BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136451.6 + phase: 0 /pseudo
(210 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC228368 similar to UP|O49173 (O49173) MADS-box protein NMH 7, p... 198 1e-51
TC230606 weakly similar to UP|Q8L5M8 (Q8L5M8) MADS-box protein, ... 140 3e-34
TC228632 similar to UP|Q9ZTQ9 (Q9ZTQ9) MADS box protein 26, part... 135 1e-32
TC207360 similar to UP|Q8VWZ3 (Q8VWZ3) C-type MADS box protein, ... 114 4e-26
TC206232 homologue to UP|Q8H6F8 (Q8H6F8) MADS box protein GHMADS... 111 3e-25
TC220575 similar to UP|Q8LLR1 (Q8LLR1) MADS-box protein 3, parti... 111 3e-25
TC228392 similar to UP|Q8LLR0 (Q8LLR0) MADS-box protein 4, parti... 105 1e-23
TC222058 homologue to UP|AGL9_PETHY (Q03489) Agamous-like MADS b... 103 4e-23
TC208789 similar to UP|Q9SBQ1 (Q9SBQ1) MADS box transcription fa... 103 6e-23
TC222155 weakly similar to UP|O81662 (O81662) Transcription acti... 102 1e-22
TC207768 similar to UP|Q9ST53 (Q9ST53) MADS-box protein 4, parti... 102 2e-22
TC229190 similar to UP|Q9SEG4 (Q9SEG4) CAGL2, partial (86%) 101 3e-22
BM732175 similar to GP|15022157|gb MADS box protein-like protein... 97 7e-21
BU761215 homologue to PIR|T08039|T08 MADS-box protein - cucumber... 95 3e-20
AI959798 similar to GP|22091481|emb MADS box transcription facto... 92 2e-19
TC229191 homologue to UP|Q84U54 (Q84U54) MADS-RIN-like protein, ... 89 1e-18
AW706936 87 5e-18
CD398409 82 2e-16
BG651806 81 3e-16
TC234766 homologue to UP|Q7Y137 (Q7Y137) MADS-box protein PTM5, ... 80 9e-16
>TC228368 similar to UP|O49173 (O49173) MADS-box protein NMH 7, partial (97%)
Length = 1042
Score = 198 bits (504), Expect = 1e-51
Identities = 99/172 (57%), Positives = 131/172 (75%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
M RGKI+IK IEN TNRQVTYSKRRNG+FKKA+EL+VLCDAKVS+IMFS K+H+YI+P
Sbjct: 81 MARGKIQIKRIENNTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHQYISP 260
Query: 61 GLSTKKIIDQYQKTLGDIDLWRSHYEKMLENLKKLKDINHKLRRQIRHRIGEGGMELDDL 120
STK+ DQYQ TLG +DLW SHYE M ENLKKLK++N LR++IR R+G+ L++L
Sbjct: 261 STSTKQFFDQYQMTLG-VDLWNSHYENMQENLKKLKEVNRNLRKEIRQRMGDC---LNEL 428
Query: 121 SFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNLLLEL 172
+ L+ LEE+M+ + +RERK+ VI + DT RKK + ++++ LL +L
Sbjct: 429 GMEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLRDL 584
>TC230606 weakly similar to UP|Q8L5M8 (Q8L5M8) MADS-box protein, partial
(16%)
Length = 681
Score = 140 bits (354), Expect = 3e-34
Identities = 80/128 (62%), Positives = 92/128 (71%), Gaps = 24/128 (18%)
Frame = +3
Query: 107 RHRIGEGGMELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNG 166
RHRIGEG +++DD+SFQQLR+LEED+ SSI KIRERKFHVIKTRTDTCRKKV+SLEQMN
Sbjct: 15 RHRIGEG-LDMDDMSFQQLRTLEEDLVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNR 191
Query: 167 NLLLEL-----VRTLFL----------------SSYLYAFC-QHHSHLNLP--HHHGEEG 202
+LL EL + F+ +S LYAFC QHHSHLNLP H HGEE
Sbjct: 192 DLLFELKEKCAIHPQFILHDEGDEESAVALANGASTLYAFCHQHHSHLNLPSHHSHGEEP 371
