BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139601.2 - phase: 0
(352 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC216146 similar to UP|Q7Y256 (Q7Y256) Beta-cyanoalanine synthas... 640 0.0
TC226709 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase (B... 423 e-119
TC227211 UP|Q8W1A0 (Q8W1A0) Cysteine synthase, complete 417 e-117
TC204859 similar to UP|Q9FS26 (Q9FS26) Plastidic cysteine syntha... 319 1e-87
TC220787 homologue to UP|O65747 (O65747) Cysteine synthase, O-ac... 273 7e-74
TC204856 similar to UP|CYSL_ARATH (P47999) Cysteine synthase, ch... 236 9e-63
TC229951 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragm... 236 1e-62
TC221992 homologue to UP|Q81J79 (Q81J79) Cysteine synthase , pa... 221 4e-58
TC231114 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragm... 176 1e-44
TC212759 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragm... 175 2e-44
BU548116 142 1e-41
TC219764 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase (B... 143 6e-39
BE610004 150 1e-36
AW201485 131 4e-31
BQ741579 similar to GP|18252506|gb cysteine synthase {Glycine ma... 121 5e-28
TC204858 similar to UP|Q9FS25 (Q9FS25) Plastidic cysteine syntha... 110 1e-24
TC224199 similar to UP|Q6NKY5 (Q6NKY5) At1g55880, partial (46%) 97 1e-20
BI469719 95 4e-20
BM309180 similar to GP|4996618|dbj| cysteine synthase {Arabidops... 85 6e-17
AW133089 82 5e-16
>TC216146 similar to UP|Q7Y256 (Q7Y256) Beta-cyanoalanine synthase, partial
(96%)
Length = 1431
Score = 640 bits (1650), Expect = 0.0
Identities = 323/351 (92%), Positives = 333/351 (94%)
Frame = +1
Query: 2 RRLMTTTATSADSSSFAQRIRDLPKDLPGTNIKKHVSQLIGRTPLVYLNKVTEGCGAYIA 61
R TTTAT DS S AQRIRDLPKDLPGTNIKKHVSQLIGRTPLVYLNKVTEGCGAY+A
Sbjct: 226 RLFSTTTATIIDSPSLAQRIRDLPKDLPGTNIKKHVSQLIGRTPLVYLNKVTEGCGAYVA 405
Query: 62 VKQEMMQPTASIKDRPALAMMEDAEKKNLITPGKTILIEPTSGNMGISLAFMAAMKGYKM 121
VKQEMMQPTASIKDRPA AM+ DAE+KNLITPGKT LIEPTSGNMGIS+AFMAAMKGYKM
Sbjct: 406 VKQEMMQPTASIKDRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKM 585
Query: 122 VLTMPSYTSLERRVCMRAFGAELILTDPTKGMGGTVKKAYDLLESTPNAFMLQQFSNPAN 181
VLTMPSYTSLERRV MR FGAELILTDP KGMGGTVKKAY+LLE+TPNA MLQQFSNPAN
Sbjct: 586 VLTMPSYTSLERRVTMRVFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPAN 765
Query: 182 TKVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNVL 241
T+VHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKS+NPNVKIYGVEPSESNVL
Sbjct: 766 TQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVL 945
Query: 242 NGGKPGPHQITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMARTLALKEGLMVGISSGAN 301
NGGKPGPH ITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMAR LALKEGLMVGISSGAN
Sbjct: 946 NGGKPGPHHITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGAN 1125
