BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136506.8 - phase: 1
(358 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC218695 similar to UP|Q9LDC0 (Q9LDC0) FKBP-like protein (Arabid... 626 e-180
TC206087 similar to UP|Q38931 (Q38931) Rof1, partial (50%) 136 1e-32
TC206031 similar to UP|Q38949 (Q38949) Rof1 , partial (68%) 129 3e-30
TC227909 similar to UP|Q38949 (Q38949) Rof1 , partial (43%) 125 4e-29
TC206030 similar to UP|Q38949 (Q38949) Rof1 , partial (27%) 76 2e-14
TC227910 similar to UP|Q38931 (Q38931) Rof1, partial (18%) 64 8e-11
TC219338 similar to UP|O64403 (O64403) Pasticcino 1-D, partial (... 63 2e-10
TC220521 similar to UP|FKB7_WHEAT (Q43207) 70 kDa peptidylprolyl... 60 2e-09
TC220139 similar to UP|FKB7_WHEAT (Q43207) 70 kDa peptidylprolyl... 59 3e-09
AW761357 59 3e-09
TC229760 similar to UP|Q9C566 (Q9C566) Cyclophilin-40 (Expressed... 59 3e-09
BE660901 similar to GP|10177347|db peptidylprolyl isomerase {Ara... 58 6e-09
TC219332 similar to UP|Q9C566 (Q9C566) Cyclophilin-40 (Expressed... 57 1e-08
TC232375 similar to UP|Q9FJL3 (Q9FJL3) Peptidylprolyl isomerase,... 57 1e-08
TC219978 weakly similar to UP|Q94GR7 (Q94GR7) Chloroplast protei... 50 2e-06
TC220617 weakly similar to UP|Q9SIN1 (Q9SIN1) Expressed protein ... 49 5e-06
TC217766 weakly similar to UP|Q9MAH1 (Q9MAH1) F12M16.20 (At1g533... 48 6e-06
TC206844 similar to UP|Q8H1H4 (Q8H1H4) Type 5 serine/threonine p... 47 2e-05
TC203882 similar to UP|FKB2_VICFA (Q41649) FK506-binding protein... 46 2e-05
TC208001 similar to UP|Q84LW7 (Q84LW7) Peptidylprolyl cis-trans ... 45 5e-05
>TC218695 similar to UP|Q9LDC0 (Q9LDC0) FKBP-like protein (Arabidopsis
thaliana genomic DNA, chromosome 3, P1 clone: MIL23),
partial (79%)
Length = 1562
Score = 626 bits (1614), Expect = e-180
Identities = 301/353 (85%), Positives = 328/353 (92%)
Frame = +1
Query: 6 DEVIDENSEYEKGETPEELLSSPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHY 65
+EVI ++S + KGE E S+PPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHY
Sbjct: 226 NEVITKSSAFVKGEPAPEFSSNPPKVDSEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHY 405
Query: 66 RAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGQ 125
RAW+E ++HKFEDTWQEQRP EMV+GKEKKEMTGLGIGVASMKAGERAL+RV WELGYG+
Sbjct: 406 RAWAEKSQHKFEDTWQEQRPIEMVLGKEKKEMTGLGIGVASMKAGERALVRVGWELGYGE 585
Query: 126 EGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNVLFQENK 185
EGSFSFPNVPP ADLVYEVELIGFDETK+GKARSDMTVEERIGAADRRKMDGN L+QE K
Sbjct: 586 EGSFSFPNVPPKADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQEEK 765
Query: 186 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCS 245
LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLN AACLIKLNRYEEAIGQCS
Sbjct: 766 LEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCS 945
Query: 246 IVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDKAIARELKLLAEHDKAI 305
IVL EDE+N+KALFRRGKARAALGQTD AREDFLKA K+AP+DKAIA+EL+LLAEHDKA+
Sbjct: 946 IVLGEDENNVKALFRRGKARAALGQTDTAREDFLKASKYAPQDKAIAKELRLLAEHDKAV 1125
