BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.10 + phase: 0
(427 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206473 similar to GB|AAQ06244.1|33320973|AF487271 tubby-like p... 546 e-156
TC205439 similar to UP|Q8K0Y6 (Q8K0Y6) Tulp1 protein, partial (4%) 450 e-127
TC215259 similar to UP|Q8VY21 (Q8VY21) Tubby-like protein 3, par... 446 e-126
TC228691 similar to UP|Q8VY21 (Q8VY21) Tubby-like protein 3, par... 430 e-121
TC207090 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, parti... 403 e-113
TC215258 similar to UP|Q8VY21 (Q8VY21) Tubby-like protein 3, par... 395 e-110
TC204450 homologue to GB|AAM18187.1|33413451|AY092403 tubby-like... 353 8e-98
TC205440 similar to UP|TUB_HUMAN (P50607) Tubby protein homolog,... 301 3e-82
TC206472 similar to GB|AAP13398.1|30023730|BT006290 At1g25280 {A... 291 5e-79
TC205438 similar to UP|TUL1_HUMAN (O00294) Tubby related protein... 286 9e-78
TC218981 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, parti... 276 2e-74
TC207400 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, parti... 234 6e-62
BE659346 221 5e-58
TC209398 similar to GB|AAP13398.1|30023730|BT006290 At1g25280 {A... 197 1e-50
CA800259 192 3e-49
BE822877 181 6e-46
TC220558 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, parti... 167 8e-42
BI970616 similar to GP|7635492|emb tubby-like protein {Cicer ari... 160 1e-39
TC207399 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, parti... 149 2e-36
AW234547 145 3e-35
>TC206473 similar to GB|AAQ06244.1|33320973|AF487271 tubby-like protein
TULP10 {Arabidopsis thaliana;} , partial (51%)
Length = 1645
Score = 546 bits (1407), Expect = e-156
Identities = 272/286 (95%), Positives = 278/286 (97%), Gaps = 2/286 (0%)
Frame = +2
Query: 144 LSPA-LLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIY 202
LSPA LLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIY
Sbjct: 200 LSPAALLVENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIY 379
Query: 203 DTQPPCTSAHICPPGTGKTSRRF-SKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCI 261
DTQPP +SAHICPPGTGKTSRRF SKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHC+
Sbjct: 380 DTQPPYSSAHICPPGTGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCV 559
Query: 262 MHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFSKSLDHSIEFSSARFSEIGGSCNED 321
MHSIP SALDAGG+VPGQPEL+ RSLEDSFRSISFSKSLDHSIEFSS+RFSEIG SC ED
Sbjct: 560 MHSIPASALDAGGTVPGQPELLPRSLEDSFRSISFSKSLDHSIEFSSSRFSEIGESCIED 739
Query: 322 DDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAP 381
DDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIA+TQP AGAPTPSQPAP
Sbjct: 740 DDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPAP 919
Query: 382 PEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
PEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 920 PEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 1057
Score = 33.5 bits (75), Expect = 0.19
