BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135848.10 - phase: 0
(346 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC209664 UP|Q6T2Z7 (Q6T2Z7) Cyclin d2, partial (69%) 237 5e-63
AW507921 177 5e-45
TC208667 weakly similar to UP|Q84V88 (Q84V88) Cyclin D, partial ... 174 7e-44
TC207118 homologue to UP|Q6T2Z6 (Q6T2Z6) Cyclin d3, complete 167 8e-42
TC207620 similar to UP|Q8LK74 (Q8LK74) Cyclin D3.1 protein, part... 145 3e-35
BU927489 weakly similar to GP|22091622|em cyclin D2 {Daucus caro... 141 4e-34
BG726093 similar to GP|4160298|emb cyclin D2.1 protein {Nicotian... 135 3e-32
TC210501 homologue to UP|Q6T2Z7 (Q6T2Z7) Cyclin d2, partial (46%) 133 1e-31
TC220016 similar to UP|Q7XAB6 (Q7XAB6) Cyclin D3-1, partial (51%) 132 2e-31
CO984494 115 3e-26
TC211336 weakly similar to UP|Q8GVD9 (Q8GVD9) Cyclin D3, partial... 111 4e-25
TC212034 similar to UP|Q7XAB6 (Q7XAB6) Cyclin D3-1, partial (9%) 89 3e-18
BQ630058 weakly similar to GP|3608179|dbj| cyclin D {Pisum sativ... 88 6e-18
TC220723 similar to UP|Q8L6U0 (Q8L6U0) Cyclin D2, partial (11%) 73 2e-13
TC230198 weakly similar to UP|Q7XAB7 (Q7XAB7) Cyclin D3-2, parti... 73 2e-13
BM519656 72 3e-13
CO980397 69 3e-12
TC219133 UP|Q39879 (Q39879) Mitotic cyclin a2-type, complete 64 1e-10
AW756565 similar to PIR|T07675|T07 cyclin a2-type mitosis-speci... 61 7e-10
TC232525 homologue to UP|Q39880 (Q39880) Mitotic cyclin b1-type,... 57 1e-08
>TC209664 UP|Q6T2Z7 (Q6T2Z7) Cyclin d2, partial (69%)
Length = 903
Score = 237 bits (605), Expect = 5e-63
Identities = 128/238 (53%), Positives = 172/238 (71%), Gaps = 14/238 (5%)
Frame = +2
Query: 115 LSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAK 174
LS+NYLDRFL ++ P+G WT+QLLAVAC SLAAK++E +VP S+DLQVGE KF+F+AK
Sbjct: 11 LSINYLDRFLCAYELPKGRVWTMQLLAVACVSLAAKLDETEVPLSLDLQVGESKFLFEAK 190
Query: 175 TIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDF 234
TIQRMEL++LS+L W+M+A+TP +F+DYFL KI+ ++ P +S I RS+QLI + +GIDF
Sbjct: 191 TIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDF 370
Query: 235 LEFRSSEIAAAVAIS----------LKELPTQEVDKAITDFF-IVDKERVLKCVELIRDL 283
LEF+ SEIAAAV S + E T + KAI+ V+KER+LKCV++I++L
Sbjct: 371 LEFKPSEIAAAVKPSEIAAAVAMYVMGETQTVDTGKAISVLIQHVEKERLLKCVQMIQEL 550
Query: 284 SLIKVGGNNFASFV---PQSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPNAKRMKFD 338
S + ++ V PQSPIGVLDA C ++KSD+ SC NSSH+SP AKR K +
Sbjct: 551 SCNSGSAKDSSASVTCLPQSPIGVLDALCFNYKSDDTNASSCVNSSHNSPVAKRRKLN 724
>AW507921
Length = 445
Score = 177 bits (450), Expect = 5e-45
