BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138015.8 + phase: 0
(261 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225597 similar to UP|WR69_ARATH (Q93WV5) Probable WRKY transcr... 353 6e-98
TC225600 similar to UP|WR65_ARATH (Q9LP56) Probable WRKY transcr... 197 5e-51
TC225599 homologue to UP|WR65_ARATH (Q9LP56) Probable WRKY trans... 149 1e-36
TC225602 similar to UP|WR65_ARATH (Q9LP56) Probable WRKY transcr... 144 4e-35
TC229523 similar to UP|Q6IEL5 (Q6IEL5) WRKY transcription factor... 122 1e-28
TC225601 similar to UP|WR65_ARATH (Q9LP56) Probable WRKY transcr... 122 2e-28
TC226891 similar to GB|AAM61419.1|21537078|AY084855 putaive DNA-... 111 3e-25
TC208495 homologue to UP|Q9FXS1 (Q9FXS1) WRKY transcription fact... 108 2e-24
TC216811 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcr... 108 2e-24
TC208493 similar to UP|Q9FXS1 (Q9FXS1) WRKY transcription factor... 108 2e-24
TC207514 similar to UP|WR21_ARATH (O04336) Probable WRKY transcr... 107 4e-24
TC226892 similar to UP|Q6IEN1 (Q6IEN1) WRKY transcription factor... 107 5e-24
TC216418 similar to UP|Q9FXS1 (Q9FXS1) WRKY transcription factor... 107 5e-24
TC216813 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcr... 106 9e-24
TC228539 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcr... 101 3e-22
TC231646 similar to UP|Q84J64 (Q84J64) WRKY transcription factor... 100 5e-22
TC216420 similar to UP|WR15_ARATH (O22176) Probable WRKY transcr... 100 7e-22
CD397604 100 9e-22
TC229524 similar to UP|Q6IEL5 (Q6IEL5) WRKY transcription factor... 93 1e-19
TC219568 similar to UP|WR32_ARATH (P59583) Probable WRKY transcr... 91 7e-19
>TC225597 similar to UP|WR69_ARATH (Q93WV5) Probable WRKY transcription
factor 69 (WRKY DNA-binding protein 69), partial (47%)
Length = 1180
Score = 353 bits (905), Expect = 6e-98
Identities = 183/271 (67%), Positives = 205/271 (75%), Gaps = 10/271 (3%)
Frame = +1
Query: 1 MYKRRFNTKPLYVADREEPEPELKLEPILEDGPASPSSCEDTKIEESSPKKRREMKKRVV 60
M+ RRF+ K ++VAD +EPE EP E GPASPSS EDTK E SPKKRREMKKRVV
Sbjct: 160 MHHRRFS-KLIHVADPDEPESGP--EPASEAGPASPSSGEDTKTEAPSPKKRREMKKRVV 330
Query: 61 TIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERS 120
TIPI DV+GSKS+GE YPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERS
Sbjct: 331 TIPIGDVDGSKSKGENYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERS 510
Query: 121 RVDPTNLLVTYAHEHNHSLPLPKSHHSSTNAVTATVTAAVDTPSPVESPAATPQPEDRPI 180
RVDPT L+VTYA+EHNHSLPLPKS+ S A +A V+ + SP +S A P E+ +
Sbjct: 511 RVDPTKLIVTYAYEHNHSLPLPKSNSS---AASAAVSDGATSSSPADSAARYPPEEEMKV 681
Query: 181 FVTHPDFDLTGD--------HHAVFGWFDDIVSTGVLVSPICGGVEDVTLTMREEDESLF 232
F T D +L GD HH FGWFDD+ STGVL SPICG V+DV + MREEDESLF
Sbjct: 682 FATDSDLELAGDAAVLLSHHHHHHFGWFDDVTSTGVLESPICGEVDDVAVPMREEDESLF 861
Query: 233 ADLGELPECSTVFRQRNIP--SVFQYSGITG 261
ADLGELPECS VFR+ NIP S + GITG
Sbjct: 862 ADLGELPECSAVFRRMNIPATSAIRCGGITG 954
>TC225600 similar to UP|WR65_ARATH (Q9LP56) Probable WRKY transcription
factor 65 (WRKY DNA-binding protein 65), partial (34%)
Length = 1162
Score = 197 bits (500), Expect = 5e-51
Identities = 119/252 (47%), Positives = 148/252 (58%), Gaps = 8/252 (3%)
