BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138579.3 + phase: 0 /pseudo
(437 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227518 similar to UP|Q93VD3 (Q93VD3) At1g30270/F12P21_6 (CBL-i... 445 e-125
TC207101 similar to UP|O24342 (O24342) Serine/threonine kinase ,... 427 e-120
TC231019 similar to UP|Q9FUK2 (Q9FUK2) CBL-interacting protein k... 416 e-116
TC225868 UP|Q8LK24 (Q8LK24) SOS2-like protein kinase, complete 382 e-106
TC209238 similar to UP|Q8LK24 (Q8LK24) SOS2-like protein kinase,... 284 6e-77
TC228499 homologue to UP|Q8LK24 (Q8LK24) SOS2-like protein kinas... 275 4e-74
TC226147 weakly similar to UP|Q9LZW5 (Q9LZW5) Serine/threonine p... 153 7e-74
CD415664 258 4e-69
TC226149 similar to UP|Q8H2C2 (Q8H2C2) Serine/threonine kinase, ... 257 8e-69
TC228892 UP|Q9XF25 (Q9XF25) SNF-1-like serine/threonine protein ... 256 1e-68
AW133252 similar to GP|9294138|dbj serine/threonine kinase {Arab... 253 1e-67
TC220145 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ... 112 7e-57
TC219984 similar to PIR|T09903|T09903 serine/threonine-specific ... 198 3e-55
TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase ... 212 3e-55
TC227331 similar to UP|Q43465 (Q43465) Protein kinase 2, partial... 209 2e-54
TC208868 UP|Q39868 (Q39868) Protein kinase , complete 207 7e-54
TC218712 similar to UP|Q40264 (Q40264) Protein kinase , partial ... 206 2e-53
TC225977 similar to UP|Q9M6N2 (Q9M6N2) Abscisic acid-activated p... 206 2e-53
TC216978 homologue to UP|Q8RXH5 (Q8RXH5) Osmotic stress-activate... 204 8e-53
TC207721 UP|Q43466 (Q43466) Protein kinase 3 , complete 201 5e-52
>TC227518 similar to UP|Q93VD3 (Q93VD3) At1g30270/F12P21_6 (CBL-interacting
protein kinase 23), partial (86%)
Length = 1492
Score = 445 bits (1144), Expect = e-125
Identities = 227/420 (54%), Positives = 296/420 (70%), Gaps = 7/420 (1%)
Frame = +1
Query: 16 RLGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLL 75
R+GKYELG+TLGEGNF KVK AR + + A+KIL+K K++ QIKREIST+KL+
Sbjct: 25 RVGKYELGRTLGEGNFAKVKFARHVETRENVAIKILDKEKLLKHKMIAQIKREISTMKLI 204
Query: 76 KHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCH 135
+HPNV+R+YEV+ASKTKIY+VLE+V GGELFDKI+ G+L E RK FQQLI V YCH
Sbjct: 205 RHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCH 384
Query: 136 NKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANR 195
++GVFHRDLK EN+L+DA G +K++DF LSALPQ R DGLLHTTCG+PNYVAPE++ N+
Sbjct: 385 SRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNK 564
Query: 196 GYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKI 255
GYDGAK+D+WSCGVIL+V++ GYLPF++ NL+ LY+KIFKA+ P W S A+ +I KI
Sbjct: 565 GYDGAKADLWSCGVILFVLMAGYLPFEETNLSALYKKIFKAEFTCPPWFSSSAKKLINKI 744
Query: 256 LDPNPKTRVTMDMIKEDEWFKEGYNPANLEDE----EEEEDVFID--DEAFSIHEVSLDG 309
LDPNP TR+T + E++WFK+GY P E ++ + +F + D + E +G
Sbjct: 745 LDPNPATRITFAEVIENDWFKKGYKPPVFEQANISLDDVDSIFSNSTDSQNLVVERREEG 924
Query: 310 DQSPKSPALINAFQLIGMSSCLDLSGFFE-QEDVSERKIRFTSNHSPKDLTEKIEDIVIE 368
+P +P +NAF+LI S L+LS FE Q + +R+ RFTS S ++ KIE
Sbjct: 925 PMAPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEKAAGP 1104
Query: 369 MGFKVHKKNGKLKVIQEDKAHKSLDSLSVAAEVFEVGPSLYVVELRKSYGDASVYRQVCI 428
+GF V K N KLK+ E K LSVA E+ EV PSLY+VELRKS GD + +V I
Sbjct: 1105LGFDVKKNNCKLKIEGEKTGRKG--HLSVATEILEVAPSLYMVELRKSEGDTLEFHKVPI 1278
>TC207101 similar to UP|O24342 (O24342) Serine/threonine kinase , partial
(98%)
Length = 1719
Score = 427 bits (1097), Expect = e-120
