL+ Q QQQ +
Sbjct: 317 ALPPQSPFQQHHHLYQQQQQ----------------QQQQQ--------RLLPQPQQQQQ 424

Query: 465 MQQQQQQ 471
            QQQQQQ
Sbjct: 425 QQQQQQQ 445


>TC226370 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
           partial (43%)
          Length = 1810

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 64/262 (24%), Positives = 92/262 (34%), Gaps = 3/262 (1%)
 Frame = +2

Query: 254 ASKDKAAGVGSGTTSSESGPLKPWHISARPQNTDSANSDISQRIAF-LQTQLAKTPMPSI 312
           A K+ ++   S +    S P      +  P+ TD+A+   +Q++A  L  Q+A  P P  
Sbjct: 485 AQKESSSSSHSQSNEERSSP------TTDPKKTDNASDANNQQLALALPHQIAPQPQPPA 646

Query: 313 TSKAELPTIEEAWNTPVVSDWNSKHQPQQKRHPGMAQQGGPKPNHYVNGVNGGAVPPPPY 372
                 P ++     P     N    PQQ             P +Y+        PP P 
Sbjct: 647 ------PQVQAQAQAPAP---NVTQVPQQ-------------PPYYM--------PPTPL 736

Query: 373 PG-AVPGAGPNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYY 431
           P  AVP    N  ++ P+ +              R PQ    QP P  +    +Q   +Y
Sbjct: 737 PNPAVPQHPQN--QYLPSDQ------------QYRTPQHVAPQPTPSQVTPSPVQQFSHY 874

Query: 432 QSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARP-P 490
           Q   +    QQ QQ QQ+       Q    Q    Q Q +     V P  QP Q   P P
Sbjct: 875 QQQQQQPQQQQPQQQQQWS-----QQVLPSQPPPMQSQVRPPSPNVYPPYQPNQATNPSP 1039

Query: 491 QQSLQQPSVKSCPPQAVHIPFS 512
            ++L        P   V  P S
Sbjct: 1040AETLPNSMAMQMPYSGVPPPGS 1105



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 33/98 (33%), Positives = 42/98 (42%)
 Frame = +2

Query: 407 PPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQ 466
           P  A PQ P   YL   Q      + +   + +      +QQF H+ +  QQ QQQ   Q
Sbjct: 737 PNPAVPQHPQNQYLPSDQQYRTPQHVAPQPTPSQVTPSPVQQFSHYQQQQQQPQQQ---Q 907

Query: 467 QQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPP 504
            QQQQQ    V P Q P     P Q  ++ PS    PP
Sbjct: 908 PQQQQQWSQQVLPSQPP-----PMQSQVRPPSPNVYPP 1006


>TC231181 weakly similar to UP|Q86PD9 (Q86PD9) RE65015p, partial (10%)
          Length = 671

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 33/81 (40%), Positives = 40/81 (48%), Gaps = 3/81 (3%)
 Frame = +2

Query: 426 QLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQ 485
           QL QYYQ        QQ+QQ+Q  QH+ +L QQ  QQ   QQQ Q  L   + P Q   Q
Sbjct: 236 QLWQYYQ--------QQQQQLQLQQHYIQLQQQSFQQGLSQQQLQHSLLEPLQPQQLQQQ 391

Query: 486 VARPPQQSL---QQPSVKSCP 503
           V +  QQ     QQP  +  P
Sbjct: 392 VLQQQQQQYFQQQQPLQQEHP 454



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 3/84 (3%)
 Frame = +2

Query: 418 YYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHH-YRLMQQHQQQLRMQQQQQQQLHAG 476
           Y   QQQLQL Q+Y   ++  + QQ    QQ QH     +Q  Q Q ++ QQQQQQ    
Sbjct: 251 YQQQQQQLQLQQHY-IQLQQQSFQQGLSQQQLQHSLLEPLQPQQLQQQVLQQQQQQYFQQ 427