Frame = +3
Query: 4 RRFNTKPLYVADREEPEPELKLEPILEDGPASPSSCEDTKIEE--SSPKKRREMKKRVVT 61
R+ N ++ + ++ E + E P+S D + SS K+RR ++KRVV
Sbjct: 174 RKKNRNVNSYTSEQDQDTDIAQENLAESPPSSTVFNIDGLVPSPTSSSKRRRAIQKRVVQ 353
Query: 62 IPIADVEGSKSRGETY-PPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERS 120
IP+ + EG + +GE+ PPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERS
Sbjct: 354 IPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERS 533
Query: 121 RVDPTNLLVTYAHEHNHSLPLPKSHHSSTNAVTATVTAAVDTPSPVESPAATPQPEDRPI 180
VDPT L+VTY+ +HNH P ++H T P PV P +PE++
Sbjct: 534 CVDPTMLVVTYSSDHNHPWPPSRNHARPTK-----------KPEPVPDPV---EPEEK-- 665
Query: 181 FVTHPDFDLTGDHHAVFGWFDDIVSTG--VLVSPICGGV--EDVTL-TMREEDESLFADL 235
T + GW ++ +T VL SP DV L MREEDESLFADL
Sbjct: 666 -FADESMITTAEE---LGWLGEMEATSSTVLESPFMATTYHADVALIPMREEDESLFADL 833
Query: 236 GELPECSTVFRQ 247
GELPECS VFRQ
Sbjct: 834 GELPECSVVFRQ 869
>TC225599 homologue to UP|WR65_ARATH (Q9LP56) Probable WRKY transcription
factor 65 (WRKY DNA-binding protein 65), partial (12%)
Length = 621
Score = 149 bits (376), Expect = 1e-36
Identities = 78/139 (56%), Positives = 93/139 (66%), Gaps = 9/139 (6%)
Frame = +1
Query: 132 AHEHNHSLPLPKSHHSSTNAVTATVTAAVDTPSPVESPAATPQPEDRPIFVTHPDFDLTG 191
A+EHNHSLP PKS+ S+ +A + A + P+ES A P E+ +F T D +L G
Sbjct: 1 AYEHNHSLPFPKSNSSAASAAVSDGAAVL----PIESAARFPPEEEMTVFATDSDLELAG 168
Query: 192 D-------HHAVFGWFDDIVSTGVLVSPICGGVEDVTLTMREEDESLFADLGELPECSTV 244
D HH FGWFDD+ STGVL SPICG V+DV + MREEDESLFADLGELPECS V
Sbjct: 169 DASVLLSHHHHHFGWFDDVASTGVLESPICGEVDDVAVPMREEDESLFADLGELPECSAV 348
Query: 245 FRQRNIP--SVFQYSGITG 261
FR+RNIP S + GITG
Sbjct: 349 FRRRNIPATSAIRCGGITG 405
>TC225602 similar to UP|WR65_ARATH (Q9LP56) Probable WRKY transcription
factor 65 (WRKY DNA-binding protein 65), partial (21%)
Length = 661
Score = 144 bits (363), Expect = 4e-35
Identities = 75/133 (56%), Positives = 96/133 (71%), Gaps = 4/133 (3%)
Frame = +1
Query: 3 KRRFNTKPLYVADREEP-EPELKLEPILEDGPASPSSCEDTKIEESSP--KKRREMKKRV 59
K R N + Y +++++ + ++ E I E P+S D + +P K+RR ++KRV
Sbjct: 262 KFRKNNRNSYTSEQDQDTDHDVAQENIAESPPSSTVFNIDGLVPSPTPSSKRRRAIQKRV 441
Query: 60 VTIPIADVEGSKSRGETY-PPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVE 118
V IP+ + EG + +GE+ PPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVE
Sbjct: 442 VQIPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVE 621
Query: 119 RSRVDPTNLLVTY 131
RS VDPT L+VTY
Sbjct: 622 RSCVDPTMLVVTY 660
>TC229523 similar to UP|Q6IEL5 (Q6IEL5) WRKY transcription factor 66, partial
(13%)
Length = 523
Score = 122 bits (307), Expect = 1e-28
Identities = 59/116 (50%), Positives = 78/116 (66%), Gaps = 1/116 (0%)
Frame = +3
Query: 35 SPSSCEDTKIEESSPKKRREMKKRVVTIPIADVEGS-KSRGETYPPSDSWAWRKYGQKPI 93
S + + K E + KKR+ ++K VV + + + G K+ G PSD W+WRKYGQKPI
Sbjct: 171 SEEASSEHKSETQTSKKRKMVEKTVVAVRVGEKVGKLKNEGL---PSDFWSWRKYGQKPI 341
Query: 94 KGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLPLPKSHHSST 149
KGSPYPRGYY+CS+SKGC A+KQVER R D + L++TY HNH P P + S+T
Sbjct: 342 KGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPCPTPITTKSTT 509
>TC225601 similar to UP|WR65_ARATH (Q9LP56) Probable WRKY transcription
