BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC138012.5 + phase: 0
(182 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215294 similar to UP|Q40090 (Q40090) SPF1 protein, partial (51%) 137 2e-33
TC207139 similar to UP|Q8W1M6 (Q8W1M6) WRKY-like drought-induced... 97 4e-21
TC221170 similar to UP|Q94IB3 (Q94IB3) WRKY DNA-binding protein,... 91 2e-19
TC218972 similar to UP|Q9ZPL6 (Q9ZPL6) DNA-binding protein 2, pa... 89 9e-19
TC220545 similar to UP|Q40090 (Q40090) SPF1 protein, partial (23%) 82 1e-16
TC211407 similar to UP|Q39658 (Q39658) SPF1-like DNA-binding pro... 59 1e-15
TC215296 similar to UP|Q40090 (Q40090) SPF1 protein, partial (26%) 77 3e-15
TC215297 similar to UP|Q40090 (Q40090) SPF1 protein, partial (33%) 77 4e-15
TC215295 similar to UP|Q94IB4 (Q94IB4) WRKY DNA-binding protein ... 75 2e-14
TC232786 similar to UP|Q947G7 (Q947G7) Thermal hysteresis protei... 75 2e-14
TC217811 similar to UP|Q39658 (Q39658) SPF1-like DNA-binding pro... 75 2e-14
TC207064 similar to UP|Q8W1M6 (Q8W1M6) WRKY-like drought-induced... 73 8e-14
BF424785 73 8e-14
TC220597 weakly similar to UP|WR32_ARATH (P59583) Probable WRKY ... 72 1e-13
BM094724 similar to GP|18158619|gb WRKY-like drought-induced pro... 71 3e-13
TC232344 homologue to UP|WR13_ARATH (Q9SVB7) Probable WRKY trans... 70 5e-13
TC221320 similar to UP|Q6IEM2 (Q6IEM2) WRKY transcription factor... 70 5e-13
TC219365 similar to UP|Q6IEM2 (Q6IEM2) WRKY transcription factor... 70 7e-13
TC225725 similar to UP|Q9FR29 (Q9FR29) Transcription factor WRKY... 69 9e-13
TC218971 similar to UP|Q9XJ26 (Q9XJ26) NtWRKY1, partial (11%) 68 2e-12
>TC215294 similar to UP|Q40090 (Q40090) SPF1 protein, partial (51%)
Length = 1737
Score = 137 bits (346), Expect = 2e-33
Identities = 71/137 (51%), Positives = 95/137 (68%), Gaps = 3/137 (2%)
Frame = +1
Query: 49 NNRNEFQSDYSNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVK 108
N+ N FQSDY N Q+++ RR DDGYNW+KY +K KGSEN RSYYKCT+PNC K
Sbjct: 334 NHSNGFQSDYGNYPPQSQTLSRRS--DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTK 507
Query: 109 KKVERTIDGEVIETLYKGTHNHWKPTSSMKRNSSSEYLYSLLPSETGSIDLQDQSF---G 165
KKVER++DG++ E +YKGTHNH KP ++ +RNSS+ ++ S + ++ DQS+ G
Sbjct: 508 KKVERSLDGQITEIVYKGTHNHPKPQNT-RRNSSNSSSLAIPHSNSIRTEIPDQSYATHG 684
Query: 166 SEQLDSDEEPTKSSVSI 182
S Q+DS P SS+SI
Sbjct: 685 SGQMDSAATPENSSISI 735
Score = 75.1 bits (183), Expect = 2e-14
Identities = 38/83 (45%), Positives = 50/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV KG+ N RSYYKCT P C V+K VER + D + T Y+G HNH P
Sbjct: 922 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 1101
Query: 134 TSSMKRNSSSEYLYSLLPSETGS 156
+ R S S + +P+ +
Sbjct: 1102 AA---RGSGSHSVNRPMPNNASN 1161
>TC207139 similar to UP|Q8W1M6 (Q8W1M6) WRKY-like drought-induced protein,
partial (85%)
Length = 1774
Score = 97.1 bits (240), Expect = 4e-21