Query: 203 YKNDDLRL 210
+K DDLRL
Sbjct: 372 FKTDDLRL 395
>TC228632 similar to UP|Q9ZTQ9 (Q9ZTQ9) MADS box protein 26, partial (82%)
Length = 880
Score = 135 bits (340), Expect = 1e-32
Identities = 70/168 (41%), Positives = 114/168 (67%)
Frame = +1
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKIEIK IEN +NRQVTYSKR+NGI KKA E++VLCDA+VSLI+F+ + KMH+YI+P
Sbjct: 55 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFAASGKMHDYISP 234
Query: 61 GLSTKKIIDQYQKTLGDIDLWRSHYEKMLENLKKLKDINHKLRRQIRHRIGEGGMELDDL 120
+ I+++Y KT G LW + +E + +++LK N ++ ++RH G+ +++ L
Sbjct: 235 STTLIDILERYHKTSGK-RLWDAKHENLNGEIERLKKENDSMQIELRHLKGD---DINSL 402
Query: 121 SFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNL 168
++++L +LE+ + + + +RE++ V + R+ + LE+ N L
Sbjct: 403 NYKELMALEDALETGLVSVREKQMDVYR----MLRRNDKILEEENREL 534
>TC207360 similar to UP|Q8VWZ3 (Q8VWZ3) C-type MADS box protein, partial
(88%)
Length = 1075
Score = 114 bits (284), Expect = 4e-26
Identities = 71/176 (40%), Positives = 106/176 (59%), Gaps = 8/176 (4%)
Frame = +2
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKIEIK IEN TNRQVT+ KRRNG+ KKA+ELSVLCDA+V+L++FS +++EY
Sbjct: 95 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANN 274
Query: 61 GLSTKKIIDQYQKTLGDIDLWRSHYEKMLE-NLKKLKDINHKLRRQI-------RHRIGE 112
S + I++Y+K + S+ E + E N + + + KLRRQI RH +GE
Sbjct: 275 --SVRATIERYKKA----NAAASNAESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGE 436
Query: 113 GGMELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNL 168
L LS ++L++LE + ++++R RK + + +K+ L+ N L
Sbjct: 437 A---LGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKREIELQNHNNYL 595
>TC206232 homologue to UP|Q8H6F8 (Q8H6F8) MADS box protein GHMADS-2, partial
(95%)
Length = 960
Score = 111 bits (277), Expect = 3e-25
Identities = 68/177 (38%), Positives = 103/177 (57%), Gaps = 7/177 (3%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKIEIK IEN TNRQVT+ KRRNG+ KKA+ELSVLCDA+V+LI+FS +++EY
Sbjct: 75 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 254
Query: 61 GLSTKKIIDQYQKTLGD-------IDLWRSHYEKMLENLKKLKDINHKLRRQIRHRIGEG 113
+ + I++Y+K D ++ +Y+ + KL+ L+ RH +G+
Sbjct: 255 NI--RSTIERYKKACSDHSSASTTTEINAQYYQ---QESAKLRQQIQMLQNSNRHLMGDA 419
Query: 114 GMELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNLLL 170
L L+ ++L+ LE + I +IR +K ++ + +K R +E N NL L
Sbjct: 420 ---LSTLTVKELKQLENRLERGITRIRSKKHEMLLAEIEYFQK--REIELENENLCL 575
>TC220575 similar to UP|Q8LLR1 (Q8LLR1) MADS-box protein 3, partial (44%)
Length = 851
Score = 111 bits (277), Expect = 3e-25
Identities = 65/174 (37%), Positives = 111/174 (63%), Gaps = 6/174 (3%)
Frame = +2
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGK+ ++ I+N NRQVT+SKRRNG+ KKA ELSVLCDA+++L++FS K+ +Y +
Sbjct: 158 MGRGKVVLERIQNKINRQVTFSKRRNGLLKKAFELSVLCDAEIALVIFSSRGKLFQYSST 337
Query: 61 GLSTKKIIDQYQK------TLGDIDLWRSHYEKMLENLKKLKDINHKLRRQIRHRIGEGG 114
++ +II++Y++ GD+ +S + + + L L+ + L+R R+ +GE