Identities = 89/145 (61%), Positives = 118/145 (81%)
Frame = +2
Query: 115 LSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAK 174
LS+NYLDRFL ++ P+G WT+QLLAVAC SLAAK++E +VP S+DLQVGE KF+F+AK
Sbjct: 8 LSINYLDRFLFAYELPKGRVWTMQLLAVACLSLAAKLDETEVPLSLDLQVGESKFLFEAK 187
Query: 175 TIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDF 234
TIQRMEL++LS+L W+M+A+TP +F+DYFL KI+ ++ P +S I RS+QLI + +GIDF
Sbjct: 188 TIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPLRSSIMRSIQLISSTARGIDF 367
Query: 235 LEFRSSEIAAAVAISLKELPTQEVD 259
LEF+ SEIAAAVA+ + TQ VD
Sbjct: 368 LEFKPSEIAAAVAMYVMG-ETQTVD 439
>TC208667 weakly similar to UP|Q84V88 (Q84V88) Cyclin D, partial (24%)
Length = 1149
Score = 174 bits (440), Expect = 7e-44
Identities = 112/293 (38%), Positives = 158/293 (53%), Gaps = 10/293 (3%)
Frame = +3
Query: 54 FVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSL 113
F+ E + +++ E H+P +DY R R +D++ R +A++WI K HAYY F P++
Sbjct: 153 FLCADEAAIAGLLDAEPHHMPEKDYPRRCRDRSVDVTARLDAVNWILKVHAYYEFSPVTA 332
Query: 114 CLSVNYLDRFLSVFQFPR-GVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQ 172
LSVNY DRFLS P+ W QLL+VAC SLAAKMEE VP +DLQ+ +PKFVFQ
Sbjct: 333 FLSVNYFDRFLSRCSLPQQSGGWAFQLLSVACLSLAAKMEESHVPFLLDLQLFQPKFVFQ 512
Query: 173 AKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGI 232
KT QRMEL ++S+L W++R++TP ++ YF K+ I + LIL+ + I
Sbjct: 513 PKTDQRMELWVMSNLKWRLRSVTPFDYLHYFFTKLPSS---SSQSITTASNLILSTTRPI 683
Query: 233 DFLEFRSSEIAAAVAI--SLKELPTQEVDKAITDFFIVDKERVLKCVELIR----DLSLI 286
+FL F S +AAA + + +LP D+ V+ E V C +L+ D
Sbjct: 684 NFLGFAPSTVAAAAVLCSANGQLPLSFHDR-------VNDEMVRCCHQLMEEYVVDTCPA 842
Query: 287 KVGGNNFASFVPQSPIGVLDAGCMSFKSDELTNGSCPNSS---HSSPNAKRMK 336
V P SP+GVLDA T GSC S + P KR++
Sbjct: 843 SVKARITEPAPPSSPVGVLDAA---------TCGSCDTPSDRNFAGPPNKRLR 974
>TC207118 homologue to UP|Q6T2Z6 (Q6T2Z6) Cyclin d3, complete
Length = 1763
Score = 167 bits (422), Expect = 8e-42
Identities = 100/261 (38%), Positives = 144/261 (54%), Gaps = 13/261 (4%)
Frame = +3
Query: 92 RREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKM 151
RREA++WI K +A+YGF L+ L+V YLDRFL F F R W +QL+AV C SLAAK+
Sbjct: 549 RREAVEWILKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKV 728
Query: 152 EEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEK 211
EE +VP +DLQV + K+VF+AKTIQRMEL++LS+L WKM +TP SF+D+ + ++ +
Sbjct: 729 EETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKT 908
Query: 212 YPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAI----SLKELPTQEVDKAITDFFI 267