Identities = 21/43 (48%), Positives = 25/43 (57%), Gaps = 5/43 (11%)
Frame = +3
Query: 131 RDKSNLTYHLFLCLSPA-----LLVENGKFLLSAKRTRRTTYT 168
RDKSNLTYHLFL + A L +EN FLL + + T T
Sbjct: 156 RDKSNLTYHLFLNVL*ALQLC*LKMENSSFLLRGQGEQLTLST 284
>TC205439 similar to UP|Q8K0Y6 (Q8K0Y6) Tulp1 protein, partial (4%)
Length = 1017
Score = 450 bits (1158), Expect = e-127
Identities = 226/281 (80%), Positives = 247/281 (87%)
Frame = +1
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSFRSIVR+VRD FGSLSRRSF+V+L GH+ RGKS V +L DQP VIQNS WA+LPPE
Sbjct: 187 MSFRSIVREVRDGFGSLSRRSFEVRLPGHN-RGKSRSLVHELQDQPPVIQNSRWASLPPE 363
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LL DVI RLE SE+TWP RKHVVACA+VC+SWR MCK+IV SPEFCGK+TFPVSLKQPG
Sbjct: 364 LLRDVINRLEASESTWPGRKHVVACAAVCKSWREMCKEIVNSPEFCGKITFPVSLKQPGH 543
Query: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180
RDG IQCFIKRDKS LTYHLFL LSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNIS
Sbjct: 544 RDGPIQCFIKRDKSKLTYHLFLGLSPALLVENGKFLLSAKRTRRTTCTEYIISMDADNIS 723
Query: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNI 240
RSS+TYIGKLRSNFLGTKFIIYDTQPP +A + PPG SRRFSKKVSPKVPSGSYNI
Sbjct: 724 RSSSTYIGKLRSNFLGTKFIIYDTQPPYNNAMLSPPG---RSRRFSKKVSPKVPSGSYNI 894
Query: 241 AQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE 281
AQVTYELNVLGTRGPR+M+C M+SIP S+++ G VPGQPE
Sbjct: 895 AQVTYELNVLGTRGPRRMNCTMYSIPASSMEPNGVVPGQPE 1017
>TC215259 similar to UP|Q8VY21 (Q8VY21) Tubby-like protein 3, partial (85%)
Length = 1968
Score = 446 bits (1148), Expect = e-126
Identities = 222/380 (58%), Positives = 290/380 (75%), Gaps = 1/380 (0%)
Frame = +2
Query: 49 IQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGK 108
++ SCWAN+P ELL +V+ R+E SE+TWP RK VV+CA VC+SWR++ KDIV++PE K
Sbjct: 224 MRQSCWANMPQELLREVLLRIEASEDTWPPRKSVVSCAGVCRSWRHITKDIVKTPELSSK 403
Query: 109 LTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYT 168
+TFP+S+KQPGPR+ +++CFIKR++S TY+LFL L+ + L E+GKFLL+A++ RR T T
Sbjct: 404 ITFPISVKQPGPRENLLRCFIKRNRSTQTYYLFLSLT-STLAEDGKFLLAARKCRRPTCT 580
Query: 169 EYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFS-K 227
+Y+IS+DAD++S+ SN+Y+GKLRSNFLGTKF IYD+Q P T A I +++R + K
Sbjct: 581 DYIISLDADDMSKGSNSYVGKLRSNFLGTKFTIYDSQLPHTGAKIM---KSRSTRLVNLK 751
Query: 228 KVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSL 287
+VSPKVP+G+Y +A ++YELNVLG+RGPR+MHC+M SIP +A++ GG P Q E ++
Sbjct: 752 QVSPKVPTGNYPVAHISYELNVLGSRGPRRMHCVMDSIPATAIEPGGVAPTQTEFSLNNI 931
Query: 288 EDSFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCL 347
D F S F +S + E + + G + DG LVLKNK PRWHEQLQCWCL
Sbjct: 932 -DMFPSFPFFRSKSNRAE------NSMSGPLVDQKDGM---LVLKNKAPRWHEQLQCWCL 1081
Query: 348 NFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPL 407
NF GRVT+ASVKNFQL+AS + + PA PEHDKIILQFGKVGKD+FTMDYRYP+
Sbjct: 1082NFHGRVTIASVKNFQLVASAE--------NGPAGPEHDKIILQFGKVGKDLFTMDYRYPI 1237
Query: 408 SAFQAFAICLSSFDTKLACE 427
SAFQAFAICLSSFDTK+ACE
Sbjct: 1238SAFQAFAICLSSFDTKIACE 1297
