Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137823.5 - phase: 0 
         (121 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC228736 similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome c...    45  4e-06
TC210152 similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome c...    42  5e-05
TC220000 weakly similar to UP|O95199 (O95199) RCC1-like G exchan...    40  2e-04
TC228737 similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome c...    39  4e-04
TC207754 similar to UP|Q9LFS0 (Q9LFS0) UVB-resistance protein-li...    38  8e-04
TC220459 similar to UP|Q9FXI6 (Q9FXI6) F6F9.7 protein, partial (...    37  0.001
TC206595 similar to UP|Q9FN03 (Q9FN03) UVB-resistance protein UV...    36  0.003
TC220610 similar to UP|Q9FJG9 (Q9FJG9) Similarity to regulator o...    34  0.008
BM108231                                                               33  0.019
CA852073 similar to GP|9757959|db TMV resistance protein-like {A...    33  0.019
TC228290 weakly similar to UP|Q9M2S1 (Q9M2S1) Regulator of chrom...    33  0.024
BM309335                                                               32  0.032
AW200817                                                               32  0.032
BQ080005                                                               32  0.054
TC207753 similar to UP|Q9LFS0 (Q9LFS0) UVB-resistance protein-li...    31  0.070
TC207552                                                               30  0.12
AW733326 weakly similar to GP|26450138|db regulator of chromosom...    30  0.16
TC212117                                                               29  0.35
TC215308 similar to GB|AAP37804.1|30725564|BT008445 At2g15890 {A...    28  0.46
TC213610 similar to UP|Q8W111 (Q8W111) At1g76950/F22K20_5, parti...    28  0.46

>TC228736 similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome
           condensation-like protein, partial (29%)
          Length = 885

 Score = 45.4 bits (106), Expect = 4e-06
 Identities = 26/65 (40%), Positives = 34/65 (52%)
 Frame = +1

Query: 23  IYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGL 82
           +Y +G NQ GQ G     DQ     +  P+L  CP+  N     I+CG  HTA IA +G 
Sbjct: 121 VYAFGGNQFGQLGTG--GDQA----ETIPRLLDCPSLENVNVKRISCGARHTALIADNGK 282

Query: 83  LFTWG 87
           +F WG
Sbjct: 283 VFCWG 297



 Score = 30.0 bits (66), Expect = 0.16
 Identities = 20/64 (31%), Positives = 32/64 (49%)
 Frame = +1

Query: 15  ASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHT 74
           A I     ++ WG+N+ GQ G  +  D+  IP ++   + GC A       ++ACG  HT
Sbjct: 259 ALIADNGKVFCWGWNKYGQLGLGDVIDR-NIPSEV--TIEGCVA------KNVACGWWHT 411

Query: 75  AAIA 78
             +A
Sbjct: 412 LLLA 423


>TC210152 similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome
          condensation-like protein, partial (21%)
          Length = 792

 Score = 41.6 bits (96), Expect = 5e-05
 Identities = 24/65 (36%), Positives = 33/65 (49%)
 Frame = +2

Query: 23 IYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGL 82
          +Y +G NQ GQ G     DQ     +  P+L   P+  N R  +I+CG  HTA +   G 
Sbjct: 14 VYAFGENQFGQLGTGA--DQA----ETLPRLLDSPSLDNLRAKNISCGARHTALVTEGGK 175

Query: 83 LFTWG 87
          +F WG
Sbjct: 176VFCWG 190



 Score = 27.3 bits (59), Expect = 1.0
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +2

Query: 15  ASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHT 74
           A +     ++ WG+N+ GQ G  +  D+  IP ++   + GC         ++ACG  HT
Sbjct: 152 ALVTEGGKVFCWGWNKYGQLGLGDVIDR-NIPSEV--IIEGCAP------KNVACGWWHT 304

Query: 75  AAIA 78
             +A
Sbjct: 305 LLLA 316


>TC220000 weakly similar to UP|O95199 (O95199) RCC1-like G exchanging factor
           RLG (Chromosome condensation 1-like), partial (6%)
          Length = 985

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 23/68 (33%), Positives = 31/68 (44%)
 Frame = +1