Identities = 212/409 (51%), Positives = 293/409 (70%), Gaps = 5/409 (1%)
Frame = +1
Query: 16 RLGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLL 75
R+GKYE+G+T+GEG F KVK AR+++ G+ A+KIL+K K++ +QI+RE++T+KL+
Sbjct: 208 RVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREVATMKLI 387
Query: 76 KHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCH 135
KHPNVVRLYEV+ SKTKIY+VLE+V GGELFDKI + G+++E R+ FQQLI+ V YCH
Sbjct: 388 KHPNVVRLYEVMGSKTKIYIVLEFVTGGELFDKIVNHGRMSENEARRYFQQLINAVDYCH 567
Query: 136 NKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANR 195
++GV+HRDLK EN+L+D GN+K++DF LSAL Q R DGLLHTTCG+PNYVAPE+L +R
Sbjct: 568 SRGVYHRDLKPENLLLDTYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDR 747
Query: 196 GYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKI 255
GYDGA +D+WSCGVIL+V++ GYLPFDD NL LY+KI A+ P WLS A+ +I +I
Sbjct: 748 GYDGATADLWSCGVILFVLVAGYLPFDDPNLMNLYKKISAAEFTCPPWLSFTARKLITRI 927
Query: 256 LDPNPKTRVTMDMIKEDEWFKEGYNPANLEDE-----EEEEDVFIDDEAFSIHEVSLDGD 310
LDP+P TR+T+ I +DEWFK+ Y P E+ ++ E VF D E H V+ +
Sbjct: 928 LDPDPTTRITIPEILDDEWFKKEYKPPIFEENGETNLDDVEAVFKDSEE---HHVT---E 1089
Query: 311 QSPKSPALINAFQLIGMSSCLDLSGFFEQEDVSERKIRFTSNHSPKDLTEKIEDIVIEMG 370
+ + P +NAF+LI MS L+L F+ E +R+ RFTS ++ KIE+ +G
Sbjct: 1090KKEEQPTAMNAFELISMSKGLNLENLFDTEQGFKRETRFTSKSPADEIINKIEEAAKPLG 1269
Query: 371 FKVHKKNGKLKVIQEDKAHKSLDSLSVAAEVFEVGPSLYVVELRKSYGD 419
F V KKN K+++ K +L+VA E+F+V PSL++VE+RK+ GD
Sbjct: 1270FDVQKKNYKMRLANVKAGRKG--NLNVATEIFQVAPSLHMVEVRKAKGD 1410
>TC231019 similar to UP|Q9FUK2 (Q9FUK2) CBL-interacting protein kinase 1,
partial (55%)
Length = 903
Score = 416 bits (1068), Expect = e-116
Identities = 207/280 (73%), Positives = 235/280 (83%), Gaps = 1/280 (0%)
Frame = +2
Query: 154 KGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYV 213
KGNIKITDF LSALPQH R DGLLHTTCGSPNYVAPE+LAN+GYDGA SD WSCGVILYV
Sbjct: 5 KGNIKITDFGLSALPQHLREDGLLHTTCGSPNYVAPEVLANKGYDGATSDTWSCGVILYV 184
Query: 214 ILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKILDPNPKTRVTMDMIKEDE 273
ILTG+LPFDDRNL VLYQKIFK DVQIP+WL+PGA+N+I++ILDPNP+TR+TM IKED
Sbjct: 185 ILTGHLPFDDRNLVVLYQKIFKGDVQIPKWLTPGARNMIRRILDPNPETRITMAGIKEDP 364
Query: 274 WFKEGYNPANLEDEEEEEDVFIDDEAFSIHEVSLDGDQ-SPKSPALINAFQLIGMSSCLD 332
WFK+GY P N ED EDV++D EAFSIHE + +Q + SP+LINAFQLIGMSSCLD
Sbjct: 365 WFKKGYIPVNPED----EDVYVDQEAFSIHEQPNEAEQRNSGSPSLINAFQLIGMSSCLD 532
Query: 333 LSGFFEQEDVSERKIRFTSNHSPKDLTEKIEDIVIEMGFKVHKKNGKLKVIQEDKAHKSL 392
LSGFFE+EDVSERKIRF SN S KDL E+IED EM F+V KKNGKLKVI+E+K HK+L
Sbjct: 533 LSGFFEKEDVSERKIRFASNLSVKDLIERIEDTATEMEFRVEKKNGKLKVIRENKVHKTL 712
Query: 393 DSLSVAAEVFEVGPSLYVVELRKSYGDASVYRQVCILLLS 432
LSV EVF + SLYVVELRKSYGD SVY+Q+C LL+
Sbjct: 713 GCLSVVVEVFGISSSLYVVELRKSYGDGSVYKQLCNKLLN 832
>TC225868 UP|Q8LK24 (Q8LK24) SOS2-like protein kinase, complete
Length = 2261
Score = 382 bits (980), Expect = e-106
Identities = 192/411 (46%), Positives = 271/411 (65%), Gaps = 1/411 (0%)
Frame = +2
Query: 18 GKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKH 77
GKYELG+ LG G F KV AR G+ A+K++ K K+V + +QIKREIS + ++KH
Sbjct: 482 GKYELGRLLGHGTFAKVYHARHLKTGKSVAMKVVGKEKVVKVGMMEQIKREISAMNMVKH 661
Query: 78 PNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNK 137
PN+V+L+EV+ASK+KIY+ +E V GGELF+KI+ +G+L E R FQQLI V +CH++
Sbjct: 662 PNIVQLHEVMASKSKIYIAMELVRGGELFNKIA-RGRLREEMARLYFQQLISAVDFCHSR 838
Query: 138 GVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGY 197