Query: 477 VSPVQQ--PGQVARPPQQSLQQPS 498
             P+QQ  P  + +  Q S Q  S
Sbjct: 428 QQPLQQEHPENLMQQQQPSTQSSS 499



 Score = 35.0 bits (79), Expect = 0.23
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
 Frame = +2

Query: 419 YLNQQQLQLLQ--YYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQ----QQQQ 472
           +L+ + L +L   YY    ++++     +M +    ++  QQ QQQL++QQ     QQQ 
Sbjct: 134 HLSLKHLPILHHMYYNMQCKAMSDMDICRMTKNNQLWQYYQQQQQQLQLQQHYIQLQQQS 313

Query: 473 LHAGVSPVQQPGQVARP--PQQSLQQ 496
              G+S  Q    +  P  PQQ  QQ
Sbjct: 314 FQQGLSQQQLQHSLLEPLQPQQLQQQ 391



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 29/97 (29%), Positives = 37/97 (37%), Gaps = 4/97 (4%)
 Frame = +2

Query: 404 HARPPQAQPQQPPPYYLNQQQLQLLQ----YYQSHVESLNPQQRQQMQQFQHHYRLMQQH 459
           H+     QPQQ     L QQQ Q  Q      Q H E+L  QQ+   Q   H      Q 
Sbjct: 347 HSLLEPLQPQQLQQQVLQQQQQQYFQQQQPLQQEHPENLMQQQQPSTQSSSHPVADQGQA 526

Query: 460 QQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQ 496
              L+       Q    + P+  P  V  P ++S QQ
Sbjct: 527 IVTLQGHGAVLSQQSDKLGPISSP-VVHHPQEKSTQQ 634


>TC206319 similar to UP|Q9Y0C9 (Q9Y0C9) Ras interacting protein RIPA, partial
           (5%)
          Length = 1428

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 47/147 (31%), Positives = 62/147 (41%), Gaps = 21/147 (14%)
 Frame = +3

Query: 383 AKRFKPNGEVDNGMVGAAG-----MGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVES 437
           A++  P       M+G A      +G   PP+         Y++QQQ    Q+ Q     
Sbjct: 561 ARQIHPGATPSLSMLGRANTMQRPIGPMGPPKMMAGMN--LYMSQQQ----QHQQ----- 707

Query: 438 LNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQ---QLHAGVSPV-------------Q 481
             PQQ+QQ  Q Q   +L Q  QQQL+ QQQQQ+   QL + VSP              Q
Sbjct: 708 --PQQQQQ--QHQQQLQLQQHMQQQLQQQQQQQETTSQLQSVVSPPQVGSPSMGVPPLNQ 875

Query: 482 QPGQVARPPQQSLQQPSVKSCPPQAVH 508
           Q  Q A P Q S + P        A+H
Sbjct: 876 QTQQQASPQQMSQRTPMSPQMSSGAIH 956


>BQ299342 similar to GP|18139887|gb O-linked N-acetyl glucosamine transferase
           {Arabidopsis thaliana}, partial (14%)
          Length = 421

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 28/122 (22%), Positives = 55/122 (44%)
 Frame = +3

Query: 126 YHNVEAFGSKTERMTLAIRCLEKSLEADRNSGQTLYLLGRCYASIGKADHAFDAYRNVVE 185
           + N+ +   +  R+T A +C  ++L  +         LG    + G    A+  Y   + 
Sbjct: 54  WSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQGLVQEAYSCYLEALR 233

Query: 186 KTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQLKDAL 245
                A  W ++  L+ +   +  ALQ Y  AV+L      +++NLG +Y++    ++A+
Sbjct: 234 IQPTFAIAWSNLAGLFMESGDFNRALQYYKEAVKLKPSFPDAYLNLGNVYKALGMPQEAI 413

Query: 246 AC 247
           AC
Sbjct: 414 AC 419



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/74 (22%), Positives = 37/74 (49%)
 Frame = +3

Query: 180 YRNVVEKTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCS 239
           Y   +E     AD W ++   Y ++ +  +A Q    A+ ++     +  NLG L ++  
Sbjct: 12  YLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALAINPLMVDAHSNLGNLMKAQG 191