Query: 20  KSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIAS 79
           +S  Y WG    GQ G           K+L P+      G+  +  D+ACG  HT A+  
Sbjct: 52  ESGSYTWGLGNMGQLGHSSLQYG---DKELLPRRVVTLDGIFIK--DVACGGVHTCALTQ 216

Query: 80  DGLLFTWG 87
            G L+TWG
Sbjct: 217 GGALYTWG 240



 Score = 36.2 bits (82), Expect = 0.002
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
 Frame = +1

Query: 16  SIPRKSAIYVWGYNQSGQTGRKEK--------DDQLRIPKQLPPQLFGCPAGLNTRWLDI 67
           ++ +  A+Y WG  QSGQ G   +        +D     + +P  +   P G+      +
Sbjct: 205 ALTQGGALYTWGGGQSGQLGLGPQTGLFSCVANDSQTFFRNIP--VLVVPKGVQL----V 366

Query: 68  ACGREHTAAIASDGLLFTWG 87
           ACG  HT    SDG +  WG
Sbjct: 367 ACGHSHTLISMSDGRIHGWG 426


>TC228737 similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome
           condensation-like protein, partial (21%)
          Length = 802

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +2

Query: 51  PQLFGCPAGLNTRWLDIACGREHTAAIASDGLLFTWG 87
           P+L  CP+  N     I+CG  HTA I  +G +F WG
Sbjct: 74  PRLLDCPSLENVNVXRISCGARHTALITDNGKVFCWG 184



 Score = 30.0 bits (66), Expect = 0.16
 Identities = 20/64 (31%), Positives = 32/64 (49%)
 Frame = +2

Query: 15  ASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHT 74
           A I     ++ WG+N+ GQ G  +  D+  IP ++   + GC A       ++ACG  HT
Sbjct: 146 ALITDNGKVFCWGWNKYGQLGLGDVIDR-NIPSEV--TIEGCVA------KNVACGWWHT 298

Query: 75  AAIA 78
             +A
Sbjct: 299 LLLA 310


>TC207754 similar to UP|Q9LFS0 (Q9LFS0) UVB-resistance protein-like, partial
           (56%)
          Length = 778

 Score = 37.7 bits (86), Expect = 8e-04
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = +3

Query: 6   ILGTTKPVAASIPRKSAIYVWGYNQSGQTG--RKEKDDQLRIPKQLPPQLFGCPAGLNTR 63
           +L  +  V   +   S I  WG  + GQ G    E+ + + + K L P           R
Sbjct: 30  LLSFSSAVPTFMDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKALQPH----------R 179

Query: 64  WLDIACGREHTAAIASDGLLFTWG 87
              +  G  ++ AIA DG LFTWG
Sbjct: 180 IRSVVAGSRNSLAIADDGKLFTWG 251



 Score = 28.1 bits (61), Expect = 0.60
 Identities = 15/65 (23%), Positives = 26/65 (39%)
 Frame = +3

Query: 23  IYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGL 82
           ++ WG+NQ    G   +       +  P Q+    A  + + +  A G  H  A+   G 
Sbjct: 237 LFTWGWNQRATLGHPAETKSENKTENTPSQV---KALSSVKIVQAAIGGWHCLAVDDQGR 407

Query: 83  LFTWG 87
            + WG
Sbjct: 408 AYAWG 422


>TC220459 similar to UP|Q9FXI6 (Q9FXI6) F6F9.7 protein, partial (24%)
          Length = 846

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 20/67 (29%), Positives = 30/67 (43%), Gaps = 6/67 (8%)
 Frame = +1

Query: 27 GYNQSGQTGR------KEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASD 80
          G  Q GQ G         KD  +R+  +  P+     A      + +ACG  HT A+  +
Sbjct: 7  GLPQYGQLGHGTDNEYNSKDSSVRLVYEPQPRPRAIAALAGEAIVKVACGTNHTVAVDKN 186

Query: 81 GLLFTWG 87
          G ++TWG
Sbjct: 187GFVYTWG 207


>TC206595 similar to UP|Q9FN03 (Q9FN03) UVB-resistance protein UVR8
           (AT5g63860/MGI19_6), partial (46%)
          Length = 974