Query: 306 YQKQKEIYKGIFGPRPQPVPQKRNWFIVVWQWLVSVFHNFITLFNREKKHKDD 358
YQKQKEIYKGIFGPRPQPVP+ RNW I++WQWL+SVF+ +TLF RE +HK D
Sbjct: 1126YQKQKEIYKGIFGPRPQPVPKPRNWLILIWQWLLSVFYGLVTLFKRE-RHKSD 1281
>TC206087 similar to UP|Q38931 (Q38931) Rof1, partial (50%)
Length = 1183
Score = 136 bits (343), Expect = 1e-32
Identities = 92/279 (32%), Positives = 147/279 (51%), Gaps = 2/279 (0%)
Frame = +3
Query: 41 KVTKQIIKEGHG-QKPSKYSTCFFHYRAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMTG 99
KV K+ +KEG G ++P+ + ++ + + +++P E I +E+ + G
Sbjct: 18 KVLKKTLKEGEGYERPNDGAVVQVKLIGKLQDGTVFVKKGYVDEQPFEFKIDEEQV-IDG 194
Query: 100 LGIGVASMKAGERALLRVSWELGYGQEGSFS-FPNVPPMADLVYEVELIGFDETKDGKAR 158
L V +MK GE ALL + E +G GS NVPP + + YEVEL+ F + K+
Sbjct: 195 LDQAVKNMKKGEIALLIIQPEYAFGPSGSSQELANVPPNSTVYYEVELLSFVKEKESW-- 368
Query: 159 SDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALA 218
D+ +E+I AA ++K +GN F+ K E A ++YE AI ++ D F + + A
Sbjct: 369 -DLNTQEKIEAAGKKKEEGNAFFKVGKYERASKRYEKAIKFVEYDSSFS--DEEKQQTKA 539
Query: 219 VKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDF 278
+K C+LN AAC +KL Y++A C+ VL D N+KAL+RR +A L D A D
Sbjct: 540 LKITCNLNNAACKLKLKDYKQAEKMCTKVLELDSRNVKALYRRAQAYLHLVDLDLAEMDI 719
Query: 279 LKARKHAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIF 317
KA + P ++ + E K+L + + +K + Y IF
Sbjct: 720 KKALEIEPNNRDVKMEYKILKQKVREHNKKDAQFYGSIF 836
>TC206031 similar to UP|Q38949 (Q38949) Rof1 , partial (68%)
Length = 1350
Score = 129 bits (323), Expect = 3e-30
Identities = 90/280 (32%), Positives = 143/280 (50%), Gaps = 2/280 (0%)
Frame = +2
Query: 40 EKVTKQIIKEGHG-QKPSKYSTCFFHYRAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMT 98
+KV K+I+KEG G + P++ + ++ + ++ E++ +
Sbjct: 296 KKVIKKILKEGEGYEHPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGGLFEFKTDEEQVID 475
Query: 99 GLGIGVASMKAGERALLRVSWELGYGQ-EGSFSFPNVPPMADLVYEVELIGFDETKDGKA 157
GL V +MK GE ALL ++ E +G E VPP + L YE+EL+ F++ K+
Sbjct: 476 GLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTLYYEIELVSFEKEKESW- 652
Query: 158 RSDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMAL 217
DM E+I AA ++K +GN LF+ K A ++YE A+ ++ D F K AL
Sbjct: 653 --DMDTPEKIEAAGKKKEEGNALFKAGKYARASKRYEKAVKFIEYDTAFSEEEKKSSKAL 826
Query: 218 AVKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAARED 277
V C+LN AAC +KL Y++A C+ VL + +N+KAL+RR +A L D A D
Sbjct: 827 KVA--CNLNNAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRAQAYIQLADLDLAEFD 1000
Query: 278 FLKARKHAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIF 317
KA + P ++ + E K L E K +K+ + Y +F
Sbjct: 1001IKKALEIDPNNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 1120
Score = 33.1 bits (74), Expect = 0.20
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +2
Query: 104 VASMKAGERALLRVSWELGYGQEGSFSFPN---VPPMADLVYEVELIGFDETKDGKARSD 160
V +MK GE+ LL V + G+G++G + + VPP A L +EL+ + K S+
Sbjct: 122 VKTMKKGEKVLLTVKPQYGFGEKGKPAHGDEGAVPPNATLQITLELVSW------KTVSE 283
Query: 161 MTVEERI 167
+T ++++
Sbjct: 284 VTDDKKV 304
>TC227909 similar to UP|Q38949 (Q38949) Rof1 , partial (43%)
