BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137666.7 - phase: 0
(1079 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP005379 ORF (334 AA) 447 e-125
CF922321 310 2e-84
TC233500 similar to UP|Q6I8M7 (Q6I8M7) Soybean Tgm5 transposable... 279 5e-75
CF922798 240 2e-63
TC233466 similar to UP|Q6I8M7 (Q6I8M7) Soybean Tgm5 transposable... 150 1e-50
BF424817 119 6e-27
TC212179 76 7e-14
CF806023 33 0.68
TC210753 similar to UP|Q9SAF1 (Q9SAF1) F3F19.20 protein (Actin-r... 32 1.2
TC216319 31 2.6
TC204730 similar to UP|Q8LQF0 (Q8LQF0) OJ1529_G03.6 protein, par... 27 2.8
CF921916 31 3.4
AW396581 30 4.4
TC204729 weakly similar to UP|Q8LQF0 (Q8LQF0) OJ1529_G03.6 prote... 27 5.0
TC229982 UP|PHYA_SOYBN (P42500) Phytochrome A, complete 30 5.7
BI320750 30 7.5
TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotei... 30 7.5
AW704003 similar to GP|19850243|gb| cytosolic aldehyde dehydroge... 29 9.8
TC223496 similar to UP|Q86QY3 (Q86QY3) Glucosamine-6-phosphate i... 29 9.8
TC226137 similar to UP|O48847 (O48847) Expressed protein (At2g32... 29 9.8
>NP005379 ORF (334 AA)
Length = 1002
Score = 447 bits (1150), Expect = e-125
Identities = 199/333 (59%), Positives = 263/333 (78%), Gaps = 12/333 (3%)
Frame = +1
Query: 156 GWSDRSFTDLLTLLKDILPKNNVLPSRTYEAKRLLCSIGMSYEKIHACPNDCILFQNEYA 215
GWSD+SFT LL ++ D+LP++N LP Y+AK++LC +GM Y+KIHACPNDCIL+++E+
Sbjct: 4 GWSDKSFTSLLQIVHDLLPQDNTLPKSYYQAKKILCPMGMEYQKIHACPNDCILYRHEFE 183
Query: 216 SLNMCPKCSASRYKKKETG------------PSKVLWYFPIIPRFRRMYRNAEDAKNLTW 263
++ CP+C ASRYK K+ P+KVLWY PIIPRF+R++ N +DAK+LTW
Sbjct: 184 EMSKCPRCGASRYKVKDDEDCSSDENSKKGPPAKVLWYLPIIPRFKRLFANEDDAKDLTW 363
Query: 264 HANERVNDGMLRHPADSPQWAKIDNDYSDFGKETRNLRLALSTDGINPHGLQSGKHTTWP 323
HAN R +DGM+RHPAD QW KID+ Y +FGKE RNLRL L++DG+NP+G S +H++WP
Sbjct: 364 HANGRKSDGMVRHPADCSQWKKIDSLYPNFGKEARNLRLGLASDGMNPYGNLSTQHSSWP 543
Query: 324 VILLIYNLPPWLCMKRKFMMLTMLISGPTQPGNDIDIYLAPLIEDLKHMWETGVEVYDEY 383
V+L+IYN PPWLCMKRK+MML+M+ISGP QPGNDID+YL+PLIEDL+ +W+ GV V+D +
Sbjct: 544 VLLVIYNFPPWLCMKRKYMMLSMMISGPRQPGNDIDVYLSPLIEDLRKLWDEGVLVFDGF 723
Query: 384 KKESFILRAMLFGTINDFPAYGNLSGYSVKGKCACPVCEDHTNWIRLEHCQKNVFLGHRR 443
+KE+F +RAMLF TINDFPAYGNLSGYSVKG ACP+CE+ T++I+L+H +K V+ HR
Sbjct: 724 RKETFQMRAMLFCTINDFPAYGNLSGYSVKGHLACPICEEDTSYIQLKHGRKTVYTRHRV 903
