BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138130.5 + phase: 0 /pseudo
(152 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219546 UP|HS70_SOYBN (P26413) Heat shock 70 kDa protein, complete 191 1e-49
TC204159 homologue to UP|Q40151 (Q40151) Hsc70 protein, partial ... 189 3e-49
TC214817 homologue to UP|Q9M4E7 (Q9M4E7) Heat shock protein 70, ... 188 6e-49
TC204160 homologue to UP|HS72_LYCES (P27322) Heat shock cognate ... 182 1e-47
TC234487 similar to UP|Q9SAU8 (Q9SAU8) HSP70, partial (23%) 160 3e-40
TC227445 homologue to UP|O22639 (O22639) Endoplasmic reticulum H... 159 6e-40
BF324184 homologue to PIR|S53126|S53 dnaK-type molecular chapero... 157 1e-39
TC208939 UP|Q39830 (Q39830) BiP isoform A, complete 149 4e-37
TC205463 UP|Q39804 (Q39804) BiP isoform B, complete 143 4e-35
TC205199 homologue to UP|HS7M_PEA (P37900) Heat shock 70 kDa pro... 86 4e-20
BM108096 91 3e-19
TC208940 UP|Q39803 (Q39803) BiP isoform C (Fragment), partial (26%) 85 1e-17
TC221389 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa p... 80 4e-16
TC205201 similar to UP|HS7M_PEA (P37900) Heat shock 70 kDa prote... 77 2e-15
BE804459 similar to PIR|T10248|T10 heat shock protein 70K chlo... 63 6e-11
TC233450 62 1e-10
TC224152 similar to UP|Q8L8N8 (Q8L8N8) 70kD heat shock protein, ... 56 6e-09
TC218151 homologue to UP|O22639 (O22639) Endoplasmic reticulum H... 55 1e-08
BU964671 33 0.069
TC228521 32 0.15
>TC219546 UP|HS70_SOYBN (P26413) Heat shock 70 kDa protein, complete
Length = 2099
Score = 191 bits (485), Expect = 1e-49
Identities = 98/140 (70%), Positives = 113/140 (80%), Gaps = 3/140 (2%)
Frame = +1
Query: 1 MMTKS--VVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAK 58
M TK +GIDLGTTYSC+ VW +N RVEII NDQGNRTTPS+V+FT +RLIGDAAK
Sbjct: 1 MATKEGKAIGIDLGTTYSCVGVW--QNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAK 174
Query: 59 GQATSDPENTVFDAKRLIGRKFSDSVVQNDIMLWPFRVIGVD-DKPMIIVKYKGQEKRFC 117
Q +P+NTVFDAKRLIGR+FSDS VQND+ LWPF+V G DKPMI+V YKG+EK+F
Sbjct: 175 NQVAMNPQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFS 354
Query: 118 PEEISSMILTKMREVAEKFL 137
EEISSM+L KMREVAE FL
Sbjct: 355 AEEISSMVLVKMREVAEAFL 414
>TC204159 homologue to UP|Q40151 (Q40151) Hsc70 protein, partial (22%)
Length = 769
Score = 189 bits (481), Expect = 3e-49
Identities = 95/146 (65%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
Frame = +2
Query: 7 VGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPE 66
+GIDLGTTYSC+ VW ++ RVEII NDQGNRTTPS+V+FT +RLIGDAAK Q +P
Sbjct: 107 IGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPI 280
Query: 67 NTVFDAKRLIGRKFSDSVVQNDIMLWPFRVI-GVDDKPMIIVKYKGQEKRFCPEEISSMI 125
NTVFDAKRLIGR+FSD+ VQ+D+ LWPF+VI G DKPMI+V YKG EK+F EEISSM+
Sbjct: 281 NTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPADKPMIVVNYKGDEKQFSAEEISSMV 460
Query: 126 LTKMREVAEKFLMSPRKECSCYRACL 151
L KM+E+AE +L S K SC+ + L
Sbjct: 461 LIKMKEIAEAYLGSTIKNASCHPSLL 538