+ + R L+L+++ F+ S +A A + +K E +
Sbjct: 909 HLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIKHNGGMEYKNQLLSVLK 1088
Query: 268 VDKERVLKCVELIRDLSLI-KVGGNNFASF-------VPQSPIGVLDAG-CMSFKSDELT 318
+ KE+V +C I LS K G NN + +P SP GV+DA C +D
Sbjct: 1089ISKEKVDECYNAILQLSKANKYGHNNINNTSKRKYEQIPSSPSGVIDAAFCSDGSNDSWA 1268
Query: 319 NGSCPNSSHSSPNAKRMKFDG 339
GS S P K+ + G
Sbjct: 1269VGSSLLYSPPEPLFKKSRTQG 1331
>TC207620 similar to UP|Q8LK74 (Q8LK74) Cyclin D3.1 protein, partial (51%)
Length = 1405
Score = 145 bits (365), Expect = 3e-35
Identities = 92/258 (35%), Positives = 142/258 (54%), Gaps = 23/258 (8%)
Frame = +3
Query: 92 RREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKM 151
RREA++W+ K +++Y F L+ LSVNY DRFL F+F W VQL AVAC S+AAK+
Sbjct: 279 RREAVEWMLKVNSHYSFSALTAVLSVNYFDRFLFSFRFQNDKPWMVQLAAVACLSIAAKV 458
Query: 152 EEVKVPQSVDL-QVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCE 210
EE VP +DL QV E +++F+AKTI++ME+++LS+LGWKM TP SF+DYF ++ +
Sbjct: 459 EETHVPFLIDLQQVDESRYLFEAKTIKKMEILVLSTLGWKMNPPTPLSFLDYFTRRLGSK 638
Query: 211 KYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAAA----VAISLKELPTQEVDKAITDFF 266
+ +++S ++L+++ F+ + S +A A V S++ E +
Sbjct: 639 DHLCWEFLSKSQGVLLSLLGDSRFMSYLPSVLATATMMHVVKSVEPGLEAEYKSQLFGIL 818
Query: 267 IVDK---ERVLKCVELI---------------RDLSLIKVGGNNFASFVPQSPIGVLDAG 308
+DK E+V C +L+ + K G +P SP GV+D
Sbjct: 819 RIDKEKPEKVNSCCKLLLEVWSGYEEEEQEQGKQCMKRKFG----IGSIPGSPNGVMD-- 980
Query: 309 CMSFKSDELTNGSCPNSS 326
+SF D +N S +SS
Sbjct: 981 -VSFSCDSSSNDSSVSSS 1031
>BU927489 weakly similar to GP|22091622|em cyclin D2 {Daucus carota}, partial
(27%)
Length = 449
Score = 141 bits (356), Expect = 4e-34
Identities = 81/149 (54%), Positives = 111/149 (74%), Gaps = 8/149 (5%)
Frame = +3
Query: 161 DLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIAR 220
DLQVGE K++F+AKTIQRMEL++LS+L W+M+A+TP SFID+FL KI+ ++ P + I +
Sbjct: 3 DLQVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQ 182
Query: 221 SVQLILNIIKGIDFLEFRSSEIAAAVAIS-LKELPTQEVDKAITDFF-IVDKERVLKCVE 278
S+QLIL+ ++GIDFLEFR SEIAAAVAIS + E T +KAI+ +V+KERVLKCV+
Sbjct: 183 SIQLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVHTEKAISVLIQLVEKERVLKCVK 362
Query: 279 LIRDLSLIKVGGNNFAS------FVPQSP 301
+I++L+ G AS VP+SP
Sbjct: 363 MIQELASNSGGSAKGASASVSVPSVPESP 449
>BG726093 similar to GP|4160298|emb cyclin D2.1 protein {Nicotiana tabacum},
partial (29%)
Length = 412
Score = 135 bits (340), Expect = 3e-32
Identities = 62/78 (79%), Positives = 71/78 (90%)
Frame = +3
