BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137702.2 + phase: 0
(257 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227194 similar to UP|Q8T5S8 (Q8T5S8) Prolyl 4-hydroxylase alph... 292 1e-79
TC232158 284 2e-78
TC228929 278 2e-75
TC216902 similar to UP|Q8LAN3 (Q8LAN3) Prolyl 4-hydroxylase alph... 212 2e-55
TC219496 187 3e-48
TC227193 similar to UP|Q9FKX6 (Q9FKX6) Prolyl 4-hydroxylase, alp... 160 7e-40
TC219497 150 5e-37
TC229833 114 4e-26
AW472148 110 6e-25
TC222832 similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, par... 109 1e-24
TC222216 similar to UP|Q9LSI6 (Q9LSI6) Prolyl 4-hydroxylase alph... 100 9e-22
TC216629 weakly similar to UP|Q8H0X2 (Q8H0X2) Expressed protein ... 91 4e-19
BM521712 similar to GP|21618073|gb| prolyl 4-hydroxylase alpha s... 86 1e-17
BE822836 84 6e-17
TC227195 77 6e-15
TC222148 weakly similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxyla... 72 3e-13
BI971299 70 7e-13
BE823168 67 8e-12
TC222092 similar to UP|Q8VZD7 (Q8VZD7) AT3g28480/MFJ20_16, parti... 63 1e-10
TC234894 weakly similar to UP|ELK3_HUMAN (P41970) ETS-domain pro... 56 2e-08
>TC227194 similar to UP|Q8T5S8 (Q8T5S8) Prolyl 4-hydroxylase alpha-related
protein PH4[alpha]PV (CG31015-PA), partial (4%)
Length = 965
Score = 292 bits (747), Expect = 1e-79
Identities = 135/169 (79%), Positives = 158/169 (92%)
Frame = +1
Query: 89 ECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKIIQNIERRIADFTFI 148
ECE+LI++AKP + KS+VVDS+TGKS +SRVRTSSG FL RG+DKI+++IE+RIA ++FI
Sbjct: 1 ECEYLIDIAKPSMHKSTVVDSETGKSKDSRVRTSSGTFLARGRDKIVRDIEKRIAHYSFI 180
Query: 149 PVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAA 208
PVE+GEGLQVLHY VG+KYEPHYDYFLD+FNTKNGGQR+ATVLMYL+DVEEGGETVFPAA
Sbjct: 181 PVEHGEGLQVLHYEVGQKYEPHYDYFLDDFNTKNGGQRIATVLMYLTDVEEGGETVFPAA 360
Query: 209 KANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLDASSLHG 257
K NFSSVPWWN+LSEC +KGLS+KPK GDALLFWSM+PDATLD SSLHG
Sbjct: 361 KGNFSSVPWWNELSECGKKGLSIKPKRGDALLFWSMKPDATLDPSSLHG 507
>TC232158
Length = 904
Score = 284 bits (727), Expect(2) = 2e-78
Identities = 126/184 (68%), Positives = 161/184 (87%)
Frame = +2
Query: 73 SWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGKD 132
SW+P AF+YHNFL+KEECE+LIN+A P + KS+V D+++G+S VR S+G FL RG+D
Sbjct: 215 SWQPTAFLYHNFLTKEECEYLINIATPHMQKSTVADNQSGQSVVHDVRKSTGAFLDRGQD 394
Query: 133 KIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLM 192
+I++NIE+RIAD TFIP+ENGE + V+HY VG+ Y+PHYDYF+D+FN +NGGQR+AT+LM
Sbjct: 395 EIVRNIEKRIADVTFIPIENGEPIYVIHYEVGQYYDPHYDYFIDDFNIENGGQRIATMLM 574
Query: 193 YLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLDA 252
YLS+VEEGGET+FP AKANFSSVPWWN+LS C + GLS+KPKMGDALLFWSM+P+ATLDA
Sbjct: 575 YLSNVEEGGETMFPRAKANFSSVPWWNELSNCGKMGLSIKPKMGDALLFWSMKPNATLDA 754
Query: 253 SSLH 256
+LH
Sbjct: 755 LTLH 766
Score = 25.8 bits (55), Expect(2) = 2e-78
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 18 TLILLTLFMLTLVIIVLLALGILYLPNTTDDSLIT 52
TL+LLT LTL +LLAL IL P+ +S ++
