BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139600.8 + phase: 0
(318 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC229093 homologue to PIR|T51621|T51621 myb-like protein [import... 368 e-102
TC209392 homologue to UP|Q8S3Y1 (Q8S3Y1) Typical P-type R2R3 Myb... 257 4e-69
TC229681 UP|Q9S7E3 (Q9S7E3) GmMYB29A1 protein, complete 189 2e-48
TC218769 UP|Q9XIU8 (Q9XIU8) GmMYB29A2 protein, complete 188 2e-48
TC229682 UP|Q9XIU9 (Q9XIU9) GmMYB29A2 protein, complete 187 5e-48
BF425254 homologue to PIR|S26605|S26 myb-related protein 1 - gar... 186 1e-47
TC218770 UP|Q9XIU5 (Q9XIU5) GmMYB29B2 protein, complete 184 6e-47
TC232084 UP|Q84PP2 (Q84PP2) Transcription factor MYB101 (Fragmen... 182 2e-46
TC203404 GmMYB16 175 2e-44
TC222952 homologue to UP|Q40173 (Q40173) Myb-related transcripti... 172 1e-43
TC233521 similar to UP|O04140 (O04140) Myb protein, partial (44%) 172 2e-43
TC207828 homologue to UP|Q6SL45 (Q6SL45) MYB6, partial (52%) 169 1e-42
TC223540 homologue to PIR|T00737|T00737 myb-related protein F22O... 169 1e-42
BE352650 168 3e-42
TC217107 homologue to UP|Q7X9I1 (Q7X9I1) MYB transcription facto... 166 2e-41
BE352658 165 2e-41
TC211227 similar to UP|Q8W1R8 (Q8W1R8) Blind, partial (40%) 165 2e-41
TC213651 homologue to UP|O49746 (O49746) R2R3-MYB transcription ... 165 3e-41
TC235025 similar to UP|Q6R077 (Q6R077) MYB transcription factor,... 162 1e-40
TC227045 homologue to UP|Q43525 (Q43525) Transcription factor, p... 162 2e-40
>TC229093 homologue to PIR|T51621|T51621 myb-like protein [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(44%)
Length = 964
Score = 368 bits (944), Expect = e-102
Identities = 205/274 (74%), Positives = 220/274 (79%), Gaps = 18/274 (6%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M RPPCCDK GVKKGPWTPEEDIILVSYIQEHGPGNWKAVP NTGL RCSKSCRLRWTNY
Sbjct: 153 MGRPPCCDK-GVKKGPWTPEEDIILVSYIQEHGPGNWKAVPANTGLSRCSKSCRLRWTNY 329
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL-KKL 119
LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL KKL
Sbjct: 330 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLNKKL 509
Query: 120 ETSTSSESCL--GHDEF---SVSQPIARGQWERRLQTDIHMAKKALSEALQPEK-STSSS 173
E + S L GH+ SVSQP++RGQWERRLQTDIHMAKKALSEAL P K S+SSS
Sbjct: 510 EAGSDQGSLLGGGHNNIGFSSVSQPMSRGQWERRLQTDIHMAKKALSEALSPNKASSSSS 689
Query: 174 NLMLPLESNFSSESSFC----STKP-TTQSLSYASSADNIARLLKGWMKNKPKEGSNGNN 228
L+ SN S+E+S + KP TTQS+ YASSADNIARLLKGWMKN PK S +
Sbjct: 690 TLLAESNSNLSNENSTFYNSNTNKPTTTQSMCYASSADNIARLLKGWMKNTPKSASCAAS 869
Query: 229 TNVTQNYETSASSEGM--EKGST----SVELSET 256
VTQN + +SSEG+ KGST +VELSET
Sbjct: 870 A-VTQN--SCSSSEGITTTKGSTTSTSTVELSET 962
>TC209392 homologue to UP|Q8S3Y1 (Q8S3Y1) Typical P-type R2R3 Myb protein
(Fragment), partial (59%)
Length = 866
Score = 257 bits (657), Expect = 4e-69
Identities = 120/148 (81%), Positives = 129/148 (87%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M RPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNW+AVP TGL RCSKSCRLRWTNY
Sbjct: 429 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPAKTGLSRCSKSCRLRWTNY 608
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRPGIKRGNFT+QEEKMIIHLQ LLGNRWAAIA+YLPQRTDNDIKNYWNT+L+KKLKK++
Sbjct: 609 LRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLRKKLKKMQ 788
Query: 121 TSTSSESCLGHDEFSVSQPIARGQWERR 148
S + FS S+ I RGQWERR
Sbjct: 789 VGCEGGSF--GEGFSASRQIPRGQWERR 866
>TC229681 UP|Q9S7E3 (Q9S7E3) GmMYB29A1 protein, complete
Length = 795
Score = 189 bits (479), Expect = 2e-48
Identities = 84/122 (68%), Positives = 102/122 (82%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR PCC+K G+KKGPWTPEED IL+SYIQ+HG GNW+A+P GLLRC KSCRLRW NY
Sbjct: 1 MVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 180
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRP IKRGNF+ +EE++II + LLGNRW+AIAA LP RTDN+IKN W+T+LKK+L +