Query: 87 LDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFS 146
LDLSVR+EALDWIWKAHAY+ FGP SLCLSVNYLDRFLSV++ PRG +W++QLLAVAC S
Sbjct: 3 LDLSVRKEALDWIWKAHAYFDFGPCSLCLSVNYLDRFLSVYELPRGKSWSMQLLAVACLS 182
Query: 147 LAAKMEEVKVPQSVDLQV 164
+AAKMEE+KVP VDLQV
Sbjct: 183 IAAKMEEIKVPPCVDLQV 236
Score = 47.0 bits (110), Expect = 1e-05
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +1
Query: 145 FSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWK 190
F LA+ + + VGEPKF F+AK IQRMEL++LS+L WK
Sbjct: 274 FGLASTFSSDFITFVCNWLVGEPKFAFEAKDIQRMELLVLSTLRWK 411
>TC210501 homologue to UP|Q6T2Z7 (Q6T2Z7) Cyclin d2, partial (46%)
Length = 629
Score = 133 bits (334), Expect = 1e-31
Identities = 79/160 (49%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Frame = +2
Query: 185 SSLGWKMRALTPCSFIDYFLAKISCEKYPDKSLIARSVQLILNIIKGIDFLEFRSSEIAA 244
S+L W+M+A+ DY L KI+ ++ P + I RS+QLI + +GIDFLEF+ SEIAA
Sbjct: 2 STLXWRMQAIXXXXXXDYXLXKINDDQSPLRXSIMRSIQLISSTARGIDFLEFKPSEIAA 181
Query: 245 AVAI-SLKELPTQEVDKAITDFFI--VDKERVLKCVELIRDLSLIKVGGNNFASFV---P 298
AVA+ + E T + KAI+ F I V+KER+LKCV++I++LS + ++ V P
Sbjct: 182 AVAMYVMGETQTVDTGKAIS-FLIQHVEKERLLKCVQMIQELSCNSGSAKDSSASVTCLP 358
Query: 299 QSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPNAKRMKFD 338
QSPIGVLDA C S+KSD+ GSC NSSH+SP AKR K +
Sbjct: 359 QSPIGVLDALCFSYKSDDTNAGSCVNSSHNSPVAKRRKLN 478
>TC220016 similar to UP|Q7XAB6 (Q7XAB6) Cyclin D3-1, partial (51%)
Length = 921
Score = 132 bits (332), Expect = 2e-31
Identities = 84/242 (34%), Positives = 125/242 (50%), Gaps = 21/242 (8%)
Frame = +1
Query: 101 KAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVT--------WTVQLLAVACFSLAAKME 152
K +A Y F L+ L+VNYLDRFL F+F W QL AVAC SLAAK E
Sbjct: 4 KVNARYSFSTLTAVLAVNYLDRFLFSFRFQNDNNDNNNNNNPWLTQLSAVACLSLAAKFE 183
Query: 153 EVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKY 212
E VP +DLQV E K++F+AKT++RME+++LS+LGWKM +TP SF+DY K+ + Y
Sbjct: 184 ETHVPLFIDLQVEESKYLFEAKTVKRMEILVLSTLGWKMNPVTPLSFLDYITRKLGLKGY 363
Query: 213 PDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAISLKELPTQEVDKAITDFFI----V 268
+ R ++L++ F+ + S +A A + + + D + +
Sbjct: 364 LCWEFLRRCETVLLSVFADSRFMGYLPSVLATATVMRVVNTVEPRLGVEYQDQLLGILGI 543
Query: 269 DKERVLKCVELIRDL--------SLIKVGGNNFASFVP-QSPIGVLDAGCMSFKSDELTN 319
DKE+V +C L+ ++ K+ S +P S GV++ SF D +N
Sbjct: 544 DKEKVEECYNLMMEVVSGYDEEGKRSKLKKRKLESIIPCSSQNGVMEG---SFSCDSSSN 714
Query: 320 GS 321
S
Sbjct: 715 ES 720
>CO984494
Length = 710
Score = 115 bits (288), Expect = 3e-26
Identities = 63/100 (63%), Positives = 79/100 (79%), Gaps = 4/100 (4%)
