TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136841.8 + phase: 0 /pseudo
         (119 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA801099                                                               55  4e-09
CO982097                                                               30  0.12
BI498628                                                               28  0.61
TC214319 homologue to UP|EFT1_SOYBN (Q43467) Elongation factor T...    27  1.4
TC220561 similar to UP|Q9K7F6 (Q9K7F6) BH3405 protein, partial (...    26  2.3
TC215541 similar to UP|Q84KK7 (Q84KK7) Respiratory burst oxidase...    26  3.0
TC217323                                                               26  3.0
TC227682 similar to GB|CAA55484.1|509419|ATABI1G ABI1 {Arabidops...    25  3.9
TC232100 similar to UP|Q8GV45 (Q8GV45) Fertilization independent...    25  3.9
BI967540                                                               25  5.2
TC214154 weakly similar to UP|Q7XAK4 (Q7XAK4) GID2 protein, part...    25  5.2
TC210433 similar to UP|Q9LRP0 (Q9LRP0) Emb|CAB39405.1, partial (...    25  5.2
TC223439                                                               25  6.7
TC207452 similar to UP|Q9FUA4 (Q9FUA4) SPATULA, partial (31%)          25  6.7
CO984131                                                               25  6.7
AI900050                                                               24  8.8
TC230504 similar to UP|Q9SCY3 (Q9SCY3) FKBP like protein  , part...    24  8.8
TC219380 similar to UP|Q9K7F6 (Q9K7F6) BH3405 protein, partial (...    24  8.8
BG790227                                                               24  8.8
TC223536 similar to UP|Q9FYM0 (Q9FYM0) F21J9.9, partial (4%)           24  8.8

>CA801099 
          Length = 438

 Score = 55.5 bits (132), Expect = 4e-09
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5   LHGPLHAAGYFLNPQ-FHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKW 63
           LH PLHAAG+FLNP  F S+H    D E   GL+ C+ ++V D E R KI  +L  F KW
Sbjct: 149 LHHPLHAAGHFLNPDLFFSNHSMEFDFEVVNGLYVCLEKLVPDQEVRQKILTEL-PFIKW 325


>CO982097 
          Length = 805

 Score = 30.4 bits (67), Expect = 0.12
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = -2

Query: 36  LHDCITRMV-ADPEERAKIEIQLDDFDKWANDMGYSVAAGNE---VPSVWWSPFGKGLPE 91
           L D I R    DP+ +  +  ++  F     D G  VA       +P  WW  +G G P 
Sbjct: 804 LLDVIERYAHGDPDLQFNLASEMRIFKNAELDFGRLVATRERNTVMPDEWWESYGCGTPN 625

Query: 92  LQK 94
           LQK
Sbjct: 624 LQK 616


>BI498628 
          Length = 308

 Score = 28.1 bits (61), Expect = 0.61
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = -3

Query: 29  DIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWANDMGYS----VAAGNEVPSVWWSP 84
           D+EG+GG  D +     +  E  ++E +  + +++  D G      V  G E   V    
Sbjct: 261 DLEGEGGEDDSVGGAGVEDAEEGEVEAKELEGEEFGGDSGAEEGGMVLGGGEAVGVVRVE 82

Query: 85  FGKGLPELQ 93
            G+GL E++
Sbjct: 81  VGEGLEEVR 55


>TC214319 homologue to UP|EFT1_SOYBN (Q43467) Elongation factor Tu,
          chloroplast precursor (EF-Tu), complete
          Length = 1583

 Score = 26.9 bits (58), Expect = 1.4
 Identities = 11/29 (37%), Positives = 15/29 (50%)
 Frame = -1

Query: 48 EERAKIEIQLDDFDKWANDMGYSVAAGNE 76
          EER  +E++ +D D W N M    A   E
Sbjct: 95 EERKGVELREEDDDAWGNSMSLEEAVAEE 9


>TC220561 similar to UP|Q9K7F6 (Q9K7F6) BH3405 protein, partial (12%)
          Length = 899

 Score = 26.2 bits (56), Expect = 2.3
 Identities = 10/19 (52%), Positives = 12/19 (62%)
 Frame = -1

Query: 74  GNEVPSVWWSPFGKGLPEL 92
           GNE P++WWS     LP L
Sbjct: 644 GNEDPNIWWSNVFSLLPSL 588


>TC215541 similar to UP|Q84KK7 (Q84KK7) Respiratory burst oxidase homolog,
           partial (54%)
          Length = 1695

 Score = 25.8 bits (55), Expect = 3.0
 Identities = 12/32 (37%), Positives = 19/32 (58%)
 Frame = -3

Query: 69  YSVAAGNEVPSVWWSPFGKGLPELQKFVSCIK 100
           YS    +++P + WS   K L EL  F++C+K
Sbjct: 349 YSFP*FDKIPII*WSVSEKRLHELVLFIACMK 254


>TC217323 
          Length = 516

 Score = 25.8 bits (55), Expect = 3.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 4   TLHGPLHAAGYFLNPQFH 21
           +LH PLH + +F N  FH
Sbjct: 395 SLHSPLHTSWHFHNSHFH 448


>TC227682 similar to GB|CAA55484.1|509419|ATABI1G ABI1 {Arabidopsis
          thaliana;} , partial (51%)
          Length = 1489

 Score = 25.4 bits (54), Expect = 3.9
 Identities = 10/39 (25%), Positives = 20/39 (50%)
 Frame = +1