factor 65 (WRKY DNA-binding protein 65), partial (24%)
Length = 409
Score = 122 bits (306), Expect = 2e-28
Identities = 77/163 (47%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Frame = +1
Query: 101 GYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLPLPKSHHSSTNAVTATVTAAV 160
GYYRCSSSKGCPARKQVERSRVDPT L+VTYA+EHNHSLP PK S+++A +A
Sbjct: 1 GYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPFPK---SNSSAASAA----- 156
Query: 161 DTPSPVESPAATPQPEDRPIFVTHPDFDLTGDHHAVFGWFDDIVSTGVLVSPICGGVEDV 220
VS G V P
Sbjct: 157 -------------------------------------------VSDGAAVLP-------- 183
Query: 221 TLTMREEDESLFADLGELPECSTVFRQRNIP--SVFQYSGITG 261
MRE+DESLFADLGELPECS VFR+RNIP S + GITG
Sbjct: 184 ---MREDDESLFADLGELPECSAVFRRRNIPATSAIRCGGITG 303
>TC226891 similar to GB|AAM61419.1|21537078|AY084855 putaive DNA-binding
protein {Arabidopsis thaliana;} , partial (41%)
Length = 1187
Score = 111 bits (278), Expect = 3e-25
Identities = 62/136 (45%), Positives = 75/136 (54%), Gaps = 18/136 (13%)
Frame = +2
Query: 24 KLEPILEDGPASP-------SSCED------TKIEESSPKKRREMKKRVVTIP-----IA 65
K+ P L A P C D TK KKR+ KR + +P IA
Sbjct: 494 KIGPFLPPSAAKPPLSSPHRKKCRDAAAALSTKPSCHCSKKRKSRVKRTIRVPAISSKIA 673
Query: 66 DVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPT 125
D+ P D ++WRKYGQKPIKGSPYPRGYY+CS+ +GCPARK VER++ DP
Sbjct: 674 DI-----------PPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPK 820
Query: 126 NLLVTYAHEHNHSLPL 141
L+VTY EH H LPL
Sbjct: 821 MLIVTYEGEHRHVLPL 868
>TC208495 homologue to UP|Q9FXS1 (Q9FXS1) WRKY transcription factor
NtEIG-D48, partial (31%)
Length = 676
Score = 108 bits (271), Expect = 2e-24
Identities = 51/92 (55%), Positives = 66/92 (71%)
Frame = +3
Query: 48 SPKKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSS 107
S K R+ +KRVV +P ++ + P D ++WRKYGQKPIKGSP+PRGYY+CSS
Sbjct: 207 SKKSRKMRQKRVVRVPAISLKMADI------PPDDYSWRKYGQKPIKGSPHPRGYYKCSS 368
Query: 108 SKGCPARKQVERSRVDPTNLLVTYAHEHNHSL 139
+GCPARK VER+ DP+ L+VTY EHNH+L
Sbjct: 369 VRGCPARKHVERALDDPSMLVVTYEGEHNHTL 464
>TC216811 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcription
factor 11 (WRKY DNA-binding protein 11), partial (29%)
Length = 686
Score = 108 bits (270), Expect = 2e-24
Identities = 51/90 (56%), Positives = 64/90 (70%)
Frame = +1
Query: 50 KKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSK 109
K+R+ K+ V +P+ S+ PP D ++WRKYGQKPIKGSPYPRGYY+CSS +
Sbjct: 97 KRRKNRVKKTVRVPVIS-----SKIADIPP-DEYSWRKYGQKPIKGSPYPRGYYKCSSVR 258
Query: 110 GCPARKQVERSRVDPTNLLVTYAHEHNHSL 139
GCPARK VER+ DPT L+VTY EH HS+
Sbjct: 259 GCPARKHVERAPDDPTMLIVTYEGEHRHSM 348
>TC208493 similar to UP|Q9FXS1 (Q9FXS1) WRKY transcription factor NtEIG-D48,
partial (31%)
Length = 563
Score = 108 bits (270), Expect = 2e-24
Identities = 51/92 (55%), Positives = 66/92 (71%)
Frame = +1
Query: 48 SPKKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSS 107
S K R+ +KRVV +P ++ + P D ++WRKYGQKPIKGSP+PRGYY+CSS
Sbjct: 133 SKKSRQMRQKRVVRVPAISLKMADI------PPDDYSWRKYGQKPIKGSPHPRGYYKCSS 294
Query: 108 SKGCPARKQVERSRVDPTNLLVTYAHEHNHSL 139
+GCPARK VER+ DP+ L+VTY EHNH+L