Query: 302 TVAALRLASLPENKGKLIVTVHPSFGERYLSSVLFQDLRTEAENMQPVSVD 352
TVAALRLA LPENKGKLIVTVHPSFGERYLSSVLFQ+LR EAENMQPV+VD
Sbjct: 1126TVAALRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENMQPVAVD 1278
>TC226709 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase
(Beta-pyrazolylalanine synthase) (Beta-PA/CSase)
(L-mimosine synthase) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) ,
complete
Length = 1350
Score = 423 bits (1087), Expect = e-119
Identities = 197/316 (62%), Positives = 261/316 (82%)
Frame = +2
Query: 31 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKKNL 90
+NI K V++LIG+TPLVYLN + +GC A +A K EMM+P +S+KDR +M+ DAE+K L
Sbjct: 224 SNIAKDVTELIGKTPLVYLNHIVDGCVAKVAAKLEMMEPCSSVKDRIGYSMIVDAEEKGL 403
Query: 91 ITPGKTILIEPTSGNMGISLAFMAAMKGYKMVLTMPSYTSLERRVCMRAFGAELILTDPT 150
ITPG+++LIEPTSGN GI LAFMAA KGYK+++TMPS SLERR +RAFGAEL+LTDP
Sbjct: 404 ITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPSSMSLERRTILRAFGAELVLTDPA 583
Query: 151 KGMGGTVKKAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGS 210
KGM G V+KA ++ + TPN++MLQQF NPAN KVH+ETTGPEIW+ ++G+VD V GIG+
Sbjct: 584 KGMKGAVQKAEEIRDKTPNSYMLQQFENPANPKVHYETTGPEIWKGSSGKVDALVSGIGT 763
Query: 211 GGTVSGVGQYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILDMDVMEK 270
GGT++G G+YLK QNP++K+YG+EP ES +L+GGKPGPH+I G G GF P +LD+D++++
Sbjct: 764 GGTITGAGKYLKEQNPDIKLYGIEPVESPILSGGKPGPHKIQGIGAGFIPGVLDVDLLDE 943
Query: 271 VLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGKLIVTVHPSFGERY 330
V+++SSE+A+ A+ LALKEGL+VGISSGA AA+++A PEN GKLI+ V PSFGERY
Sbjct: 944 VVQISSEEAIETAKLLALKEGLLVGISSGAAAAAAIKIAKRPENAGKLIIAVFPSFGERY 1123
Query: 331 LSSVLFQDLRTEAENM 346
LSSVLF+ ++ EAE+M
Sbjct: 1124LSSVLFESVKREAESM 1171
>TC227211 UP|Q8W1A0 (Q8W1A0) Cysteine synthase, complete
Length = 1256
Score = 417 bits (1071), Expect = e-117
Identities = 196/316 (62%), Positives = 259/316 (81%)
Frame = +2
Query: 31 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKKNL 90
+ I K V++LIG+TPLVYLNK+ +GC A +A K E+M+P +S+KDR +M+ DAE+K L
Sbjct: 104 SGIAKDVTELIGKTPLVYLNKLADGCVARVAAKLELMEPCSSVKDRIGYSMIADAEEKGL 283
Query: 91 ITPGKTILIEPTSGNMGISLAFMAAMKGYKMVLTMPSYTSLERRVCMRAFGAELILTDPT 150
ITPGK++LIEPTSGN GI LAFMAA +GYK+++TMP+ SLERR+ + AFGAEL+LTDP
Sbjct: 284 ITPGKSVLIEPTSGNTGIGLAFMAAARGYKLIITMPASMSLERRIILLAFGAELVLTDPA 463
Query: 151 KGMGGTVKKAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGS 210
KGM G V+KA ++L TPNA++LQQF NPAN KVH+ETTGPEIW+ ++G++D FV GIG+
Sbjct: 464 KGMKGAVQKAEEILAKTPNAYILQQFENPANPKVHYETTGPEIWKGSDGKIDAFVSGIGT 643
Query: 211 GGTVSGVGQYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILDMDVMEK 270
GGT++G G+YLK QNPN+K+ GVEP ES VL+GGKPGPH+I G G GF P +L+++++++
Sbjct: 644 GGTITGAGKYLKEQNPNIKLIGVEPVESPVLSGGKPGPHKIQGIGAGFIPGVLEVNLLDE 823