>TC228691 similar to UP|Q8VY21 (Q8VY21) Tubby-like protein 3, partial (89%)
Length = 1397
Score = 430 bits (1105), Expect = e-121
Identities = 215/380 (56%), Positives = 283/380 (73%), Gaps = 1/380 (0%)
Frame = +3
Query: 49 IQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGK 108
++ SCWAN+PPELL DV+ R+E SE++WP++KHVVACA VC+SWR + K+IV+SP+ GK
Sbjct: 42 LKQSCWANMPPELLRDVLMRIEASEDSWPAQKHVVACAGVCRSWREIMKEIVKSPQLSGK 221
Query: 109 LTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYT 168
LTFP+SLKQPGPRD ++QC+IKR++SN TY+LFL L+ A + GKFLLSA++ RR T+T
Sbjct: 222 LTFPISLKQPGPRDSLLQCYIKRNRSNQTYYLFLGLNQA-STDEGKFLLSARKCRRATHT 398
Query: 169 EYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFS-K 227
+Y+IS++ D++SR S+TYIGKLRSNFLGTKF +YD PP A + +++R S K
Sbjct: 399 DYIISLNCDDVSRGSSTYIGKLRSNFLGTKFTVYDAHPPIYGAKVT---KSRSTRLVSLK 569
Query: 228 KVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSL 287
+VSP+VP+G+Y IA V+Y+LNVLG+RGPR M C+M +IP SA++ GG P Q + +H +
Sbjct: 570 QVSPRVPAGNYPIAHVSYDLNVLGSRGPRIMQCVMDAIPASAVEPGGVAPTQTQFLHSRI 749
Query: 288 EDSFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCL 347
D+ SI F +S ++ + +C + LVL+NK PRWHE LQCWCL
Sbjct: 750 -DTSPSIPFFRSKSTRMD----NLPTVPLTCQNEG-----TLVLRNKSPRWHEHLQCWCL 899
Query: 348 NFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPL 407
NF GRVTVASVKNFQL+AS P G +Q + +ILQFGKVGKD+FTMDY+YP+
Sbjct: 900 NFNGRVTVASVKNFQLVAS--PKNGVSEQAQ------ENVILQFGKVGKDVFTMDYQYPI 1055
Query: 408 SAFQAFAICLSSFDTKLACE 427
SAFQAFAICLSSFDTK+ACE
Sbjct: 1056SAFQAFAICLSSFDTKIACE 1115
>TC207090 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, partial (73%)
Length = 2133
Score = 403 bits (1035), Expect = e-113
Identities = 225/452 (49%), Positives = 288/452 (62%), Gaps = 25/452 (5%)
Frame = +2
Query: 1 MSFRSIVRDVRD---SFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSC---- 53
M FRSIVR++++ ++ RR + K H GKSH + + P +S
Sbjct: 563 MPFRSIVRELKEIGEGISNMYRRGGEAKHV--HRHGKSHIAPECSLPPPPSSSSSSSSSS 736
Query: 54 -----WANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGK 108
WANLPPELL D+I+RLE SE +WP+R+ +VACASVC+ WR + KD+V++PE CG
Sbjct: 737 SWQSRWANLPPELLLDIIQRLEASETSWPARRALVACASVCKLWREITKDVVKTPEQCGF 916
Query: 109 LTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYT 168
+TFP+SLKQPGPRD IQCFI+R++ TY L+L LSPAL + K LL+AK+ RR T T
Sbjct: 917 ITFPISLKQPGPRDSPIQCFIRRERMTSTYCLYLGLSPALSGDMSKLLLAAKKIRRATCT 1096
Query: 169 EYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKK 228
E++IS+ +D+ S +SNTY+GKLRSNFLGTKF I D +P ++ P R K+
Sbjct: 1097EFIISLVSDDFSWASNTYVGKLRSNFLGTKFTILDGEPAHETS--LPLNCKLQQRVHLKQ 1270
Query: 229 VSPK--VPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRS 286
V P + +Y +A V+YELNVL TRGPR+M C+MH IP A+ GG+ P +
Sbjct: 1271VLPNKVAAAANYKVATVSYELNVLRTRGPRRMRCMMHLIPIFAIQEGGNAPTPLKFTTNY 1450
Query: 287 LEDSFRSISFSKSL---------DHSIEFSSARFSEIGGSCN--EDDDGKMRPLVLKNKP 335
L D + + S +EF S G+ N E PLVLKNK