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +2

Query: 23  IYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGL 82
           +Y WG+N+ GQ G  +  D     +   PQ        + + + I+CG  HT A+     
Sbjct: 263 LYGWGWNKFGQVGVGDNVDHCSPVQVKFPQ--------DQKVVQISCGWRHTIAVTEKEN 418

Query: 83  LFTWG 87
           +F+WG
Sbjct: 419 VFSWG 433



 Score = 34.7 bits (78), Expect = 0.006
 Identities = 20/73 (27%), Positives = 38/73 (51%), Gaps = 1/73 (1%)
 Frame = +2

Query: 16  SIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLD-IACGREHT 74
           S+     +Y +G+++ GQ G    +D L +P++L          L+ + +  ++ G  H+
Sbjct: 86  SVSSSGGLYTYGWSKYGQLGHGNFEDSL-VPQKLQ--------ALSDKLISQVSGGWRHS 238

Query: 75  AAIASDGLLFTWG 87
            A+ S GLL+ WG
Sbjct: 239 MALTSTGLLYGWG 277



 Score = 28.5 bits (62), Expect = 0.46
 Identities = 10/21 (47%), Positives = 16/21 (75%)
 Frame = +2

Query: 67 IACGREHTAAIASDGLLFTWG 87
          +ACG  HT +++S G L+T+G
Sbjct: 59 VACGWRHTISVSSSGGLYTYG 121



 Score = 25.4 bits (54), Expect = 3.9
 Identities = 10/15 (66%), Positives = 12/15 (79%)
 Frame = -2

Query: 85  TWGLDFSYSLLVLLI 99
           TWGLDF + LL L+I
Sbjct: 964 TWGLDFLFKLLSLVI 920


>TC220610 similar to UP|Q9FJG9 (Q9FJG9) Similarity to regulator of chromosome
           condensation, partial (59%)
          Length = 1086

 Score = 34.3 bits (77), Expect = 0.008
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
 Frame = +3

Query: 8   GTTKPVA------ASIPRKSAIYVWGYNQSGQTGRKEKDDQLRI-PKQLPPQLFGCPAGL 60
           GT K +A      A+I     +Y+WG        R E D +L + P + P    G     
Sbjct: 111 GTIKHIATSGTHTAAITESGELYIWG--------RDEGDGRLGLGPGRGPDHAGGLSIPS 266

Query: 61  NTRWLD-----IACGREHTAAIASDGLLFTWGLDFSYSL 94
             + L      ++CG   T A+  DG L+ WG + +Y L
Sbjct: 267 KVKELPYPIAAVSCGGFFTMALTVDGQLWNWGANSNYEL 383



 Score = 30.0 bits (66), Expect = 0.16
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 26  WGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGLLFT 85
           WG+   GQ G     +Q +IP  +        A  +   + I+CG   +AA+  +G L+ 
Sbjct: 513 WGHGGQGQLGHGSIQNQ-KIPAVVE-------ALAHENIIYISCGGSSSAAVTDNGKLYM 668

Query: 86  WG 87
           WG
Sbjct: 669 WG 674


>BM108231 
          Length = 493

 Score = 33.1 bits (74), Expect = 0.019
 Identities = 27/94 (28%), Positives = 40/94 (41%), Gaps = 9/94 (9%)
 Frame = +2

Query: 3   IDAILGTTKPVAA-------SIPRKSAIYVWG--YNQSGQTGRKEKDDQLRIPKQLPPQL 53
           ++A+  TT    A       ++     +Y WG   + +G  G    D    IPK++   L
Sbjct: 86  VEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGS-DVSHWIPKRIAGPL 262

Query: 54  FGCPAGLNTRWLDIACGREHTAAIASDGLLFTWG 87
            G           +ACG  HTA + S G LFT+G
Sbjct: 263 EGLQIAF------VACGPWHTALVTSTGQLFTFG 346


>CA852073 similar to GP|9757959|db TMV resistance protein-like {Arabidopsis
           thaliana}, partial (18%)
          Length = 855

 Score = 33.1 bits (74), Expect = 0.019
 Identities = 27/94 (28%), Positives = 40/94 (41%), Gaps = 9/94 (9%)
 Frame = +3