Query: 271 VLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGKLIVTVHPSFGERY 330
V+++SS++A+ A+ LALKEGL VGISSGA AA ++A PEN GKLIV V PSFGERY
Sbjct: 824 VIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAFQIAKRPENAGKLIVAVFPSFGERY 1003
Query: 331 LSSVLFQDLRTEAENM 346
LSSVLF+ +R EAE+M
Sbjct: 1004LSSVLFESVRREAESM 1051
>TC204859 similar to UP|Q9FS26 (Q9FS26) Plastidic cysteine synthase 1,
partial (63%)
Length = 1092
Score = 319 bits (817), Expect = 1e-87
Identities = 153/241 (63%), Positives = 192/241 (79%)
Frame = +3
Query: 108 ISLAFMAAMKGYKMVLTMPSYTSLERRVCMRAFGAELILTDPTKGMGGTVKKAYDLLEST 167
I LAF+AA +GYK++LTMP+ SLERRV ++AFG L LTD KGM G V+KA ++L+ST
Sbjct: 3 IGLAFIAASRGYKLILTMPASMSLERRVFLKAFGFLLGLTDAAKGMNGAVQKAEEILKST 182
Query: 168 PNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSQNPN 227
PN++MLQQF NP+N KVH+ETTGPEIWEDT G++DI V GIG+GGTVSG GQ+LK QNP
Sbjct: 183 PNSYMLQQFDNPSNPKVHYETTGPEIWEDTRGKIDILVAGIGTGGTVSGAGQFLKQQNPK 362
Query: 228 VKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMARTLA 287
+++ GVEP ESN+L GGKPGPH+I G G GF P LD DV+++V+ +SS++AV A+ LA
Sbjct: 363 IQVIGVEPLESNILTGGKPGPHKIQGIGAGFVPRNLDQDVLDEVIAISSDEAVETAKQLA 542
Query: 288 LKEGLMVGISSGANTVAALRLASLPENKGKLIVTVHPSFGERYLSSVLFQDLRTEAENMQ 347
L+EGL+VGISSGA AAL++ PEN GKLI V PSFGERYLS++LFQ +R E E MQ
Sbjct: 543 LQEGLLVGISSGAAAAAALKVGKRPENAGKLIGVVFPSFGERYLSTILFQSIREECEKMQ 722
Query: 348 P 348
P
Sbjct: 723 P 725
>TC220787 homologue to UP|O65747 (O65747) Cysteine synthase,
O-acetyl-L-serine (Thiol)-lyase (Fragment) , partial
(77%)
Length = 797
Score = 273 bits (699), Expect = 7e-74
Identities = 125/203 (61%), Positives = 167/203 (81%)
Frame = +3
Query: 144 LILTDPTKGMGGTVKKAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDI 203
L+LTDP KGM G V+KA ++L+ TPNA++LQQF NPAN KVH+ETTGPEIWE T G+VD
Sbjct: 3 LVLTDPAKGMKGAVQKAEEILDKTPNAYILQQFENPANPKVHYETTGPEIWEGTRGKVDA 182
Query: 204 FVMGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDIL 263
V GIG+GGT++G G++LK +NPN+K+YGVEP ES VL+GGKPGPH+I G G GF P +L
Sbjct: 183 LVSGIGTGGTITGAGKFLKEKNPNIKLYGVEPVESPVLSGGKPGPHKIQGIGAGFVPGVL 362
Query: 264 DMDVMEKVLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGKLIVTVH 323
++ ++++V+++SS++A+ A+ LAL+EGL VGISSGA AA+++A PEN GKLIV +
Sbjct: 363 EVSLVDEVVQISSDEAIETAKLLALQEGLFVGISSGAAAAAAIKIAKRPENAGKLIVVIF 542
Query: 324 PSFGERYLSSVLFQDLRTEAENM 346
PSFGERYLSSVLF+ +R EAE++
Sbjct: 543 PSFGERYLSSVLFESVRREAESL 611
>TC204856 similar to UP|CYSL_ARATH (P47999) Cysteine synthase, chloroplast
precursor (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL
B) (AtCS-B) (cpACS1) (At.OAS.7-4) , partial (49%)
Length = 857
Score = 236 bits (603), Expect = 9e-63
Identities = 113/199 (56%), Positives = 153/199 (76%), Gaps = 1/199 (0%)
Frame = +3