Sbjct: 295 VRGCPARKHVERALDDPSMLVVTYEGEHNHTL 390
>TC207514 similar to UP|WR21_ARATH (O04336) Probable WRKY transcription
factor 21 (WRKY DNA-binding protein 21), partial (41%)
Length = 1285
Score = 107 bits (268), Expect = 4e-24
Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 5/109 (4%)
Frame = +3
Query: 50 KKRREMKKRVVTIP-----IADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYR 104
KKR+ KR + +P +AD+ P D ++WRKYGQKPIKGSP+PRGYY+
Sbjct: 735 KKRKHRVKRAIKVPAISNKLADI-----------PPDDYSWRKYGQKPIKGSPHPRGYYK 881
Query: 105 CSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLPLPKSHHSSTNAVT 153
CSS +GCPARK VER +PT L+VTY EHNH PK S NA T
Sbjct: 882 CSSMRGCPARKHVERCLEEPTMLIVTYEGEHNH----PKLPTQSANA*T 1016
>TC226892 similar to UP|Q6IEN1 (Q6IEN1) WRKY transcription factor 51, partial
(47%)
Length = 1269
Score = 107 bits (267), Expect = 5e-24
Identities = 53/101 (52%), Positives = 68/101 (66%), Gaps = 6/101 (5%)
Frame = +3
Query: 50 KKRREMKKRVVTIP-----IADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYR 104
K+R+ KR++ +P IAD+ P D ++WRKYGQKPIKGSPYPRGYY+
Sbjct: 714 KRRKSRVKRMIRVPAISSKIADI-----------PVDEYSWRKYGQKPIKGSPYPRGYYK 860
Query: 105 CSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLP-LPKS 144
CSS +GCPARK VER++ DP L+VTY EH H P LP++
Sbjct: 861 CSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQPRLPET 983
>TC216418 similar to UP|Q9FXS1 (Q9FXS1) WRKY transcription factor NtEIG-D48,
partial (51%)
Length = 1461
Score = 107 bits (267), Expect = 5e-24
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +1
Query: 50 KKRREMK-KRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSS 108
KK R+M+ KRVV +P ++ + P D ++WRKYGQKPIKGSP+PRGYY+CSS
Sbjct: 808 KKSRKMRLKRVVRVPAISLKMADI------PPDDYSWRKYGQKPIKGSPHPRGYYKCSSV 969
Query: 109 KGCPARKQVERSRVDPTNLLVTYAHEHNHSL 139
+GCPARK VER+ DP L+VTY EHNH+L
Sbjct: 970 RGCPARKHVERALDDPAMLVVTYEGEHNHTL 1062
>TC216813 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcription
factor 11 (WRKY DNA-binding protein 11), partial (46%)
Length = 1173
Score = 106 bits (265), Expect = 9e-24
Identities = 50/90 (55%), Positives = 63/90 (69%)
Frame = +2
Query: 50 KKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSK 109
K+R+ K+ V +P S+ PP D ++WRKYGQKPIKGSPYPRGYY+CS+ +
Sbjct: 716 KRRKNRVKKTVRVPAIS-----SKVADIPP-DEYSWRKYGQKPIKGSPYPRGYYKCSTVR 877
Query: 110 GCPARKQVERSRVDPTNLLVTYAHEHNHSL 139
GCPARK VER+ DPT L+VTY EH HS+
Sbjct: 878 GCPARKHVERASDDPTMLIVTYEGEHRHSI 967
>TC228539 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcription
factor 11 (WRKY DNA-binding protein 11), partial (63%)
Length = 1265
Score = 101 bits (252), Expect = 3e-22
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = +2
Query: 50 KKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSK 109
K+R+ K V +P S+ PP D ++WRKYGQKPIKGSPYPRGYY+CS+ +
Sbjct: 740 KRRKNRVKSTVRVPAIS-----SKVADIPP-DEYSWRKYGQKPIKGSPYPRGYYKCSTIR 901
Query: 110 GCPARKQVERSRVDPTNLLVTYAHEHNHSL 139
GCPARK VER+ DP L+VTY EH H++
Sbjct: 902 GCPARKHVERAPDDPAMLIVTYEGEHRHAV 991
>TC231646 similar to UP|Q84J64 (Q84J64) WRKY transcription factor 22, partial
(31%)
Length = 695
Score = 100 bits (250), Expect = 5e-22
