TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137702.3 - phase: 2 /pseudo
         (899 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC231883 weakly similar to UP|Q7QBQ3 (Q7QBQ3) AgCP4056 (Fragment...   107  2e-23
CD402931 similar to GP|9081793|dbj P0489A01.23 {Oryza sativa (ja...   102  7e-22
TC213121                                                               91  2e-18
TC205614                                                               56  6e-08
TC217295 similar to UP|Q8SKU2 (Q8SKU2) Tic62 protein precursor, ...    32  0.95
TC231980 similar to UP|Q8S562 (Q8S562) KAP-2, partial (19%)            32  1.2
TC228291 homologue to UP|Q9FXT8 (Q9FXT8) 26S proteasome regulato...    31  2.1
TC216978 homologue to UP|Q8RXH5 (Q8RXH5) Osmotic stress-activate...    31  2.8
TC213353                                                               30  3.6
TC216826 similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein (At2g46...    30  3.6
TC214248 similar to UP|Q9FMJ2 (Q9FMJ2) Ankyrin-like protein, par...    29  8.1

>TC231883 weakly similar to UP|Q7QBQ3 (Q7QBQ3) AgCP4056 (Fragment), partial
            (17%)
          Length = 1263

 Score =  107 bits (268), Expect = 2e-23
 Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 7/110 (6%)
 Frame = +1

Query: 297  LHPN-------QIDKIISAEIPDKNRDPKLYEIVASLMIHGPCGPQNKSSPCILIKKCTK 349
            LHP+       +ID IISAEIP    DP+LY +V + M+HGPCG     SPC+   KC++
Sbjct: 934  LHPDNQYPSSDEIDHIISAEIPSHEDDPELYTLVQNHMVHGPCGILQSHSPCMKEGKCSR 1113

Query: 350  YFPKKFVDNTVIDSDGYPVYRRRDNGVFIKKKGESFVDNRWVVPYNRKLM 399
            ++PK F+ NT++D +GY VYRRR++G  I  K    VDNR++VPYN KL+
Sbjct: 1114 FYPKIFLPNTLLDLNGYLVYRRRNDGRTI-LKNSVIVDNRYLVPYNAKLL 1260


>CD402931 similar to GP|9081793|dbj P0489A01.23 {Oryza sativa (japonica
           cultivar-group)}, partial (5%)
          Length = 617

 Score =  102 bits (254), Expect = 7e-22
 Identities = 51/103 (49%), Positives = 73/103 (70%)
 Frame = +2

Query: 764 GTGKTFILRALSSAVRSRKEIVLTVASSGIAALLIPGGRTAHSRFGIPIIVDEISTCGIH 823
           GT KTF+ + LS+ +RS K ++ +     +A+LL+P G TAHS F IP+++ + STC I+
Sbjct: 11  GTSKTFLWKTLSAGMRS-KGLMSSSCLKRLASLLLPRG*TAHSTFSIPLVIKDDSTCNIN 187

Query: 824 PKSPLAKLVCKAKLIIWDEAPMMHKHCFEALDRSLRDILRVQN 866
             S  +KL+   KLIIWDE P+M+K CFEALDR+L+DI+  QN
Sbjct: 188 QGSARSKLLLHTKLIIWDETPVMNKFCFEALDRTLQDIMASQN 316


>TC213121 
          Length = 713

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 43/109 (39%), Positives = 70/109 (63%)
 Frame = +2

Query: 692 DYPTMPRTDISLIHESRNRLIYDELNYNQQLLEIEHKKLMSTMTAEQKNVYEKIISRVDD 751
           ++P M      +++   N+LIY+EL Y++ +L     +   ++T E  +++ KI+  +  
Sbjct: 284 NFPLMSYPIGYIVNPYGNKLIYNELAYDKDILAA*FSRCYHSLTDEHASIFNKIMHMIAT 463

Query: 752 NLPGIFFLYGYGGTGKTFILRALSSAVRSRKEIVLTVASSGIAALLIPG 800
              G++FLYGYGGTGKTF+ + LSS + S   IVLT+ASSGI ++L+PG
Sbjct: 464 QSGGVYFLYGYGGTGKTFVWKTLSSTIHSNSGIVLTMASSGILSMLLPG 610



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 27/77 (35%), Positives = 45/77 (58%)
 Frame = +3

Query: 452 CRYLSACEAVWRIFSFDINYREPSVERLNFHLEGEEPVVFEDHEDIADVIKKPHIRDTKF 511
           C Y+S  E   +I +F ++ R P+VE L FHLE + P   ++ + I  ++ K  I+++ F
Sbjct: 30  CIYVSPPETC*KISAFPMHGRAPTVECLYFHLENQ*P--*KESQQIGSMLSKSTIKESIF 203