Query: 3   IDAILGTTKPVAA-------SIPRKSAIYVWG--YNQSGQTGRKEKDDQLRIPKQLPPQL 53
           ++A+  TT    A       ++     +Y WG   + +G  G    D    IPK++   L
Sbjct: 261 VEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGS-DVSHWIPKRIAGPL 437

Query: 54  FGCPAGLNTRWLDIACGREHTAAIASDGLLFTWG 87
            G           +ACG  HTA + S G LFT+G
Sbjct: 438 EGLQIAF------VACGPWHTALVTSTGQLFTFG 521



 Score = 28.5 bits (62), Expect = 0.46
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 67  IACGREHTAAIASDGLLFTWG 87
           IACG  H + +   G +FTWG
Sbjct: 138 IACGVRHASLVTRQGEVFTWG 200


>TC228290 weakly similar to UP|Q9M2S1 (Q9M2S1) Regulator of chromosome
          condensation-like protein, partial (13%)
          Length = 675

 Score = 32.7 bits (73), Expect = 0.024
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 67 IACGREHTAAIASDGLLFTWG 87
          ++CG  H+A +  DG LFTWG
Sbjct: 70 VSCGARHSALLTDDGHLFTWG 132



 Score = 29.3 bits (64), Expect = 0.27
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +1

Query: 23  IYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHT 74
           ++ WG+N+ GQ G  +  D+  IP Q+   + GC      R  ++ACG  HT
Sbjct: 118 LFTWGWNKYGQLGLGDSVDR-NIPGQV--SIAGC------RPRNVACGWWHT 246


>BM309335 
          Length = 428

 Score = 32.3 bits (72), Expect = 0.032
 Identities = 10/21 (47%), Positives = 15/21 (70%)
 Frame = +1

Query: 67 IACGREHTAAIASDGLLFTWG 87
          +ACG  HT A+  +G ++TWG
Sbjct: 67 VACGTNHTVAVDKNGFVYTWG 129


>AW200817 
          Length = 428

 Score = 32.3 bits (72), Expect = 0.032
 Identities = 14/46 (30%), Positives = 25/46 (53%)
 Frame = +3

Query: 11  KPVAASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGC 56
           +PV  S+   S      Y  S   GRK +++ ++  ++LPP++ GC
Sbjct: 219 RPVLVSVSAISDDNSHSYTSSSSNGRKLEEESIKGGQELPPEIAGC 356


>BQ080005 
          Length = 415

 Score = 31.6 bits (70), Expect = 0.054
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 25  VWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGLLF 84
           +WG    G+ G    D Q +      P +  CPA  N     IACG  HT  +  DG ++
Sbjct: 250 LWGNGDYGRLGLGNLDSQWK------PVV--CPAFRNKTLNAIACGGAHTLFLTEDGCVY 405

Query: 85  TWG 87
             G
Sbjct: 406 ATG 414


>TC207753 similar to UP|Q9LFS0 (Q9LFS0) UVB-resistance protein-like,
          partial (42%)
          Length = 791

 Score = 31.2 bits (69), Expect = 0.070
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = +1

Query: 23 IYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIASDGL 82
          ++ WG N+ GQ    +       P+  P ++ G     +   +DIA G  H+ A+  +G 
Sbjct: 16 LWAWGNNEYGQXXTGDTQ-----PRSQPIRVQGLS---DLTLVDIAAGGWHSTALTDEGE 171

Query: 83 LFTWG 87
          ++ WG
Sbjct: 172VYGWG 186



 Score = 27.3 bits (59), Expect = 1.0
 Identities = 17/69 (24%), Positives = 28/69 (39%), Gaps = 5/69 (7%)
 Frame = +1

Query: 14  AASIPRKSAIYVWGYNQSGQTGRKEK---DDQLRIPKQLPPQLFGCPAGLNTRWLD--IA 68
           + ++ R   ++ +G    G+ G   K      + +P  LPP            W+   +A
Sbjct: 307 SVALTRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVA 486