GV+HRDLK EN+L+D GN+K+TDF LS +H R DGLLHTTCG+P YVAPE++ RGY
Sbjct: 839 GVYHRDLKPENLLLDDDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTPAYVAPEVIGKRGY 1018
Query: 198 DGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKILD 257
DGAK+DIWSCGVILYV+L G+LPF D NL LY+KI++ D + P W S A+ +I K+LD
Sbjct: 1019DGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLD 1198
Query: 258 PNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDVFID-DEAFSIHEVSLDGDQSPKSP 316
PNP TR+T+ I + WFK+ P NL ++ EE +D +E HE +
Sbjct: 1199PNPNTRITISKIMDSSWFKKPV-PKNLMGKKREE---LDLEEKIKQHEQEVS-------- 1342
Query: 317 ALINAFQLIGMSSCLDLSGFFEQEDVSERKIRFTSNHSPKDLTEKIEDIVIEMGFKVHKK 376
+NAF +I +S DLS FE++ E+++RF + + ++ED+ + F V K
Sbjct: 1343TTMNAFHIISLSEGFDLSPLFEEKKREEKELRFATTRPASSVISRLEDLAKAVKFDVKKS 1522
Query: 377 NGKLKVIQEDKAHKSLDSLSVAAEVFEVGPSLYVVELRKSYGDASVYRQVC 427
K+++ ++K K L++AA+++ V PS VVE++K GD Y Q C
Sbjct: 1523ETKVRLQGQEKGRKG--KLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFC 1669
>TC209238 similar to UP|Q8LK24 (Q8LK24) SOS2-like protein kinase, partial
(53%)
Length = 926
Score = 284 bits (726), Expect = 6e-77
Identities = 128/228 (56%), Positives = 176/228 (77%)
Frame = +2
Query: 18 GKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKH 77
GKYELG+ LG G F KV AR+ + GQ A+K++ K K++ + +Q+KREIS +K++KH
Sbjct: 239 GKYELGRVLGHGTFAKVYHARNLNTGQHVAMKVVGKEKVIKVGMMEQVKREISVMKMVKH 418
Query: 78 PNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNK 137
N+V L+EV+ASK+KIY+ +E V GGELF+K+S KG+L E R FQQLI V +CH++
Sbjct: 419 QNIVELHEVMASKSKIYIAMELVRGGELFNKVS-KGRLKEDVARLYFQQLISAVDFCHSR 595
Query: 138 GVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGY 197
GV+HRDLK EN+L+D GN+K++DF L+A +H + DGLLHTTCG+P YV+PE++A +GY
Sbjct: 596 GVYHRDLKPENLLLDEHGNLKVSDFGLTAFSEHLKEDGLLHTTCGTPAYVSPEVIAKKGY 775
Query: 198 DGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLS 245
DGAK+DIWSCGVILYV+L G+LPF D NL +Y+KI++ D + P W S
Sbjct: 776 DGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFS 919
>TC228499 homologue to UP|Q8LK24 (Q8LK24) SOS2-like protein kinase, partial
(72%)
Length = 1411
Score = 275 bits (702), Expect = 4e-74
Identities = 136/303 (44%), Positives = 190/303 (61%)
Frame = +1
Query: 125 QQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSP 184
QQLI V +CH++GVFHRDLK EN+L+D GN+K+TDF LS +H R DGLLHTTCG+P
Sbjct: 1 QQLISAVDFCHSRGVFHRDLKPENLLLDDDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTP 180
Query: 185 NYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWL 244
YVAPE++ RGYDGAK+DIWSCGVILYV+L G+LPF D NL LY+KI++ D + P W
Sbjct: 181 AYVAPEVIGKRGYDGAKADIWSCGVILYVLLAGFLPFQDENLVALYKKIYRGDFKCPPWF 360
Query: 245 SPGAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDVFIDDEAFSIHE 304
S A+ +I K+LDPNP TR+T+ I + WFK+ P NL ++ EE + E
Sbjct: 361 SSEARRLITKLLDPNPNTRITISKIMDSSWFKKPV-PKNLVGKKREELNLEEKIKHQEQE 537
Query: 305 VSLDGDQSPKSPALINAFQLIGMSSCLDLSGFFEQEDVSERKIRFTSNHSPKDLTEKIED 364
VS +NAF +I +S DLS FE++ E+++RF + + ++ED
Sbjct: 538 VS----------TTMNAFHIISLSEGFDLSPLFEEKKREEKELRFATTRPASSVISRLED 687
Query: 365 IVIEMGFKVHKKNGKLKVIQEDKAHKSLDSLSVAAEVFEVGPSLYVVELRKSYGDASVYR 424
+ + F V K K+++ ++ K L++AA+++ V PS VVE++K GD Y
Sbjct: 688 LAKAVKFDVKKSETKVRLQGQENGRKG--KLAIAADLYAVTPSFLVVEVKKDNGDTLEYN 861
Query: 425 QVC 427
Q C
Sbjct: 862 QFC 870
>TC226147 weakly similar to UP|Q9LZW5 (Q9LZW5) Serine/threonine protein
kinase ATPK10 , partial (55%)
Length = 1439