Sbjct: 181 LRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLMNSD 360
Query: 121 TS 122
T+
Sbjct: 361 TN 366
>TC218769 UP|Q9XIU8 (Q9XIU8) GmMYB29A2 protein, complete
Length = 828
Score = 188 bits (478), Expect = 2e-48
Identities = 113/293 (38%), Positives = 154/293 (51%), Gaps = 14/293 (4%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR PCC+K G+KKGPW PEED IL SYI +HG GNW+A+P GLLRC KSCRLRW NY
Sbjct: 1 MVRAPCCEKMGLKKGPWAPEEDQILTSYIDKHGHGNWRALPKQAGLLRCGKSCRLRWINY 180
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRP IKRGNFT +EE+ II L +LGNRW+AIAA LP RTDN+IKN W+T LKK+L K +
Sbjct: 181 LRPDIKRGNFTIEEEETIIKLHDMLGNRWSAIAAKLPGRTDNEIKNVWHTNLKKRLLKSD 360
Query: 121 TSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSSNLML--- 177
S S S +K+A+ + E+S S+S+++
Sbjct: 361 QSKSKPS----------------------------SKRAIKPKI--ERSDSNSSIITQSE 450
Query: 178 PLESNFSSESSFCSTKPTTQSLSYASSADNIARLLKGWMKNKPK-----------EGSNG 226
P NF + S+ TT S ++S ++ +K + E +
Sbjct: 451 PDNFNFREMDTITSSACTTSSSDFSSVTVGDSKNIKSEDTESTETMPVIDESFWSEAAID 630
Query: 227 NNTNVTQNYETSASSEGMEKGSTSVELSETFESLFGYESFDSSNSDSTTLFQD 279
+ T + ++ S M ETF+ G+ ++DS+ D + D
Sbjct: 631 DETPTMSSSQSLTISNEMRLQYPFANYEETFQQ--GHHAYDSNFDDGMDFWYD 783
>TC229682 UP|Q9XIU9 (Q9XIU9) GmMYB29A2 protein, complete
Length = 1249
Score = 187 bits (475), Expect = 5e-48
Identities = 94/195 (48%), Positives = 125/195 (63%), Gaps = 7/195 (3%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR PCC+K G+KKGPWTPEED IL+SYIQ+HG GNW+A+P GLLRC KSCRLRW NY
Sbjct: 84 MVRAPCCEKMGLKKGPWTPEEDQILMSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 263
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL---- 116
LRP IKRGNF+ +EE++II + LLGNRW+AIAA LP RTDN+IKN W+T+LKK+L
Sbjct: 264 LRPDIKRGNFSSEEEEIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLLNSD 443
Query: 117 --KKLETSTSSESCLGHDEFSVSQPIARGQWERRLQ-TDIHMAKKALSEALQPEKSTSSS 173
K++ S + +P + + K + ++ E S
Sbjct: 444 IQKRVSKPRIKRSDSNSSTLTQLEPTSSACTTSLSDFSSFSEGTKNMDNMIKSEDIESVE 623
Query: 174 NLMLPLESNFSSESS 188
+M P++ +F SE++
Sbjct: 624 TIMPPIDESFWSEAT 668
>BF425254 homologue to PIR|S26605|S26 myb-related protein 1 - garden petunia,
partial (29%)
Length = 375
Score = 186 bits (472), Expect = 1e-47
Identities = 81/117 (69%), Positives = 97/117 (82%)
Frame = +3
Query: 3 RPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLR 62
R PCCDK G+KKGPWTPEED L++YI+EHG G+W+A+P GL RC KSCRLRWTNYLR
Sbjct: 3 RSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLR 182
Query: 63 PGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
P IKRG F QEE+ II L ALLGNRW++I+ +LP+RTDN+IKNYWNT+LKK L K+
Sbjct: 183 PDIKRGKFXMQEEQTIIQLHALLGNRWSSISTHLPKRTDNEIKNYWNTHLKKXLNKM 353
>TC218770 UP|Q9XIU5 (Q9XIU5) GmMYB29B2 protein, complete
Length = 1316
Score = 184 bits (466), Expect = 6e-47
Identities = 85/125 (68%), Positives = 98/125 (78%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
MVR PCC+K G+KKGPW EED IL SYIQ+HG GNW+A+P GLLRC KSCRLRW NY
Sbjct: 112 MVRAPCCEKMGLKKGPWATEEDQILTSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINY 291
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLE 120
LRP IKRGNFT +EE+ II L +LGNRW+AIAA LP RTDN+IKN W+T LKK+L K +
Sbjct: 292 LRPDIKRGNFTIEEEETIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTNLKKRLLKSD 471
Query: 121 TSTSS 125
S S
Sbjct: 472 QSKPS 486
>TC232084 UP|Q84PP2 (Q84PP2) Transcription factor MYB101 (Fragment), complete
Length = 1383
Score = 182 bits (461), Expect = 2e-46
Identities = 79/119 (66%), Positives = 101/119 (84%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PC D+ G+KKGPWTPEED ILV YIQ+HG G+W+A+P + L RC KSCRLRWTNY
Sbjct: 53 MGRTPCSDENGLKKGPWTPEEDRILVDYIQKHGHGSWRALPKHARLNRCGKSCRLRWTNY 232
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