Sbjct: 1451LNDHASTTTEHASTTTPDSKGKKPEVVEFDST------GTANTPESIQRAREPLVLKNKA 1612
Query: 336 PRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVG 395
PRWHEQLQCWCLNF+GRVTVASVKNFQL+A+ +P + E +K+ILQFGK+G
Sbjct: 1613PRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNV------SAAEQEKVILQFGKIG 1774
Query: 396 KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
KD+FTMDYRYPLSAFQAFAICLSSFDTK ACE
Sbjct: 1775KDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 1870
>TC215258 similar to UP|Q8VY21 (Q8VY21) Tubby-like protein 3, partial (62%)
Length = 1594
Score = 395 bits (1015), Expect = e-110
Identities = 202/395 (51%), Positives = 275/395 (69%), Gaps = 1/395 (0%)
Frame = +3
Query: 34 KSHGSVQDLHDQPLVIQNSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWR 93
K+ S + Q ++ S WAN+P ELL +V+ R+E SE+TWP R+ VVAC VC++WR
Sbjct: 39 KNTQSTHMIEVQANAMEQSWWANMPHELLREVLLRIESSESTWPLRRSVVACGGVCRTWR 218
Query: 94 NMC-KDIVRSPEFCGKLTFPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVEN 152
+ K+IV+ P+F +TFP+SLKQPGPR+ ++QCFI+R+ ++ TY+LFL LS AL+ ++
Sbjct: 219 RLIVKEIVKPPQFSSNITFPISLKQPGPREHLLQCFIRRNSASQTYYLFLSLSSALVADD 398
Query: 153 GKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAH 212
GKFLL+A++ RR T T+Y+IS+DAD++SR SN Y+GKLRSNFLGTKF IYD + T
Sbjct: 399 GKFLLAARKFRRPTCTDYIISLDADDMSRESNAYVGKLRSNFLGTKFTIYDRKSCSTELV 578
Query: 213 ICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDA 272
+ S++ S + P+VP+G+Y +A ++YELNVLG+RGPR+MHC+M +IP SA++
Sbjct: 579 V-------NSKQVSPR--PRVPTGNYPVAHISYELNVLGSRGPRRMHCVMDTIPASAIEP 731
Query: 273 GGSVPGQPELIHRSLEDSFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLK 332
GG P S+ + S F ++ S+E S + G N+ DD LVL+
Sbjct: 732 GGVAVAAPSQTDFSVSNRDTSFPFFQTNSTSLENSIS-----GDQSNKKDD----VLVLR 884
Query: 333 NKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFG 392
NK RWHEQLQCWCLNF GRVT+ASVKNFQL S + + A + D++ILQFG
Sbjct: 885 NKAARWHEQLQCWCLNFHGRVTIASVKNFQLAVSPE--------NGHAGLQEDEVILQFG 1040
Query: 393 KVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
K+GKD+FTMDYRYP+SAFQAFAICLSSF T +ACE
Sbjct: 1041KIGKDLFTMDYRYPISAFQAFAICLSSFATTVACE 1145
>TC204450 homologue to GB|AAM18187.1|33413451|AY092403 tubby-like protein 7
{Arabidopsis thaliana;} , partial (66%)
Length = 1403
Score = 353 bits (906), Expect = 8e-98
Identities = 182/379 (48%), Positives = 251/379 (66%), Gaps = 2/379 (0%)
Frame = +1
Query: 51 NSCWANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLT 110
N+ W+++ PE+L +++RR++ +E WP+R++VVACA VC+ WR++ +++VR P GK+T
Sbjct: 220 NNGWSSMLPEILGEIVRRVDAAEEQWPNRQNVVACACVCKRWRDITREVVRVPSHTGKIT 399
Query: 111 FPVSLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEY 170
FP LKQPGPRD QC IKR+K T++L+L L+P+ + GKFLL+A+R R T+TEY
Sbjct: 400 FPSCLKQPGPRDVPHQCLIKRNKKTSTFYLYLALTPS-FTDKGKFLLAARRYRCGTHTEY 576
Query: 171 VISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRF-SKKV 229
+IS+DAD++S+ SN Y+GKL S+FLGT F IYD+QPP + A P +G+ SRRF SK++