Query: 5 MTTTATSADSSSFAQRIRDLPK-DLPGTNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVK 63
+TT +S+ S+ + + P+ + G NI V+QLIG+TP+VYLN + +G A IA K
Sbjct: 261 LTTRISSSPSTVVCKAVSVKPQTETEGLNIADDVTQLIGKTPMVYLNNIVKGSVANIAAK 440
Query: 64 QEMMQPTASIKDRPALAMMEDAEKKNLITPGKTILIEPTSGNMGISLAFMAAMKGYKMVL 123
E+M+P S+KDR +M+ DAE++ ITPGK+IL+EPTSGN GI LAF+AA +GYK++L
Sbjct: 441 LEIMEPCCSVKDRIGFSMINDAEQRGAITPGKSILVEPTSGNTGIGLAFIAASRGYKLIL 620
Query: 124 TMPSYTSLERRVCMRAFGAELILTDPTKGMGGTVKKAYDLLESTPNAFMLQQFSNPANTK 183
TMP+ SLERRV ++AFGAEL+LTD KGM G V+KA ++L+STPNA+MLQQF NP+N K
Sbjct: 621 TMPASMSLERRVLLKAFGAELVLTDAAKGMNGAVQKAEEILKSTPNAYMLQQFDNPSNPK 800
Query: 184 VHFETTGPEIWEDTNGQVD 202
+H+ETTGPEIWEDT G++D
Sbjct: 801 IHYETTGPEIWEDTRGKID 857
>TC229951 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragment) ,
partial (59%)
Length = 832
Score = 236 bits (602), Expect = 1e-62
Identities = 112/188 (59%), Positives = 145/188 (76%)
Frame = +3
Query: 159 KAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVG 218
KA +LL TP+AFM QF NPAN K+H+ETTGPEIW D+ G+VD V GIG+GGT++G G
Sbjct: 3 KAEELLRETPDAFMPHQFENPANPKIHYETTGPEIWTDSGGKVDALVAGIGTGGTITGAG 182
Query: 219 QYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILDMDVMEKVLEVSSED 278
++LK +NP +K+YGVEP ES VL+GG+PG H I G G G P +LD+++++++L+VSSE+
Sbjct: 183 KFLKERNPKIKVYGVEPVESAVLSGGQPGGHLIQGIGAGIVPAVLDVNLLDEILQVSSEE 362
Query: 279 AVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGKLIVTVHPSFGERYLSSVLFQD 338
A+ A+ LALKEGL+VGISSGA AA++L PEN KLIV V PS GERYLSS LF+
Sbjct: 363 AIETAKLLALKEGLLVGISSGAAAAAAIKLGKRPENADKLIVVVFPSSGERYLSSPLFES 542
Query: 339 LRTEAENM 346
+R EAE M
Sbjct: 543 IRQEAEQM 566
>TC221992 homologue to UP|Q81J79 (Q81J79) Cysteine synthase , partial (91%)
Length = 893
Score = 221 bits (563), Expect = 4e-58
Identities = 112/224 (50%), Positives = 156/224 (69%)
Frame = +1
Query: 86 EKKNLITPGKTILIEPTSGNMGISLAFMAAMKGYKMVLTMPSYTSLERRVCMRAFGAELI 145
+KK L+ G TI IEPTSGN GI LA +AA KGY +L MP S+ERR +RA+GAEL+
Sbjct: 217 KKKGLLKEGDTI-IEPTSGNTGIGLAMVAAAKGYNAILVMPETMSIERRNLLRAYGAELV 393
Query: 146 LTDPTKGMGGTVKKAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFV 205
LT +GMGG ++KA +L + F+ QQF N +N ++H TTGPEI E Q+D F+
Sbjct: 394 LTPGPEGMGGAIRKATELAKEH-GYFIPQQFKNQSNPEIHRLTTGPEIIEQMGDQLDAFI 570
Query: 206 MGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILDM 265
GIG+GGT++G G+ LK +KIY VEP++S VL+GGKPGPH+I G G GF P+ LD+
Sbjct: 571 AGIGTGGTITGAGEVLKEAYEGIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPETLDV 750
Query: 266 DVMEKVLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLA 309
+V ++++++ +E A AR +A +EG++VGISSG+ AA +A
Sbjct: 751 EVYDEIIQLKTEQAFEYARRVAKEEGILVGISSGSVIYAATEVA 882
Score = 68.9 bits (167), Expect = 3e-12
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +3