Identities = 46/107 (42%), Positives = 66/107 (60%), Gaps = 3/107 (2%)
Frame = +2
Query: 40 VAIEIDGVDNNRNE---FQSDYSNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQRS 96
V +++D +++ N Q+ + R S DDGYNW+KY +K+ KGSE RS
Sbjct: 326 VDVDLDDINHKGNTATGLQASHVEVRGSGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRS 505
Query: 97 YYKCTWPNCFVKKKVERTIDGEVIETLYKGTHNHWKPTSSMKRNSSS 143
YYKCT PNC VKK ER+ DG++ E +YKGTH+H KP S + ++ +
Sbjct: 506 YYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSCRYSTGT 646
Score = 72.4 bits (176), Expect = 1e-13
Identities = 36/71 (50%), Positives = 47/71 (65%), Gaps = 1/71 (1%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV +G+ N RSYYKCT C V+K VER + D + + T Y+G HNH P
Sbjct: 968 DDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVP 1147
Query: 134 TSSMKRNSSSE 144
+ RNSS +
Sbjct: 1148 AA---RNSSHD 1171
>TC221170 similar to UP|Q94IB3 (Q94IB3) WRKY DNA-binding protein, partial
(14%)
Length = 936
Score = 91.3 bits (225), Expect = 2e-19
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +3
Query: 55 QSDYSNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVERT 114
+ D S V +DGYNW+KY +K KGSE SYYKCT PNC VKKKVER+
Sbjct: 369 EGDQRGNGDSMASGVGGAPSEDGYNWRKYGQKQVKGSEYPLSYYKCTHPNCQVKKKVERS 548
Query: 115 IDGEVIETLYKGTHNHWKP 133
+G + E +YKGTHNH KP
Sbjct: 549 HEGHITEIIYKGTHNHPKP 605
>TC218972 similar to UP|Q9ZPL6 (Q9ZPL6) DNA-binding protein 2, partial (33%)
Length = 1177
Score = 89.4 bits (220), Expect = 9e-19
Identities = 38/59 (64%), Positives = 45/59 (75%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVERTIDGEVIETLYKGTHNHWKP 133
DDGYNW+KY +K KGSE RSYYKCT NC VKKKVER+++G V +YKG HNH +P
Sbjct: 41 DDGYNWRKYGQKQVKGSEFPRSYYKCTHSNCSVKKKVERSLEGHVTAIIYKGEHNHQRP 217
Score = 75.1 bits (183), Expect = 2e-14
Identities = 39/101 (38%), Positives = 58/101 (56%), Gaps = 1/101 (0%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV KG+ RSYYKCT C V+K VER + D + + T Y+G HNH P
Sbjct: 545 DDGYRWRKYGQKVVKGNPYXRSYYKCTTQGCNVRKHVERASTDPKAVITTYEGKHNHDVP 724
Query: 134 TSSMKRNSSSEYLYSLLPSETGSIDLQDQSFGSEQLDSDEE 174
+ ++ + S L S + + + +FGS + +E+
Sbjct: 725 AAKNNSHTMASNTASQLKSH--NTNPEKHNFGSRGMGGNEQ 841
>TC220545 similar to UP|Q40090 (Q40090) SPF1 protein, partial (23%)
Length = 785
Score = 82.0 bits (201), Expect = 1e-16
Identities = 37/63 (58%), Positives = 47/63 (73%)
Frame = +1
Query: 48 DNNRNEFQSDYSNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFV 107
+N+RN FQSD+ N + Q ++ R + DDGYNW+KY +K KGSEN RSYYKCT+PNC
Sbjct: 598 NNHRNGFQSDHKNYQPQQVQTLSRRS-DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPT 774
Query: 108 KKK 110
KKK
Sbjct: 775 KKK 783
>TC211407 similar to UP|Q39658 (Q39658) SPF1-like DNA-binding protein,
partial (33%)
Length = 784
Score = 59.3 bits (142), Expect(2) = 1e-15
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKK 110