Query: 69  CGREHTAAI 77
           CG  HT AI
Sbjct: 487 CGGRHTLAI 513


>TC207552 
          Length = 1797

 Score = 30.4 bits (67), Expect = 0.12
 Identities = 18/79 (22%), Positives = 35/79 (43%)
 Frame = +3

Query: 16  SIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTA 75
           S+     +Y +G   +   G  E+ D+L+      P+            + ++ G EH  
Sbjct: 924 SVTENGTVYSFGSGANFCLGHGEQHDELQ------PRAIQKFRRKGIHIVRVSAGDEHAV 1085

Query: 76  AIASDGLLFTWGLDFSYSL 94
           A+ S+G ++TWG  +  +L
Sbjct: 1086ALDSNGYVYTWGKGYCGAL 1142


>AW733326 weakly similar to GP|26450138|db regulator of chromosome
           condensation like {Arabidopsis thaliana}, partial (22%)
          Length = 420

 Score = 30.0 bits (66), Expect = 0.16
 Identities = 19/78 (24%), Positives = 36/78 (45%)
 Frame = +1

Query: 10  TKPVAASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIAC 69
           T P+ +  P  S +       + +   +  + +  +P    P+L     G++   LDIAC
Sbjct: 46  TSPLESESPNNSQLSTSDLEAAEKRVLQGIEQENNMPIVWEPRLVEELRGVHV--LDIAC 219

Query: 70  GREHTAAIASDGLLFTWG 87
           G +H+  +  DG+L + G
Sbjct: 220 GLDHSLVLCRDGVLLSCG 273


>TC212117 
          Length = 742

 Score = 28.9 bits (63), Expect = 0.35
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +1

Query: 13  VAASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLD-IACGR 71
           +  ++     +Y  G    GQ G  + D +L I  +           L+  +++ IACG 
Sbjct: 49  LTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVE---------GKLSESFVEEIACGA 201

Query: 72  EHTAAIASDGLLFTWG 87
            H A + S   ++TWG
Sbjct: 202 YHVAVLTSRTEVYTWG 249



 Score = 27.7 bits (60), Expect = 0.78
 Identities = 18/63 (28%), Positives = 28/63 (43%)
 Frame = +1

Query: 15  ASIPRKSAIYVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHT 74
           A +  ++ +Y WG   +G+ G  + DD      +  P L       + +   IACG   T
Sbjct: 211 AVLTSRTEVYTWGKGANGRLGHGDTDD------RNTPTLVEALKDKDVK--SIACGTNFT 366

Query: 75  AAI 77
           AAI
Sbjct: 367 AAI 375


>TC215308 similar to GB|AAP37804.1|30725564|BT008445 At2g15890 {Arabidopsis
           thaliana;} , partial (64%)
          Length = 1001

 Score = 28.5 bits (62), Expect = 0.46
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 84  FTWGLDFSYSLLVLLIVHDFIYSFKNCFIVLELFFYDT 121
           FTWG  +SYS ++LL+    IYSF    + + +  + +
Sbjct: 842 FTWGY-YSYSTMLLLVPSKRIYSFPLSLVCMGIIIHQS 732


>TC213610 similar to UP|Q8W111 (Q8W111) At1g76950/F22K20_5, partial (13%)
          Length = 436

 Score = 28.5 bits (62), Expect = 0.46
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 66  DIACGREHTAAIASDGLLFTWG 87
           +IACG  H A + S   ++TWG
Sbjct: 355 EIACGAYHVAVLTSKNEVYTWG 420



 Score = 26.6 bits (57), Expect = 1.7
 Identities = 14/32 (43%), Positives = 16/32 (49%), Gaps = 11/32 (34%)
 Frame = +3

Query: 67 IACGREHTAAIA-----------SDGLLFTWG 87
          +ACG  HTAA+            S G LFTWG
Sbjct: 12 VACGVCHTAAVVEVIATHSSTSISSGKLFTWG 107


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.326    0.143    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,465,029
Number of Sequences: 63676
Number of extensions: 94403
Number of successful extensions: 749
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of query: 121
length of database: 12,639,632
effective HSP length: 97
effective length of query: 24
effective length of database: 6,463,060
effective search space: 155113440
effective search space used: 155113440
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)


Medicago: description of AC137823.5