Frame = -1
Query: 241 EIAAAVAISL-KELPTQEVDKAITDFFIVDKERVLKCVELIRDLSLIKVGGN---NFASF 296
EIAAAVAIS+ +E+ +E+DK +T FFIV KER+LKC+ELI+DLSLI+ N N ASF
Sbjct: 710 EIAAAVAISVSREMQAEEIDKTLTCFFIVGKERILKCLELIKDLSLIQDSANLGTNLASF 531
Query: 297 VPQSPIGVLDAGCMSFKSDELTNGSCPNSSHSSPNAKRMK 336
VPQSPIGVLDA C+S SDELT GS +SS ++PN+KR +
Sbjct: 530 VPQSPIGVLDAACLSSISDELTVGSYTDSSLNTPNSKRRR 411
>TC211336 weakly similar to UP|Q8GVD9 (Q8GVD9) Cyclin D3, partial (28%)
Length = 1351
Score = 111 bits (278), Expect = 4e-25
Identities = 59/148 (39%), Positives = 89/148 (59%)
Frame = +2
Query: 85 GDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVAC 144
GD R EA++WI K A GF + LSV Y DRFLS +W ++LL++AC
Sbjct: 44 GDWVKRARVEAINWILKTRATLGFRFETAYLSVTYFDRFLSRRSIDSEKSWAIRLLSIAC 223
Query: 145 FSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFL 204
SLAAKMEE VP + ++ + + F+ K IQ+MEL++LS+L W+M +TP F+ YF+
Sbjct: 224 LSLAAKMEECNVPGLSEFKLDD--YSFEGKVIQKMELLVLSTLEWEMGIITPFDFLSYFI 397
Query: 205 AKISCEKYPDKSLIARSVQLILNIIKGI 232
K C++ P + +++QLI +K +
Sbjct: 398 TKF-CKESPPSPIFYKTMQLIFTTMKAL 478
>TC212034 similar to UP|Q7XAB6 (Q7XAB6) Cyclin D3-1, partial (9%)
Length = 698
Score = 89.0 bits (219), Expect = 3e-18
Identities = 52/129 (40%), Positives = 79/129 (60%), Gaps = 4/129 (3%)
Frame = +1
Query: 69 EKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQ 128
E DH+P +Y L+ D D+SVRR+ + I + F P+ L++NYLDRFL+
Sbjct: 319 ESDHIPPPNYCQSLKASDFDISVRRDVVSLISQLSCT--FDPVLPYLAINYLDRFLANQG 492
Query: 129 FPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQV----GEPKFVFQAKTIQRMELMIL 184
+ W +LLAV+CFSLAAKM + + + D+QV G+ +F+ +TIQRME ++L
Sbjct: 493 ILQPKPWANKLLAVSCFSLAAKMLKTEY-SATDVQVLMNHGDGGAIFETQTIQRMEGIVL 669
Query: 185 SSLGWKMRA 193
+L W+MR+
Sbjct: 670 GALQWRMRS 696
>BQ630058 weakly similar to GP|3608179|dbj| cyclin D {Pisum sativum}, partial
(19%)
Length = 433
Score = 87.8 bits (216), Expect = 6e-18
Identities = 43/82 (52%), Positives = 56/82 (67%)
Frame = +2
Query: 89 LSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLA 148
++ R EA++WI K HAYY F P + LSV+Y +RFL F + W +QLL+V C SLA
Sbjct: 188 INAREEAINWILKVHAYYSFKPETAYLSVDYFNRFLLSHTFTQDKAWPLQLLSVTCLSLA 367
Query: 149 AKMEEVKVPQSVDLQVGEPKFV 170
AKMEE KVP +DLQV E +F+
Sbjct: 368 AKMEESKVPLLLDLQVIESRFL 433
>TC220723 similar to UP|Q8L6U0 (Q8L6U0) Cyclin D2, partial (11%)
Length = 614
Score = 73.2 bits (178), Expect = 2e-13
Identities = 38/54 (70%), Positives = 44/54 (81%), Gaps = 4/54 (7%)
Frame = +3
Query: 296 FVPQSPIGVLDAGCMSFKSDELTNG-SCPNSSHSSPN---AKRMKFDGPSSGTS 345