Score = 153 bits (386), Expect(2) = 7e-74
Identities = 72/177 (40%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Frame = +1
Query: 152 DAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVIL 211
D ++K++DF LSALP R+DG+L T CG+P YVAPE+L +GYDG+K+DIWSCGVIL
Sbjct: 763 DENEDLKVSDFGLSALPDQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVIL 942
Query: 212 YVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKILDPNPKTRVTMDMIKE 271
+ +L+GYLPF N+ +Y K F+AD P W+SPGA+N+I +L +P+ R ++ I +
Sbjct: 943 FALLSGYLPFQGENVMRIYSKSFRADYAFPEWISPGAKNLISNLLVVDPQKRYSIPDIMK 1122
Query: 272 DEWFKEGYN---PANLEDEEEEEDVFIDDEAFSIHEVSLDGDQSPKSPALINAFQLI 325
D WF+ G+ ++++ E+++ + SI + L D P +++++ L+
Sbjct: 1123DPWFQIGFMRPIAFSMKESAVEDNIDFSGDDVSIITIRLGLDLLPM*CNILSSYFLL 1293
Score = 142 bits (359), Expect(2) = 7e-74
Identities = 68/137 (49%), Positives = 98/137 (70%)
Frame = +3
Query: 15 VRLGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKL 74
+ KYE+GK LG+GNF KV R+ + A+K+++K ++ QIKRE+S ++L
Sbjct: 354 ILFNKYEIGKLLGQGNFAKVYHGRNLSTNESVAIKVIKKERLQKERLVKQIKREVSVMRL 533
Query: 75 LKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYC 134
++HP++V L EV+A+K KI+MV+EYV GGELF K+ +KGK+ E RK FQQLI V +C
Sbjct: 534 VRHPHIVELKEVMANKAKIFMVVEYVKGGELFAKV-AKGKMKEDVARKYFQQLISAVDFC 710
Query: 135 HNKGVFHRDLKLENVLV 151
H++GV HRDLK EN+L+
Sbjct: 711 HSRGVTHRDLKPENLLL 761
>CD415664
Length = 619
Score = 258 bits (659), Expect = 4e-69
Identities = 129/191 (67%), Positives = 141/191 (73%)
Frame = -2
Query: 114 KLTEAHGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRA 173
KLTE RK+FQQLIDGVSYCH KGVFHRDLK
Sbjct: 618 KLTEGECRKLFQQLIDGVSYCHTKGVFHRDLK---------------------------E 520
Query: 174 DGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKI 233
DGLLHTTCGSPNYVAPE+LAN+GYDGA SD WSCGVILYV LTGYLPFDDRNL VLYQKI
Sbjct: 519 DGLLHTTCGSPNYVAPEVLANKGYDGATSDTWSCGVILYVSLTGYLPFDDRNLVVLYQKI 340
Query: 234 FKADVQIPRWLSPGAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDV 293
FK D QIP+WLSPGA N+I++ILDPNP+TR+TM IKED WFK+GY PAN ED EDV
Sbjct: 339 FKGDAQIPKWLSPGAPNMIRRILDPNPETRITMAGIKEDPWFKKGYIPANPED----EDV 172
Query: 294 FIDDEAFSIHE 304
+D+EAFS HE
Sbjct: 171 HVDNEAFSSHE 139
>TC226149 similar to UP|Q8H2C2 (Q8H2C2) Serine/threonine kinase, partial
(49%)
Length = 676
Score = 257 bits (656), Expect = 8e-69
Identities = 119/226 (52%), Positives = 168/226 (73%)
Frame = +1
Query: 23 GKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHPNVVR 82
G+ LG+GNF KV AR+ + + A+K+++K K+ QIKRE+S ++L++HP++V
Sbjct: 1 GRVLGQGNFAKVYHARNLNTNESVAIKVIKKEKLKKERLVKQIKREVSVMRLVRHPHIVE 180
Query: 83 LYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKGVFHR 142
L EV+A+K KI++V+EYV GGELF K++ KGKLTE RK FQQLI V +CH++GV HR
Sbjct: 181 LKEVMATKGKIFLVMEYVKGGELFAKVN-KGKLTEDLARKYFQQLISAVDFCHSRGVTHR 357
Query: 143 DLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKS 202
DLK EN+L+D ++K++DF LS LP+ RADG+L T CG+P YVAPE+L +GYDG+K+
Sbjct: 358 DLKPENLLLDQNEDLKVSDFGLSTLPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKA 537
Query: 203 DIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGA 248
DIWSCGVIL+ +L GYLPF N+ +Y+K F+A+ + P W+S A
Sbjct: 538 DIWSCGVILFALLCGYLPFQGENVMRIYRKAFRAEYEFPEWISTQA 675
>TC228892 UP|Q9XF25 (Q9XF25) SNF-1-like serine/threonine protein kinase,
complete
Length = 1931
Score = 256 bits (654), Expect = 1e-68
Identities = 127/260 (48%), Positives = 176/260 (66%)
Frame = +1
Query: 17 LGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLK 76
