TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137994.3 - phase: 0 
         (155 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC221271 weakly similar to PIR|T00552|T00552 lysophospholipase h...    27  3.0
TC211175 weakly similar to UP|Q9LIE8 (Q9LIE8) Similarity to cell...    27  5.2
AI442341                                                               26  6.7

>TC221271 weakly similar to PIR|T00552|T00552 lysophospholipase homolog
           F12L6.8 - Arabidopsis thaliana {Arabidopsis thaliana;} ,
           partial (15%)
          Length = 680

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 75  FTAQIRPHLEEKEWTKIFLKTLDQFY 100
           FT +I PHLE+    + +L+ L+ FY
Sbjct: 83  FTLKIHPHLEKISLNQEYLRPLNSFY 160


>TC211175 weakly similar to UP|Q9LIE8 (Q9LIE8) Similarity to cell wall-plasma
           membrane linker protein, partial (3%)
          Length = 609

 Score = 26.6 bits (57), Expect = 5.2
 Identities = 15/46 (32%), Positives = 23/46 (49%)
 Frame = +1

Query: 9   TPLSSGEVFRPVVSEVQAPFVQQTTPIPQTGLPFPQAAMTYSSPLT 54
           +P +      PV S V AP V +  P P++    P +A+   SP+T
Sbjct: 397 SPATPPPTVAPVSSPVGAPPVAEA-PTPESSTGIPSSAVPAGSPIT 531


>AI442341 
          Length = 410

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +2

Query: 27  PFVQQTTPIPQTGLPFPQAAMTYSSPLTQNDKESFKTYFKAYAQWWRDFTAQIRPHLEEK 86
           P  ++ +P P  GLP PQAA+  +       K    T          D  A +RPH E +
Sbjct: 74  PLSRRHSPSPLAGLPSPQAALHSNRRRRLRPKHHHPTADV-------DHRAVLRPHKEPE 232

Query: 87  E 87
           +
Sbjct: 233 Q 235


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.316    0.131    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,226,328
Number of Sequences: 63676
Number of extensions: 70227
Number of successful extensions: 386
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of query: 155
length of database: 12,639,632
effective HSP length: 89
effective length of query: 66
effective length of database: 6,972,468
effective search space: 460182888
effective search space used: 460182888
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)