DDGYNW+KY +K KGSE RSYYKCT NC VK+K
Sbjct: 482 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCVVKEK 589
Score = 39.7 bits (91), Expect(2) = 1e-15
Identities = 16/37 (43%), Positives = 23/37 (61%)
Frame = +3
Query: 108 KKKVERTIDGEVIETLYKGTHNHWKPTSSMKRNSSSE 144
KKKVER DG + E +YKG HNH K ++ + + +
Sbjct: 582 KKKVERAPDGHITEIIYKGQHNHEKAXANRRAQDNXD 692
>TC215296 similar to UP|Q40090 (Q40090) SPF1 protein, partial (26%)
Length = 1278
Score = 77.4 bits (189), Expect = 3e-15
Identities = 37/83 (44%), Positives = 51/83 (60%), Gaps = 1/83 (1%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV KG+ N RSYYKCT+P C V+K VER + D + T Y+G HNH P
Sbjct: 335 DDGYRWRKYGQKVVKGNPNPRSYYKCTFPGCPVRKHVERASQDLRAVITTYEGKHNHDVP 514
Query: 134 TSSMKRNSSSEYLYSLLPSETGS 156
+ N+S ++ + T +
Sbjct: 515 AARGSGNNSISRSLPIITNTTNN 583
Score = 35.8 bits (81), Expect = 0.011
Identities = 21/58 (36%), Positives = 32/58 (54%)
Frame = +2
Query: 125 KGTHNHWKPTSSMKRNSSSEYLYSLLPSETGSIDLQDQSFGSEQLDSDEEPTKSSVSI 182
KGTHNH KP+S+ + + S+ ++ S GS +L Q+DS P SS+S+
Sbjct: 2 KGTHNHPKPSSAKRNSLSASSSLAIPHSNHGSNELP-----HHQMDSVATPENSSISM 160
>TC215297 similar to UP|Q40090 (Q40090) SPF1 protein, partial (33%)
Length = 1298
Score = 77.0 bits (188), Expect = 4e-15
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV KG+ N RSYYKCT+P C V+K VER + D + T Y+G HNH P
Sbjct: 407 DDGYRWRKYGQKVVKGNPNPRSYYKCTFPGCPVRKHVERASQDLRAVITTYEGKHNHDVP 586
Query: 134 TSSMKRNSS 142
+ N+S
Sbjct: 587 AARGSGNNS 613
Score = 69.3 bits (168), Expect = 9e-13
Identities = 38/83 (45%), Positives = 52/83 (61%)
Frame = +2
Query: 100 CTWPNCFVKKKVERTIDGEVIETLYKGTHNHWKPTSSMKRNSSSEYLYSLLPSETGSIDL 159
CT+PNC KKKVER++DG++ E +YKGTHNH KP ++ KRNS S ++ S G I+
Sbjct: 2 CTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQAA-KRNSLSASSLAIPHSNHGGINE 178
Query: 160 QDQSFGSEQLDSDEEPTKSSVSI 182
Q+DS P SS+S+
Sbjct: 179 L-----PHQMDSVATPENSSISM 232
>TC215295 similar to UP|Q94IB4 (Q94IB4) WRKY DNA-binding protein (Fragment),
partial (34%)
Length = 925
Score = 75.1 bits (183), Expect = 2e-14
Identities = 38/83 (45%), Positives = 50/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV KG+ N RSYYKCT P C V+K VER + D + T Y+G HNH P
Sbjct: 64 DDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVP 243
Query: 134 TSSMKRNSSSEYLYSLLPSETGS 156
+ R S S + +P+ +
Sbjct: 244 AA---RGSGSHSVNRPMPNNASN 303
>TC232786 similar to UP|Q947G7 (Q947G7) Thermal hysteresis protein STHP-64,
partial (10%)
Length = 430
Score = 75.1 bits (183), Expect = 2e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 63 QQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVERTIDGEVIET 122
Q+ S +R DGYNW+KY +K KG+E RSYYKCT PNC KK+++++ +G + ++
Sbjct: 84 QEFPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLQQSNNGHITDS 263
Query: 123 LYKGTHNHWKP 133
+ G HNH +P
Sbjct: 264 ICIGQHNHPRP 296