Query: 444 FLNTKHHYRKWKKAFNGESEEDRAPSPLTGDQL 476
FL H YR+ KKAFNG E + +PLTG+Q+
Sbjct: 904 FLKAHHPYRRLKKAFNGSQEHEIRRTPLTGEQV 1002
>CF922321
Length = 742
Score = 310 bits (795), Expect = 2e-84
Identities = 142/246 (57%), Positives = 188/246 (75%)
Frame = -1
Query: 244 IIPRFRRMYRNAEDAKNLTWHANERVNDGMLRHPADSPQWAKIDNDYSDFGKETRNLRLA 303
IIPR +R++ N +DAK+LTWHAN R DGM+R A S QW KID Y D GKE NLRL
Sbjct: 742 IIPRLKRLFANGDDAKDLTWHANGRNCDGMIRRLAVSSQWKKIDRLYLDLGKEASNLRLG 563
Query: 304 LSTDGINPHGLQSGKHTTWPVILLIYNLPPWLCMKRKFMMLTMLISGPTQPGNDIDIYLA 363
L++DG+NP+G S H++WPV+L+IYNLPPWLCMKRK+MML+M+IS P QPGNDID+YL+
Sbjct: 562 LASDGMNPYGSSST*HSSWPVLLVIYNLPPWLCMKRKYMMLSMMISNPRQPGNDIDVYLS 383
Query: 364 PLIEDLKHMWETGVEVYDEYKKESFILRAMLFGTINDFPAYGNLSGYSVKGKCACPVCED 423
LIEDL +W+ G ++ + E+F +RAMLF TINDFPAYGNLSGY+VKG +CP+CE+
Sbjct: 382 SLIEDLTKLWDEGFLAFNGFWNETFPMRAMLFCTINDFPAYGNLSGYNVKGHHSCPICEE 203
Query: 424 HTNWIRLEHCQKNVFLGHRRFLNTKHHYRKWKKAFNGESEEDRAPSPLTGDQLYEKVKLL 483
+T++I+L+H +K V+ HRRFL H YR+ KKAFNG D P PLT +++Y++V+ L
Sbjct: 202 NTSYIQLKHGRKTVYSRHRRFLTPNHPYRRLKKAFNGSQGHDIVPIPLTAEEVYQRVQHL 23
Query: 484 SSKFGK 489
++ GK
Sbjct: 22 NNVLGK 5
>TC233500 similar to UP|Q6I8M7 (Q6I8M7) Soybean Tgm5 transposable element
(Fragment), partial (65%)
Length = 1033
Score = 279 bits (713), Expect = 5e-75
Identities = 133/221 (60%), Positives = 168/221 (75%)
Frame = +2
Query: 259 KNLTWHANERVNDGMLRHPADSPQWAKIDNDYSDFGKETRNLRLALSTDGINPHGLQSGK 318
K+LTWHAN R D MLRH ADS QW KID Y DFGKET+NL L L+TD +NP+G S +
Sbjct: 2 KDLTWHANGRNCDRMLRHLADSLQWKKIDRLYPDFGKETKNLTLGLATDAMNPYGCLSTQ 181
Query: 319 HTTWPVILLIYNLPPWLCMKRKFMMLTMLISGPTQPGNDIDIYLAPLIEDLKHMWETGVE 378
H +WPV+L+IYNLP WLCMKRK+MML+M+I+GP QPGNDI++YL PLIEDL + + GV
Sbjct: 182 HNSWPVLLVIYNLPHWLCMKRKYMMLSMMITGPRQPGNDINVYLNPLIEDLTKL*DEGVL 361
Query: 379 VYDEYKKESFILRAMLFGTINDFPAYGNLSGYSVKGKCACPVCEDHTNWIRLEHCQKNVF 438
V+D ++ E+F L AMLF TINDFP Y NLSGYSVKG ACP+CE+ T++I+ +H +K V+
Sbjct: 362 VFDGFRNETFNLCAMLFCTINDFPTYENLSGYSVKGHRACPICEEDTSYIQQKHGRKTVY 541
Query: 439 LGHRRFLNTKHHYRKWKKAFNGESEEDRAPSPLTGDQLYEK 479
HRRFL H YR+ KKAFN E + A LTGDQ++++
Sbjct: 542 TRHRRFLKPHHPYRRLKKAFNES*EHENALVLLTGDQVFQR 664
>CF922798
Length = 617
Score = 240 bits (613), Expect = 2e-63