Query: 30 GTNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKKN 89
G + + VS+LIG+TP+V LN++ E A I +K E M P +S+KDR ALAM+EDAEKK
Sbjct: 48 GMRVAQSVSELIGKTPIVKLNRIVESDSADIYLKLEFMNPGSSVKDRIALAMIEDAEKKG 227
Query: 90 LITPGK 95
++ G+
Sbjct: 228 IVKRGR 245
>TC231114 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragment) ,
partial (45%)
Length = 459
Score = 176 bits (447), Expect = 1e-44
Identities = 81/142 (57%), Positives = 114/142 (80%)
Frame = +3
Query: 205 VMGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILD 264
V GIG+GG+++G G++L+ +NP++K+YGVEP+ES VLNGG+PG H I G G G P +LD
Sbjct: 6 VAGIGTGGSIAGAGRFLREKNPDIKLYGVEPAESPVLNGGQPGKHLIQGIGAGIIPKVLD 185
Query: 265 MDVMEKVLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGKLIVTVHP 324
++++++V++VSSE+A+ A+ LALKEGL++GISSGA AA+++ PEN GKLIV + P
Sbjct: 186 VNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVGKRPENAGKLIVVIFP 365
Query: 325 SFGERYLSSVLFQDLRTEAENM 346
SFGERYLSS LF+ +R EAE M
Sbjct: 366 SFGERYLSSPLFESIRKEAEQM 431
>TC212759 similar to UP|Q6STL6 (Q6STL6) Cysteine synthase (Fragment) ,
partial (42%)
Length = 464
Score = 175 bits (444), Expect = 2e-44
Identities = 84/139 (60%), Positives = 108/139 (77%)
Frame = +3
Query: 29 PGTNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKK 88
P IKK ++LIG TP+VYLN + +GC A IA K E MQ S+KDR AL+M+EDAEKK
Sbjct: 48 PQCRIKKDATELIGNTPMVYLNNIVDGCVARIAAKLEYMQACCSVKDRIALSMIEDAEKK 227
Query: 89 NLITPGKTILIEPTSGNMGISLAFMAAMKGYKMVLTMPSYTSLERRVCMRAFGAELILTD 148
LITPGKT+L+E TSGN GI LAF+AA++GYK+ +TMPSY SLER++ +RAFGAE+ LTD
Sbjct: 228 GLITPGKTVLVEYTSGNTGIGLAFIAALRGYKLQVTMPSYVSLERKIILRAFGAEVYLTD 407
Query: 149 PTKGMGGTVKKAYDLLEST 167
P KG+ G ++KA +L+ T
Sbjct: 408 PAKGIDGVIQKAEELIAKT 464
>BU548116
Length = 624
Score = 142 bits (359), Expect(2) = 1e-41
Identities = 68/114 (59%), Positives = 87/114 (75%)
Frame = -2
Query: 205 VMGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILD 264
V GIG+GGT GVGQ+LK QNP +++ GVEP ESN+L GGKPGPH+I G G GF P LD
Sbjct: 623 VAGIGTGGTXXGVGQFLKQQNPKIQVIGVEPLESNILTGGKPGPHKIQGIGAGFVPRNLD 444
Query: 265 MDVMEKVLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGKL 318
DV+++V+ +SS++AV A+ LAL+EGL+VGISSGA AAL++ PEN G L
Sbjct: 443 QDVLDEVIAISSDEAVETAKQLALQEGLLVGISSGAAAAAALKVGKRPENAGCL 282
Score = 45.4 bits (106), Expect(2) = 1e-41
Identities = 20/34 (58%), Positives = 25/34 (72%)
Frame = -3
Query: 315 KGKLIVTVHPSFGERYLSSVLFQDLRTEAENMQP 348
+G + V PSFGERYLS++LFQ +R E E MQP
Sbjct: 307 RGLRMQVVFPSFGERYLSTILFQSIREECEKMQP 206
>TC219764 similar to UP|CYSK_CITLA (Q43317) Cysteine synthase
(Beta-pyrazolylalanine synthase) (Beta-PA/CSase)
(L-mimosine synthase) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) ,
partial (42%)
Length = 750