Sbjct: 338 DIN--RIIEKYRQCCFNMSQTGDVAEHQSE-QCLYQELLILRVKHESLQRTQRNLLGE-- 502
Query: 115 MELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNL 168
EL+ LS ++L SLE+ ++ ++ + R+ + +R D KV +LEQ+N +L
Sbjct: 503 -ELEPLSMKELHSLEKQLDRTLGQARKHLTQKLISRIDELHGKVHNLEQVNKHL 661
>TC228392 similar to UP|Q8LLR0 (Q8LLR0) MADS-box protein 4, partial (98%)
Length = 755
Score = 105 bits (263), Expect = 1e-23
Identities = 69/179 (38%), Positives = 106/179 (58%), Gaps = 11/179 (6%)
Frame = +1
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRG++E+K IEN NRQVT++KRRNG+ KKA+ELSVLCDA+V+LI+FS K +E+ +
Sbjct: 40 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKQYEFCS- 216
Query: 61 GLSTKKIIDQYQK-----------TLGDIDLWRSHYEKMLENLKKLKDINHKLRRQIRHR 109
G S K +++YQK T + L S ++ L +LK L+R R+
Sbjct: 217 GSSMLKTLERYQKCNYGAPEDNVATKEALVLELSSQQEYL----RLKARYEALQRSQRNL 384
Query: 110 IGEGGMELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNL 168
+GE +L LS ++L SLE ++SS+ +IR + + + ++K L + N +L
Sbjct: 385 MGE---DLGPLSSKELESLERQLDSSLKQIRSIRTQFMLDQLSDLQRKEHFLGESNRDL 552
>TC222058 homologue to UP|AGL9_PETHY (Q03489) Agamous-like MADS box protein
AGL9 homolog (Floral homeotic protein FBP2) (Floral
binding protein 2), partial (60%)
Length = 495
Score = 103 bits (258), Expect = 4e-23
Identities = 64/148 (43%), Positives = 95/148 (63%), Gaps = 5/148 (3%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRG++E+K IEN NRQVT++KRRNG+ KKA+ELSVLCDA+V+LI+FS K++E+ +
Sbjct: 60 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 239
Query: 61 GLSTKKIIDQYQK-TLGDIDLWRSHYEKM----LENLKKLKDINHKLRRQIRHRIGEGGM 115
S K +++YQK G + S E + + KLK L+R R+ +GE
Sbjct: 240 S-SMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGE--- 407
Query: 116 ELDDLSFQQLRSLEEDMNSSIAKIRERK 143
+L LS ++L SLE ++SS+ +IR +
Sbjct: 408 DLGPLSSKELESLERQLDSSLKQIRSTR 491
>TC208789 similar to UP|Q9SBQ1 (Q9SBQ1) MADS box transcription factor,
partial (72%)
Length = 995
Score = 103 bits (257), Expect = 6e-23
Identities = 68/181 (37%), Positives = 109/181 (59%), Gaps = 7/181 (3%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRG++E+K IEN QVT+SKRR+G+ KKA E+SVLCDA V+LI+FS K+ +Y
Sbjct: 219 MGRGRVELKRIENKIFMQVTFSKRRSGLLKKAREISVLCDADVALIVFSTKGKLLDYSNQ 398
Query: 61 GLSTKKIIDQYQK-------TLGDIDLWRSHYEKMLENLKKLKDINHKLRRQIRHRIGEG 113
T++I+++Y++ +GD + E + +KLK L+R R+ +GE
Sbjct: 399 P-CTERILERYERYSYAERQLVGDD---QPPNENWVIEHEKLKARVEVLQRNQRNFMGE- 563
Query: 114 GMELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNLLLELV 173
+LD L+ + L+SLE+ ++S++ IR RK + +KK R+L + N NLL + +
Sbjct: 564 --DLDSLNLRGLQSLEQQLDSALKHIRSRKNQAMNESISELQKKDRTLREHN-NLLSKKI 734
Query: 174 R 174
+
Sbjct: 735 K 737
>TC222155 weakly similar to UP|O81662 (O81662) Transcription activator,
partial (65%)
Length = 915
Score = 102 bits (255), Expect = 1e-22
Identities = 57/175 (32%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Frame = +2
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
