TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136287.2 + phase: 0 
         (365 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CO984089                                                              357  5e-99
BU578853                                                              100  8e-22
TC231289                                                               30  1.3
TC204879 similar to UP|Q8RX88 (Q8RX88) AT4g01320/F2N1_21, partia...    29  2.9
TC210603 similar to UP|Q9LHJ9 (Q9LHJ9) Protein phosphatase 2C (A...    28  5.0
AW707058 similar to GP|18377851|gb| AT3g56680/T8M16_10 {Arabidop...    28  5.0
TC211109 weakly similar to UP|O48631 (O48631) Ethylene-forming-e...    28  6.5
BI320256                                                               28  8.5
TC212618 weakly similar to UP|Q9FZI1 (Q9FZI1) F1O19.5 protein, p...    28  8.5

>CO984089 
          Length = 827

 Score =  357 bits (916), Expect = 5e-99
 Identities = 185/220 (84%), Positives = 197/220 (89%), Gaps = 2/220 (0%)
 Frame = -1

Query: 148 HGLDGIVLKVEDVEPMLELKEYFDRRTEESNVLNLTKATVTQIQVAGMGDRVCVDLCSLM 207
           HGLDGI++KVEDVE +LELKEYFDRR EESN+L+LTKATVT IQ AGMGDRVCVDLCSLM
Sbjct: 827 HGLDGIIMKVEDVEXVLELKEYFDRRMEESNLLSLTKATVTHIQAAGMGDRVCVDLCSLM 648

Query: 208 RPGEGLLVGSFARGLFLVHSECLESKLHCKQTFSGEC--VHAYIAVPGGRTSYLSELKSG 265
           RPGEGLLVGSFARGLFLVHSECLES     + F      VHAY+AVPGGRT YLSELKSG
Sbjct: 647 RPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYVAVPGGRTCYLSELKSG 468

Query: 266 KEVIVVDQQGRQRIAIVGRVKIESRPLILVEAKTDSDNQTISILLQNAETVALVCPVQGN 325
           KEVI+VD QGRQRIAIVGRVKIESRPLILVEAK +SDNQ+ISILLQNAETVALVC  QGN
Sbjct: 467 KEVIIVDHQGRQRIAIVGRVKIESRPLILVEAKIESDNQSISILLQNAETVALVCTPQGN 288

Query: 326 KLLKTAFPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK 365
            LLKT+ PVTSLKVGDE+LLRVQGGARHTGIEIQEFIVEK
Sbjct: 287 TLLKTSIPVTSLKVGDEILLRVQGGARHTGIEIQEFIVEK 168


>BU578853 
          Length = 451

 Score =  100 bits (250), Expect = 8e-22
 Identities = 48/67 (71%), Positives = 57/67 (84%)
 Frame = +2

Query: 3   SSSWTPLEDSGNKKSKKVWIWTKNKQVMTAAVERGWNTFIFPSNLPHLANDWSSIAVICP 62
           SS  + L++SG K+SK+VWIWT NKQVMTAAVERGWNTF+FPS+   LA+DWSSIAVICP
Sbjct: 254 SSMASSLDESG-KRSKRVWIWTSNKQVMTAAVERGWNTFVFPSHHRQLAHDWSSIAVICP 430

Query: 63  LFASEKE 69
           LF +E E
Sbjct: 431 LFVNEGE 451


>TC231289 
          Length = 694

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 214 LVGSFARGLFLVHSECLESKLHCKQTFSGECVHAYIAVP 252
           L+ S ++ LF     CL S LH     S  CVHA IA+P
Sbjct: 163 LIASSSQDLF---GRCLMSSLHIFSPNSNLCVHAAIAIP 270


>TC204879 similar to UP|Q8RX88 (Q8RX88) AT4g01320/F2N1_21, partial (56%)
          Length = 1057

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 22/70 (31%), Positives = 33/70 (46%), Gaps = 1/70 (1%)
 Frame = -1