Length = 999
Score = 125 bits (313), Expect = 4e-29
Identities = 77/222 (34%), Positives = 123/222 (54%), Gaps = 1/222 (0%)
Frame = +1
Query: 93 EKKEMTGLGIGVASMKAGERALLRVSWELGYG-QEGSFSFPNVPPMADLVYEVELIGFDE 151
E++ + GL V +MK GE ALL ++ + +G E VPP + + +EVEL+ F++
Sbjct: 85 EEQVVDGLDRAVLTMKKGEVALLTIAPDYAFGTSESQQELAVVPPNSTVYFEVELVSFEK 264
Query: 152 TKDGKARSDMTVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGK 211
K+ D+ EE++ AA ++K +GNVLF+ +K A ++YE A+ Y+ D F +
Sbjct: 265 EKESW---DLNTEEKLEAAGKKKEEGNVLFKASKYARASKRYEKAVKYIEYDSSFG--EE 429
Query: 212 YRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQT 271
+ A +K C+LN AAC +KL Y+EA C+ VL + +N+KAL+RR +A L
Sbjct: 430 EKKQAKTLKVACNLNNAACKLKLKDYKEAEKLCTKVLDLESTNVKALYRRAQAHMQLTNL 609
Query: 272 DAAREDFLKARKHAPEDKAIARELKLLAEHDKAIYQKQKEIY 313
D A D KA P ++ + E + L E K +K+ + Y
Sbjct: 610 DLAELDIKKALDIDPNNRDVKLEYRTLKEKVKENNRKEAQFY 735
>TC206030 similar to UP|Q38949 (Q38949) Rof1 , partial (27%)
Length = 763
Score = 76.3 bits (186), Expect = 2e-14
Identities = 47/146 (32%), Positives = 75/146 (51%)
Frame = +2
Query: 172 RRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACL 231
++K + LF+ K A ++YE A+ ++ D F K +L V C+LN AAC
Sbjct: 2 KKKEEXXALFKAGKYARAXKRYEKAVKFIEYDTAFSEEEKKSSKSLKVA--CNLNNAACK 175
Query: 232 IKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDKAI 291
+KL Y++A C+ VL + +N+KAL+RR +A L D A D KA + P ++ +
Sbjct: 176 LKLKDYKQAEKLCTKVLDLESTNVKALYRRTQAYIQLADLDLAEFDIKKALELEPNNRDV 355
Query: 292 ARELKLLAEHDKAIYQKQKEIYKGIF 317
E L E K +K+ + Y +F
Sbjct: 356 KLEYVTLKEKMKEYNKKEAKFYGNMF 433
>TC227910 similar to UP|Q38931 (Q38931) Rof1, partial (18%)
Length = 590
Score = 64.3 bits (155), Expect = 8e-11
Identities = 36/94 (38%), Positives = 53/94 (56%)
Frame = +1
Query: 220 KNPCHLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFL 279
K C+LN AAC +KL Y+EA C+ VL + +N+KAL+RR +A L D A D
Sbjct: 1 KVACNLNNAACKLKLKDYKEAEKLCTKVLDLESTNVKALYRRAQAYMQLTDLDLAELDIK 180
Query: 280 KARKHAPEDKAIARELKLLAEHDKAIYQKQKEIY 313
KA + P ++ + E + L E KA +K+ + Y
Sbjct: 181 KALEIDPNNRDVKLEYRTLKEKVKANNRKEAQFY 282
>TC219338 similar to UP|O64403 (O64403) Pasticcino 1-D, partial (17%)
Length = 758
Score = 63.2 bits (152), Expect = 2e-10
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Frame = +1
Query: 224 HLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDF---LK 280
HLN AAC +KL +++I C+ VL + +++K L+RRG A A G + AR DF +K
Sbjct: 4 HLNVAACHLKLGECKKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKVMMK 183
Query: 281 ARKHAPEDKAIARELKLLAEHDKAIYQKQKEIYKGIFGPRPQPVPQKR 328
K D A L+ L + ++ + +K ++ +KG+F +P + + +
Sbjct: 184 VDKSTESDATAA--LQKLKQKEQDVEKKARKQFKGLFDKKPGEISEAK 321
>TC220521 similar to UP|FKB7_WHEAT (Q43207) 70 kDa peptidylprolyl isomerase
(Peptidyl-prolyl cis-trans isomerase) (PPIase)
(Rotamase) , partial (40%)
Length = 890
Score = 60.1 bits (144), Expect = 2e-09
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = +1
Query: 7 EVIDENSEYEKG---ETPEELLSSPP--KVDSEVEVLHEKVTKQIIKEGHG-QKPSKYST 60