Sbjct: 577 IISLDADDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHSGA---KPSSGRASRRFASKQI 747
Query: 230 SPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLED 289
SP+VP+G++ + QV+Y+ N+L +RGPR+M C + GS P H+
Sbjct: 748 SPQVPAGNFEVGQVSYKFNLLKSRGPRRMVCSLKCPVTPVSPTSGSSDSTPVNGHKM--- 918
Query: 290 SFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNF 349
H E +++ ++ +LKNK PRWHE LQCWCLNF
Sbjct: 919 ------------HDKEQAASGYT-----------------ILKNKAPRWHEHLQCWCLNF 1011
Query: 350 RGRVTVASVKNFQLIASTQPPAGAPTPSQP-APPEHDKIILQFGKVGKDMFTMDYRYPLS 408
GRVTVASVKNFQL+A+ SQP + + ++LQFGKVG D FTMDYR PLS
Sbjct: 1012HGRVTVASVKNFQLVATVD-------QSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLS 1170
Query: 409 AFQAFAICLSSFDTKLACE 427
AFQAFAICL+SF TKLACE
Sbjct: 1171AFQAFAICLTSFGTKLACE 1227
>TC205440 similar to UP|TUB_HUMAN (P50607) Tubby protein homolog, partial
(4%)
Length = 628
Score = 301 bits (772), Expect = 3e-82
Identities = 149/211 (70%), Positives = 179/211 (84%)
Frame = +2
Query: 151 ENGKFLLSAKRTRRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTS 210
ENGKFLLSAKRTRRTT TEY+ISMDADNISRS++TYIGKLRSNFLGTKFIIYDTQPP +
Sbjct: 2 ENGKFLLSAKRTRRTTCTEYIISMDADNISRSNSTYIGKLRSNFLGTKFIIYDTQPPYNN 181
Query: 211 AHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSAL 270
A + PPG ++ R +SKKVSPKVPSGSYNIAQ+TYELNVLGTRGPR+M+C MHSIP SAL
Sbjct: 182 AQLSPPG--RSRRFYSKKVSPKVPSGSYNIAQITYELNVLGTRGPRRMNCTMHSIPMSAL 355
Query: 271 DAGGSVPGQPELIHRSLEDSFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLV 330
+ G +VPGQPEL+ RSL+DSF+SIS ++S D+S EF S+R S+I + NE++ GK P++
Sbjct: 356 EPGCTVPGQPELLPRSLKDSFQSISSARSNDNSTEFISSRISDILVAGNEEEQGKGMPVI 535
Query: 331 LKNKPPRWHEQLQCWCLNFRGRVTVASVKNF 361
L+NK P WHEQLQCWCLN+R TVA V+ +
Sbjct: 536 LENKSPGWHEQLQCWCLNYRWMETVAYVRMY 628
>TC206472 similar to GB|AAP13398.1|30023730|BT006290 At1g25280 {Arabidopsis
thaliana;} , partial (46%)
Length = 722
Score = 291 bits (744), Expect = 5e-79
Identities = 141/150 (94%), Positives = 144/150 (96%)
Frame = +3
Query: 278 GQPELIHRSLEDSFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPR 337
GQPEL+ R LEDSFRSISFSKSLD SIEFSS+RFSEIG S EDDDGKMRPLVLKNKPPR
Sbjct: 15 GQPELLPRPLEDSFRSISFSKSLDRSIEFSSSRFSEIGESIIEDDDGKMRPLVLKNKPPR 194
Query: 338 WHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKD 397
WHEQLQCWCLNFRGRVTVASVKNFQLIA+TQPPAGAPTPSQPAPPEHDKIILQFGKVGKD
Sbjct: 195 WHEQLQCWCLNFRGRVTVASVKNFQLIAATQPPAGAPTPSQPAPPEHDKIILQFGKVGKD 374
Query: 398 MFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
MFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 375 MFTMDYRYPLSAFQAFAICLSSFDTKLACE 464
>TC205438 similar to UP|TUL1_HUMAN (O00294) Tubby related protein 1
(Tubby-like protein 1), partial (14%)
Length = 890
Score = 286 bits (733), Expect = 9e-78
Identities = 144/189 (76%), Positives = 163/189 (86%), Gaps = 7/189 (3%)
Frame = +3
Query: 246 ELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFSKSLDHSIE 305