Query: 229 CLESKL-HCKQTFSGECVHAYIAVPGGRTSYLSELKSGKEVIVVDQQGRQRIAIVGRVKI 287
           C+ SKL  CK   S +CVH+ + +P    S L    S   +IV         A++    I
Sbjct: 388 CISSKL*KCKNLHSNKCVHSMVELP---VSQLMGNNSNNFLIV--------FALLN*CVI 242

Query: 288 ESRPLILVEA 297
           +  PL+L E+
Sbjct: 241 KDNPLVLEES 212


>TC210603 similar to UP|Q9LHJ9 (Q9LHJ9) Protein phosphatase 2C (At3g12620),
           partial (75%)
          Length = 883

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 22/64 (34%), Positives = 29/64 (44%)
 Frame = +2

Query: 49  HLANDWSSIAVICPLFASEKEILDAQNKKVATIFDVSTPEELERLRPEDEQAENIVVNLL 108
           ++AN   S AV+  L  + KEI D Q          S  EEL  L P D Q   +V+   
Sbjct: 305 YIANAGDSRAVLGRLDEAMKEIKDIQLSVEHNASHASVREELHSLHPNDPQI--VVMKHQ 478

Query: 109 DWQV 112
            W+V
Sbjct: 479 VWRV 490


>AW707058 similar to GP|18377851|gb| AT3g56680/T8M16_10 {Arabidopsis
           thaliana}, partial (5%)
          Length = 352

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/47 (25%), Positives = 26/47 (54%)
 Frame = +2

Query: 266 KEVIVVDQQGRQRIAIVGRVKIESRPLILVEAKTDSDNQTISILLQN 312
           K++I+  +  +  +     VKI+  PLI ++ + +  NQT +++  N
Sbjct: 179 KKIIIRTRPNKNNLNNTNEVKIKKNPLISIK*RKEKYNQTQTLIFSN 319


>TC211109 weakly similar to UP|O48631 (O48631) Ethylene-forming-enzyme-like
           dioxygenase, partial (48%)
          Length = 774

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 21/82 (25%), Positives = 38/82 (45%), Gaps = 3/82 (3%)
 Frame = +3

Query: 271 VDQQGRQRIAIV--GRVKIESRPLILVEAKTDSDNQTISILLQNAETVALVCPVQGNKLL 328
           VDQ G Q + +       + SRP +++  K  +D   I++LLQ+ E   L   +  N + 
Sbjct: 156 VDQFGEQPLMLARFNFYPLCSRPDLVLGVKPHTDRSGITVLLQDKEVEGLQVLIDDNWIN 335

Query: 329 KTAFP-VTSLKVGDEVLLRVQG 349
               P    + +GD++ +   G
Sbjct: 336 VPTMPDALVVNLGDQMQIMSNG 401


>BI320256 
          Length = 109

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 219 ARGLFLVHSECLESKLHC 236
           A+GL  +H ECLE  LHC
Sbjct: 55  AKGLAYLHEECLEWILHC 108


>TC212618 weakly similar to UP|Q9FZI1 (Q9FZI1) F1O19.5 protein, partial (13%)
          Length = 367

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 12/46 (26%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
 Frame = +2

Query: 4   SSWTPLEDSGNKKSKKVW-----IWTKNKQVMTAAVERGWNTFIFP 44
           S+W    D    K   +W     +W+K   ++  A+++GW+  +FP
Sbjct: 80  STWWVFRDISRFKFTCLWFGT*YLWSKCDSMV*CAIDKGWSWDLFP 217


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.317    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,176,293
Number of Sequences: 63676
Number of extensions: 176794
Number of successful extensions: 872
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of query: 365
length of database: 12,639,632
effective HSP length: 99
effective length of query: 266
effective length of database: 6,335,708
effective search space: 1685298328
effective search space used: 1685298328
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)