>TC214817 homologue to UP|Q9M4E7 (Q9M4E7) Heat shock protein 70, complete
Length = 2364
Score = 188 bits (477), Expect(2) = 6e-49
Identities = 95/137 (69%), Positives = 111/137 (80%), Gaps = 1/137 (0%)
Frame = +2
Query: 7 VGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPE 66
+GIDLGTTYSC+ VW ++ RVEII NDQGNRTTPS+V FT +RLIGDAAK Q +P
Sbjct: 113 IGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPI 286
Query: 67 NTVFDAKRLIGRKFSDSVVQNDIMLWPFRVI-GVDDKPMIIVKYKGQEKRFCPEEISSMI 125
NTVFDAKRLIGR+FSDS VQ+DI LWPF+VI G DKPMI+V YKG+EK+F EEISSM+
Sbjct: 287 NTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGAADKPMIVVNYKGEEKQFAAEEISSMV 466
Query: 126 LTKMREVAEKFLMSPRK 142
L KMRE+AE +L S K
Sbjct: 467 LIKMREIAEAYLGSTVK 517
Score = 22.3 bits (46), Expect(2) = 6e-49
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 142 KECSCYRACLL 152
+EC C+R CLL
Sbjct: 514 EECCCHRPCLL 546
>TC204160 homologue to UP|HS72_LYCES (P27322) Heat shock cognate 70 kDa
protein 2, partial (66%)
Length = 1390
Score = 182 bits (463), Expect(2) = 1e-47
Identities = 91/137 (66%), Positives = 111/137 (80%), Gaps = 1/137 (0%)
Frame = +2
Query: 7 VGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPE 66
+GIDLGTTYSC+ VW ++ RVEII NDQGNRTTPS+V+FT +RLIGDAAK Q +P
Sbjct: 122 IGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 295
Query: 67 NTVFDAKRLIGRKFSDSVVQNDIMLWPFRVI-GVDDKPMIIVKYKGQEKRFCPEEISSMI 125
NTVFDAKRLIGR+FSD+ VQ D+ LWPF+VI G +KPMI+V YKG+EK+F EEISSM+
Sbjct: 296 NTVFDAKRLIGRRFSDASVQGDMKLWPFKVIPGPAEKPMIVVNYKGEEKQFSAEEISSMV 475
Query: 126 LTKMREVAEKFLMSPRK 142
L KM+E+AE +L S K
Sbjct: 476 LMKMKEIAEAYLGSTIK 526
Score = 23.1 bits (48), Expect(2) = 1e-47
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 142 KECSCYRACLL 152
KEC C+ ACLL
Sbjct: 523 KECGCHCACLL 555
>TC234487 similar to UP|Q9SAU8 (Q9SAU8) HSP70, partial (23%)
Length = 457
Score = 160 bits (405), Expect(2) = 3e-40
Identities = 77/111 (69%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
Frame = +1
Query: 31 IHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPENTVFDAKRLIGRKFSDSVVQNDIM 90
IHNDQGN TTPS V+FT QRLIG+AAK QA ++PENTVFDAKRLIGRKFSD V+Q D M
Sbjct: 1 IHNDQGNNTTPSCVAFTDQQRLIGEAAKNQAATNPENTVFDAKRLIGRKFSDPVIQKDKM 180
Query: 91 LWPFRVI-GVDDKPMIIVKYKGQEKRFCPEEISSMILTKMREVAEKFLMSP 140
LWPF+V+ G++DKPMI + YKGQEK EE+SSM+L KMRE+AE +L +P
Sbjct: 181 LWPFKVVAGINDKPMISLNYKGQEKHLLAEEVSSMVLIKMREIAEAYLETP 333
Score = 21.2 bits (43), Expect(2) = 3e-40
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3
Query: 141 RKECSCYRACL 151
R+ECS Y ACL
Sbjct: 333 RRECSGYCACL 365
>TC227445 homologue to UP|O22639 (O22639) Endoplasmic reticulum HSC70-cognate
binding protein precursor, complete
Length = 2254
Score = 159 bits (401), Expect = 6e-40
Identities = 82/134 (61%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 SVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSD 64
+V+GIDLGTTYSC+ V+ +N VEII NDQGNR TPS+V+FT +RLIG+AAK A +
Sbjct: 212 TVIGIDLGTTYSCVGVY--KNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNLAAVN 385