M RGK+++K IE+ T+RQV +SKRR+G+ KKA+ELSVLCDA+V++I+FS+N +++E+ +
Sbjct: 152 MARGKVQLKKIEDTTSRQVAFSKRRSGLLKKAYELSVLCDAEVAVIVFSQNGRLYEFSSS 331
Query: 61 GLSTKKIIDQYQKTLGDI--DLWRSHYEKMLE-----NLKKLKDINHKLRRQIRHRIGEG 113
++ KI+++Y++ D+ + Y + L+ KK++ + H R +
Sbjct: 332 DMT--KILERYREHTKDVPASKFGDDYIQQLKLDSASLAKKIELLEHSKRELL------- 484
Query: 114 GMELDDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNL 168
G + S+ +L+ +EE + S+ ++R+RK + + D R + +L + N L
Sbjct: 485 GQSVSSCSYDELKGIEEQLQISLQRVRQRKTQLYTEQIDQLRSQESNLLKENAKL 649
>TC207768 similar to UP|Q9ST53 (Q9ST53) MADS-box protein 4, partial (27%)
Length = 951
Score = 102 bits (253), Expect = 2e-22
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 2/167 (1%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MG+ K+EIK IEN + RQ+T+SKRRNG+ KKA ELS+LCDAKV+L++FS K++E +
Sbjct: 111 MGKKKVEIKRIENKSTRQITFSKRRNGLMKKARELSILCDAKVALLIFSSTGKLYE-LCN 287
Query: 61 GLSTKKIIDQYQKTLGDIDLWRSHYEKMLENLKKLKDI--NHKLRRQIRHRIGEGGMELD 118
G S +++ QY LG E E + DI + I+ G EL+
Sbjct: 288 GDSLAEVVQQYWDHLGASGTDTKSQELCFE----IADIWSGSAFSQMIKRHFGVS--ELE 449
Query: 119 DLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMN 165
LS L LE+ ++++++IR K ++ +KK+ +LE+ N
Sbjct: 450 HLSVSDLMELEKLTHAALSRIRSAKMRLMMESVVNLKKKIEALEKTN 590
>TC229190 similar to UP|Q9SEG4 (Q9SEG4) CAGL2, partial (86%)
Length = 1062
Score = 101 bits (251), Expect = 3e-22
Identities = 59/139 (42%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Frame = +1
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRG++E+K IEN NRQVT++KRRNG+ KKA+ELSVLCDA+V+LI+FS K++E+ +
Sbjct: 313 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST 492
Query: 61 GLSTKKIIDQYQK-TLGDIDLWR--SHYEKMLENLKKLKDINHKLRRQIRHRIGEGGMEL 117
S K +++YQK + G +++ + E KLK L+R R+ +GE +L
Sbjct: 493 N-SMLKTLERYQKCSYGAVEVSKPGKELESSYREYLKLKARFESLQRTQRNLLGE---DL 660
Query: 118 DDLSFQQLRSLEEDMNSSI 136
L+ + L LE ++SS+
Sbjct: 661 GPLNTKDLEQLERQLDSSL 717
>BM732175 similar to GP|15022157|gb MADS box protein-like protein NGL9
{Medicago sativa}, partial (60%)
Length = 421
Score = 96.7 bits (239), Expect = 7e-21
Identities = 45/64 (70%), Positives = 56/64 (87%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKIEIK IEN +NRQVTYSKR+NGI KKA E++VLCDA+VSLI+F+ + KMH+YI+P
Sbjct: 39 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFAASGKMHDYISP 218
Query: 61 GLST 64
+T
Sbjct: 219 STTT 230
>BU761215 homologue to PIR|T08039|T08 MADS-box protein - cucumber, partial
(42%)
Length = 450
Score = 94.7 bits (234), Expect = 3e-20
Identities = 55/106 (51%), Positives = 71/106 (66%)
Frame = +1
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKIEIK IEN TNRQVT+ KRRNG+ KKA+ELSVLCDA+V+LI+FS +++EY
Sbjct: 142 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 321
Query: 61 GLSTKKIIDQYQKTLGDIDLWRSHYEKMLENLKKLKDINHKLRRQI 106
S K I++Y+K D S E + ++ D KLR+QI
Sbjct: 322 --SVKATIERYKKASSDSSGAGSASEANAQFYQQEAD---KLRQQI 444