L Y+LGKTLG G+FGKVK+A G A+KIL ++KI ++ ++++REI L+L
Sbjct: 127 LRNYKLGKTLGIGSFGKVKIAEHVRTGHKVAIKILNRHKIKNMEMEEKVRREIKILRLFM 306
Query: 77 HPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHN 136
H +++RLYEV+ + T IY+V+EYV GELFD I KG+L E R FQQ+I GV YCH
Sbjct: 307 HHHIIRLYEVVETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARHFFQQIISGVEYCHR 486
Query: 137 KGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRG 196
V HRDLK EN+L+D+K NIKI DF LS + R L T+CGSPNY APE+++ +
Sbjct: 487 NMVVHRDLKPENLLLDSKFNIKIADFGLSNI---MRDGHFLKTSCGSPNYAAPEVISGKL 657
Query: 197 YDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKIL 256
Y G + D+WSCGVILY +L G LPFDD N+ L++KI +P LSPGA+++I ++L
Sbjct: 658 YAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRML 837
Query: 257 DPNPKTRVTMDMIKEDEWFK 276
+P R+T+ I++ WF+
Sbjct: 838 VVDPMKRMTIPEIRQHPWFQ 897
>AW133252 similar to GP|9294138|dbj serine/threonine kinase {Arabidopsis
thaliana}, partial (27%)
Length = 403
Score = 253 bits (646), Expect = 1e-67
Identities = 120/132 (90%), Positives = 127/132 (95%)
Frame = +1
Query: 126 QLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPN 185
+LID VS+CHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQH R DGLLHTTCGSPN
Sbjct: 4 RLIDCVSFCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHFREDGLLHTTCGSPN 183
Query: 186 YVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLS 245
YVAPEILAN+GYDGA SDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFK +VQIPRWLS
Sbjct: 184 YVAPEILANKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGEVQIPRWLS 363
Query: 246 PGAQNIIKKILD 257
PG+QNIIK++LD
Sbjct: 364 PGSQNIIKRMLD 399
>TC220145 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein kinase-like
protein (CBL-interacting protein kinase 5), partial
(59%)
Length = 1094
Score = 112 bits (279), Expect(3) = 7e-57
Identities = 76/222 (34%), Positives = 108/222 (48%), Gaps = 9/222 (4%)
Frame = +3
Query: 215 LTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKILDPNPKTRVTMDMIKEDEW 274
L G+LPF NL +Y K+ +A+ + P W SP ++ +I KIL +P R T+ I W
Sbjct: 291 LAGFLPFQHENLMTMYNKVLRAEFEFPPWFSPDSKRLISKILVADPAKRTTISAITRVPW 470
Query: 275 FKEGYNP------ANLEDEEEEEDVFIDDEAFSIHEVSLDGDQSPKSPALINAFQLI-GM 327
F++G++ LE +E+ V + +E + + K P NAF+ I M
Sbjct: 471 FRKGFSSLSAPDLCQLEKQEDAVTVTVTEE-----------ENNSKVPKFFNAFEFISSM 617
Query: 328 SSCLDLSGFFEQEDVSERKIR--FTSNHSPKDLTEKIEDIVIEMGFKVHKKNGKLKVIQE 385
SS DLSG FE S+RK FTS S + KI + F+V + K+ +
Sbjct: 618 SSGFDLSGLFE----SKRKTATVFTSKCSAAAIVAKIAAAARGLSFRVAEVK-DFKIRLQ 782
Query: 386 DKAHKSLDSLSVAAEVFEVGPSLYVVELRKSYGDASVYRQVC 427
A L+V AEVFEV P + VVE KS GD Y + C
Sbjct: 783 GAAEGRKGRLAVTAEVFEVAPEVAVVEFSKSAGDTLEYAKFC 908
Score = 97.4 bits (241), Expect(3) = 7e-57
Identities = 41/59 (69%), Positives = 51/59 (85%)
Frame = +2
Query: 156 NIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVI 214
N+KI+DF LSALP+ R DGLLHT CG+P YVAPE+L +GYDG+K+DIWSCGV+LYV+
Sbjct: 113 NLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVVLYVL 289
Score = 50.8 bits (120), Expect(3) = 7e-57
Identities = 22/32 (68%), Positives = 26/32 (80%)
Frame = +1
Query: 121 RKMFQQLIDGVSYCHNKGVFHRDLKLENVLVD 152
RK FQQLI V YCH++GV HRDLK EN+L+D
Sbjct: 7 RKYFQQLISAVDYCHSRGVSHRDLKPENLLLD 102
>TC219984 similar to PIR|T09903|T09903 serine/threonine-specific protein
kinase homolog T22A6.230 - Arabidopsis thaliana
{Arabidopsis thaliana;} , partial (53%)
Length = 888
