BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137553.12 + phase: 0
(535 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC222348 59 2e-22
TC231922 79 4e-15
BU547962 73 3e-13
TC233956 69 5e-12
CA851073 68 1e-11
TC221865 67 2e-11
TC213061 65 1e-10
CO979823 61 1e-09
BI973267 60 2e-09
BE610670 60 2e-09
TC233392 60 3e-09
BQ453949 58 9e-09
AW595917 58 9e-09
BU765000 58 1e-08
BG404993 58 1e-08
BM527030 57 2e-08
CO986021 57 2e-08
CO984521 56 5e-08
BE660043 55 1e-07
CF921567 54 1e-07
>TC222348
Length = 995
Score = 58.5 bits (140), Expect(3) = 2e-22
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -2
Query: 374 PPLNWTKCNTDGSTSGS--LSSCGGIFRNCNSEMLICFGENTGIGNSLHAELSGAMRAIE 431
P W KCNTD + G+ L+ CG +F N+ L F + I ++ AE+ A+ AIE
Sbjct: 328 PDYPWIKCNTDCAARGNPGLAGCGKLFIYSNARFLGNFAYSIAINSAFFAEVMAAIIAIE 149
Query: 432 LAISHQWLNLWLEVDSELVIRAFKNQSIV 460
A+ ++W LWL+ DS + + K ++
Sbjct: 148 KAVENRWNFLWLKTDSSFQLSSAKYNPVI 62
Score = 57.0 bits (136), Expect(3) = 2e-22
Identities = 34/108 (31%), Positives = 53/108 (48%)
Frame = -3
Query: 207 LVWRFMLNKLPTDDNLMNKGCNLPSMCSLCNNMSETTHHLFLECSFALNLWSWFAGILNC 266
++W+ + NK PTDDNL +G + S+C+ + SET H FL F + +W + +LNC
Sbjct: 765 ILWKALHNKFPTDDNLWKRGIHFVSVCTNFGHDSETVDHFFLYRPFTRQI*NWISSMLNC 586
Query: 267 SINIQSKEDLWNICNGSWNPQCKTVIIASLINIINSIWYARNQRRFQN 314
DL +I N ++A++ IW RN +F N
Sbjct: 585 C------SDLSSIHN----------VLAAITFSFFFIWKRRNLIKF*N 490
Score = 28.9 bits (63), Expect(3) = 2e-22
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 336 LSRKVASPSISNFVILKKFCVTLHPPRAPKIIEVIWQ 372
LS V I++F LK F V+ HP +A I +V W+
Sbjct: 446 LSLLVYDKFITDFSTLKNFSVSSHPQKAQVIKQVSWK 336
>TC231922
Length = 803
Score = 79.3 bits (194), Expect = 4e-15
Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Frame = -3
Query: 75 EFQNLIDNSNWLVGDGDTINCWLDNWCGE------TLVDLFDIDSQQLNMLPKKLRNYMQ 128
+F ++ N W VG GD I W D+W E L+ I S+Q N+ K+ + Q
Sbjct: 735 DFHSIHQNMVWRVGCGDKIKFWQDSWLSEGCNLQQKYNQLYTI-SRQ*NLTISKMGKFSQ 559
Query: 129 NF-NWCFP------DDILSLFPDMRLLASKVTIPKHCIRDKLIWKHSNNGELTLQDAYKF 181
N +W F D ++ D S ++I D + WK ++G + + AY+
Sbjct: 558 NARSWEFKWRRRLFDYEYAMAVDFMNEISGISIQNQA-HDSMFWKADSSGVYSTKSAYRL 382
Query: 182 KKTNF---PKVNWAKHIWSPDIPPSKALLVWRFMLNKLPTDDNLMNKGCNLPS-MCSLCN 237
+ P + +W IPP A+ WR L++LPT NL + + MC LC
Sbjct: 381 LMPSISPAPSRRIFQILWHLKIPPRAAVFSWRLFLDRLPTRGNLSRRSIPIQDIMCPLCG 202
Query: 238 NMSETTHHLFLECSFALNLW 257
E HLF C LW
Sbjct: 201 CQHEEAGHLFFHCKMTKGLW 142
>BU547962
Length = 591
Score = 73.2 bits (178), Expect = 3e-13