E + E+ E+ E PEE P KV E E+ + K+++KEG G P
Sbjct: 145 EAMGEDFEFPSAGNMEMPEEEEFESPILKVGEEKEIGKMGLKKKLLKEGEGWDTPDSGDQ 324
Query: 61 CFFHYRAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWE 120
HY + KF+ + P + +G + + + G G+ +MK GE AL + E
Sbjct: 325 VEVHYTGTLLDGT-KFDSSRDRGTPFKFKLG-QGQVIKGWDEGIKTMKKGENALFTIPPE 498
Query: 121 LGYGQEGSFSFPNVPPMADLVYEVELIGFDETKD 154
L YG+ GS P +PP A L ++VEL+ + KD
Sbjct: 499 LAYGESGSP--PTIPPNATLQFDVELLSWTSVKD 594
>TC220139 similar to UP|FKB7_WHEAT (Q43207) 70 kDa peptidylprolyl isomerase
(Peptidyl-prolyl cis-trans isomerase) (PPIase)
(Rotamase) , partial (29%)
Length = 722
Score = 59.3 bits (142), Expect = 3e-09
Identities = 41/134 (30%), Positives = 65/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 22 EELLSSPPKVDSEVEVLHEKVTKQIIKEGHG-QKPSKYSTCFFHYRAWSENTEHKFEDTW 80
EE+ KV E E+ + K+++KEG G + P HY + KF+ +
Sbjct: 133 EEMDLGEDKVGEEREIGSRGLKKKLLKEGQGWETPEVGDEVQVHYTGTLLDGT-KFDSSR 309
Query: 81 QEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGQEGSFSFPNVPPMADL 140
P +G + + + G G+ +MK GE A+ + EL YG+ GS P +PP A L
Sbjct: 310 DRDSPFSFTLG-QGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSP--PTIPPNATL 480
Query: 141 VYEVELIGFDETKD 154
++VEL+ + KD
Sbjct: 481 QFDVELLSWTSVKD 522
>AW761357
Length = 304
Score = 59.3 bits (142), Expect = 3e-09
Identities = 34/108 (31%), Positives = 53/108 (48%)
Frame = +2
Query: 167 IGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLN 226
+ AD K++GN LF E K EEA+ QYE+A+ D +++ CH N
Sbjct: 5 LNRADEAKVEGNKLFVEWKYEEALVQYELAVRAAPD----------MPGCEEIRSICHSN 154
Query: 227 TAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAA 274
C +KL +Y+ + +C+ L + +KAL R G+A L + A
Sbjct: 155 RGVCSLKLGKYDNTVEECTKALELNPVYIKALVRAGEAHDKLEHCEEA 298
>TC229760 similar to UP|Q9C566 (Q9C566) Cyclophilin-40 (Expressed protein),
partial (70%)
Length = 1164
Score = 58.9 bits (141), Expect = 3e-09
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Frame = +2
Query: 169 AADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAV---KNPCHL 225
+ D K GN +++ + A+++Y A+ Y+ D ++ G +++ + K+
Sbjct: 338 SVDSIKAFGNDYYRKQDYKMALRKYRKALRYL--DICWEKEGIDEEISSGLRKTKSQIFT 511
Query: 226 NTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHA 285
N++A +KL + A+ + E ++N KALFR+G+A AL DAA E F KA
Sbjct: 512 NSSASKLKLGDIKGALLDTEFAMREGDNNAKALFRQGQAYMALHDIDAAVESFKKALTLE 691
Query: 286 PEDKAIARELKLLAEHDKAIYQKQKEIYKGIF 317
P D I +EL + +K+ Y +F
Sbjct: 692 PNDAGIKKELAAARKKIADRRDLEKKAYSKMF 787
>BE660901 similar to GP|10177347|db peptidylprolyl isomerase {Arabidopsis
thaliana}, partial (34%)
Length = 724
Score = 58.2 bits (139), Expect = 6e-09
Identities = 40/126 (31%), Positives = 62/126 (48%), Gaps = 1/126 (0%)
Frame = +2
Query: 30 KVDSEVEVLHEKVTKQIIKEGHG-QKPSKYSTCFFHYRAWSENTEHKFEDTWQEQRPTEM 88
KV E E+ E + K+++KEG G P HY + KF+ + P
Sbjct: 86 KVGEEKEIGKEGLKKKLLKEGEGWDTPEVGDEVQVHYTGTLLDGT-KFDSSRDRGTPFSF 262
Query: 89 VIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGQEGSFSFPNVPPMADLVYEVELIG 148
+G + + + G G+ +MK GE +L + EL YG+ GS P +PP A L ++VEL+