Score = 143 bits (360), Expect(2) = 6e-39
Identities = 61/110 (55%), Positives = 87/110 (78%)
Frame = +3
Query: 181 NTKVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNV 240
N K+H+ETTGPEIW D+ G+VD V G+G+GGT++G G++LK +NPNVK+YG+EP ES V
Sbjct: 3 NPKIHYETTGPEIWRDSGGKVDALVAGVGTGGTITGAGRFLKERNPNVKLYGIEPVESAV 182
Query: 241 LNGGKPGPHQITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMARTLALKE 290
L+GG PG H I G G G P +LD +++++V+++SSE+A+ A+ LALKE
Sbjct: 183 LSGGPPGDHLIQGIGNGLIPSVLDFNLLDEVIQISSEEAIETAKLLALKE 332
Score = 35.8 bits (81), Expect(2) = 6e-39
Identities = 17/27 (62%), Positives = 20/27 (73%)
Frame = +1
Query: 294 VGISSGANTVAALRLASLPENKGKLIV 320
+GISSGA AA++L PEN GKLIV
Sbjct: 334 MGISSGAAAAAAIKLGKKPENAGKLIV 414
>BE610004
Length = 373
Score = 150 bits (378), Expect = 1e-36
Identities = 65/105 (61%), Positives = 87/105 (81%)
Frame = +2
Query: 126 PSYTSLERRVCMRAFGAELILTDPTKGMGGTVKKAYDLLESTPNAFMLQQFSNPANTKVH 185
P+ SLERR+ + GAEL+LTDP KGM G V+KA ++L +TPNA++LQQF NPAN KVH
Sbjct: 59 PASMSLERRIILLPLGAELVLTDPAKGMKGAVQKAEEILSNTPNAYILQQFENPANPKVH 238
Query: 186 FETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSQNPNVKI 230
+ETTGPEIW+ ++G++D FV GIG+GGT++G G+YLK QNPN+K+
Sbjct: 239 YETTGPEIWKGSDGKIDAFVSGIGTGGTITGAGKYLKEQNPNIKV 373
>AW201485
Length = 411
Score = 131 bits (330), Expect = 4e-31
Identities = 63/106 (59%), Positives = 81/106 (75%)
Frame = +1
Query: 29 PGTNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKK 88
P IKK V++LIG TP+VYLN + EGC A IA K E MQP SIKDR A +M++DAE K
Sbjct: 94 PQCAIKKDVTELIGNTPMVYLNNIVEGCVARIAAKLESMQPCFSIKDRTAFSMIKDAEDK 273
Query: 89 NLITPGKTILIEPTSGNMGISLAFMAAMKGYKMVLTMPSYTSLERR 134
LITPGK++L+E TSGN GI +AF+A +KGYK+++ MP+ SLER+
Sbjct: 274 GLITPGKSVLVEATSGNTGIGMAFVATLKGYKVIVAMPASVSLERK 411
>BQ741579 similar to GP|18252506|gb cysteine synthase {Glycine max}, partial
(30%)
Length = 452
Score = 121 bits (303), Expect = 5e-28
Identities = 58/95 (61%), Positives = 76/95 (79%)
Frame = +3
Query: 31 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKKNL 90
+ I K V LIG+TP+VYLNK+ +G A +A K E+M+P +S+KDR A +M+ DAEKK L
Sbjct: 168 SGIAKDVFLLIGKTPIVYLNKIADGSVARVAAKLELMEPCSSVKDRIAYSMIADAEKKGL 347
Query: 91 ITPGKTILIEPTSGNMGISLAFMAAMKGYKMVLTM 125
ITPG++ILIEPTSGN GI LAF+AA KGYK+++TM
Sbjct: 348 ITPGQSILIEPTSGNTGIGLAFLAAAKGYKLIITM 452
>TC204858 similar to UP|Q9FS25 (Q9FS25) Plastidic cysteine synthase 2,
partial (24%)
Length = 614
Score = 110 bits (275), Expect = 1e-24
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +2
Query: 258 FKPDILDMDVMEKVLEVSSEDAVNMARTLALKEGLMVGISSGANTVAALRLASLPENKGK 317
F P LD DV+++V+ +SS++AV AR LAL+EGL+VGISSGA AAL++ PEN GK
Sbjct: 2 FVPRNLDQDVLDEVIAISSDEAVETARQLALQEGLLVGISSGAAAAAALKVGKRPENAGK 181
Query: 318 LIVTVHPSFGERYLSSVLFQDLRTEAENMQP 348
LI V PSFGERYLS++LFQ +R E E MQP