LRP IKRG F+++EE++II+L A+LGN+W+AIA +LP RTDN+IKN+WNT+LKKKL ++
Sbjct: 233 LRPDIKRGKFSEEEEQLIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQM 409
>TC203404 GmMYB16
Length = 1138
Score = 175 bits (444), Expect = 2e-44
Identities = 76/117 (64%), Positives = 89/117 (75%)
Frame = +1
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC K G+ KGPWTP+ED +L YIQ HG G WK++P GLLRC KSCRLRW NY
Sbjct: 106 MGRAPCCSKVGLHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNY 285
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLK 117
LRP IKRGN +E+ +II + +LLGNRW+ IA LP RTDN+IKNYWNT+L KKLK
Sbjct: 286 LRPDIKRGNIAPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLK 456
>TC222952 homologue to UP|Q40173 (Q40173) Myb-related transcription factor,
partial (47%)
Length = 612
Score = 172 bits (437), Expect = 1e-43
Identities = 78/119 (65%), Positives = 95/119 (79%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCCDK G+KKGPWT EED L+S+I +G W+AVP GLLRC KSCRLRWTNY
Sbjct: 125 MGRQPCCDKVGLKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY 304
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
LRP +KRG ++ EEKM+I L A LGNRW+ IA++LP RTDN+IKN+WNT++KKKLKK+
Sbjct: 305 LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKM 481
>TC233521 similar to UP|O04140 (O04140) Myb protein, partial (44%)
Length = 886
Score = 172 bits (436), Expect = 2e-43
Identities = 75/114 (65%), Positives = 92/114 (79%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC++ G+KKGPWT EED ILVS+IQ +G GNW+A+P GLLRC KSCRLRW NY
Sbjct: 20 MTRTPCCERMGLKKGPWTAEEDQILVSHIQRYGHGNWRALPKQAGLLRCGKSCRLRWINY 199
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKK 114
LRP IKRG F+ +EE I+ L +LGNRW+AIAA LP RTDN+IKN+W+T+LK+
Sbjct: 200 LRPDIKRGKFSKEEEDTILKLHGILGNRWSAIAASLPGRTDNEIKNFWHTHLKR 361
>TC207828 homologue to UP|Q6SL45 (Q6SL45) MYB6, partial (52%)
Length = 999
Score = 169 bits (429), Expect = 1e-42
Identities = 73/116 (62%), Positives = 94/116 (80%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC+KE KG WT EED L++YI+ HG G W+++P GLLRC KSCRLRW NY
Sbjct: 41 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINY 220
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
LRP +KRGNFT++E+++II+L +LLGN+W+ IAA LP RTDN+IKNYWNT++K+KL
Sbjct: 221 LRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKL 388
>TC223540 homologue to PIR|T00737|T00737 myb-related protein F22O13.32 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(30%)
Length = 443
Score = 169 bits (429), Expect = 1e-42
Identities = 75/84 (89%), Positives = 79/84 (93%)
Frame = +2
Query: 5 PCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPG 64
PCCDK G+KKGPWTPEEDIILVSYIQEHGPGNW++VPTNTGL RCSKSCRLRWTNYLRPG
Sbjct: 2 PCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPG 181
Query: 65 IKRGNFTDQEEKMIIHLQALLGNR 88
IKRGNFT EE MIIHLQALLGN+
Sbjct: 182IKRGNFTPHEEGMIIHLQALLGNK 253
>BE352650
Length = 528
Score = 168 bits (426), Expect = 3e-42
Identities = 72/120 (60%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 MVRPPCCDKEG-VKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCC++ VKKGPWTPEED L+ YI +HG G+W+ +P GL RC KSCRLRWTN
Sbjct: 103 MGRSPCCEESSSVKKGPWTPEEDEKLIDYISKHGHGSWRTLPKRAGLNRCGKSCRLRWTN 282
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
YLRP IKRG F++ +E++II+ ++LGN+W+ IAA+LP RTDN+IKNYW T+++KKL K+
Sbjct: 283 YLRPDIKRGKFSEDDERIIINFHSVLGNKWSKIAAHLPGRTDNEIKNYWTTHIRKKLLKM 462
>TC217107 homologue to UP|Q7X9I1 (Q7X9I1) MYB transcription factor R2R3 type,
partial (68%)
Length = 1058
Score = 166 bits (419), Expect = 2e-41
Identities = 71/116 (61%), Positives = 91/116 (78%)
Frame = +2
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC+K KG WT EED L+SYI+ HG G W+++P GLLRC KSCRLRW NY
Sbjct: 266 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 445
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