Identities = 47/76 (61%), Positives = 55/76 (71%)
Frame = +1
Query: 50 KKRREMKKRVVTIPIADVEGSKSRGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSK 109
K+R+ K+V +P+ ++ SD WAWRKYGQKPIKGSPYPRGYYRCSSSK
Sbjct: 490 KRRKNQLKKVCQVPVENLS-----------SDIWAWRKYGQKPIKGSPYPRGYYRCSSSK 636
Query: 110 GCPARKQVERSRVDPT 125
GC ARKQVER+R DPT
Sbjct: 637 GCLARKQVERNRSDPT 684
>TC216420 similar to UP|WR15_ARATH (O22176) Probable WRKY transcription
factor 15 (WRKY DNA-binding protein 15), partial (21%)
Length = 422
Score = 100 bits (249), Expect = 7e-22
Identities = 42/61 (68%), Positives = 51/61 (82%)
Frame = +3
Query: 79 PSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHS 138
P D ++WRKYGQKPIKGSP+PRGYY+CSS +GCPARK VER+ DP L+VTY EHNH+
Sbjct: 3 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHT 182
Query: 139 L 139
+
Sbjct: 183 V 185
>CD397604
Length = 531
Score = 100 bits (248), Expect = 9e-22
Identities = 43/69 (62%), Positives = 54/69 (77%)
Frame = -3
Query: 79 PSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHS 138
P D ++WRKYGQKPIKGSP+PRGYY+CSS++GCPARK VER +P+ L+VTY +HNH
Sbjct: 469 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSTRGCPARKHVERCLEEPSMLIVTYEGDHNH- 293
Query: 139 LPLPKSHHS 147
PK H+
Sbjct: 292 ---PKLQHN 275
>TC229524 similar to UP|Q6IEL5 (Q6IEL5) WRKY transcription factor 66, partial
(8%)
Length = 442
Score = 92.8 bits (229), Expect = 1e-19
Identities = 45/77 (58%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +2
Query: 43 KIEESSPKKRREMKKRVVTIPIADVEGS-KSRGETYPPSDSWAWRKYGQKPIKGSPYPRG 101
K E + KKR+ ++K VV + + G K+ G PSD W+WRKYGQKPIKGSPYPRG
Sbjct: 221 KSETQTSKKRKMVEKTVVAVRTGENVGKLKNEGL---PSDFWSWRKYGQKPIKGSPYPRG 391
Query: 102 YYRCSSSKGCPARKQVE 118
YY+CS+SKGC A+KQVE
Sbjct: 392 YYKCSTSKGCSAKKQVE 442
>TC219568 similar to UP|WR32_ARATH (P59583) Probable WRKY transcription
factor 32 (WRKY DNA-binding protein 32), partial (28%)
Length = 760
Score = 90.5 bits (223), Expect = 7e-19
Identities = 54/161 (33%), Positives = 86/161 (52%), Gaps = 8/161 (4%)
Frame = +2
Query: 40 EDTKIEESSPKKRREMKKRVVTIPIADVE-GSKSR------GETYPPSDSWAWRKYGQKP 92
++ + E PKKR MKK +T + V+ G KS+ G+ +D + WRKYGQK
Sbjct: 113 KEEHVNEPVPKKR--MKKGDLTDMDSPVKPGKKSKFVVHAAGDVGISADGYRWRKYGQKM 286
Query: 93 IKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLLVTYAHEHNHSLPLPKSHHSSTNAV 152
+KG+P+PR YYRC+S+ GCP RK +E + + +++TY H+H +P+PK H +A
Sbjct: 287 VKGNPHPRNYYRCTSA-GCPVRKHIETAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAP 463
Query: 153 TATVTAAVDTPS-PVESPAATPQPEDRPIFVTHPDFDLTGD 192
A S V+ P + + + + +LTG+
Sbjct: 464 LVAAAAPASMNSLQVKKPDSPQNKKISTQWSVDTEGELTGE 586
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,897,807
Number of Sequences: 63676
Number of extensions: 215428
Number of successful extensions: 1821
Number of sequences better than 10.0: 213
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of query: 261
length of database: 12,639,632
effective HSP length: 95
effective length of query: 166
effective length of database: 6,590,412
effective search space: 1094008392
effective search space used: 1094008392
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC138015.8