Score = 198 bits (504), Expect(2) = 3e-55
Identities = 107/232 (46%), Positives = 151/232 (64%), Gaps = 6/232 (2%)
Frame = +2
Query: 155 GNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVI 214
GNIKI+DF LSA P+ + +L TTCG+PNYVAPE+L+++GY+GA +D+WSCGVILYV+
Sbjct: 71 GNIKISDFGLSAFPE--QGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVL 244
Query: 215 LTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKILDPNPKTRVTMDMIKEDEW 274
L GYLPFD+ +L LY KI +A+ P W GA+ +I +ILDPNP+TR+T++ I+ DEW
Sbjct: 245 LAGYLPFDELDLTTLYSKIERAEFSCPPWFPVGAKLLIHRILDPNPETRITIEHIRNDEW 424
Query: 275 FKEGYNPANLEDEEEEEDVFIDD--EAF-SIHEVSLDG--DQSPKSPALINAFQLIGMSS 329
F+ Y P +L E EDV +DD AF E+ D D P ++NAF LI +S
Sbjct: 425 FQRSYVPVSL---LEYEDVNLDDVNAAFDDAEELRADQQCDNDDMGPLMLNAFDLIILSQ 595
Query: 330 CLDLSGFFEQ-EDVSERKIRFTSNHSPKDLTEKIEDIVIEMGFKVHKKNGKL 380
L+L+ F++ +D + + RF S K + +E + MGFK H +N K+
Sbjct: 596 GLNLATIFDRGQDSVKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKV 751
Score = 35.4 bits (80), Expect(2) = 3e-55
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +3
Query: 133 YCHNKGVFHRDLKLENVLV 151
YCH+KGV+HRDLK E++L+
Sbjct: 3 YCHSKGVYHRDLKPEDLLL 59
>TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase
(CBL-interacting protein kinase 4), partial (45%)
Length = 674
Score = 212 bits (539), Expect = 3e-55
Identities = 102/197 (51%), Positives = 140/197 (70%), Gaps = 1/197 (0%)
Frame = +2
Query: 17 LGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLK 76
L KY+L + LG GNF KV AR G AVK ++K+K VD +I REI ++ L
Sbjct: 86 LAKYQLTRFLGRGNFAKVYQARSLLDGATVAVKAIDKSKTVDAAMEPRIVREIDAMRRLH 265
Query: 77 H-PNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCH 135
H PN+++++EVLA+KTKIY+++++ GGELF K++ +G+L E R+ F QL+ + +CH
Sbjct: 266 HHPNILKIHEVLATKTKIYLIVDFAGGGELFSKLTRRGRLPEPLARRYFAQLVSALRFCH 445
Query: 136 NKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANR 195
GV HRDLK +N+L+DA GN+K++DF LSALP+H DGLLHT CG+P + APEIL
Sbjct: 446 RHGVAHRDLKPQNLLLDAAGNLKVSDFGLSALPEHLH-DGLLHTACGTPAFTAPEILRRV 622
Query: 196 GYDGAKSDIWSCGVILY 212
GYDG+ +D WSCGVILY
Sbjct: 623 GYDGSXADAWSCGVILY 673
>TC227331 similar to UP|Q43465 (Q43465) Protein kinase 2, partial (88%)
Length = 1334
Score = 209 bits (532), Expect = 2e-54
Identities = 117/283 (41%), Positives = 167/283 (58%), Gaps = 12/283 (4%)
Frame = +2
Query: 19 KYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHP 78
+YE K LG GNFG +LA+D G+ AVK +E+ K +D N ++REI + L+HP
Sbjct: 68 RYEPLKELGAGNFGVARLAKDKKTGELVAVKYIERGKKIDEN----VQREIINHRSLRHP 235
Query: 79 NVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKG 138
N++R EVL + T + +VLEY +GGELF++I + G+ +E R FQQLI GVSYCH+
Sbjct: 236 NIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSME 415
Query: 139 VFHRDLKLENVLVDAKGN--IKITDFNLSALPQHCRADGLLH----TTCGSPNYVAPEIL 192
+ HRDLKLEN L+D + +KI DF S LLH +T G+P Y+APE+L
Sbjct: 416 ICHRDLKLENTLLDGNPSPRLKICDFGYS-------KSALLHSQPKSTVGTPAYIAPEVL 574
Query: 193 ANRGYDGAKSDIWSCGVILYVILTGYLPFDD----RNLAVLYQKIFKADVQIPRW--LSP 246
+ + YDG SD+WSCGV LYV+L G PF+D RN +I IP + +S
Sbjct: 575 SRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGIQYSIPDYVRVSS 754
Query: 247 GAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEE 289
+N++ +I +P R+T+ IK+ WF + +E E +
Sbjct: 755 DCRNLLSRIFVADPAKRITIPEIKQYPWFLKNMPKEIIEAERK 883
>TC208868 UP|Q39868 (Q39868) Protein kinase , complete
Length = 1217
Score = 207 bits (527), Expect = 7e-54
Identities = 114/281 (40%), Positives = 165/281 (58%), Gaps = 12/281 (4%)