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Frame = -2
Query: 396 GIFRNCNSEMLICFGENTGIGNSLHAELSGAMRAIELAISHQWLNLWLEVDSELVIRAFK 455
G+ RN N+E L + E+ G NS AEL+ + +EL + + W ++WLE D++ ++
Sbjct: 590 GVVRNHNAEFLXXYAESIGQANSTIAELTALRKGLELVLENGWNDIWLEGDAKTLVEIIV 411
Query: 456 NQSIVPWHLRNRWMNCM--LLTRNMNFIATHIFRERNVCADLLAFTGHNLDNFTVWMNVP 513
+ V R +N + +L NF +HI+RE N AD A GH+LD +W + P
Sbjct: 410 KRRKVRCTEVQRHINHINTILPEFNNFFVSHIYREGNRAADKFAQMGHHLDQPRIWRHPP 231
>TC233956
Length = 757
Score = 68.9 bits (167), Expect = 5e-12
Identities = 44/164 (26%), Positives = 73/164 (43%), Gaps = 10/164 (6%)
Frame = +2
Query: 161 DKLIWKHSNNGELTLQDAYKFKKTNFPKVNWA---KHIWSPDIPPSKALLVWRFMLNKLP 217
D +W+ + G ++ + AY+ K+ K +W +PP VWR + ++LP
Sbjct: 59 DTWVWRAESTGIISTKSAYQVIKSELDDEGQHLGFKKLWEIKVPPKALSFVWRLLWDRLP 238
Query: 218 TDDNLMNKGCNL-PSMCSLCNNMSETTHHLFLECSFALNLW----SWFA--GILNCSINI 270
T DNL+ + + +C C++ SET HLF C + LW SW + +C
Sbjct: 239 TKDNLIKRQIQVEDDLCPFCHSQSETASHLFFTCGKIMPLWWEFLSWVKEDKVFHC---- 406
Query: 271 QSKEDLWNICNGSWNPQCKTVIIASLINIINSIWYARNQRRFQN 314
+ ++ + + + T I + NSIW RN FQN
Sbjct: 407 RPMDNFLQHYSSAASKVSNTRRTMWWIAVTNSIWRLRNDIIFQN 538
>CA851073
Length = 633
Score = 67.8 bits (164), Expect = 1e-11
Identities = 47/169 (27%), Positives = 74/169 (42%), Gaps = 7/169 (4%)
Frame = +1
Query: 152 VTIPKHCIRDKLIWKHSNNGELTLQDAYKFKKT---NFPKVNWAKHIWSPDIPPSKALLV 208
+ I H ++D ++WK G + + AY+ T + + N K IW IPP A+
Sbjct: 4 IQIQSH-LQDTMVWKADPCGVYSTKSAYRILMTCNRHVSEANIFKTIWKLKIPPRAAVFS 180
Query: 209 WRFMLNKLPTDDNLMNKGCNL-PSMCSLCNNMSETTHHLFLECSFALNLWSWFAGILN-- 265
WR + ++LPT NL+ + ++ + C LC E HLF C LW W + N
Sbjct: 181 WRLIKDRLPTRHNLLRRNVSIQENECPLCGYEQEEADHLFFNCKMTRGLW-WESMRWNQI 357
Query: 266 -CSINIQSKEDLWNICNGSWNPQCKTVIIASLINIINSIWYARNQRRFQ 313
+++ C+G + T I + +SIW RN FQ
Sbjct: 358 VGPLSVSPASHFVQFCDGFGAGRNHTRWCGWWIALTSSIWKHRNLLIFQ 504
>TC221865
Length = 1045
Score = 67.0 bits (162), Expect = 2e-11
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Frame = -3
Query: 85 WLVGDGDTINCWLDNWCGE--TLVD----LFDIDSQQLNMLPKKLRNYMQNFNWCFP--- 135
W VG GD W D GE TL+ ++ I QQ ++ + + + W F
Sbjct: 929 WKVGCGDKFRFWEDKLVGEGETLMRKYPRMYQISCQQQQLIQQVGSHTETTWEWKFQWRR 750
Query: 136 -------DDILSLFPDMRLLASKVTIPKHCIRDKLIWKHSNNGELTLQDAYKFKKTNFPK 188
D + D+ S+ I +H + D +WK NG + + AY + K
Sbjct: 749 PLFDNEVDTTIGFLEDI----SRFPIHRH-LTDCWVWKSEPNGHYSTRSAYHLMQHEAAK 585
Query: 189 VNWA---KHIWSPDIPPSKALLVWRFMLNKLPTDDNLMNKGCNLP-SMCSLCNNMSETTH 244
N + IW IP A+ R + ++LPT +NL + L ++C C N E