Identities = 113/204 (55%), Positives = 152/204 (74%)
Frame = -2
Query: 286 IDNDYSDFGKETRNLRLALSTDGINPHGLQSGKHTTWPVILLIYNLPPWLCMKRKFMMLT 345
ID+ Y DF KE NLRL L+TDG+NP+G S +++ W V+L+IYNL PWLCM +K+MML+
Sbjct: 616 IDHLYLDFSKEAINLRLGLATDGMNPYGSLSTQYSLWSVLLVIYNLSPWLCMNKKYMMLS 437
Query: 346 MLISGPTQPGNDIDIYLAPLIEDLKHMWETGVEVYDEYKKESFILRAMLFGTINDFPAYG 405
M+I P QPGNDID+YL+PLIEDL + + V V+D ++ E+F L AMLF TINDFPAYG
Sbjct: 436 MMILSPRQPGNDIDVYLSPLIEDLTML*DEEVLVFDGFQNETFHLCAMLFCTINDFPAYG 257
Query: 406 NLSGYSVKGKCACPVCEDHTNWIRLEHCQKNVFLGHRRFLNTKHHYRKWKKAFNGESEED 465
NLSGYSVK ACP+CE+ T++I+L+H +K ++ H+RFL H YR+ KK FNG E +
Sbjct: 256 NLSGYSVKSHRACPICEEDTSYIQLKHGRKTIYTRHQRFLKPHHLYRRLKKEFNGSQEHE 77
Query: 466 RAPSPLTGDQLYEKVKLLSSKFGK 489
P L GD +Y++V+ L++ FGK
Sbjct: 76 TTPILLVGDHVYQQVQHLNTIFGK 5
>TC233466 similar to UP|Q6I8M7 (Q6I8M7) Soybean Tgm5 transposable element
(Fragment), partial (37%)
Length = 790
Score = 150 bits (379), Expect(2) = 1e-50
Identities = 67/134 (50%), Positives = 95/134 (70%), Gaps = 12/134 (8%)
Frame = +2
Query: 145 ILKLYKLKAGNGWSDRSFTDLLTLLKDILPKNNVLPSRTYEAKRLLCSIGMSYEKIHACP 204
+L L +KA G SD+SF+ LL ++ D+LP+ N LP Y+AK++LCS+ M Y KIHACP
Sbjct: 386 VLSLVNMKARYGCSDKSFSSLLQVVHDVLPEENTLPKSYYQAKKILCSMDMEY*KIHACP 565
Query: 205 NDCILFQNEYASLNMCPKCSASRYKKKE-----------TGP-SKVLWYFPIIPRFRRMY 252
NDCIL+++E+ ++ CP+C SRYK K+ GP +KVLWY PI+P+F+R++
Sbjct: 566 NDCILYRHEFEEMSKCPRCGVSRYKVKDDEECSSDENSKKGPLAKVLWYLPIVPKFKRLF 745
Query: 253 RNAEDAKNLTWHAN 266
N +DAK+LTWHAN
Sbjct: 746 ANGDDAKDLTWHAN 787
Score = 69.3 bits (168), Expect(2) = 1e-50
Identities = 41/137 (29%), Positives = 65/137 (46%), Gaps = 10/137 (7%)
Frame = +3
Query: 16 EDGVQEFVRFAIANA--EDTSKIICPCLECCY-TNVSANDLQDHLICNGIDKSYTCWTMH 72
E+GV++F++ A + ++ K CPC+ C ND++DHL+C+ I ++YT W H
Sbjct: 6 EEGVEQFLQLASERSRPDENGKFFCPCINCLNGRRQKVNDIRDHLLCDEIKRNYTTWIWH 185
Query: 73 GEKKTKSAKRRNE------RDPSTDFEKDTNYE-FDQVEEILNVIEDDLRDCPKMFERVV 125
GE + ++E RD D +D E F Q M++ +
Sbjct: 186 GEMADMQSGPQSEPFDVEMRDRLEDMIRDLGQESFQQAH-------------APMYDTLQ 326
Query: 126 IDAETPLYEGCTKFTRL 142
ID++TPLY GC L
Sbjct: 327 IDSKTPLYPGCNNLLTL 377
>BF424817
Length = 413
Score = 119 bits (299), Expect = 6e-27
Identities = 61/136 (44%), Positives = 80/136 (57%), Gaps = 2/136 (1%)
Frame = +2