>TC217811 similar to UP|Q39658 (Q39658) SPF1-like DNA-binding protein,
partial (28%)
Length = 1010
Score = 74.7 bits (182), Expect = 2e-14
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV KG+ + RSYYKCT C V+K VER ++D + + T Y+G HNH P
Sbjct: 377 DDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASMDPKAVITTYEGKHNHDVP 556
Query: 134 TS-SMKRNSSSEYLYSLLPSETGSID---LQDQSFGSEQLDSDEEP 175
+ + N++S L P L+D FGS +D+ P
Sbjct: 557 AARNSSHNTASSNSMPLKPHNVVPEKHPLLKDMDFGS----TDQRP 682
>TC207064 similar to UP|Q8W1M6 (Q8W1M6) WRKY-like drought-induced protein,
partial (42%)
Length = 1782
Score = 72.8 bits (177), Expect = 8e-14
Identities = 39/91 (42%), Positives = 54/91 (58%), Gaps = 6/91 (6%)
Frame = +3
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV +G+ N RSYYKCT C V+K VER + D + + T Y+G HNH P
Sbjct: 186 DDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVP 365
Query: 134 TS-----SMKRNSSSEYLYSLLPSETGSIDL 159
T+ M +S+ + P E+ +I L
Sbjct: 366 TARNSCHDMAGPASASGQTRVRPEESDTISL 458
>BF424785
Length = 412
Score = 72.8 bits (177), Expect = 8e-14
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +2
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVERTIDGEVIETL 123
DDGYNW+KY +K KGSE RSYYKCT NC VKKKVER DG + E +
Sbjct: 266 DDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCVVKKKVERAPDGHITEII 412
>TC220597 weakly similar to UP|WR32_ARATH (P59583) Probable WRKY
transcription factor 32 (WRKY DNA-binding protein 32),
partial (13%)
Length = 894
Score = 72.4 bits (176), Expect = 1e-13
Identities = 44/123 (35%), Positives = 57/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 59 SNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVERTIDGE 118
S+G + S R + DGYNW+KY +K K RSYY CT NC KK G
Sbjct: 519 SDGTTLSSVSAVRASASDGYNWRKYGQKQVKNPMGSRSYYICTHSNCCAKKIKFCDHSGH 698
Query: 119 VIETLYKGTHNHWKPTSSMKRNSSSEYLYSLLPSETGSIDLQDQSF--GSEQLDSDEEPT 176
VIE +YK HNH P + S+ L S P E S+ Q S+ S +EP
Sbjct: 699 VIEIVYKSQHNH-DPPHKIDTTKESKLLPSSEPKEESSVPKQSTKVLNNSDPSSSPKEPL 875
Query: 177 KSS 179
+ +
Sbjct: 876 QEA 884
>BM094724 similar to GP|18158619|gb WRKY-like drought-induced protein {Retama
raetam}, partial (28%)
Length = 431
Score = 70.9 bits (172), Expect = 3e-13
Identities = 38/87 (43%), Positives = 49/87 (55%)
Frame = +2
Query: 35 RVEDDVAIEIDGVDNNRNEFQSDYSNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKGSENQ 94
RVE D+ E++ N Q+ + R + DDGYNW+KY +K K SE
Sbjct: 173 RVEGDLD-ELNPRSNITTGLQASQVDNRGSGLTVAAERVSDDGYNWRKYGQKHVKRSEFP 349
Query: 95 RSYYKCTWPNCFVKKKVERTIDGEVIE 121
RSYYKCT PNC VKK ER+ DG++ E
Sbjct: 350 RSYYKCTHPNCEVKKLFERSHDGQITE 430
>TC232344 homologue to UP|WR13_ARATH (Q9SVB7) Probable WRKY transcription
factor 13 (WRKY DNA-binding protein 13), partial (21%)
Length = 421
Score = 70.1 bits (170), Expect = 5e-13