Sbjct: 584 ANTDPAFEEIWKLKIPAKAAIFA*RLVKDRLPTKNNLRRRQVQLNGTLCLFCRNYEEEAS 405
Query: 245 HLFLECSFALNLW 257
HLF C+ +W
Sbjct: 404 HLFFSCTKTQPVW 366
>TC213061
Length = 823
Score = 64.7 bits (156), Expect = 1e-10
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +2
Query: 159 IRDKLIWKHSNNGELTLQDAYKFKKTNFPKVNWA---KHIWSPDIPPSKALLVWRFMLNK 215
I D+ +W ++G + AY+ + P+ K +W +P + WR + +
Sbjct: 122 IEDQWVWAAESSGSYLARSAYRVIREGIPEEEQDREFKELWKLKVPMKVTMFAWRLLKDI 301
Query: 216 LPTDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECSFALNLW 257
LPT DNL K L +C LC +M E+ HLF CS L +W
Sbjct: 302 LPTRDNLRRKRVELHEYVCPLCRSMDESASHLFFHCSKILPIW 430
>CO979823
Length = 853
Score = 60.8 bits (146), Expect = 1e-09
Identities = 49/171 (28%), Positives = 74/171 (42%), Gaps = 13/171 (7%)
Frame = -2
Query: 161 DKLIWKHSNNGELTLQDAYKFK----KTNFPKVNWAKHIWSPDIPPSKALLVWRFMLNKL 216
DK +WK G + + Y ++A+ IW IP A+ WR + ++L
Sbjct: 702 DKWLWKPEPGGHYSTKSGYHVLWGELTEEIQDADFAE-IWKLKIPTKAAVFAWRLVRDRL 526
Query: 217 PTDDNLMNKGCNLPSM-CSLCNNMSETTHHLFLECSFALNLW----SWFAGILNCSINIQ 271
PT NL + + M C LCNN+ E HLF C+ L LW SW L ++
Sbjct: 525 PTKSNLRRRQVMVQDMVCPLCNNIEEGAAHLFFNCTKTLPLWWESMSWVN--LKTAMPQT 352
Query: 272 SKEDL----WNICNGSWNPQCKTVIIASLINIINSIWYARNQRRFQNIKIH 318
++ +I +G + + K IA + +IW RN+ FQN H
Sbjct: 351 PRQHFLQYGTDIADGLKSKRWKCWWIA----LTWTIWQHRNKVVFQNATFH 211
>BI973267
Length = 406
Score = 60.5 bits (145), Expect = 2e-09
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +1
Query: 159 IRDKLIWKHSNNGELTLQDAYKFKKTNFP---KVNWAKHIWSPDIPPSKALLVWRFMLNK 215
++D W+ NGE T + Y+ ++ + + + + IPP WR + ++
Sbjct: 55 LKDTWTWRAEANGEFTTKSTYQVLQSELDDQGQYEGFQQLCNIKIPPKALSFAWRLL*DR 234
Query: 216 LPTDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECSFALNLW 257
LPT DNL+ + + + +C C+N ET HLF +C + +W
Sbjct: 235 LPTKDNLVKRQIQVENDLCPFCHNQPETASHLFFKCDKIMPMW 363
>BE610670
Length = 368
Score = 60.1 bits (144), Expect = 2e-09
Identities = 35/101 (34%), Positives = 48/101 (46%), Gaps = 4/101 (3%)
Frame = -2
Query: 161 DKLIWKHSNNGELTLQDAYKFKKT--NFPKVNWA-KHIWSPDIPPSKALLVWRFMLNKLP 217
D LIW+ +G + + AY K +F + A K IW+ IPP WR N+LP
Sbjct: 313 DSLIWRADPSGAYSTKSAYNLLKGEGSFDNEDSASKIIWNLKIPPRTIAFSWRIFKNRLP 134
Query: 218 TDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECSFALNLW 257
T NL + LPS C LC+ E H+ C+ +LW
Sbjct: 133 TKANLRRRQVELPSYRCPLCDLEEENVGHIMFSCTRTRSLW 11
>TC233392
Length = 1145
Score = 59.7 bits (143), Expect = 3e-09
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Frame = -1
Query: 159 IRDKLIWKHSNNGELTLQDAYKFKKTNFPKVNW---AKHIWSPDIPPSKALLVWRFMLNK 215