Query: 240 QLKDALACYIHSVR 253
            +++A +CY+ ++R
Sbjct: 192 LVQEAYSCYLEALR 233


>BM308932 
          Length = 429

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 33/72 (45%), Positives = 38/72 (51%)
 Frame = +1

Query: 420 LNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSP 479
           LNQQQL  L   Q   +S+   Q  Q QQ Q      QQ QQQL +QQQ QQQ H  VS 
Sbjct: 190 LNQQQLSQLMQQQ---KSMGQPQLLQQQQQQQQQPQPQQLQQQL-IQQQPQQQSHLQVSV 357

Query: 480 VQQPGQVARPPQ 491
            QQ  Q  + P+
Sbjct: 358 HQQQQQQQQSPR 393



 Score = 37.0 bits (84), Expect = 0.059
 Identities = 37/107 (34%), Positives = 44/107 (40%), Gaps = 5/107 (4%)
 Frame = +1

Query: 403 GHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQH-----HYRLMQ 457
           G A P + Q Q+       QQQL      Q +  +LN QQ  Q+ Q Q           Q
Sbjct: 106 GPAAPLRLQHQR-------QQQLGSSTQLQQNSMTLNQQQLSQLMQQQKSMGQPQLLQQQ 264

Query: 458 QHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPP 504
           Q QQQ    QQ QQQL       Q   QV+   QQ  QQ S +   P
Sbjct: 265 QQQQQQPQPQQLQQQLIQQQPQQQSHLQVSVHQQQQQQQQSPRMPGP 405



 Score = 36.6 bits (83), Expect = 0.077
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +1

Query: 442 QRQQMQQFQHHYRLMQQ----HQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQP 497
           Q Q+ QQ     +L Q     +QQQL    QQQ+ +       QQ  Q  +P  Q LQQ 
Sbjct: 130 QHQRQQQLGSSTQLQQNSMTLNQQQLSQLMQQQKSMGQPQLLQQQQQQQQQPQPQQLQQQ 309

Query: 498 SVKSCPPQAVHIPFS 512
            ++  P Q  H+  S
Sbjct: 310 LIQQQPQQQSHLQVS 354


>BI316328 
          Length = 407

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 33/72 (45%), Positives = 38/72 (51%)
 Frame = +2

Query: 420 LNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSP 479
           LNQQQL  L   Q   +S+   Q  Q QQ Q      QQ QQQL +QQQ QQQ H  VS 
Sbjct: 194 LNQQQLSQLMQQQ---KSMGQPQLLQQQQQQQQQPQPQQLQQQL-IQQQPQQQSHLQVSV 361

Query: 480 VQQPGQVARPPQ 491
            QQ  Q  + P+
Sbjct: 362 HQQQQQQQQSPR 397



 Score = 37.0 bits (84), Expect = 0.059
 Identities = 37/108 (34%), Positives = 45/108 (41%)
 Frame = +2

Query: 403 GHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQ 462
           G A P + Q Q+       QQQL      Q +  +LN QQ  Q+ Q Q      Q  QQQ
Sbjct: 110 GPAAPLRLQHQR-------QQQLGSSTQLQQNSMTLNQQQLSQLMQQQKSMGQPQLLQQQ 268

Query: 463 LRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPPQAVHIP 510
            + QQQ Q Q       +QQ     +P QQS  Q SV     Q    P
Sbjct: 269 QQQQQQPQPQ------QLQQQLIQQQPQQQSHLQVSVHQQQQQQQQSP 394



 Score = 36.6 bits (83), Expect = 0.077
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +2

Query: 442 QRQQMQQFQHHYRLMQQ----HQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQP 497
           Q Q+ QQ     +L Q     +QQQL    QQQ+ +       QQ  Q  +P  Q LQQ 
Sbjct: 134 QHQRQQQLGSSTQLQQNSMTLNQQQLSQLMQQQKSMGQPQLLQQQQQQQQQPQPQQLQQQ 313