Sbjct: 182 LIGVVFPSFGERYLSTILFQSIREECEKMQP 274
>TC224199 similar to UP|Q6NKY5 (Q6NKY5) At1g55880, partial (46%)
Length = 726
Score = 96.7 bits (239), Expect = 1e-20
Identities = 59/169 (34%), Positives = 87/169 (50%), Gaps = 17/169 (10%)
Frame = +3
Query: 181 NTKVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSQNPNVKIYGVEPSESNV 240
N + H+E TGPEIWE TNG++D FV G+GGTV+GV ++L+ +NPN+K + ++P S +
Sbjct: 3 NFRAHYEGTGPEIWEQTNGKLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCFLLDPPGSGL 182
Query: 241 LNGGKPG---------------PHQITGNGVGFKPDILD--MDVMEKVLEVSSEDAVNMA 283
N G P G+G + M ++ + +AV M+
Sbjct: 183 FNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITRNFAMAKLDGAFRGTDREAVEMS 362
Query: 284 RTLALKEGLMVGISSGANTVAALRLASLPENKGKLIVTVHPSFGERYLS 332
R L +GL +G SS N V A+R+A G IVT+ G R+LS
Sbjct: 363 RFLLKNDGLFLGSSSAMNCVGAVRVAQ-AIGTGHTIVTILCDSGMRHLS 506
>BI469719
Length = 451
Score = 95.1 bits (235), Expect = 4e-20
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +2
Query: 226 PNVKIYGVEPSESNVLNGGKPGPHQITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMART 285
P +++ VEP ES VL+GGKPGPH+I G G GF P +L+++++++V+++SS++A+ A+
Sbjct: 197 PFMQLICVEPVESPVLSGGKPGPHKIQGIGAGFIPGVLEVNLLDEVIQISSDEAIETAKL 376
Query: 286 LALKEGLMVGISSGANTVAALRLA 309
LALKEGL VGISSGA AA ++A
Sbjct: 377 LALKEGLFVGISSGAAAAAAFQIA 448
>BM309180 similar to GP|4996618|dbj| cysteine synthase {Arabidopsis
thaliana}, partial (20%)
Length = 428
Score = 84.7 bits (208), Expect = 6e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +2
Query: 33 IKKHVSQLIGRTPLVYLNKVTEGCGAYIAVKQEMMQPTASIKDRPALAMMEDAEKKNLIT 92
IK+ V++LIG TP+VYLNKV EGC A IA K E M+P +S+KDR AL+M++DAE K LIT
Sbjct: 11 IKQDVTELIGNTPMVYLNKVVEGCVARIAAKLESMEPCSSVKDRLALSMIKDAEDKGLIT 190
Query: 93 PGK 95
PGK
Sbjct: 191PGK 199
>AW133089
Length = 241
Score = 81.6 bits (200), Expect = 5e-16
Identities = 38/76 (50%), Positives = 56/76 (73%)
Frame = +2
Query: 95 KTILIEPTSGNMGISLAFMAAMKGYKMVLTMPSYTSLERRVCMRAFGAELILTDPTKGMG 154
KT+L+E TSGN GI AF+A ++GY +TMPSY LER + +RAFGA + LTD +G+
Sbjct: 14 KTVLVEYTSGNTGI**AFIATLRGYITHVTMPSYVRLEREIILRAFGAXVYLTDTAQGID 193
Query: 155 GTVKKAYDLLESTPNA 170
G ++KA +L+ +TP++
Sbjct: 194 GVIQKAQELITTTPDS 241
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.315 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,379,551
Number of Sequences: 63676
Number of extensions: 125345
Number of successful extensions: 471
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of query: 352
length of database: 12,639,632
effective HSP length: 98
effective length of query: 254
effective length of database: 6,399,384
effective search space: 1625443536
effective search space used: 1625443536
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC139601.2