Query: 917 DRNPAFAKLSYFGVIEHIWELDYSSFQVLVFGCKWVDNNNGVQFDH-GFMKVDLNREGYR 975
D NP A + YFG I+ IWEL+Y F V VF C+WVD+N GV D GFM VDL + GY
Sbjct: 5 DANPCVASIPYFGFIDEIWELNYVKFTVCVFKCEWVDSNTGVHTDDIGFMLVDLKKLGYH 184
Query: 976 DEPFILASQAHQVFYVTDPADEKWSIVLLSNKINDHHDQECENRDVEDDPF-FNTSHSLE 1034
++PFI+A QA QVFYV DP DE+W +VL I + + + D P + ++
Sbjct: 185 NDPFIMAEQARQVFYVQDPCDERWCVVLQGKTIGINVEDDDSYMDTYVSPLTAQITPNVV 364
Query: 1035 DEPITDDILYMRNDHN 1050
E DD+ RNDH+
Sbjct: 365 GEEEADDVHANRNDHD 412
>TC212179
Length = 764
Score = 76.3 bits (186), Expect = 7e-14
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 MDRKWMSANRASKEYEDGVQEFVRFAI--ANAEDTSKIICPCLECCY-TNVSANDLQDHL 57
MDR WM+ +R S EYE+GV++F++FA ++ K CPC+ C +D+++HL
Sbjct: 31 MDRSWMNQSRISPEYEEGVEQFLQFASQRGQPDEDGKYYCPCINCLNGRRQILDDIREHL 210
Query: 58 ICNGIDKSYTCWTMHGEKKTKSAKRRNE 85
+C+GI ++YT W HGE + +++E
Sbjct: 211 LCDGIKRNYTTWIWHGEMTDMQSGQQSE 294
>CF806023
Length = 652
Score = 33.1 bits (74), Expect = 0.68
Identities = 20/62 (32%), Positives = 31/62 (49%)
Frame = +1
Query: 671 LPTLQNEIVVTLCELEMYFPPSFFDIMVHLTVHLIMETQYCGPAYMRWMYPIERYMKILK 730
L L ++ VTLC + PPS I + LT+ +M+ Y G M +M+ + + K
Sbjct: 124 LAPLLEDMPVTLCLWLAHSPPSL--IALSLTLTCLMQQCYTGQCLMHYMWKVMLLTVLQK 297
Query: 731 GY 732
GY
Sbjct: 298 GY 303
>TC210753 similar to UP|Q9SAF1 (Q9SAF1) F3F19.20 protein (Actin-related
protein 3) (At1g13180), partial (8%)
Length = 1210
Score = 32.3 bits (72), Expect = 1.2
Identities = 13/37 (35%), Positives = 20/37 (53%)
Frame = +3
Query: 49 SANDLQDHLICNGIDKSYTCWTMHGEKKTKSAKRRNE 85
+ D++ HLIC+GI +Y W HGE + + E
Sbjct: 288 TVKDIRSHLICDGIVPTYIKWI*HGESSNMATVSQAE 398
>TC216319
Length = 1306
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +1
Query: 149 YKLKAGNGWSDRSFTDLLTLLKD--ILP----KNNVLPSRTYEAKRLLCSIGMSYEKIH 201
YK++ G W D+ F ++ TL+ D + P NVLP+ + +L +G S+ +H
Sbjct: 829 YKIERGRSWYDQIFINVTTLILDGFVCPAASFSYNVLPALMW----ILLKVGYSFSDLH 993
>TC204730 similar to UP|Q8LQF0 (Q8LQF0) OJ1529_G03.6 protein, partial (97%)
Length = 2084
Score = 27.3 bits (59), Expect(2) = 2.8
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 424 HTN-WIRLEHCQKNVFLGHRRFLNTKHHYRKWKKAFNGESEEDRAPSPLTGDQLYEKVKL 482
HTN ++RL +F G R TKH +K + GES + P T ++LY +V+
Sbjct: 1504 HTNPYVRL------LFKGEER--KTKH-VKKNRDPRWGESFQFMLEEPPTNERLYVEVQS 1656