Query: 498 SVKSCPPQAVHIPFS 512
            ++  P Q  H+  S
Sbjct: 314 LIQQQPQQQSHLQVS 358



 Score = 29.6 bits (65), Expect = 9.5
 Identities = 21/57 (36%), Positives = 25/57 (43%)
 Frame = +2

Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRM 465
           Q Q QQP P  L QQ +Q             PQQ+  +Q   H  +  QQ QQ  RM
Sbjct: 269 QQQQQQPQPQQLQQQLIQQ-----------QPQQQSHLQVSVHQQQ--QQQQQSPRM 400


>TC226371 similar to UP|Q9M0H8 (Q9M0H8) Predicted proline-rich protein,
           partial (10%)
          Length = 1099

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 37/103 (35%), Positives = 44/103 (41%), Gaps = 5/103 (4%)
 Frame = +1

Query: 407 PPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQ-----QMQQFQHHYRLMQQHQQ 461
           P  A PQ P   YL   Q    QY    + +  P   Q      +QQF H+    QQ QQ
Sbjct: 37  PNSALPQHPQNQYLPSDQ----QYRTPQLVAPQPTPSQVTPSPPVQQFSHY----QQPQQ 192

Query: 462 QLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQPSVKSCPP 504
           Q +  QQQQQQ    V P Q       PP QS  +PS  +  P
Sbjct: 193 QQQPPQQQQQQWSQQVQPSQP------PPMQSQVRPSSPNVYP 303



 Score = 31.2 bits (69), Expect = 3.3
 Identities = 32/125 (25%), Positives = 42/125 (33%), Gaps = 23/125 (18%)
 Frame = +1

Query: 316 AELPTIEEAWNTPVVSDWNSKHQPQQKRHPGMAQQGGPKPNHYVNGVNGGAVPP------ 369
           A  PT  +   +P V  ++   QPQQ++ P   QQ       +   V     PP      
Sbjct: 115 APQPTPSQVTPSPPVQQFSHYQQPQQQQQPPQQQQ-----QQWSQQVQPSQPPPMQSQVR 279

Query: 370 PPYPGAVPGAGPN-AKRFKPNGEVDNGMV----------------GAAGMGHARPPQAQP 412
           P  P   P   PN A    P   + N M                  A   G+    +  P
Sbjct: 280 PSSPNVYPPYQPNQATNPSPAETLPNSMAMQMPYSGVPPQGSNRADAIPYGYGGAGRTVP 459

Query: 413 QQPPP 417
           QQPPP
Sbjct: 460 QQPPP 474


>TC231862 similar to GB|AAL60196.1|18139887|AF441079 O-linked N-acetyl
           glucosamine transferase {Arabidopsis thaliana;} ,
           partial (25%)
          Length = 750

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 19/73 (26%), Positives = 40/73 (54%)
 Frame = +1

Query: 180 YRNVVEKTTPTADVWCSIGVLYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCS 239
           Y+  +  TT  +  + ++ ++Y+QQ  YVDA+  Y   +++D   +   +N G  Y+   
Sbjct: 253 YKATLNVTTGLSAPYNNLAIIYKQQGNYVDAISCYNEVLRIDPLAADGLVNRGNTYKEIG 432

Query: 240 QLKDALACYIHSV 252
           ++ DA+  YI ++
Sbjct: 433 RVSDAIQDYIRAI 471



 Score = 33.5 bits (75), Expect = 0.66
 Identities = 22/74 (29%), Positives = 32/74 (42%), Gaps = 1/74 (1%)
 Frame = +1

Query: 200 LYQQQKQYVDALQAYVCAVQLDKCHSASWINLGILYESCSQLKDALACYIHSVRASKDKA 259
           +Y +      A Q Y   + +    SA + NL I+Y+      DA++CY   +R     A
Sbjct: 211 IYMEWNMVAAAAQYYKATLNVTTGLSAPYNNLAIIYKQQGNYVDAISCYNEVLRIDPLAA 390