Query: 28 DDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAND 66
          DD++GK G+ +    M    EE   + + + + D+  +D
Sbjct: 55 DDVDGKSGISELCPSMKPPVEETVSVAMDITNEDQSGSD 171


>TC232100 similar to UP|Q8GV45 (Q8GV45) Fertilization independent endosperm
           development protein, partial (60%)
          Length = 783

 Score = 25.4 bits (54), Expect = 3.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 41  TRMVADPEERAKIEIQLDDFDKWANDMGYSVAAGNEVPSVWWSP 84
           T+ V  P   A + +   D ++W  D   S +  NE+  + W P
Sbjct: 232 TKYVQFPVYNASVHLNYVDCNRWLGDFILSKSVDNEI--ILWEP 357


>BI967540 
          Length = 692

 Score = 25.0 bits (53), Expect = 5.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 78  PSVWWSPFGKGLPELQK 94
           P  WW+ +G  +P LQK
Sbjct: 557 PGDWWASYGYEIPTLQK 507


>TC214154 weakly similar to UP|Q7XAK4 (Q7XAK4) GID2 protein, partial (22%)
          Length = 905

 Score = 25.0 bits (53), Expect = 5.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 70  SVAAGNEVPSVWWSP 84
           +VAA  E P VWW P
Sbjct: 563 NVAASIESPGVWWGP 519


>TC210433 similar to UP|Q9LRP0 (Q9LRP0) Emb|CAB39405.1, partial (10%)
          Length = 748

 Score = 25.0 bits (53), Expect = 5.2
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
 Frame = +3

Query: 46  DPEERAKIEIQLDDFDKWANDMGYSVAAGNEV---PSVWWSPFGKGLPELQK 94
           D   R    +Q+  ++   +D G  +A        P+ WW   G    ELQ+
Sbjct: 69  DNMRRISASMQIAHYNAAQDDFGTELAISTRTGLEPAAWWQQHGISCLELQR 224


>TC223439 
          Length = 464

 Score = 24.6 bits (52), Expect = 6.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 21  HSSHGFRDDIEGKGGLHDCITRMVA 45
           HS+ GFRD I+G    +  IT   A
Sbjct: 101 HSNFGFRDSIDGSATTNVAITPSAA 175


>TC207452 similar to UP|Q9FUA4 (Q9FUA4) SPATULA, partial (31%)
          Length = 1207

 Score = 24.6 bits (52), Expect = 6.7
 Identities = 8/15 (53%), Positives = 12/15 (79%)
 Frame = -3

Query: 84  PFGKGLPELQKFVSC 98
           PFG G+P+ +KF+ C
Sbjct: 596 PFGFGVPDRKKFLGC 552


>CO984131 
          Length = 896

 Score = 24.6 bits (52), Expect = 6.7
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -1

Query: 47  PEERAKIEIQLDDFDKWANDMGYSVAAGNEVPSVWWSPFGKGLPEL 92
           P ++  +E+Q D+F  ++ +   S+A G  +   +W  FG  L +L
Sbjct: 428 PTQKPNVEVQEDEFSLFSREFYMSMAFGFVIS--FWVVFGSILFKL 297


>AI900050 
          Length = 424

 Score = 24.3 bits (51), Expect = 8.8
 Identities = 11/26 (42%), Positives = 18/26 (68%)
 Frame = -3

Query: 19  QFHSSHGFRDDIEGKGGLHDCITRMV 44
           +FHS  GF+  +EG+GG+ + I + V
Sbjct: 350 EFHS--GFKSFLEGEGGVANVIRKRV 279


>TC230504 similar to UP|Q9SCY3 (Q9SCY3) FKBP like protein  , partial (68%)
          Length = 988

 Score = 24.3 bits (51), Expect = 8.8
 Identities = 12/22 (54%), Positives = 13/22 (58%)
 Frame = +1

Query: 77 VPSVWWSPFGKGLPELQKFVSC 98
          VPS +W P GK   E  K VSC
Sbjct: 46 VPSCFWKPNGKSCKERTK-VSC 108


>TC219380 similar to UP|Q9K7F6 (Q9K7F6) BH3405 protein, partial (12%)
          Length = 948

 Score = 24.3 bits (51), Expect = 8.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 74  GNEVPSVWWS 83
           GNE P++WWS
Sbjct: 603 GNEDPNIWWS 574


>BG790227 
          Length = 396

 Score = 24.3 bits (51), Expect = 8.8
 Identities = 11/34 (32%), Positives = 17/34 (49%)
 Frame = -3

Query: 40  ITRMVADPEERAKIEIQLDDFDKWANDMGYSVAA 73
           + RMV +    AK  + LDD++K    + Y   A
Sbjct: 196 VVRMVKEKRGNAKTSLDLDDWEKRRVALAYGFEA 95


>TC223536 similar to UP|Q9FYM0 (Q9FYM0) F21J9.9, partial (4%)
          Length = 590

 Score = 24.3 bits (51), Expect = 8.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 17  NPQFHSSHGFR 27
           +PQ HSSHGF+
Sbjct: 475 SPQLHSSHGFK 443


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.333    0.149    0.525 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,917,074
Number of Sequences: 63676
Number of extensions: 76955
Number of successful extensions: 393
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of query: 119
length of database: 12,639,632
effective HSP length: 95
effective length of query: 24
effective length of database: 6,590,412
effective search space: 158169888
effective search space used: 158169888
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 51 (24.3 bits)