ELNV G RGPR+M+C M+SIP S+++ G VPGQPEL+ R+LEDSFRSISFSKS+D+S E
Sbjct: 12 ELNVXGXRGPRRMNCTMYSIPASSMEPNGVVPGQPELLPRALEDSFRSISFSKSIDNSTE 191
Query: 306 FSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIA 365
FSS+RFS+I G+ ED++GK+RPLVLKNK PRWHEQLQCWCLNFRGRVTVASVKNFQLIA
Sbjct: 192 FSSSRFSDIMGTGIEDEEGKVRPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLIA 371
Query: 366 STQPPAGA-----PTPSQP--APPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLS 418
ST P A A PTPSQP + + DKIILQFGKVGKDMFTMDYRYPLSAFQAFAICL+
Sbjct: 372 STPPAAVAPTGTGPTPSQPTQSSSDPDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLT 551
Query: 419 SFDTKLACE 427
SFDTKLACE
Sbjct: 552 SFDTKLACE 578
>TC218981 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, partial (55%)
Length = 1076
Score = 276 bits (705), Expect = 2e-74
Identities = 149/266 (56%), Positives = 185/266 (69%), Gaps = 1/266 (0%)
Frame = +2
Query: 163 RRTTYTEYVISMDADNISRSSNTYIGKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTS 222
RR T T+++IS+ AD+ SRSSNTY+GKLRSNFLGTKF IYD+QPP A I P ++S
Sbjct: 2 RRATGTDFIISLVADDFSRSSNTYVGKLRSNFLGTKFTIYDSQPP-QGAAIQPDN--RSS 172
Query: 223 RRF-SKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPE 281
RRF SK+VSP+VP+ +Y ++ + YELNVL RGPR+MHC M+SI SA+ GG+ P P
Sbjct: 173 RRFHSKQVSPRVPACNYVVSTIAYELNVLRARGPRRMHCTMNSISVSAVQEGGNAP-TPT 349
Query: 282 LIHRSLEDSFRSISFSKSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQ 341
+ +++ F K + +A E+ ++D PLVLKNK PRWHEQ
Sbjct: 350 SFPQIIDEPFSPSPALKGKGPIRDLDNASLPELLPVQSQDS---AEPLVLKNKAPRWHEQ 520
Query: 342 LQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTM 401
LQCWCLNF GRVTVASVKNFQL+A+ P + E +K+ILQFGK+GKD+FTM
Sbjct: 521 LQCWCLNFNGRVTVASVKNFQLVAAVDPSHNV------SAAEQEKVILQFGKIGKDIFTM 682
Query: 402 DYRYPLSAFQAFAICLSSFDTKLACE 427
DYRYPLSAFQAFA CLSSFDTK ACE
Sbjct: 683 DYRYPLSAFQAFATCLSSFDTKPACE 760
>TC207400 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, partial (54%)
Length = 1006
Score = 234 bits (597), Expect = 6e-62
Identities = 126/242 (52%), Positives = 161/242 (66%), Gaps = 2/242 (0%)
Frame = +1
Query: 188 GKLRSNFLGTKFIIYDTQPPCTSAHICPPGTGKTSRRFSKKVSPKVPSGSYNIAQVTYEL 247
GKLRSNFLGTKF I+D+Q P A P + R SK+VSP++P+ +Y ++ V+YEL
Sbjct: 1 GKLRSNFLGTKFTIFDSQAPNDVA--IQPNCQSSRRFHSKQVSPRLPACNYLVSTVSYEL 174
Query: 248 NVLGTRGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFSKSLDHSIEFS 307
NVL TRGPR+M+C+M+SIP SA+ GG+ P P + ++ F K + +
Sbjct: 175 NVLCTRGPRRMYCVMNSIPVSAIQEGGNAP-TPASYPQIFDEHFSPSPALKEKVPVTDLN 351
Query: 308 SARFSE--IGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIA 365
SA SE + C+ + L LKN+ PRWHEQLQCWCLNF+GRV+VASVKNFQL+A
Sbjct: 352 SASLSEPPVSSQCSAEQ------LALKNRAPRWHEQLQCWCLNFKGRVSVASVKNFQLVA 513
Query: 366 STQPPAGAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLA 425
+ P + E +K+ILQFGK+GKD+FTMDY YPLS FQAFAICLSSFDTK A
Sbjct: 514 AVDPSHNI------SAEEQEKVILQFGKIGKDIFTMDYCYPLSTFQAFAICLSSFDTKPA 675
Query: 426 CE 427
CE
Sbjct: 676 CE 681
>BE659346
Length = 646