Query: 260 AG-VGSGTTSSESG 272
            G V  G T  E G
Sbjct: 391 DGLVNRGNTYKEIG 432


>TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
           (AtAGP4) (AT5g10430/F12B17_220), partial (50%)
          Length = 966

 Score = 39.3 bits (90), Expect(2) = 0.001
 Identities = 19/55 (34%), Positives = 27/55 (48%)
 Frame = +3

Query: 429 QYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQP 483
           Q+   H     P  +Q   Q Q H++    HQQQ + Q Q  Q+LH  + P+ QP
Sbjct: 255 QHLHQHPPHQQPHHQQPHHQQQLHHQQQLHHQQQHQHQHQHHQRLHLHLLPLLQP 419



 Score = 22.7 bits (47), Expect(2) = 0.001
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 399 AAGMGHARPPQAQPQQPPP 417
           A G   ++PP   P  PPP
Sbjct: 194 APGAAPSQPPTTTPSPPPP 250


>BF071504 
          Length = 422

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 28/59 (47%), Positives = 34/59 (57%)
 Frame = +1

Query: 420 LNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVS 478
           L+QQQ Q  Q  Q   + L   Q+QQ QQ Q HY L+    QQL+ QQQQ QQ  A +S
Sbjct: 211 LHQQQQQQQQQQQQQQQLL--LQQQQQQQHQQHYLLL----QQLQKQQQQHQQQAAAIS 369



 Score = 38.9 bits (89), Expect = 0.016
 Identities = 31/83 (37%), Positives = 41/83 (49%)
 Frame = +1

Query: 425 LQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPG 484
           L LL       ++L+ QQ+QQ QQ        QQ QQQL +QQQQQQQ       +Q   
Sbjct: 172 LLLLCEKMEEAKALHQQQQQQQQQ--------QQQQQQLLLQQQQQQQHQQHYLLLQ--- 318

Query: 485 QVARPPQQSLQQPSVKSCPPQAV 507
           Q+ +  QQ  QQ +  S  P  +
Sbjct: 319 QLQKQQQQHQQQAAAISRFPSNI 387


>BE807600 similar to GP|24461867|gb CTV.22 {Poncirus trifoliata}, partial
           (4%)
          Length = 414

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 33/98 (33%), Positives = 39/98 (39%)
 Frame = +3

Query: 376 VPGAGPNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHV 435
           +PG          N  + N   G+      R  Q  PQQ      N QQ    Q  Q  +
Sbjct: 144 IPGQNSVGSTISQNSNMQNMFPGSQRQIQGRQ-QVVPQQQQQQSQNSQQYIYQQQMQHQL 320

Query: 436 ESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQL 473
                QQ+QQ QQ        QQ QQQ + QQQQQQ L
Sbjct: 321 LRQKLQQQQQQQQ--------QQQQQQQQQQQQQQQNL 410



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 27/92 (29%), Positives = 40/92 (43%)
 Frame = +3

Query: 381 PNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNP 440
           PN +       V + +   + M +  P   +  Q     + QQQ Q  Q  Q ++     
Sbjct: 129 PNMQNIPGQNSVGSTISQNSNMQNMFPGSQRQIQGRQQVVPQQQQQQSQNSQQYIYQQQM 308

Query: 441 QQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQ 472
           Q +   Q+ Q   +  QQ QQQ + QQQQQQQ
Sbjct: 309 QHQLLRQKLQQQQQQQQQQQQQQQQQQQQQQQ 404



 Score = 38.1 bits (87), Expect = 0.027
 Identities = 26/60 (43%), Positives = 30/60 (49%), Gaps = 3/60 (5%)
 Frame = +3

Query: 440 PQQRQQMQQFQHHYRLMQQHQQQL---RMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQ 496
           PQQ+QQ  Q    Y   QQ Q QL   ++QQQQQQQ        QQ  Q  +  QQ  QQ
Sbjct: 249 PQQQQQQSQNSQQYIYQQQMQHQLLRQKLQQQQQQQ--------QQQQQQQQQQQQQQQQ 404