+VPQSPIGVLDAGC+S+KSDELT G SCPNSSH++ N KR K D PS+GTS
Sbjct: 42 YVPQSPIGVLDAGCLSYKSDELTVGSSCPNSSHNTSNPNPTKRSKPDEPSNGTS 203
>TC230198 weakly similar to UP|Q7XAB7 (Q7XAB7) Cyclin D3-2, partial (56%)
Length = 913
Score = 72.8 bits (177), Expect = 2e-13
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Frame = +1
Query: 153 EVKVPQSVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISCEKY 212
E VP QV E +FVF KTIQRMEL++LS+L W+M +TP ++ + ++ +
Sbjct: 1 ETHVPLXXXXQVEESRFVFXXKTIQRMELLVLSTLKWRMHPVTPIXXFEHIVRRLGLKSR 180
Query: 213 PDKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAIS-LKEL----PTQEVDKAITDFFI 267
+ R +++LN+I + + S +AAA I +KE+ T+ +D+ +
Sbjct: 181 LHWEFLWRCERVLLNVIADSRVMSYLPSTLAAATMIRVIKEIESFNATEYIDQ-LLGLLK 357
Query: 268 VDKERVLKCVELIRDL-----SLIKVGGNNFASFVPQSPIGVLDAGCMSFKSDELTNGSC 322
+ +E+V +C ++I+ L + + P SP V DA S++ S
Sbjct: 358 ISEEQVNQCYKIIQKLLGCYEGIYSLHQKRKRLSEPGSPGAVTDASFSCDSSNDSWTVSS 537
Query: 323 PNSSHSSPNAKRMK 336
S P KR K
Sbjct: 538 SVSLSLEPLLKRRK 579
>BM519656
Length = 428
Score = 72.4 bits (176), Expect = 3e-13
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Frame = +2
Query: 135 WTVQLLAVACFSLAAKMEEVKVPQSVDLQV----GEPKFVFQAKTIQRMELMILSSLGWK 190
W ++L+AV+C SLA KM + P + D+Q + +F+ +TIQRME +IL +L W+
Sbjct: 14 WVLRLIAVSCISLAVKMMRTEYPFT-DVQALLNQSDGGIIFETQTIQRMEALILGALQWR 190
Query: 191 MRALTPCSFIDYFLAKISCEKYP-DKSLIARSVQLILNIIKGIDFLEFRSSEIAAAVAI 248
MR++TP SF+ +F+A + + P + L R+ ++I + I F+ S IAA+ +
Sbjct: 191 MRSITPFSFVAFFIALMGLKDLPMGQVLKNRASEIIFKSQREIRLWGFKPSIIAASALL 367
>CO980397
Length = 664
Score = 68.9 bits (167), Expect = 3e-12
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Frame = -3
Query: 174 KTIQRMELMILSSLGWKMRALTPCSFIDYFLAKISC--EKYPDKSLIARSV-QLILNIIK 230
KT+QRMEL++++SL W++R +TP F+ F++K+ C + D S I V +I+
Sbjct: 656 KTVQRMELLVMASLKWRLRTITPFDFVHLFISKLLCSASTWGDLSYIVSLVSDVIIRTCL 477
Query: 231 GIDFLEFRSSEIAAAVAISLKELPTQEVD--KAITDFFIVDKERVLKCVELIRDLSLIK- 287
+DFLEF S IAAA +L + Q VD K+ + E V KC +L++ +I+
Sbjct: 476 VMDFLEFSPSTIAAA---ALLWVTNQCVDDKKSYCLHKNISIEMVKKCYKLMKQKLIIRR 306
Query: 288 --VGGNNFASFVPQSPIGVLD-AGCMSFKSD 315
+ + +P+SP VLD A M SD
Sbjct: 305 SELYWPKISQLLPRSPTCVLDHAAAMQESSD 213
>TC219133 UP|Q39879 (Q39879) Mitotic cyclin a2-type, complete
Length = 1804
Score = 63.9 bits (154), Expect = 1e-10
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Frame = +2
Query: 41 VNLDNVGSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIW 100
VN+DN +D LC + I K + E P D++ +++ +++ S+R +DW+