Score = 221 bits (563), Expect = 5e-58
Identities = 109/132 (82%), Positives = 121/132 (91%), Gaps = 2/132 (1%)
Frame = -2
Query: 298 KSLDHSIEFSSARFSEIGGSCNEDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 357
+S+D+S EFSS+RFS+I + NE++ GK RPLVLKNK PRWHEQLQCWCLNFRGRVTVAS
Sbjct: 645 RSIDNSTEFSSSRFSDIFVAGNEEEQGKGRPLVLKNKSPRWHEQLQCWCLNFRGRVTVAS 466
Query: 358 VKNFQLIASTQPP-AGAPTP-SQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAI 415
VKNFQLIA+TQPP AGAPTP SQPA +HDKIILQFGKVGKD+FTMDYRYPLSAFQAFAI
Sbjct: 465 VKNFQLIAATQPPAAGAPTPSSQPAQSDHDKIILQFGKVGKDIFTMDYRYPLSAFQAFAI 286
Query: 416 CLSSFDTKLACE 427
CL+SFDTKLACE
Sbjct: 285 CLTSFDTKLACE 250
>TC209398 similar to GB|AAP13398.1|30023730|BT006290 At1g25280 {Arabidopsis
thaliana;} , partial (36%)
Length = 650
Score = 197 bits (500), Expect = 1e-50
Identities = 96/110 (87%), Positives = 102/110 (92%), Gaps = 2/110 (1%)
Frame = +1
Query: 320 EDDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPA-GAPTP-S 377
E++ GK RPLVLKNK PRWHEQLQCWCLNFRGRVTVASVKNFQLIA+TQPPA GAP P S
Sbjct: 13 EEEQGKDRPLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPPATGAPMPSS 192
Query: 378 QPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
QPA +HDKIILQFGKVGKD+FTMDYRYPLSAFQAFAICL+SFDTKLACE
Sbjct: 193 QPAQSDHDKIILQFGKVGKDIFTMDYRYPLSAFQAFAICLTSFDTKLACE 342
>CA800259
Length = 432
Score = 192 bits (487), Expect = 3e-49
Identities = 92/123 (74%), Positives = 107/123 (86%)
Frame = +1
Query: 1 MSFRSIVRDVRDSFGSLSRRSFDVKLTGHHHRGKSHGSVQDLHDQPLVIQNSCWANLPPE 60
MSFRSIVRDVRD FGSLSRRSFDV+++G GK + V + H++ LVIQNS WA+LPPE
Sbjct: 73 MSFRSIVRDVRDGFGSLSRRSFDVRISGG---GKLNSLVHEAHERQLVIQNSRWASLPPE 243
Query: 61 LLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLKQPGP 120
LL DVI+RLEESE+TWP+RKHVVACA+VC+SWR MCK+IV SPEFCGK+TFPVSLKQPG
Sbjct: 244 LLCDVIKRLEESESTWPARKHVVACAAVCKSWREMCKEIVTSPEFCGKITFPVSLKQPGS 423
Query: 121 RDG 123
RDG
Sbjct: 424 RDG 432
>BE822877
Length = 723
Score = 181 bits (459), Expect = 6e-46
Identities = 94/176 (53%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Frame = -3
Query: 253 RGPRKMHCIMHSIPNSALDAGGSVPGQPELIHRSLEDSFRSISFSKSLDHSIEFSSARFS 312
RGPR+M C+MH IP SA+ GG+ P + + + + +I +K + F
Sbjct: 721 RGPRRMRCMMHLIPISAIQEGGNAPTPLKFTNYLNDYASTTIPDTKGKKPEV----VEFD 554
Query: 313 EIGGSCNEDDDGKMR-PLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPA 371
G + + R PL+LKNK PRWHEQLQCWCLNF+GRVTVASVKNFQL+A+ +P
Sbjct: 553 STGTDNTPESIQRAREPLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQ 374
Query: 372 GAPTPSQPAPPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
+ E +K+ILQFGK+GKD+FTMDYRYPLSAFQAFAICLSSFDTK ACE
Sbjct: 373 NV------SAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 224
>TC220558 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, partial (42%)
Length = 629
Score = 167 bits (423), Expect = 8e-42
Identities = 93/178 (52%), Positives = 122/178 (68%), Gaps = 4/178 (2%)
Frame = +2