>TC215490 weakly similar to UP|Q8I7C3 (Q8I7C3) Lasp protein, partial (7%)
          Length = 715

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 36/96 (37%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
 Frame = +3

Query: 409 QAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQ-QHQQQLRMQQ 467
           Q Q     P YL QQQ +  Q  QS  +    Q +Q   Q QH +   Q QHQQ L   Q
Sbjct: 327 QMQQHVHDPGYLLQQQFEQHQQLQSQQQQQFEQHQQLQSQPQHQFEQHQHQHQQTL--PQ 500

Query: 468 QQQQQLHAGVSPVQQPGQVA----RPPQQSLQQPSV 499
           QQQQ +H        P   A     P QQ  Q P V
Sbjct: 501 QQQQFIHGAHFIHHNPAIPAYYPVYPSQQHPQHPQV 608



 Score = 34.7 bits (78), Expect = 0.29
 Identities = 46/165 (27%), Positives = 62/165 (36%), Gaps = 6/165 (3%)
 Frame = +3

Query: 338 QPQ---QKRHPGMAQQGGPKPNHYVNGVNGGAVPPPPYPGAVPGAGPNAKRFKPNGEVDN 394
           QPQ   Q +    AQ     P  +     GGAV   P P +V                D+
Sbjct: 54  QPQVQSQTQAQSQAQTQTLAPQFHQKSTAGGAVVDLPSPDSVSS--------------DS 191

Query: 395 GMVGAAGMGHARPPQAQPQ-QPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHH- 452
            +  A     A   Q Q Q QP    +    +      + +V  L+   R QMQQ  H  
Sbjct: 192 SLANAISRSKAAVYQEQAQIQPGTTRVPSNPVDP----KLNVSDLHG--RIQMQQHVHDP 353

Query: 453 -YRLMQQHQQQLRMQQQQQQQLHAGVSPVQQPGQVARPPQQSLQQ 496
            Y L QQ +Q  ++Q QQQQQ        +Q  Q+   PQ   +Q
Sbjct: 354 GYLLQQQFEQHQQLQSQQQQQF-------EQHQQLQSQPQHQFEQ 467


>TC220969 similar to UP|Q94IB3 (Q94IB3) WRKY DNA-binding protein, partial
           (8%)
          Length = 677

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 47/151 (31%), Positives = 62/151 (40%), Gaps = 9/151 (5%)
 Frame = +1

Query: 353 PKPNHYVNGVNGGAVPPPPY-----PGAVPGAGPNAKRFKPNGEVDNGMVGAAGMGHARP 407
           P+P+   NG+  G +  P       PG       +   F  N  + + +V  +G+GHA+ 
Sbjct: 76  PEPSQVHNGI--GRLERPSLGSFNLPGRQQLGPSHGFSFGMNQSMLSNLV-MSGLGHAQA 246

Query: 408 PQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQ 467
               P  P   +L  QQ                QQRQQ QQ Q H +  QQHQQQ   QQ
Sbjct: 247 KL--PVMPVHPFLAAQQQH--------------QQRQQHQQQQQHQQQQQQHQQQ---QQ 369

Query: 468 QQQQQLHAG----VSPVQQPGQVARPPQQSL 494
            QQQQ  A     + P  +P   A P    L
Sbjct: 370 HQQQQCAANDLGFMLPKGEPNVEAIPEHGGL 462


>TC225777 weakly similar to UP|Q868B4 (Q868B4) C. elegans GRL-25 protein
           (Corresponding sequence ZK643.8), partial (7%)
          Length = 762

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
 Frame = +3

Query: 406 RPPQAQPQQPPPYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRM 465
           +PP  Q QQPP   L Q   Q  Q + +  +   P Q    QQ    + L Q H  Q  +
Sbjct: 156 QPPVQQQQQPPQQQLQQPPQQPPQQHLAPQQL--PPQPPIFQQTYPPFHLPQFHHHQPSL 329