Sbjct: 58 TLLLLTCSFLTL---ILLALHILSTPHANANSSVS 153
>TC228929
Length = 979
Score = 278 bits (711), Expect = 2e-75
Identities = 131/142 (92%), Positives = 138/142 (96%)
Frame = +3
Query: 116 ESRVRTSSGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFL 175
ESRVRTSSGMFLKRG+DKIIQNIE+RIADFTFIP ENGEGLQ+LHY VG+KYEPHYDYFL
Sbjct: 9 ESRVRTSSGMFLKRGRDKIIQNIEKRIADFTFIPEENGEGLQILHYEVGQKYEPHYDYFL 188
Query: 176 DEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKM 235
DEFNTKNGGQR+ATVLMYLSDVEEGGETVFPAA ANFSSVPWWNDLS+CARKGLS+KPKM
Sbjct: 189 DEFNTKNGGQRIATVLMYLSDVEEGGETVFPAANANFSSVPWWNDLSQCARKGLSVKPKM 368
Query: 236 GDALLFWSMRPDATLDASSLHG 257
GDALLFWSMRPDATLD SSLHG
Sbjct: 369 GDALLFWSMRPDATLDPSSLHG 434
>TC216902 similar to UP|Q8LAN3 (Q8LAN3) Prolyl 4-hydroxylase alpha
subunit-like protein, partial (89%)
Length = 1381
Score = 212 bits (539), Expect = 2e-55
Identities = 104/187 (55%), Positives = 139/187 (73%), Gaps = 2/187 (1%)
Frame = +3
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
+SW+PRAFVY FL+ EC+HLI+LAK L +S+V D+ +G+S S VRTSSGMF+ + K
Sbjct: 300 ISWKPRAFVYEGFLTDLECDHLISLAKSELKRSAVADNLSGESQLSDVRTSSGMFISKNK 479
Query: 132 DKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVL 191
D I+ IE +I+ +TF+P ENGE +QVL Y G+KY+PHYDYF D+ N GG R+ATVL
Sbjct: 480 DPIVAGIEDKISSWTFLPKENGEDIQVLRYEHGQKYDPHYDYFTDKVNIARGGHRIATVL 659
Query: 192 MYLSDVEEGGETVFPAAK--ANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDAT 249
MYL+DV +GGETVF +A+ +DLSECA+KG+++KP+ GDALLF+S+ +AT
Sbjct: 660 MYLTDVAKGGETVFXSAEEPPRRRGAETSSDLSECAKKGIAVKPRRGDALLFFSLHTNAT 839
Query: 250 LDASSLH 256
D SSLH
Sbjct: 840 PDTSSLH 860
>TC219496
Length = 910
Score = 187 bits (476), Expect = 3e-48
Identities = 103/195 (52%), Positives = 131/195 (66%), Gaps = 7/195 (3%)
Frame = +1
Query: 70 EILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFL-- 127
E+L+W PR + HNFLS EEC++L LA P L S+VVD+KTGK +S VRTSSGMFL
Sbjct: 139 EVLNWSPRIILLHNFLSMEECDYLRALALPRLHISTVVDTKTGKGIKSDVRTSSGMFLNS 318
Query: 128 KRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRV 187
K K ++Q IE+RI+ ++ IP+ENGE +QVL Y + Y+PH+DYF D FN K GGQR+
Sbjct: 319 KERKYPMVQAIEKRISVYSQIPIENGELMQVLRYEKNQYYKPHHDYFSDTFNLKRGGQRI 498
Query: 188 ATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECA-----RKGLSLKPKMGDALLFW 242
AT+LMYLSD EGGET FP A + EC+ KGLS+KP G+A+LFW
Sbjct: 499 ATMLMYLSDNIEGGETYFPLAGS-----------GECSCGGKLVKGLSVKPIKGNAVLFW 645
Query: 243 SMRPDATLDASSLHG 257
SM D D +S+HG
Sbjct: 646 SMGLDGQSDPNSVHG 690
>TC227193 similar to UP|Q9FKX6 (Q9FKX6) Prolyl 4-hydroxylase, alpha
subunit-like protein, partial (41%)
Length = 557
Score = 160 bits (404), Expect = 7e-40
Identities = 84/161 (52%), Positives = 121/161 (74%), Gaps = 10/161 (6%)
Frame = +1
Query: 1 MAKGKHTHPRSQVKKLSTLILLTLFML-TLVIIVLLALGILYLPNTT-------DDSLIT 52
MAK +++ + S+ ++LTLF++ T ++++LLALGIL +P+++ +D
Sbjct: 73 MAKPRYSRLPPRKSSSSSTLILTLFLVFTFLVLILLALGILSIPSSSRGNLPKPNDLASI 252
Query: 53 DRRKIYESLAE--KKEQWTEILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSK 110