Query: 1 MSFRSIVRDV---RDSFGSLSRRSFDVKLTGHH-HRGKSHGSVQDLHDQPLVIQNSCWAN 56
MS RSIVR++ RD GS S+R + K H R KSH + L IQ WAN
Sbjct: 104 MSLRSIVRELKEMRDGIGSTSKRGAESK---HRLSRTKSHVAPDVLATPFEPIQQGQWAN 274
Query: 57 LPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPVSLK 116
LP ELL D+I+R+EESE +WP+R VV CASVC+SWR++ ++IV++PE CG++TFP+SLK
Sbjct: 275 LPSELLLDIIQRVEESETSWPARAVVVFCASVCKSWRSITREIVKTPEQCGRITFPISLK 454
Query: 117 QPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISM 174
QPGPRD IQCFI+R+K TY L+ L P+ ++ K LL+AKR RR T T +VIS+
Sbjct: 455 QPGPRDSPIQCFIRRNKETSTYLLYFGLVPS-ENDSNKLLLAAKRIRRATGTGFVISL 625
>BI970616 similar to GP|7635492|emb tubby-like protein {Cicer arietinum},
partial (28%)
Length = 709
Score = 160 bits (404), Expect = 1e-39
Identities = 75/107 (70%), Positives = 85/107 (79%)
Frame = -2
Query: 321 DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPA 380
+ G PLVLKNK PRWHEQLQCWCLNF+GRVTVASVKNFQL+++ P +
Sbjct: 603 ESQGSAEPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVSAVDPSHNV------S 442
Query: 381 PPEHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
E +K+ILQFGK+GKD+FTMDYRYPLSAFQAFAICLSSFDTK ACE
Sbjct: 441 AAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE 301
>TC207399 similar to UP|Q9M3H9 (Q9M3H9) Tubby-like protein, partial (33%)
Length = 697
Score = 149 bits (376), Expect = 2e-36
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +3
Query: 324 GKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIASTQPPAGAPTPSQPAPPE 383
G L LKNK PRWHEQLQCWCLNF+GRV+VASVKNFQL+A+ P + E
Sbjct: 117 GSTEQLALKNKAPRWHEQLQCWCLNFKGRVSVASVKNFQLVAAVDPSHNI------SAEE 278
Query: 384 HDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 427
+K+ILQFGK+GKD+FTMDY YPLS FQAFAICLSSFDTK ACE
Sbjct: 279 QEKVILQFGKIGKDIFTMDYCYPLSTFQAFAICLSSFDTKPACE 410
>AW234547
Length = 406
Score = 145 bits (367), Expect = 3e-35
Identities = 67/122 (54%), Positives = 96/122 (77%)
Frame = +2
Query: 54 WANLPPELLFDVIRRLEESENTWPSRKHVVACASVCQSWRNMCKDIVRSPEFCGKLTFPV 113
WAN+P ELL +V+ +E SE+TWPS K VV+CA VC+SWR++ KDIV +PE K+T P+
Sbjct: 44 WANMPQELLQEVLLLIEASEDTWPSGKSVVSCAGVCRSWRHVTKDIVYAPELSSKITLPI 223
Query: 114 SLKQPGPRDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVIS 173
S+KQ PR+ +++CFI+R++S TY+L L L P+ L E+GKFLL+A+R RRTT ++Y+IS
Sbjct: 224 SVKQSDPRENLLRCFIERNQSTQTYYLXLSL-PSTLSEDGKFLLAARRCRRTTCSDYIIS 400
Query: 174 MD 175
+D
Sbjct: 401 LD 406
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,437,944
Number of Sequences: 63676
Number of extensions: 380684
Number of successful extensions: 3459
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 2921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3370
length of query: 427
length of database: 12,639,632
effective HSP length: 100
effective length of query: 327
effective length of database: 6,272,032
effective search space: 2050954464
effective search space used: 2050954464
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC136472.10