Sbjct: 653 VNVDNNYADPQLCATFACD-IYKHLRASEAKKRPSTDFMEKIQK-EINSSMRAILIDWLV 826
Query: 101 KAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSV 160
+ Y P +L L+VNY+DR+LS R +QLL VA +A+K EE+ PQ
Sbjct: 827 EVAEEYRLVPDTLYLTVNYIDRYLSGNVMNR---QRLQLLGVASMMIASKYEEICAPQVE 997
Query: 161 DLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFL-AKISCEKYPDKSLIA 219
+ F+ + +Q ME +L+ L ++M A T F+ F+ A ++ P L
Sbjct: 998 EFCYITDNTYFKEEVLQ-MESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQL-- 1168
Query: 220 RSVQLILNIIKGIDFLEFR----SSEIAAAVAISL 250
+ + N I + +E+ + + AA AI L
Sbjct: 1169---ECLTNYIAELSLMEYSMLGYAPSLVAASAIFL 1264
>AW756565 similar to PIR|T07675|T07 cyclin a2-type mitosis-specific -
soybean, partial (28%)
Length = 472
Score = 61.2 bits (147), Expect = 7e-10
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = +2
Query: 41 VNLDNVGSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIW 100
VN+DN+ SD+ LC + I K + E + P D++ ++ D+++S+R +DW+
Sbjct: 56 VNIDNIYSDTQLCATYVCD-IYKHLRES*EKKRPSTDFMDTIQK-DINVSMRTILVDWLV 229
Query: 101 KAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVP 157
+ Y P +L L+VNYLDR LS R +QLL V+C +A+K EE+ P
Sbjct: 230 EVAEEYRLVPETLYLTVNYLDRSLSWNAMNR---QRIQLLGVSCMMIASKYEEICAP 391
>TC232525 homologue to UP|Q39880 (Q39880) Mitotic cyclin b1-type, partial
(73%)
Length = 1242
Score = 57.0 bits (136), Expect = 1e-08
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Frame = +1
Query: 41 VNLDNVGSDSFLCFVAQSEEIVKVMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIW 100
+N+D D+ L ++I K E E++ DY+ D++ +R +DW+
Sbjct: 766 MNIDATDMDNELAAAEYIDDIYKFYKETEEEGCVH-DYMGSQP--DINAKMRSILVDWLI 936
Query: 101 KAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSV 160
+ H + P +L L++N +DRFLSV PR +QL+ ++ +A+K EE+ P+
Sbjct: 937 EVHRKFELMPETLYLTLNIVDRFLSVKAVPRR---ELQLVGISSMLIASKYEEIWAPEVN 1107
Query: 161 DLQ-VGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFI 200
D + + + +V Q + ME IL L W + S +
Sbjct: 1108DFECISDNAYVSQ--QVLMMEKKILRKLEWYFNSSNTLSLL 1224
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,505,942
Number of Sequences: 63676
Number of extensions: 210516
Number of successful extensions: 1046
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of query: 346
length of database: 12,639,632
effective HSP length: 98
effective length of query: 248
effective length of database: 6,399,384
effective search space: 1587047232
effective search space used: 1587047232
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Medicago: description of AC135848.10