R I+ S + + EQW E++SWEPRAFVYHNFL+KEECE+LI++AKP + KSSVVDS+
Sbjct: 253 ARNTIHTSDDDDVRGEQWVEVVSWEPRAFVYHNFLTKEECEYLIDIAKPNMHKSSVVDSE 432
Query: 111 TGKSTESRVRTSSGMFLKRGKDKIIQNIERRIADFTFIPVE 151
TGKS +SRVRTSSG FL RG+DKI+++IE+RIA ++FIPVE
Sbjct: 433 TGKSKDSRVRTSSGTFLARGRDKIVRDIEKRIAHYSFIPVE 555
>TC219497
Length = 770
Score = 150 bits (379), Expect = 5e-37
Identities = 84/161 (52%), Positives = 108/161 (66%), Gaps = 7/161 (4%)
Frame = +3
Query: 104 SSVVDSKTGKSTESRVRTSSGMFLKRGKDK--IIQNIERRIADFTFIPVENGEGLQVLHY 161
S+VVD+KTGK +S VRTSSGMFL + K ++Q IE+RI+ ++ IP+ENGE +QVL Y
Sbjct: 30 SNVVDTKTGKGIKSDVRTSSGMFLNPQERKYPMVQAIEKRISVYSQIPIENGELMQVLRY 209
Query: 162 GVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDL 221
+ Y+PH+DYF D FN K GGQR+AT+LMYLSD EGGET FP A +
Sbjct: 210 EKNQYYKPHHDYFSDTFNLKRGGQRIATMLMYLSDNIEGGETYFPLAGS----------- 356
Query: 222 SECA-----RKGLSLKPKMGDALLFWSMRPDATLDASSLHG 257
EC+ KGLS+KP G+A+LFWSM D D +S+HG
Sbjct: 357 GECSCGGKLVKGLSVKPIKGNAVLFWSMGLDGQSDPNSVHG 479
>TC229833
Length = 1265
Score = 114 bits (285), Expect = 4e-26
Identities = 71/186 (38%), Positives = 108/186 (57%), Gaps = 1/186 (0%)
Frame = +3
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
+SW+PR F+Y FLS +EC++L++LA KS S G +E V TS M +
Sbjct: 294 ISWQPRVFLYKGFLSDKECDYLVSLAYAVKEKS----SGNGGLSEG-VETSLDM-----E 443
Query: 132 DKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVL 191
D I+ IE R++ + F+P E + LQV+HYG E+ + DYF ++ + G +AT++
Sbjct: 444 DDILARIEERLSVWAFLPKEYSKPLQVMHYG-PEQNGRNLDYFTNKTQLELSGPLMATII 620
Query: 192 MYLS-DVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATL 250
+YLS DV +GG+ +FP SVP + S C+ L+P G+A+LF+S+ P A+
Sbjct: 621 LYLSNDVTQGGQILFP------ESVPGSSSWSSCSNSSNILQPVKGNAILFFSLHPSASP 782
Query: 251 DASSLH 256
D SS H
Sbjct: 783 DKSSFH 800
>AW472148
Length = 391
Score = 110 bits (275), Expect = 6e-25
Identities = 51/128 (39%), Positives = 84/128 (64%)
Frame = +2
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
+SW+PRAFVY FL++ EC+H +++AK L +S+V D+ + +S S + TSS MF+
Sbjct: 8 VSWKPRAFVYEGFLTESECDHFMSIAKSDLKRSAVADNLSSESKVSEITTSSCMFIPNNN 187
Query: 132 DKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVL 191
D I+ +IE +I+ +TF+P+EN E +Q+L G KY PHYDY ++ + R + +L
Sbjct: 188 DLIVASIEYKISSWTFLPIENEEDIQILICEHGHKYHPHYDYCANKVHITRCTHRSSHIL 367
Query: 192 MYLSDVEE 199
+ L++V +
Sbjct: 368 ISLTNVTD 391
>TC222832 similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, partial (57%)
Length = 619
Score = 109 bits (273), Expect = 1e-24
Identities = 59/141 (41%), Positives = 88/141 (61%), Gaps = 4/141 (2%)
Frame = +1
Query: 70 EILSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESR--VRTSSGMFL 127
++LSW PRA + NF + E+CE +I++AK L K S + + G++ ++ +RTSSG+F+
Sbjct: 163 QVLSWRPRAVYFPNFATAEQCESIIDVAKDGL-KPSTLALRQGETEDNTKGIRTSSGVFV 339
Query: 128 KRGKDKI--IQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQ 185
+DK + IE +IA T IP +GE +L Y V ++Y HYD F Q