Query: 65 PENTVFDAKRLIGRKFSDSVVQNDIMLWPFRVIGVDDKPMIIVKYK-GQEKRFCPEEISS 123
PE T+FD KRLIGRKF D VQ D+ L P++++ D KP I VK K G+ K F PEEIS+
Sbjct: 386 PERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISA 565
Query: 124 MILTKMREVAEKFL 137
MILTKM+E AE FL
Sbjct: 566 MILTKMKETAEAFL 607
>BF324184 homologue to PIR|S53126|S53 dnaK-type molecular chaperone hsp70 -
rice (fragment), partial (18%)
Length = 398
Score = 157 bits (398), Expect = 1e-39
Identities = 78/116 (67%), Positives = 94/116 (80%), Gaps = 1/116 (0%)
Frame = -3
Query: 7 VGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPE 66
+GIDLGTTYSC+ VW ++ RVEII NDQGNRTTPS+V FT +RLIGDAAK Q +P
Sbjct: 342 IGIDLGTTYSCVGVW--QHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPI 169
Query: 67 NTVFDAKRLIGRKFSDSVVQNDIMLWPFRVI-GVDDKPMIIVKYKGQEKRFCPEEI 121
NTVFDAKRLIGR+FSD+ VQ+DI LWPF+V+ G +KPMI V YKG++K+F EEI
Sbjct: 168 NTVFDAKRLIGRRFSDASVQSDIKLWPFKVLSGPAEKPMIQVSYKGEDKQFAAEEI 1
>TC208939 UP|Q39830 (Q39830) BiP isoform A, complete
Length = 2452
Score = 149 bits (377), Expect = 4e-37
Identities = 80/134 (59%), Positives = 98/134 (72%), Gaps = 1/134 (0%)
Frame = +3
Query: 5 SVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSD 64
+V+GIDLGTTYSC+ V+ +N VEII NDQGNR TPS+ SFT +RLIG+AAK A +
Sbjct: 174 TVIGIDLGTTYSCVGVY--KNGHVEIIANDQGNRITPSW-SFTDSERLIGEAAKNLAAVN 344
Query: 65 PENTVFDAKRLIGRKFSDSVVQNDIMLWPFRVIGVDDKPMIIVKYK-GQEKRFCPEEISS 123
PE +FD KRLIGRKF D VQ D+ L P++++ D KP I K K G+ K F PEEIS+
Sbjct: 345 PERVIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQEKIKDGETKVFSPEEISA 524
Query: 124 MILTKMREVAEKFL 137
MILTKM+E AE FL
Sbjct: 525 MILTKMKETAEAFL 566
>TC205463 UP|Q39804 (Q39804) BiP isoform B, complete
Length = 2383
Score = 143 bits (360), Expect = 4e-35
Identities = 79/134 (58%), Positives = 96/134 (70%), Gaps = 1/134 (0%)
Frame = +3
Query: 5 SVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSD 64
+V+GIDL TTYSC+ V VEII NDQGNR TPS+V+FT +RLIG+AAK A +
Sbjct: 195 TVIGIDL-TTYSCVGV----TDAVEIIANDQGNRITPSWVAFTDSERLIGEAAKIVAAVN 359
Query: 65 PENTVFDAKRLIGRKFSDSVVQNDIMLWPFRVIGVDDKPMIIVKYK-GQEKRFCPEEISS 123
P T+FD KRLIGRKF D VQ D+ L P++++ D KP I VK K G+ K F PEEIS+
Sbjct: 360 PVRTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISA 539
Query: 124 MILTKMREVAEKFL 137
MILTKM+E AE FL
Sbjct: 540 MILTKMKETAEAFL 581
>TC205199 homologue to UP|HS7M_PEA (P37900) Heat shock 70 kDa protein,
mitochondrial precursor, partial (94%)
Length = 2204
Score = 85.5 bits (210), Expect(2) = 4e-20
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = +3
Query: 29 EIIHNDQGNRTTPSFVSFT-KDQRLIGDAAKGQATSDPENTVFDAKRLIGRKFSDSVVQN 87
++I N +G RTTPS V+F K + L+G AK QA ++P NT+F KRLIGR+F DS Q
Sbjct: 186 KVIENSEGARTTPSVVAFNQKAELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDSQTQK 365
Query: 88 DIMLWPFRVIGVDDKPMIIVKYKGQEKRFCPEEISSMILTKMREVAEKFL 137
++ + P++++ + V+ GQ+ + P ++ + +LTKM+E AE +L
Sbjct: 366 EMKMVPYKIVKAPNGD-AWVEANGQQ--YSPSQVGAFVLTKMKETAESYL 506