Query: 483 LSSKFG 488
SSK G
Sbjct: 1657 ASSKLG 1674
Score = 21.9 bits (45), Expect(2) = 2.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 486 KFGKPFSGELVTGGW 500
+F FSGEL+ GW
Sbjct: 1784 EFKSSFSGELLDDGW 1828
>CF921916
Length = 621
Score = 30.8 bits (68), Expect = 3.4
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +2
Query: 500 WKKKSIFFELPYWKSLYVRHFLDVMHIEKNVFDSVVGTLLNIPGKSKDGINARLDMQSMG 559
WKK ++ +EL W S LD+ + + V S + L +P S L
Sbjct: 272 WKKVTVIYELNNWLSSDPGMLLDLTYALRQV-GSEIDNHLALPSLSS------LSDPKSN 430
Query: 560 LRNELRPVKKDGKRTFL 576
+ NEL+ +K R FL
Sbjct: 431 IENELKKLKSKSNRVFL 481
>AW396581
Length = 401
Score = 30.4 bits (67), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (50%)
Frame = -1
Query: 74 EKKTKSAKRRNERDPSTDFEKDTNYEFDQVEEILNVIEDDLRDCPKM 120
EKK K K + ++D TD EK E + ++ ++DD D K+
Sbjct: 338 EKKEKKKKEKKDKDDKTDVEKVKGKEDKEKKKKEKKVKDDKTDAEKV 198
>TC204729 weakly similar to UP|Q8LQF0 (Q8LQF0) OJ1529_G03.6 protein, partial
(35%)
Length = 944
Score = 27.3 bits (59), Expect(2) = 5.0
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 424 HTN-WIRLEHCQKNVFLGHRRFLNTKHHYRKWKKAFNGESEEDRAPSPLTGDQLYEKVKL 482
HTN ++RL +F G R TKH +K + GES + P T ++LY +V+
Sbjct: 306 HTNPYVRL------LFKGEER--KTKH-VKKNRDPRWGESFQFMLEEPPTNERLYVEVQS 458
Query: 483 LSSKFG 488
SSK G
Sbjct: 459 ASSKLG 476
Score = 21.2 bits (43), Expect(2) = 5.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 486 KFGKPFSGELVTGGW 500
+F FSGEL+ GW
Sbjct: 586 EFKLSFSGELLDDGW 630
>TC229982 UP|PHYA_SOYBN (P42500) Phytochrome A, complete
Length = 3690
Score = 30.0 bits (66), Expect = 5.7
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -1
Query: 893 DQQSTMQNSGVTLVAQSLHISSAKDR---NPAFAKLSYFGVIEHIWELDYSSFQVLVFGC 949
D+ + VTL H +S ++R NPA KLS +E IW D L++G
Sbjct: 1569 DRNQNTMSFAVTLTDAIPHTTSPRERADGNPASNKLSVLKDVESIWYSDNHKAISLIWGS 1390
Query: 950 KWVDNN 955
V N
Sbjct: 1389 LGVTPN 1372
>BI320750
Length = 428
Score = 29.6 bits (65), Expect = 7.5
Identities = 19/68 (27%), Positives = 30/68 (43%)
Frame = +3
Query: 762 NVESIGLPMSRHSGRTTGEGIGASKLVTISDIELEQAHLYVLHNADEVEPYVKKHKEILQ 821
NVE + +P T G L + S L +L V + D ++ + KHK Q
Sbjct: 201 NVELLVIPAISLLTETWSAVFGFESLESTSKQILHNKNLLVFPHVDMLQKKISKHKLAGQ 380
Query: 822 SLNPNRSE 829
+LNP+ +