Sbjct: 340 SASEDKTRTLDVIEEKIARATMIPRSHGEAFNILRYEVNQRYNSHYDAFNPAEYGPQKSQ 519
Query: 186 RVATVLMYLSDVEEGGETVFP 206
R+A+ L+YL+DVEEGGET+FP
Sbjct: 520 RMASFLLYLTDVEEGGETMFP 582
>TC222216 similar to UP|Q9LSI6 (Q9LSI6) Prolyl 4-hydroxylase alpha
subunit-like protein, partial (27%)
Length = 573
Score = 100 bits (248), Expect = 9e-22
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +1
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
LSW PRAF+Y FLS+EEC+HLI LAK L KS V D+++GKS S VRTSSGMFL + +
Sbjct: 340 LSWSPRAFLYKGFLSEEECDHLITLAKDKLEKSMVADNESGKSIMSEVRTSSGMFLNKAQ 519
Query: 132 DKIIQNIERRIADFTFIP 149
D+I+ IE RIA +TF+P
Sbjct: 520 DEIVAGIEARIAAWTFLP 573
>TC216629 weakly similar to UP|Q8H0X2 (Q8H0X2) Expressed protein (At1g18660),
partial (9%)
Length = 481
Score = 91.3 bits (225), Expect = 4e-19
Identities = 52/87 (59%), Positives = 60/87 (68%), Gaps = 9/87 (10%)
Frame = +2
Query: 9 PRSQVKKLST--LILLTLFMLTLVIIVLLALGILYLPNTTDDSLITD----RRKIY---E 59
P + KK ST L+L LF LTL++I+LLALGI+YLP T DD TD RRK E
Sbjct: 44 PEHKGKKWSTFSLVLWVLFFLTLILILLLALGIVYLPTTDDDFPTTDLSAFRRKTSQSGE 223
Query: 60 SLAEKKEQWTEILSWEPRAFVYHNFLS 86
SL E EQWTEILSWEPRAF+YHN L+
Sbjct: 224 SLVENSEQWTEILSWEPRAFIYHNCLA 304
>BM521712 similar to GP|21618073|gb| prolyl 4-hydroxylase alpha subunit-like
protein {Arabidopsis thaliana}, partial (30%)
Length = 412
Score = 86.3 bits (212), Expect = 1e-17
Identities = 39/78 (50%), Positives = 59/78 (75%)
Frame = +1
Query: 72 LSWEPRAFVYHNFLSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGK 131
+SW+PRAFVY FL++ EC+HLI++AK L +S+V D+ +G+S S VRTSSGMF+ + K
Sbjct: 166 VSWKPRAFVYDVFLTELECDHLISIAKSELKRSAVADNLSGESKLSEVRTSSGMFIPKNK 345
Query: 132 DKIIQNIERRIADFTFIP 149
D I+ +E +I+ +T +P
Sbjct: 346 DPIVAGVEDKISSWTLLP 399
>BE822836
Length = 610
Score = 84.0 bits (206), Expect = 6e-17
Identities = 45/110 (40%), Positives = 65/110 (58%)
Frame = -2
Query: 148 IPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPA 207
IP +G +L Y V +KY+ HYD F + QR+A+ L+YLS+VE GGET+FP
Sbjct: 606 IPXTHGXIFNILKYEVXQKYDSHYDAFNPDEYXXVESQRIASFLLYLSNVEAGGETMFPY 427
Query: 208 AKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLDASSLHG 257
++ D +C GL +KP+ GD LLF+S+ P+ +D +SLHG
Sbjct: 426 EGG--LNIDRGYDYQKCI--GLKVKPRQGDGLLFYSLLPNGKIDKTSLHG 289
>TC227195
Length = 594
Score = 77.4 bits (189), Expect = 6e-15
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +2
Query: 218 WNDLSECARKGLSLKPKMGDALLFWSMRPDATLDASSLHG 257
WN+LSEC +KGLS+KPK GDALLFWSM+PDATLD SSLHG
Sbjct: 11 WNELSECGKKGLSIKPKRGDALLFWSMKPDATLDPSSLHG 130
>TC222148 weakly similar to UP|Q75ZI4 (Q75ZI4) Prolyl 4-hydroxylase, partial
(40%)
Length = 619
Score = 71.6 bits (174), Expect = 3e-13
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Frame = +1
Query: 1 MAKGKHTHPRSQVKKLSTLILLTLFMLTLVIIVLLALGILYLPNTTDDSLITDRRKIYES 60
M KGK + ++ + IL LF + L L L +K YE
Sbjct: 103 MMKGKVKSSKLKLGVPTLFILCALFFFVGFFVSPLLFQDLDDVGPRSRILQESVKKEYEP 282
Query: 61 L--AEKKEQW-----TEILSWEPRAFVYHNFLSKEECEHLINLAKPFL--AKSSVVDSKT 111