+ D +WKH N + + AYK + + + + +W IP ++ WR + ++
Sbjct: 662 VPDTWVWKHEPNELYSTRSAYKLLQGHLEGEDQDGALQDLWKLKIPAKASIFAWRLIRDR 483
Query: 216 LPTDDNLMNKGCNL-PSMCSLCNNMSETTHHLFLECSFALNLW----SWFAGILNCSINI 270
LPT NL + L S+C C E H+FLEC+ LW +W + IN
Sbjct: 482 LPTKSNLHRRQVVLEDSLCPFCRIREEDASHIFLECNKIRPLWWESQTWVRSLGVSPIN- 306
Query: 271 QSKEDLWNICNGSWNPQCKTVIIASLINIINSIWYARNQRRFQNIKIH 318
++ +G+ + I + S+W RNQ FQN + +
Sbjct: 305 -KRQHFLQHVHGTPGSKRYNRWKTWWIALTWSLWKHRNQVIFQNAQFN 165
>BQ453949
Length = 450
Score = 58.2 bits (139), Expect = 9e-09
Identities = 32/102 (31%), Positives = 49/102 (47%), Gaps = 4/102 (3%)
Frame = +3
Query: 160 RDKLIWKHSNNGELTLQDAYKFKKTNFPKV---NWAKHIWSPDIPPSKALLVWRFMLNKL 216
RD L+W +++G + + AY F K + + K+IW+ +PP R N++
Sbjct: 27 RDLLLWGSNSDGSYSTKSAYNFLKNEDSQTIEDSAFKNIWNLKLPPRACAFS*RIF*NRI 206
Query: 217 PTDDNLMNKGCNLPSM-CSLCNNMSETTHHLFLECSFALNLW 257
PT NL + LPS C LC+ ET H+ C +LW
Sbjct: 207 PTKVNLRRRHVKLPSSNCPLCDEEEETVGHVMYSCIKTRHLW 332
>AW595917
Length = 404
Score = 58.2 bits (139), Expect = 9e-09
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +1
Query: 195 IWSPDIPPSKALLVWRFMLNKLPTDDNLMNKGCNLPSMCSLCNNMSETTHHLFLECSFAL 254
+W IPP A+ WR + ++LPT NL + S+C LCNN E HLF CS L
Sbjct: 7 LWKLKIPPKAAVFTWRLIKDQLPTKANLRRQMEISDSLCPLCNNSKEDATHLFFNCSKTL 186
Query: 255 NLW 257
W
Sbjct: 187 PFW 195
>BU765000
Length = 425
Score = 57.8 bits (138), Expect = 1e-08
Identities = 25/66 (37%), Positives = 34/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 193 KHIWSPDIPPSKALLVWRFMLNKLPTDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECS 251
K +W +PP A+ WR + ++LPT DNL K L +C C M E+ HLF C
Sbjct: 53 KELWKLKVPPKVAVFAWRLLKDRLPTRDNLRRKQVELHEYLCPFCRTMEESACHLFFHCR 232
Query: 252 FALNLW 257
L +W
Sbjct: 233 KVLPVW 250
>BG404993
Length = 412
Score = 57.8 bits (138), Expect = 1e-08
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = -3
Query: 153 TIPKHCIRDKLIWKHSNNGELTLQDAYKFKKTNFPKVNWAK---HIWSPDIPPSKALLVW 209
TI +H D WK +G + + AY+ + N +W IPP + W
Sbjct: 353 TIQQH-EADSWTWKADPSGNYSTKTAYELLQEAIRGDNEDGIFVQLWKLKIPPKAPVFTW 177
Query: 210 RFMLNKLPTDDNLMNKGCNLP-SMCSLCNNMSETTHHLFLECSFALNLW 257
R + ++LPT NL + + S+C LCNN E HLF C+ L W
Sbjct: 176 RLINDRLPTKVNLRRRQVEISDSLCPLCNNSEEDAAHLFFNCNKTLPFW 30
>BM527030
Length = 421
Score = 57.0 bits (136), Expect = 2e-08
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +3
Query: 160 RDKLIWKHSNNGELTLQDAYKF--KKTNFPKVNWAKHIWSPDIPPSKALLVWRFMLNKLP 217
+D L+WK + ++D Y F + TN V + + IW IP + A+ W+ +KLP