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVERTI-DGEVIETLYKGTHNHWKP 133
DDGY W+KY +KV K +++ RSYY+CT NC VKK+VER D ++ T Y+G H H P
Sbjct: 3 DDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVH-SP 179
Query: 134 TSSMKRNSSSEYLYSLL 150
++ ++ + + L + L
Sbjct: 180 SNELEDSQTPSELSNFL 230
>TC221320 similar to UP|Q6IEM2 (Q6IEM2) WRKY transcription factor 59, partial
(33%)
Length = 643
Score = 70.1 bits (170), Expect = 5e-13
Identities = 38/103 (36%), Positives = 53/103 (50%), Gaps = 11/103 (10%)
Frame = +1
Query: 45 DGVDNNRNEFQSDYSNGRQQNKSSVRRMNH----------DDGYNWKKYEEKVAKGSENQ 94
D +N N +NG ++ K V +M DDGY W+KY +K K + N
Sbjct: 247 DATFSNTNMHIKCENNGIKRKKEEVSQMITFRTRSQLEVMDDGYKWRKYGKKTVKNNPNP 426
Query: 95 RSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKPTSS 136
R+YYKC+ C VKK+VER D + T Y G HNH P+++
Sbjct: 427 RNYYKCSGEGCNVKKRVERDRDDSNYVLTTYDGVHNHESPSTA 555
>TC219365 similar to UP|Q6IEM2 (Q6IEM2) WRKY transcription factor 59, partial
(33%)
Length = 788
Score = 69.7 bits (169), Expect = 7e-13
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 75 DDGYNWKKYEEKVAKGSENQRSYYKCTWPNCFVKKKVER-TIDGEVIETLYKGTHNHWKP 133
DDGY W+KY +K K S N R+YYKC+ C VKK+VER D + T Y G HNH P
Sbjct: 397 DDGYKWRKYGKKTVKSSPNPRNYYKCSGEGCDVKKRVERDRDDSNYVLTTYDGVHNHQTP 576
Query: 134 TSS 136
+++
Sbjct: 577 STA 585
>TC225725 similar to UP|Q9FR29 (Q9FR29) Transcription factor WRKY4, partial
(51%)
Length = 1012
Score = 69.3 bits (168), Expect = 9e-13
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Frame = +2
Query: 31 IGTLRVEDDVAIEIDGVDNNRNEFQSDYSNGRQQNKSSVRRMNHDDGYNWKKYEEKVAKG 90
+G + + + + + + ++ S + ++S + + DGY W+KY +KV +
Sbjct: 296 MGVNGTSESSSTDEESCKKQKEDIKTKISRVYMRTEASDKSLIVKDGYQWRKYGQKVTRD 475
Query: 91 SENQRSYYKCTW-PNCFVKKKVERTIDGE-VIETLYKGTHNHWKP------TSSMKRNSS 142
+ + R+Y+KC++ P+C VKKKV+R++D + V+ Y+G HNH P T S + S
Sbjct: 476 NPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHTHPSQMEVTTGSNRSVSC 655
Query: 143 SEYLYSLLPSET 154
S L S P+ T
Sbjct: 656 SASLSSSAPTVT 691
>TC218971 similar to UP|Q9XJ26 (Q9XJ26) NtWRKY1, partial (11%)
Length = 422
Score = 68.2 bits (165), Expect = 2e-12
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = +2
Query: 85 EKVAKGSENQRSYYKCTWPNCFVKKKVERTIDGEVIETLYKGTHNHWKP 133
+K KGSE RSYYKCT PNC VKKKVER+++G V +YKG HNH P
Sbjct: 2 QKQVKGSEFPRSYYKCTNPNCPVKKKVERSLEGHVTAIIYKGEHNHQCP 148
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,913,331
Number of Sequences: 63676
Number of extensions: 102622
Number of successful extensions: 662
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of query: 182
length of database: 12,639,632
effective HSP length: 91
effective length of query: 91
effective length of database: 6,845,116
effective search space: 622905556
effective search space used: 622905556
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Medicago: description of AC138012.5