Query: 512 IAWFEANQKYPEARDLT 528
            A  ++N+ Y   RDLT
Sbjct: 204 TACMDSNKMYHHGRDLT 254


>TC205614 
          Length = 742

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 27/41 (65%), Positives = 30/41 (72%), Gaps = 1/41 (2%)
 Frame = +2

Query: 448 MYY-DCRYLSACEAVWRIFSFDINYREPSVERLNFHLEGEE 487
           MYY DC+Y+S CEA WRIFSF I  R P VERL FHL  E+
Sbjct: 617 MYYLDCQYISPCEACWRIFSFQIYGRIPIVERLYFHLPNEQ 739


>TC217295 similar to UP|Q8SKU2 (Q8SKU2) Tic62 protein precursor, partial
           (21%)
          Length = 609

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 652 TWQNLSDDMLHRQRRASQLKNYTLAEIDRLLRSH 685
           TW+ LS D+LH+++ AS L    L+E   LL +H
Sbjct: 156 TWEALSQDILHKEKEASPL*MTMLSESRHLLPAH 55


>TC231980 similar to UP|Q8S562 (Q8S562) KAP-2, partial (19%)
          Length = 590

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -3

Query: 634 VQLLVTNQFAQPEVVWSKTWQNLSDDMLHRQRRAS 668
           V LL+T   ++ E VW +TW  ++DD+++  +++S
Sbjct: 588 VLLLLTATXSKSEQVWDQTWHWMADDIVYNYKKSS 484


>TC228291 homologue to UP|Q9FXT8 (Q9FXT8) 26S proteasome regulatory particle
           triple-A ATPase subunit4, partial (62%)
          Length = 1079

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
 Frame = +3

Query: 744 KIISRVDDNLPGIFFLYGYGGTGKTFILRALSSAVRSRKEIVLTVASSGIAALLIPGGRT 803
           ++  RV    P    LYG  GTGKT + RA++S + +    +  V+S+ I   +    R 
Sbjct: 48  ELFIRVGIKPPKGVLLYGPPGTGKTLLARAIASNIEA--NFLKVVSSAIIDKYIGESARL 221

Query: 804 AHSRFGIP-------IIVDEISTCG 821
               FG         I +DEI   G
Sbjct: 222 IREMFGYARDHQPCIIFMDEIDAIG 296


>TC216978 homologue to UP|Q8RXH5 (Q8RXH5) Osmotic stress-activated protein
           kinase, partial (96%)
          Length = 1626

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/31 (45%), Positives = 18/31 (57%)
 Frame = -1

Query: 75  ITMPPTSKAYFRVRNILFAIAIPFNLFKGRR 105
           I +P TS  Y   RNIL  +  PFN+F G +
Sbjct: 531 IRVPKTSMVYDFPRNILINLVTPFNVFHGNK 439


>TC213353 
          Length = 392

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -1

Query: 758 FLYGYGGTGKTFILRALSSAVRSRKEIVLTVASSG 792
           +L  YG  GK+ ILR  +S  RSR+E V + A SG
Sbjct: 263 YLVSYGSQGKSSILR--TSRSRSRRESVTSAAGSG 165


>TC216826 similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein
           (At2g46500/F11C10.19), partial (39%)
          Length = 850

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/62 (33%), Positives = 33/62 (52%)
 Frame = -2

Query: 769 FILRALSSAVRSRKEIVLTVASSGIAALLIPGGRTAHSRFGIPIIVDEISTCGIHPKSPL 828
           F  RAL+ + R RK ++   ASS +A  L+PG   + +   I  I D +    +H + P+
Sbjct: 747 FYKRALTISSR-RKSMIWETASSNVA-SLVPGRTESSAACTISSITDSLFKDSLHIRLPM 574

Query: 829 AK 830
           AK
Sbjct: 573 AK 568


>TC214248 similar to UP|Q9FMJ2 (Q9FMJ2) Ankyrin-like protein, partial (60%)
          Length = 1596

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 657  SDDMLHRQRRASQLKNY-----TLAEIDRLLRSHGKSMKED 692
            S D+LH     S +KN       +AEIDR+LR  GK +  D
Sbjct: 1131 SYDLLHADNLFSNIKNRCNLKAVVAEIDRILRPEGKLIVRD 1253


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.335    0.146    0.476 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,503,039
Number of Sequences: 63676
Number of extensions: 647275
Number of successful extensions: 4651
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4649
length of query: 899
length of database: 12,639,632
effective HSP length: 106
effective length of query: 793
effective length of database: 5,889,976
effective search space: 4670750968
effective search space used: 4670750968
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 63 (28.9 bits)