Query: 466 QQQQQQQLHAGVSPVQQPGQV----ARPPQQSLQQP 497
           Q QQQQQ      P Q P Q+    A+PP      P
Sbjct: 330 QFQQQQQ-----QPPQPPPQLFQHQAQPPSHQQFHP 422


>AW460156 similar to GP|18033922|gb SEUSS transcriptional co-regulator
           {Arabidopsis thaliana}, partial (12%)
          Length = 429

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
 Frame = +3

Query: 407 PPQAQPQQPP-PYYLNQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQ---QHQQQ 462
           P + +PQ    P +L QQQ Q  Q +  H+ S + Q          H+RL+Q   QHQQQ
Sbjct: 111 PVKMEPQHSDQPLFLQQQQQQQQQQFL-HMSSQSSQAAAAQINLLRHHRLLQLQQQHQQQ 287

Query: 463 LRMQ-------------QQQQQQLHAGVSPVQQPGQVAR 488
             ++             QQQ   + +   P  +PG  AR
Sbjct: 288 QLLKAMPQQRSQLPQQFQQQNMSMRSPAKPAYEPGMCAR 404



 Score = 34.7 bits (78), Expect = 0.29
 Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 15/109 (13%)
 Frame = +3

Query: 420 LNQQQLQLLQYYQSHVE-SLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQ-----L 473
           L QQQ Q LQ  ++     L PQQ Q M+      ++  QH  Q    QQQQQQ     L
Sbjct: 15  LGQQQQQQLQSLRNLASVKLEPQQMQTMRTLGP-VKMEPQHSDQPLFLQQQQQQQQQQFL 191

Query: 474 HAGVSPVQQPG---------QVARPPQQSLQQPSVKSCPPQAVHIPFSF 513
           H      Q            ++ +  QQ  QQ  +K+ P Q   +P  F
Sbjct: 192 HMSSQSSQAAAAQINLLRHHRLLQLQQQHQQQQLLKAMPQQRSQLPQQF 338


>CO979245 
          Length = 730

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
 Frame = +3

Query: 306 KTPMPSITSKAELPTIEEAWNTPVVSDWNSKHQP----QQKRHPGMAQQGGPKPNHYV-- 359
           K P+P + + A  P  E A   P V +   K  P      K  PG+A    P P      
Sbjct: 90  KPPLPWLLN-APKPPPEPAPANPPVEEAAPKPTPGAAAPAKPPPGVAAAPKPPPGAAAAP 266

Query: 360 NGVNGGAVPPPPYPGAVPGAGPNAKRFKPNGEVDNGMVGAAGMGHARPPQAQPQQPPPYY 419
             + G A PP P PGA P   P  +    N  +       A +   RP  A P  PPP  
Sbjct: 267 KPLPGAAAPPKPPPGAAPPPNPPPEAIPENPPLPVD----ATLPKPRPVDAMPANPPPIA 434

Query: 420 LNQQQL 425
           + ++ L
Sbjct: 435 VFEKPL 452



 Score = 33.1 bits (74), Expect = 0.86
 Identities = 24/62 (38%), Positives = 30/62 (47%)
 Frame = +1

Query: 421 NQQQLQLLQYYQSHVESLNPQQRQQMQQFQHHYRLMQQHQQQLRMQQQQQQQLHAGVSPV 480
           N    QLLQ +Q   +  N  Q QQ QQ  +H++  QQHQ     Q +QQ Q H    P 
Sbjct: 124 NHHLNQLLQIHQ*KKQHQNQHQGQQHQQ--NHHQGWQQHQN--HHQGRQQHQNHCQGQPP 291

Query: 481 QQ 482
            Q
Sbjct: 292 HQ 297


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.324    0.136    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,193,108
Number of Sequences: 63676
Number of extensions: 1221952
Number of successful extensions: 20643
Number of sequences better than 10.0: 254
Number of HSP's better than 10.0 without gapping: 12137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17317
length of query: 1366
length of database: 12,639,632
effective HSP length: 109
effective length of query: 1257
effective length of database: 5,698,948
effective search space: 7163577636
effective search space used: 7163577636
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)


Medicago: description of AC139744.2