Sbjct: 87 QDSLVWKLALTECYFVRDPYLFLIENTNPVYVLFYRSIWMLAIPHNVAIFEWKLSKDKLP 266
Query: 218 TDDNLMNKGCNLP---SMCSLCNNMSETTHHLFLECSFALNLW 257
T NL + L +C C+ E + HL CSF+ +W
Sbjct: 267 TRKNLQCRNILLEEQHQLCPFCSGKEEDSSHLIFTCSFSYQIW 395
>CO986021
Length = 900
Score = 57.0 bits (136), Expect = 2e-08
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = -1
Query: 159 IRDKLIWKHSNNGELTLQDAYKFKKTNFPKVNWA---KHIWSPDIPPSKALLVWRFMLNK 215
++D ++WK G + + AY+ N + K +W IPP L WR ++
Sbjct: 789 LQDSMLWKADPTGIYSTKSAYRLLLPNNRPGQHSSNFKILWKLKIPPRAELFSWRLFRDR 610
Query: 216 LPTDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECSFALNLW 257
L NL+ + L MC LC N E HLF C + LW
Sbjct: 609 LSIRANLLRRHVALQDIMCPLCGNHQEEAGHLFFHCRMTIGLW 481
>CO984521
Length = 716
Score = 55.8 bits (133), Expect = 5e-08
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 193 KHIWSPDIPPSKALLVWRFMLNKLPTDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECS 251
K +W +P A+ WR + +KLPT NL K L +C LC ++ ET HLF CS
Sbjct: 541 KELWKLRVPLKVAIFAWRLIQDKLPTKANLRKKRVELQEYLCPLCRSVEETASHLFFHCS 362
Query: 252 FALNLW 257
LW
Sbjct: 361 KVSPLW 344
>BE660043
Length = 714
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Frame = -2
Query: 161 DKLIWKHSNNGELTLQDAYKFKKTNFPKVNWA---KHIWSPDIPPSKALLVWRFMLNKLP 217
D +WK +NG + ++AY + N + N K +W IP ++ R + ++LP
Sbjct: 626 DSWVWKPESNGYYSSRNAYILLQGNSEEGNMDDIFKDLWKLKIPAKASIFAGRLIRDRLP 447
Query: 218 TDDNLMNKGCNL-PSMCSLCNNMSETTHHLFLECS 251
T N+ + ++ S+C C+ ET HLF +CS
Sbjct: 446 TKSNMRKRQIDINDSLCPFCSIKEETASHLFFDCS 342
>CF921567
Length = 686
Score = 54.3 bits (129), Expect = 1e-07
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -1
Query: 195 IWSPDIPPSKALLVWRFMLNKLPTDDNLMNKGCNLPS-MCSLCNNMSETTHHLFLECSFA 253
+WS IPP + WR N+LPT +NL + +L + C LC+ E+ +HLF CS
Sbjct: 593 MWSLKIPPRASAFSWRLFKNRLPTRENLKRRQVSLHTYSCPLCDLEEESVNHLFFNCSKT 414
Query: 254 LNLW 257
+LW
Sbjct: 413 RSLW 402
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.324 0.136 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,925,109
Number of Sequences: 63676
Number of extensions: 647720
Number of successful extensions: 4695
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 4561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4640
length of query: 535
length of database: 12,639,632
effective HSP length: 102
effective length of query: 433
effective length of database: 6,144,680
effective search space: 2660646440
effective search space used: 2660646440
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC137553.12