Sbjct: 381 NLNPSEGQ 404
>TC219643 weakly similar to UP|Q6WAY7 (Q6WAY7) Gag/pol polyprotein
(Fragment), partial (8%)
Length = 1320
Score = 29.6 bits (65), Expect = 7.5
Identities = 27/102 (26%), Positives = 45/102 (43%), Gaps = 2/102 (1%)
Frame = +3
Query: 72 HGEKKTKSAKRRNERDPSTDFEKDTNYEFDQVEEILNVIEDDLRDCPKMFERVVI--DAE 129
+G +S + N DPS DFE+ N D+ E + + P ER+V D E
Sbjct: 807 NGRSDDESPEGTNTWDPSIDFEQKMNQTEDEGNEDVGL--------PPELERMVAHEDQE 962
Query: 130 TPLYEGCTKFTRLSTILKLYKLKAGNGWSDRSFTDLLTLLKD 171
++ T+ L + ++K G G + +L+ LL+D
Sbjct: 963 MGPHQEETELVDLGSGSGKREVKIGTGITAPIREELIILLRD 1088
>AW704003 similar to GP|19850243|gb| cytosolic aldehyde dehydrogenase RF2C
{Zea mays}, partial (7%)
Length = 394
Score = 29.3 bits (64), Expect = 9.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 628 HVLMGNFLPIAIRSILPENVRWTITKLCFFFKAI 661
HVL+ F + I I RW +TKLCFF + I
Sbjct: 218 HVLLNRFF-VFISKI---KARWLVTKLCFFLEVI 129
>TC223496 similar to UP|Q86QY3 (Q86QY3) Glucosamine-6-phosphate isomerase,
partial (6%)
Length = 405
Score = 29.3 bits (64), Expect = 9.8
Identities = 22/69 (31%), Positives = 34/69 (48%)
Frame = -1
Query: 216 SLNMCPKCSASRYKKKETGPSKVLWYFPIIPRFRRMYRNAEDAKNLTWHANERVNDGMLR 275
SL++C C +KKE G SK F I + +KNL+W + +++DG R
Sbjct: 381 SLSLCCYCHHCNRRKKEKGKSKNQIDFKIGIGYC--------SKNLSWRSWIQISDGGGR 226
Query: 276 HPADSPQWA 284
A+S +A
Sbjct: 225 FGAESDVFA 199
>TC226137 similar to UP|O48847 (O48847) Expressed protein
(At2g32700/F24L7.16), partial (15%)
Length = 417
Score = 29.3 bits (64), Expect = 9.8
Identities = 16/48 (33%), Positives = 25/48 (51%)
Frame = +3
Query: 913 SSAKDRNPAFAKLSYFGVIEHIWELDYSSFQVLVFGCKWVDNNNGVQF 960
S+ D+ P F +Y G H+ LD+ + +F C DNNN ++F
Sbjct: 201 SAGHDKKPTFPLHTYSGHTSHVVSLDFHPKKTELF-CS-CDNNNEIRF 338
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,204,974
Number of Sequences: 63676
Number of extensions: 835040
Number of successful extensions: 4079
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4074
length of query: 1079
length of database: 12,639,632
effective HSP length: 107
effective length of query: 972
effective length of database: 5,826,300
effective search space: 5663163600
effective search space used: 5663163600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC137666.7