TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136472.17 - phase: 0 
         (124 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC226268 similar to UP|Q9SXL2 (Q9SXL2) Serine decarboxylase, par...   200  1e-52
TC210001 similar to UP|Q9MA74 (Q9MA74) Histidine decarboxylase (...   196  3e-51
AI965762                                                               50  3e-07
BE657248                                                               26  4.1
TC213732 weakly similar to UP|Q6ID69 (Q6ID69) At3g09032, partial...    26  4.1
CD407439                                                               25  7.0
TC205374 similar to UP|V714_ARATH (Q9FMR5) Vesicle-associated me...    25  7.0
AW432956                                                               25  9.2
TC212536 homologue to UP|P93484 (P93484) BP-80 vacuolar sorting ...    25  9.2

>TC226268 similar to UP|Q9SXL2 (Q9SXL2) Serine decarboxylase, partial (81%)
          Length = 1703

 Score =  200 bits (509), Expect = 1e-52
 Identities = 93/106 (87%), Positives = 101/106 (94%)
 Frame = +1

Query: 8    FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
            F+KEVQKCLRNAHYFK RL+EAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV
Sbjct: 1207 FQKEVQKCLRNAHYFKGRLVEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 1386

Query: 68   VVMPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
            VVMPN+TIEKLDDFLNEL++KRATWF+ G  QPYCI+SDVGE +CL
Sbjct: 1387 VVMPNITIEKLDDFLNELLEKRATWFQDGKDQPYCISSDVGEKNCL 1524


>TC210001 similar to UP|Q9MA74 (Q9MA74) Histidine decarboxylase (Serine
           decarboxylase), partial (42%)
          Length = 791

 Score =  196 bits (497), Expect = 3e-51
 Identities = 90/106 (84%), Positives = 98/106 (91%)
 Frame = +2

Query: 8   FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
           F+KEVQKCLRNAHYFKDRL++AGIGAMLNELSSTVVFERPHDE F+ KWQLAC+GN+AHV
Sbjct: 341 FQKEVQKCLRNAHYFKDRLVDAGIGAMLNELSSTVVFERPHDEGFVHKWQLACQGNVAHV 520

Query: 68  VVMPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
           VVMPNVTIEKLDDFLNELVQKRA WF  G  QPYCIASDVG+ +CL
Sbjct: 521 VVMPNVTIEKLDDFLNELVQKRAVWFRDGNCQPYCIASDVGQENCL 658


>AI965762 
          Length = 311

 Score = 50.1 bits (118), Expect = 3e-07
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = +1

Query: 72  NVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
           N+TI KLDD LNEL++K AT  E G   PYCI+ D G+ +CL
Sbjct: 10  NITIAKLDDSLNELLEKPATCVEDGEDHPYCISLDGGD*TCL 135


>BE657248 
          Length = 746

 Score = 26.2 bits (56), Expect = 4.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 90  ATWFEYGTFQPYCIASDVGENSCLAYVLIISNW 122
           +TWF Y  F   C+    G N    YVL+++NW
Sbjct: 488 STWFGY-QFSTSCL----GRNFNTRYVLLLANW 571


>TC213732 weakly similar to UP|Q6ID69 (Q6ID69) At3g09032, partial (18%)
          Length = 550

 Score = 26.2 bits (56), Expect = 4.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 73  VTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGEN 110
           +T E  + FL +L+    T     TF P C  +  GEN
Sbjct: 231 LTKEDEETFLEDLLLMETTLIALATFAPSCCKNLTGEN 118


>CD407439 
          Length = 413

 Score = 25.4 bits (54), Expect = 7.0
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 38  LSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVTIEKLDDFLNEL 85
           LSS  +FE+      IR WQL      + +++  N+  +    F+N +
Sbjct: 268 LSSAYIFEKDLHSSSIRAWQLNYWAT*SPLILTSNIKYQISGVFMNSV 411


>TC205374 similar to UP|V714_ARATH (Q9FMR5) Vesicle-associated membrane
           protein 714 (AtVAMP714), partial (98%)
          Length = 1159

 Score = 25.4 bits (54), Expect = 7.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 39  SSTVVFERPHDEEF-IRKWQLACKGNIAHVVVMPNVTIEKLDD 80
           +STVVF +PH + F +R+     +G + H  V   +  E ++D
Sbjct: 390 NSTVVFHKPHLDIFQVRERNSPSEGVVGHTDVGDAIRSEYVED 262


>AW432956 
          Length = 430

 Score = 25.0 bits (53), Expect = 9.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 4   LPYSFEKEVQKCLRNAHY 21
           +P +  K  +KCL+N HY
Sbjct: 185 VPVALHKAYEKCLQNVHY 238


>TC212536 homologue to UP|P93484 (P93484) BP-80 vacuolar sorting receptor,
           partial (30%)
          Length = 567

 Score = 25.0 bits (53), Expect = 9.2
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +3

Query: 61  KGNIAHVVVMPNVTIE------KLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
           KG+   V ++P + +       KL+     +++   + FE  T    C++SDV  N CL
Sbjct: 294 KGSRGDVTILPTLVVNNRQYRGKLEK--GAVLKAICSGFEETTEPTVCLSSDVETNECL 464


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.324    0.138    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,253,108
Number of Sequences: 63676
Number of extensions: 73846
Number of successful extensions: 413
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of query: 124
length of database: 12,639,632
effective HSP length: 85
effective length of query: 39
effective length of database: 7,227,172
effective search space: 281859708
effective search space used: 281859708
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)