Sbjct: 263 TLG-QGQVIKGWDQGIITMKKGENSLFTIPAELAYGETGSP--PTIPPNATLQFDVELLS 433
Query: 149 FDETKD 154
+ KD
Sbjct: 434 WTSVKD 451
>TC219332 similar to UP|Q9C566 (Q9C566) Cyclophilin-40 (Expressed protein),
partial (91%)
Length = 1224
Score = 57.4 bits (137), Expect = 1e-08
Identities = 42/152 (27%), Positives = 70/152 (45%), Gaps = 1/152 (0%)
Frame = +3
Query: 167 IGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALA-VKNPCHL 225
+ A D K GN +++ + A+++Y A+ Y+ + + + AL K+
Sbjct: 624 MSAVDAIKTLGNEQYKKQDYKMALRKYRKALRYLDVCWEKEDIDQENSAALRKTKSQIFT 803
Query: 226 NTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHA 285
N++AC +KL + A+ + D N KALFR+G+A L DAA E F KA +
Sbjct: 804 NSSACKLKLGDLQGALLDSDFAM-HDGDNAKALFRKGQAYMLLNDLDAAVESFKKALELE 980
Query: 286 PEDKAIARELKLLAEHDKAIYQKQKEIYKGIF 317
P D I +E ++K+ Y +F
Sbjct: 981 PNDGGIKKEYATARRKVADRRDQEKKAYSRMF 1076
>TC232375 similar to UP|Q9FJL3 (Q9FJL3) Peptidylprolyl isomerase, partial
(21%)
Length = 559
Score = 57.0 bits (136), Expect = 1e-08
Identities = 48/151 (31%), Positives = 73/151 (47%), Gaps = 4/151 (2%)
Frame = +3
Query: 3 NNVDEVIDENSEYEKGETPEELLS-SPP--KVDSEVEVLHEKVTKQIIKEGHG-QKPSKY 58
+N+DE D + GE + S S P KV E E+ E + K+++KEG G P
Sbjct: 114 HNMDEDFDMAAAEPMGEDFDFAGSGSNPVLKVGEEKEIGKEGLKKKLLKEGEGWDTPEAG 293
Query: 59 STCFFHYRAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVS 118
HY + KF+ + P +G + + + G G+ +MK GE AL +
Sbjct: 294 DEVQVHYTGTLLDGT-KFDSSRDRGTPFSFTLG-QGQVIKGWDQGIITMKKGENALFTIP 467
Query: 119 WELGYGQEGSFSFPNVPPMADLVYEVELIGF 149
EL YG+ GS P +PP A L ++VEL+ +
Sbjct: 468 AELAYGESGSP--PTIPPNATLQFDVELLSW 554
>TC219978 weakly similar to UP|Q94GR7 (Q94GR7) Chloroplast
protein-translocon-like protein, partial (33%)
Length = 1237
Score = 49.7 bits (117), Expect = 2e-06
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Frame = +2
Query: 174 KMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIK 233
K GN F+E + +A+ Y AI G + + + N AA +K
Sbjct: 563 KEKGNAAFKERQWSKALSYYSEAIKLNGTNTTY-----------------YCNRAAAHLK 691
Query: 234 LNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDK---- 289
L +++A C + D+ N+KA RRG AR +L + A EDF A P++K
Sbjct: 692 LGCFQQAAEDCGKAILLDKKNVKAYLRRGTARESLLCYEEALEDFKHALVLEPQNKDASL 871
Query: 290 AIARELKLLAEH 301
A R KL++ H
Sbjct: 872 AEKRLRKLMS*H 907
>TC220617 weakly similar to UP|Q9SIN1 (Q9SIN1) Expressed protein
(At2g42580/F14N22.15), partial (32%)
Length = 744
Score = 48.5 bits (114), Expect = 5e-06
Identities = 34/147 (23%), Positives = 59/147 (40%)
Frame = +2
Query: 172 RRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACL 231
R + GN LF EA Y + Y + + + N A C
Sbjct: 140 RARSRGNELFSSGMFSEACSAYGEGLKYDNSNHVL-----------------YCNRAICW 268
Query: 232 IKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHAPEDKAI 291
KL +E+++ CS L+ + KALFRR + L + +D+ ++ P D +
Sbjct: 269 SKLGLWEQSVQDCSQALNIQPNYTKALFRRAASNTKLERWSEVVKDYQALKRELPNDNEV 448
Query: 292 ARELKLLAEHDKAIYQKQKEIYKGIFG 318
A L+ + A+ + ++ +Y FG
Sbjct: 449 AESLR---QAQLALEKSRQMVYGTRFG 520