>AI959798 similar to GP|22091481|emb MADS box transcription factor {Daucus
carota subsp. sativus}, partial (39%)
Length = 409
Score = 91.7 bits (226), Expect = 2e-19
Identities = 43/73 (58%), Positives = 60/73 (81%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGK+E+K IEN NRQVT++KRRNG+ KKA+ELSVLCDA+V+LI+FS K++E+ +
Sbjct: 90 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS- 266
Query: 61 GLSTKKIIDQYQK 73
G ST K +++Y +
Sbjct: 267 GHSTAKTLERYHR 305
>TC229191 homologue to UP|Q84U54 (Q84U54) MADS-RIN-like protein, partial
(32%)
Length = 558
Score = 89.4 bits (220), Expect = 1e-18
Identities = 42/73 (57%), Positives = 59/73 (80%)
Frame = +2
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRG++E+K IEN NRQVT++KRRNG+ KKA+ELSVLCDA+V+LI+FS K++E+ +
Sbjct: 320 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 499
Query: 61 GLSTKKIIDQYQK 73
S K +++YQK
Sbjct: 500 S-SMLKTLERYQK 535
>AW706936
Length = 422
Score = 87.0 bits (214), Expect = 5e-18
Identities = 41/73 (56%), Positives = 57/73 (77%)
Frame = +2
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKI I+ I+N T+RQVT+SKRRNG+ KKA ELS+LCDA+V L++FS K+++Y +
Sbjct: 131 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLMVFSSTGKLYDYAS- 307
Query: 61 GLSTKKIIDQYQK 73
S K +I++Y K
Sbjct: 308 -TSMKSVIERYNK 343
>CD398409
Length = 639
Score = 81.6 bits (200), Expect = 2e-16
Identities = 37/57 (64%), Positives = 46/57 (79%)
Frame = -1
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEY 57
MGRGKI I+ IEN TNRQVT+ KRRNG+ KK ELS+LCDA+V +I+FS K++EY
Sbjct: 549 MGRGKIPIRRIENSTNRQVTFCKRRNGLLKKTRELSILCDAEVGVIVFSSTGKLYEY 379
>BG651806
Length = 309
Score = 81.3 bits (199), Expect = 3e-16
Identities = 36/62 (58%), Positives = 50/62 (80%)
Frame = +3
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
MGRGKI I+ I+N T+RQVT+SKRRNG+ KKA ELS+LCDA+V L++FS K+++Y +
Sbjct: 120 MGRGKIAIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLMVFSSTGKLYDYAST 299
Query: 61 GL 62
+
Sbjct: 300 SM 305
>TC234766 homologue to UP|Q7Y137 (Q7Y137) MADS-box protein PTM5, partial
(33%)
Length = 490
Score = 79.7 bits (195), Expect = 9e-16
Identities = 39/73 (53%), Positives = 57/73 (77%)
Frame = +2
Query: 1 MGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYITP 60
M RGK +++ IEN T+RQVT+SKRRNG+ KKA ELSVLCDA+V+LI+FS K++E+ +
Sbjct: 239 MVRGKTQLRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFASS 418
Query: 61 GLSTKKIIDQYQK 73
S + I++Y++
Sbjct: 419 --SMQDTIERYRR 451
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,538,420
Number of Sequences: 63676
Number of extensions: 125565
Number of successful extensions: 1267
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of query: 210
length of database: 12,639,632
effective HSP length: 93
effective length of query: 117
effective length of database: 6,717,764
effective search space: 785978388
effective search space used: 785978388
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Medicago: description of AC136451.6