Frame = +1
Query: 19 KYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHP 78
+YE K LG GNFG +LA+D + G+ A+K +E+ K +D N ++REI + L+HP
Sbjct: 100 RYETLKELGSGNFGVARLAKDKETGELVAIKYIERGKKIDAN----VQREIVNHRSLRHP 267
Query: 79 NVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKG 138
N++R EV + T + +VLEY GGELF++I + G+L+E R FQQLI GVSYCH+
Sbjct: 268 NIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARCFFQQLISGVSYCHSMQ 447
Query: 139 VFHRDLKLENVLVDAK--GNIKITDFNLSALPQHCRADGLLH----TTCGSPNYVAPEIL 192
+ HRDLKLEN L+D +KI DF S LLH +T G+P Y+APE+L
Sbjct: 448 ICHRDLKLENTLLDGNPAPRLKICDFGFS-------KSALLHSQPKSTVGTPAYIAPEVL 606
Query: 193 ANRGYDGAKSDIWSCGVILYVILTGYLPFDD----RNLAVLYQKIFKADVQIPRW--LSP 246
+ + YDG +D+WSCGV LYV+L G PF+D +N +I IP + +S
Sbjct: 607 SRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKSIGRIMSVQYAIPDYVRVSK 786
Query: 247 GAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDE 287
+++I I NP R+++ IK+ WF++ +E E
Sbjct: 787 ECRHLISCIFVANPAKRISISEIKQHLWFRKNLPREIIEPE 909
>TC218712 similar to UP|Q40264 (Q40264) Protein kinase , partial (95%)
Length = 1223
Score = 206 bits (524), Expect = 2e-53
Identities = 122/340 (35%), Positives = 189/340 (54%), Gaps = 14/340 (4%)
Frame = +2
Query: 19 KYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHP 78
+YE+ K +G GNF KL RD + FAVK +E+ + +D + ++REI + LKHP
Sbjct: 56 RYEILKDIGSGNFAVAKLVRDNYTNELFAVKFIERGQKID----EHVQREIMNHRSLKHP 223
Query: 79 NVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKG 138
N++R EVL + T + +V+EY +GGELF++I + G+ +E R FQQLI GVSYCH+
Sbjct: 224 NIIRFKEVLLTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQ 403
Query: 139 VFHRDLKLENVLVDAK--GNIKITDFNLSALPQHCRADGLLH----TTCGSPNYVAPEIL 192
+ HRDLKLEN L+D +KI DF S +LH +T G+P Y+APE+L
Sbjct: 404 ICHRDLKLENTLLDGSTAPRVKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 562
Query: 193 ANRGYDGAKSDIWSCGVILYVILTGYLPFDD----RNLAVLYQKIFKADVQIPRW--LSP 246
+ YDG +D+WSCGV LYV+L G PF+D RN KI +P + +S
Sbjct: 563 TRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPADPRNFKKTIGKILSVQYSVPDYVRVSM 742
Query: 247 GAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDVFIDDEAFSIHEVS 306
++++ +I +P+ R+T+ IK WF P L + + +++ + ++ EV
Sbjct: 743 ECRHLLSQIFVASPEKRITIPEIKNHPWFLRNL-PMELTEGGSWQMNDVNNPSQNVEEVL 919
Query: 307 LDGDQSPKSPALINAFQLIGM--SSCLDLSGFFEQEDVSE 344
++ KS +N ++ G+ +DL F ED+ +
Sbjct: 920 SIIQEARKS---LNVPKVGGLLTGGSMDLDDFDADEDLED 1030
>TC225977 similar to UP|Q9M6N2 (Q9M6N2) Abscisic acid-activated protein
kinase, partial (95%)
Length = 1512
Score = 206 bits (523), Expect = 2e-53
Identities = 117/282 (41%), Positives = 164/282 (57%), Gaps = 12/282 (4%)
Frame = +1
Query: 19 KYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHP 78
+Y+L + +G GNFG +L +D + AVK +E+ +D N +KREI + L+HP
Sbjct: 280 RYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDEN----VKREIINHRSLRHP 447
Query: 79 NVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKG 138
N+VR EV+ + T + +V+EY +GGELF+KI + G+ TE R FQQLI GVSYCH
Sbjct: 448 NIVRFKEVILTPTHLAIVMEYASGGELFEKICNAGRFTEDEARFFFQQLISGVSYCHAMQ 627
Query: 139 VFHRDLKLENVLVDAK--GNIKITDFNLSALPQHCRADGLLH----TTCGSPNYVAPEIL 192
V HRDLKLEN L+D +KI DF S +LH +T G+P Y+APE+L
Sbjct: 628 VCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 786
Query: 193 ANRGYDGAKSDIWSCGVILYVILTGYLPFDDRN----LAVLYQKIFKADVQIPR--WLSP 246
+ YDG +D+WSCGV LYV+L G PF+D N Q++ IP +SP