LRP +KRGNFT++E+++II L +LLGN+W+ IA LP RTDN+IKNYWNT++++KL
Sbjct: 446 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 613
>BE352658
Length = 534
Score = 165 bits (418), Expect = 2e-41
Identities = 81/150 (54%), Positives = 102/150 (68%), Gaps = 4/150 (2%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L +YI+++G G NW A+P GL RC KSCRLRW N
Sbjct: 84 MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLN 263
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL--- 116
YLRP IK G FT++E+ +I L +G+RW+ IAA LP RTDNDIKNYWNT LKKKL
Sbjct: 264 YLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGR 443
Query: 117 KKLETSTSSESCLGHDEFSVSQPIARGQWE 146
+K ++ ++ G +E S S ++ E
Sbjct: 444 RKQSNLSAKDTNNGIEENSYSNALSSSALE 533
>TC211227 similar to UP|Q8W1R8 (Q8W1R8) Blind, partial (40%)
Length = 728
Score = 165 bits (418), Expect = 2e-41
Identities = 76/123 (61%), Positives = 90/123 (72%), Gaps = 1/123 (0%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L YI++HG G NW A+P GL RC KSCRLRW N
Sbjct: 45 MGRAPCCDKANVKKGPWSPEEDAKLKDYIEQHGTGGNWIALPQKVGLKRCGKSCRLRWLN 224
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKL 119
YLRP IK G F++ E+K+I L A +G+RW+ IA+ LP RTDNDIKNYWNT LKKK+ +
Sbjct: 225 YLRPNIKHGQFSEAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAM 404
Query: 120 ETS 122
S
Sbjct: 405 NPS 413
>TC213651 homologue to UP|O49746 (O49746) R2R3-MYB transcription factor,
partial (41%)
Length = 522
Score = 165 bits (417), Expect = 3e-41
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPG-NWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCCDK VKKGPW+PEED L SYI++HG G NW A+P GL RC KSCRLRW N
Sbjct: 78 MGRAPCCDKANVKKGPWSPEEDTKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN 257
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
YLRP I+ G F+++E+ +I L +G+RW+ IAA LP RTDNDIKNYWNT LKKKL
Sbjct: 258 YLRPNIRHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKL 428
>TC235025 similar to UP|Q6R077 (Q6R077) MYB transcription factor, partial
(35%)
Length = 434
Score = 162 bits (411), Expect = 1e-40
Identities = 69/112 (61%), Positives = 90/112 (79%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 MVRPPCCDKE-GVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTN 59
M R PCC++ GVKKGPWTPEED L+ YI +HG G+W+ +P GL RC KSCRLRWTN
Sbjct: 97 MGRSPCCEENVGVKKGPWTPEEDEKLIDYISKHGHGSWRTLPKRAGLNRCGKSCRLRWTN 276
Query: 60 YLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTY 111
YL P IKRG F++++E++II+L ++LGN+W+ IA +LP RTDN+IKNYWNT+
Sbjct: 277 YLTPDIKRGKFSEEDERIIINLHSVLGNKWSKIATHLPGRTDNEIKNYWNTH 432
>TC227045 homologue to UP|Q43525 (Q43525) Transcription factor, partial (55%)
Length = 560
Score = 162 bits (409), Expect = 2e-40
Identities = 70/116 (60%), Positives = 90/116 (77%)
Frame = +3
Query: 1 MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNY 60
M R PCC+K KG WT EED L+SYI+ HG G W+++P GLLRC KSCRLRW NY
Sbjct: 15 MGRSPCCEKAHTNKGAWTKEEDHRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 194
Query: 61 LRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKL 116
LRP +KRGNF+ +E+++II L +LLGN+W+ IA LP RTDN+IKNYWNT++++KL
Sbjct: 195 LRPDLKRGNFSLEEDQLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 362
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.128 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,581,164
Number of Sequences: 63676
Number of extensions: 219739
Number of successful extensions: 1442
Number of sequences better than 10.0: 223
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of query: 318
length of database: 12,639,632
effective HSP length: 97
effective length of query: 221
effective length of database: 6,463,060
effective search space: 1428336260
effective search space used: 1428336260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC139600.8