L E E + ++ILSW PRA + NF S E C+ +I +AKP L +K ++ +T
Sbjct: 283 LEHGESGEPFVDSIPSQILSWRPRAVFFPNFTSVEVCQQIIEMAKPKLEPSKLALRKGET 462
Query: 112 GKSTESRVRTSSGMFLKRGKDK--IIQNIERRIADFTFIPVENGEGLQVLHY 161
+ST+ RTSSG F+ +DK I+ +ER+IA T IP +GE +L Y
Sbjct: 463 AESTKD-TRTSSGTFISASEDKSGILDLVERKIAKVTMIPRTHGEIFNILKY 615
>BI971299
Length = 669
Score = 70.5 bits (171), Expect = 7e-13
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Frame = -1
Query: 131 KDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATV 190
+D I+ IE R++ + E + QV+HYG E + DYF + + G +AT+
Sbjct: 660 EDDILARIEERLSXXXXLXXEYSKPXQVMHYGP-EPNGRNLDYFTXKTQLELSGPLMATI 484
Query: 191 LMYLSDVE-EGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDAT 249
++YLS+ +GG+ +FP SVP + S C+ L+P G+A+LF+S+ P A+
Sbjct: 483 VLYLSNAATQGGQILFP------ESVPRSSSWSSCSNSSNILQPVKGNAILFFSLHPSAS 322
Query: 250 LDASSLH 256
D +S H
Sbjct: 321 PDKNSFH 301
>BE823168
Length = 654
Score = 67.0 bits (162), Expect = 8e-12
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = -1
Query: 187 VATVLMYLSDVEEGGETVFPAAKAN--FSSVPWWNDLSECARKGLSLKPKMGDALLFWSM 244
VA LMYL+DV +GGETVF A + +L ECA+KG+++KP+ GDALLF+S+
Sbjct: 654 VAXXLMYLTDVXKGGETVFXDAXXSPRHKGSETNENLXECAQKGIAVKPRRGDALLFFSL 475
Query: 245 RPDATLDASSLH 256
P+A D SLH
Sbjct: 474 YPNAIPDTLSLH 439
>TC222092 similar to UP|Q8VZD7 (Q8VZD7) AT3g28480/MFJ20_16, partial (26%)
Length = 455
Score = 63.2 bits (152), Expect = 1e-10
Identities = 32/61 (52%), Positives = 41/61 (66%)
Frame = +2
Query: 197 VEEGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLDASSLH 256
VE+GGET+FP A+A P SECA KG ++KP+ GDALLF+ + DA+ D SLH
Sbjct: 2 VEKGGETIFPNAEAKLLQ-PKDESWSECAHKGYAVKPRKGDALLFFILHLDASTDTKSLH 178
Query: 257 G 257
G
Sbjct: 179 G 181
>TC234894 weakly similar to UP|ELK3_HUMAN (P41970) ETS-domain protein Elk-3
(ETS-related protein NET) (ETS-related protein ERP) (SRF
accessory protein 2) (SAP-2), partial (5%)
Length = 408
Score = 55.8 bits (133), Expect = 2e-08
Identities = 29/78 (37%), Positives = 43/78 (54%), Gaps = 9/78 (11%)
Frame = +1
Query: 18 TLILLTLFMLTLVIIVLLALGILYLPNTTDDSLITD---------RRKIYESLAEKKEQW 68
TL LL L + +I++ LAL IL P+ S ++ + E + ++W
Sbjct: 109 TLTLLLLLTCSFLILIPLALRILSTPHVNSSSALSKPNDLNSVPRNTHVSEGENNRVKRW 288
Query: 69 TEILSWEPRAFVYHNFLS 86
E++SWEPRAF+YHNFLS
Sbjct: 289 VEVMSWEPRAFLYHNFLS 342
Score = 35.8 bits (81), Expect = 0.020
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 151 ENGEGLQVLHYGVGEKYEPHYDY 173
E+GE L V+ Y VG+ YEPH DY
Sbjct: 339 EHGEPLHVIRYAVGQYYEPHVDY 407
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,187,397
Number of Sequences: 63676
Number of extensions: 142784
Number of successful extensions: 738
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of query: 257
length of database: 12,639,632
effective HSP length: 95
effective length of query: 162
effective length of database: 6,590,412
effective search space: 1067646744
effective search space used: 1067646744
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC137702.2