Sbjct: 787 LKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRVLSVQYSIPDGVQISP 966
Query: 247 GAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEE 288
+++I +I +P R+TM I EWF + PA+L DE+
Sbjct: 967 ECRHLISRIFVFDPAERITMSEIWNHEWFLKNL-PADLMDEK 1089
>TC216978 homologue to UP|Q8RXH5 (Q8RXH5) Osmotic stress-activated protein
kinase, partial (96%)
Length = 1626
Score = 204 bits (518), Expect = 8e-53
Identities = 115/301 (38%), Positives = 169/301 (55%), Gaps = 12/301 (3%)
Frame = +1
Query: 17 LGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLK 76
+ KYEL K +G GNFG +L R D + A+K +E+ +D N + REI + L+
Sbjct: 355 MDKYELVKDIGSGNFGVARLMRHKDTKELVAMKYIERGHKIDEN----VAREIINHRSLR 522
Query: 77 HPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHN 136
HPN++R EV+ + T + +V+EY GGELF++I S G+ +E R FQQLI GVSYCH+
Sbjct: 523 HPNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHS 702
Query: 137 KGVFHRDLKLENVLVDAK--GNIKITDFNLSALPQHCRADGLLH----TTCGSPNYVAPE 190
+ HRDLKLEN L+D +KI DF S LLH +T G+P Y+APE
Sbjct: 703 MQICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSLLHSRPKSTVGTPAYIAPE 861
Query: 191 ILANRGYDGAKSDIWSCGVILYVILTGYLPFDD----RNLAVLYQKIFKADVQIPRW--L 244
+L+ R YDG +D+WSCGV LYV+L G PF+D +N +I +IP + +
Sbjct: 862 VLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHI 1041
Query: 245 SPGAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDVFIDDEAFSIHE 304
S ++++ +I NP R+T+ IK WF + P L + + ++ FS+
Sbjct: 1042SQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNL-PRELTEVAQAAYYRKENPTFSLQS 1218
Query: 305 V 305
+
Sbjct: 1219I 1221
>TC207721 UP|Q43466 (Q43466) Protein kinase 3 , complete
Length = 1416
Score = 201 bits (511), Expect = 5e-52
Identities = 116/308 (37%), Positives = 173/308 (55%), Gaps = 12/308 (3%)
Frame = +3
Query: 10 IEGKIVRLGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREI 69
+E + + + KYE K LG GNFG +L R+ + + A+K +E+ + +D N + REI
Sbjct: 105 VELRDLIMDKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGQKIDEN----VAREI 272
Query: 70 STLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLID 129
+ L+HPN++R EV+ + T + +V+EY GGELF++I + G+ +E R FQQLI
Sbjct: 273 INHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLIS 452
Query: 130 GVSYCHNKGVFHRDLKLENVLVDAK--GNIKITDFNLSALPQHCRADGLLH----TTCGS 183
GV YCH + HRDLKLEN L+D +KI DF S LLH +T G+
Sbjct: 453 GVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSLLHSRPKSTVGT 611
Query: 184 PNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDD----RNLAVLYQKIFKADVQ 239
P Y+APE+L+ R YDG +D+WSCGV LYV+L G PF+D RN Q+I +
Sbjct: 612 PAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYK 791
Query: 240 IPRW--LSPGAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDVFIDD 297
IP + +S ++++ +I NP R+++ IK WF + P L + + +
Sbjct: 792 IPDYVHISQDCRHLLSRIFVANPLRRISLKEIKSHPWFLKNL-PRELTESAQAVYYQRGN 968
Query: 298 EAFSIHEV 305
+FSI V
Sbjct: 969 PSFSIQSV 992
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.138 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,341,562
Number of Sequences: 63676
Number of extensions: 219290
Number of successful extensions: 2360
Number of sequences better than 10.0: 752
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of query: 437
length of database: 12,639,632
effective HSP length: 100
effective length of query: 337
effective length of database: 6,272,032
effective search space: 2113674784
effective search space used: 2113674784
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC138579.3