Score = 28.5 bits (62), Expect(2) = 4e-20
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1
Query: 6 VVGIDLGTTYSCIAV 20
V+GIDLGTT SC++V
Sbjct: 46 VIGIDLGTTNSCVSV 90
>BM108096
Length = 525
Score = 90.5 bits (223), Expect = 3e-19
Identities = 50/136 (36%), Positives = 77/136 (55%), Gaps = 2/136 (1%)
Frame = +3
Query: 17 CIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPENTVFDAKRLI 76
CI V + R ++++ ND+ R TP+ V F QR +G A +P+N++ KRLI
Sbjct: 3 CI-VAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGAASTMMNPKNSISQIKRLI 179
Query: 77 GRKFSDSVVQNDIMLWPFRVI-GVDDKPMIIVKYKGQEKRFCPEEISSMILTKMREVAEK 135
GR+FSD +Q D+ +PF V G D P+I +Y G+ + F P ++ M+L+ ++E+A K
Sbjct: 180 GRQFSDPELQRDLKTFPFVVTEGPDGYPLIXARYLGEARTFTPTQVFGMMLSNLKEIAXK 359
Query: 136 FLMSPRKECS-CYRAC 150
L EC C AC
Sbjct: 360 NL-----ECXRCLIAC 392
>TC208940 UP|Q39803 (Q39803) BiP isoform C (Fragment), partial (26%)
Length = 447
Score = 85.1 bits (209), Expect = 1e-17
Identities = 40/60 (66%), Positives = 48/60 (79%)
Frame = +1
Query: 26 RRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPENTVFDAKRLIGRKFSDSVV 85
R+VEII NDQGNR TPS+V+FT +RLIG+AAK QA +PE T+FD KRLIGRKF D +
Sbjct: 79 RQVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEI 258
>TC221389 homologue to UP|HS7M_PHAVU (Q01899) Heat shock 70 kDa protein,
mitochondrial precursor, partial (36%)
Length = 827
Score = 80.1 bits (196), Expect = 4e-16
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 VVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFT-KDQRLIGDAAKGQATSD 64
V+GIDLGTT SC++V E + ++I N +G RTTPS V+F K + L+G K QA ++
Sbjct: 252 VIGIDLGTTNSCVSVM--EGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPXKRQAVTN 425
Query: 65 PENTVFDAKRLIGRKFSDSVVQ 86
P NT+F KRLIGR+F D+ Q
Sbjct: 426 PTNTLFGTKRLIGRRFDDAQTQ 491
>TC205201 similar to UP|HS7M_PEA (P37900) Heat shock 70 kDa protein,
mitochondrial precursor, partial (18%)
Length = 467
Score = 77.4 bits (189), Expect = 2e-15
Identities = 40/76 (52%), Positives = 54/76 (70%), Gaps = 1/76 (1%)
Frame = +1
Query: 6 VVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFT-KDQRLIGDAAKGQATSD 64
V+GIDLGTT SC++V E + ++I N +G RTTPS V+F K + L+G AK QA ++
Sbjct: 244 VIGIDLGTTNSCVSVM--EGKNPKVIENSEGARTTPSVVAFNQKAELLVGTPAKRQAVTN 417
Query: 65 PENTVFDAKRLIGRKF 80
P NT+F KRLIGR+F
Sbjct: 418 PTNTLFGTKRLIGRRF 465
>BE804459 similar to PIR|T10248|T10 heat shock protein 70K chloroplast -
cucumber, partial (18%)
Length = 478
Score = 62.8 bits (151), Expect = 6e-11
Identities = 45/129 (34%), Positives = 70/129 (53%), Gaps = 1/129 (0%)
Frame = +2
Query: 1 MMTKSVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKD-QRLIGDAAKG 59
++ + V IDLGTT +A ++ + II N +G +TTP ++T + RL+G AK
Sbjct: 92 VVNEKVACIDLGTTNCSVAAFV--GGKPTIISNSRGQKTTPFVRAYTNNGDRLVGLIAKR 265
Query: 60 QATSDPENTVFDAKRLIGRKFSDSVVQNDIMLWPFRVIGVDDKPMIIVKYKGQEKRFCPE 119
Q +PENT+F +R IG K S+ V + +RVI DD + + K+ +
Sbjct: 266 QVVVNPENTLFFVERFIGPKMSE--VDEESKHVSYRVIR-DDNGNVKLDCPAIGKQCAAD 436