>TC217766 weakly similar to UP|Q9MAH1 (Q9MAH1) F12M16.20 (At1g53300), partial
(14%)
Length = 844
Score = 48.1 bits (113), Expect = 6e-06
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1
Query: 226 NTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKARKHA 285
N AAC KL ++E+AI C++ L S KA RR A L + +AA +D+ +
Sbjct: 1 NRAACRSKLGQFEKAIEDCNVALIVQPSYSKARLRRADCNAKLERWEAAIQDYEMLLREK 180
Query: 286 PEDKAIAREL 295
P D+ +AR L
Sbjct: 181 PGDEEVARAL 210
>TC206844 similar to UP|Q8H1H4 (Q8H1H4) Type 5 serine/threonine phosphatase
55 kDa isoform (Type 5 protein serine/threonine
phosphatase 55 kDa isoform), complete
Length = 1859
Score = 46.6 bits (109), Expect = 2e-05
Identities = 36/150 (24%), Positives = 61/150 (40%)
Frame = +3
Query: 162 TVEERIGAADRRKMDGNVLFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKN 221
T + + A+ K+ N +F K +A+ Y AI + ++
Sbjct: 192 TEKSNVSKAEEFKLLANEVFNARKYSQAIDLYTQAIELNSQNAVY--------------- 326
Query: 222 PCHLNTAACLIKLNRYEEAIGQCSIVLSEDESNLKALFRRGKARAALGQTDAAREDFLKA 281
N A ++L Y AI + + D K +RRG A LG+ A +DF +
Sbjct: 327 --FSNRAFAHLRLEEYGSAIQDATKAIEIDPKYSKGYYRRGAAHLGLGKFKEALKDFQQV 500
Query: 282 RKHAPEDKAIARELKLLAEHDKAIYQKQKE 311
+K P D ++LK E +KA+ + + E
Sbjct: 501 KKMCPNDPDATKKLK---ECEKAVMKLKFE 581
>TC203882 similar to UP|FKB2_VICFA (Q41649) FK506-binding protein 2 precursor
(Peptidyl-prolyl cis-trans isomerase) (PPIase)
(Rotamase) (15 kDa FKBP) (FKBP-15) , partial (85%)
Length = 944
Score = 46.2 bits (108), Expect = 2e-05
Identities = 24/85 (28%), Positives = 48/85 (56%)
Frame = +2
Query: 76 FEDTWQEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWELGYGQEGSFSFPNVP 135
F+ +++ P E +G + + G G+ M GE+ L++ +LGYG++G S P +P
Sbjct: 311 FDSSFERNNPIEFELGTGQV-IKGWDQGLLGMCLGEKRKLKIPSKLGYGEQG--SPPTIP 481
Query: 136 PMADLVYEVELIGFDETKDGKARSD 160
A L+++ EL+G ++ G+ + +
Sbjct: 482 GGATLIFDAELVGVNDKSLGEGKGN 556
>TC208001 similar to UP|Q84LW7 (Q84LW7) Peptidylprolyl cis-trans isomerase ,
partial (97%)
Length = 857
Score = 45.1 bits (105), Expect = 5e-05
Identities = 39/135 (28%), Positives = 56/135 (40%)
Frame = +1
Query: 64 HYRAWSENTEHKFEDTWQEQRPTEMVIGKEKKEMTGLGIGVASMKAGERALLRVSWELGY 123
HY +T F+ T ++ IGK + I V +MK GE A + E Y
Sbjct: 262 HYEGTLADTGEVFDTTHEDNTIFSFEIGKGSV-IKAWEIAVKTMKVGEVAKITCKPEYAY 438
Query: 124 GQEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGAADRRKMDGNVLFQE 183
G GS P++PP A LV+EVEL+ K G+V +
Sbjct: 439 GSAGSP--PDIPPDATLVFEVELVACRPRKGSSL-------------------GSVSEER 555
Query: 184 NKLEEAMQQYEMAIA 198
+L+E +Q E+A A
Sbjct: 556 ARLDELKKQRELAAA 600
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,499,466
Number of Sequences: 63676
Number of extensions: 208509
Number of successful extensions: 1236
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of query: 358
length of database: 12,639,632
effective HSP length: 98
effective length of query: 260
effective length of database: 6,399,384
effective search space: 1663839840
effective search space used: 1663839840
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC136506.8