Query: 120 EISSMILTK 128
EIS+ +LTK
Sbjct: 437 EISAQVLTK 463
>TC233450
Length = 677
Score = 62.0 bits (149), Expect = 1e-10
Identities = 39/115 (33%), Positives = 61/115 (52%), Gaps = 1/115 (0%)
Frame = +3
Query: 5 SVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSD 64
SVVG D+G IAV R ++++ N + R TP+ V F++ QR+ G A A
Sbjct: 225 SVVGFDIGNENCVIAVV--RQRGIDVLLNYESKRETPAVVCFSEKQRI*GSAGAASAMMH 398
Query: 65 PENTVFDAKRLIGRKFSDSVVQNDIMLWPFRVI-GVDDKPMIIVKYKGQEKRFCP 118
++T+ KRLIGRKF+D V+ ++ + P + G + I +KY + F P
Sbjct: 399 IKSTISQIKRLIGRKFADPDVKKELKMLPGKTSEGQEGGISIHLKYSAEIHVFTP 563
>TC224152 similar to UP|Q8L8N8 (Q8L8N8) 70kD heat shock protein, partial
(33%)
Length = 563
Score = 56.2 bits (134), Expect = 6e-09
Identities = 42/133 (31%), Positives = 68/133 (50%), Gaps = 5/133 (3%)
Frame = +1
Query: 7 VGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSFTKDQRLIGDAAKGQATSDPE 66
+GID+GT+ +AVW +VE++ N + + S+V+F KD G + + D
Sbjct: 37 IGIDIGTSQCSVAVW--NGSQVELLKNTRNQKIMKSYVTF-KDNIPSGGVSSQLSHEDEM 207
Query: 67 ---NTVFDAKRLIGRKFSDSVVQNDIMLWPFRV--IGVDDKPMIIVKYKGQEKRFCPEEI 121
T+F+ KRLIGR +D VV L PF V + + +P I + PEE+
Sbjct: 208 LSGATIFNMKRLIGRVDTDPVVHACKNL-PFLVQTLDIGVRPFIAALVNNMWRSTTPEEV 384
Query: 122 SSMILTKMREVAE 134
++ L ++R +AE
Sbjct: 385 LAIFLVELRAMAE 423
>TC218151 homologue to UP|O22639 (O22639) Endoplasmic reticulum HSC70-cognate
binding protein precursor, partial (35%)
Length = 922
Score = 55.5 bits (132), Expect = 1e-08
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +1
Query: 5 SVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSF-VSFTKDQR-LIGDAAKGQAT 62
+V+GIDLGTTYSC+ V+ +N VEII NDQGNR TP V+F D ++ A+ + T
Sbjct: 193 TVIGIDLGTTYSCVGVY--KNGHVEIIANDQGNRITPQIEVTFEVDANGILNVKAEDKGT 366
Query: 63 SDPEN-TVFDAKRLIGRKFSDSVVQ 86
E T+ + K + ++ D +V+
Sbjct: 367 GKSEKITITNEKGRLSQEEIDRMVR 441
>BU964671
Length = 181
Score = 32.7 bits (73), Expect = 0.069
Identities = 18/42 (42%), Positives = 25/42 (58%)
Frame = +1
Query: 5 SVVGIDLGTTYSCIAVWLDENRRVEIIHNDQGNRTTPSFVSF 46
SVVG D G SCI V + R ++++ ND+ R TP+ V F
Sbjct: 61 SVVGFDFGNE-SCI-VAVARQRGIDVVLNDESKRETPAIVCF 180
>TC228521
Length = 1207
Score = 31.6 bits (70), Expect = 0.15
Identities = 16/46 (34%), Positives = 29/46 (62%), Gaps = 4/46 (8%)
Frame = +2
Query: 93 PFRVIGVDDKPMIIVKYKGQE----KRFCPEEISSMILTKMREVAE 134
PF+V+ VDDKP I+ + ++ K+ +EI S ++T ++E+ E
Sbjct: 575 PFKVVTVDDKPENIINEEDEKLRSLKQEWGDEIYSAVVTALKEINE 712
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,230,967
Number of Sequences: 63676
Number of extensions: 64185
Number of successful extensions: 338
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of query: 152
length of database: 12,639,632
effective HSP length: 89
effective length of query: 63
effective length of database: 6,972,468
effective search space: 439265484
effective search space used: 439265484
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)
Medicago: description of AC138130.5