TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135797.3 - phase: 0 /pseudo
         (460 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC219112 weakly similar to UP|Q94AA1 (Q94AA1) AT3g09470/F11F8_4,...   437  e-123
BI787704 similar to GP|15146218|gb| AT3g09470/F11F8_4 {Arabidops...    67  5e-20
TC219111                                                               61  1e-09
TC231429 weakly similar to GB|AAP68235.1|31711758|BT008796 At2g3...    35  0.092
TC221656 similar to UP|Q9SVS9 (Q9SVS9) Peptide transporter-like ...    30  2.3
TC230140 similar to UP|O03296 (O03296) Cytochrome b (Fragment), ...    30  2.9
TC205661                                                               29  3.8
BE022522                                                               29  3.8
BG725765 homologue to SP|P08640|AMYH Glucoamylase S1/S2 precurso...    29  3.8
TC212052                                                               29  3.8
TC210261 weakly similar to GB|CAA58476.1|929862|SCXORFS J0916 {S...    29  5.0
BM886161                                                               28  8.6
TC232951 similar to UP|Q945B8 (Q945B8) Growth-on protein GRO10, ...    28  8.6

>TC219112 weakly similar to UP|Q94AA1 (Q94AA1) AT3g09470/F11F8_4, partial
           (43%)
          Length = 1150

 Score =  437 bits (1125), Expect = e-123
 Identities = 227/294 (77%), Positives = 248/294 (84%), Gaps = 1/294 (0%)
 Frame = +3

Query: 168 NFHEGAVIGDFNGEFWGVYTLHQFIGNLITFALLSDGQ-EGSTNGTTLLFVVFLSVMTFG 226
           + HEGAVIGDFNGEFW VY LHQFIGNLITFALLSD Q EGST GTTLLF+VFL +MTFG
Sbjct: 6   SLHEGAVIGDFNGEFWAVYALHQFIGNLITFALLSDNQQEGSTKGTTLLFIVFLFIMTFG 185

Query: 227 AILTCFLHKRGDYSKGGYKHLDAGTGQSKSLKSLCRSLTGALSDVKMLLIIPLIAYSGLQ 286
           AIL CFL KR   SKG  +   A  G   SLKSL +SL  ALSDVKMLLIIPLIAYSGLQ
Sbjct: 186 AILMCFLRKRSANSKGQQELSGADAGACASLKSLSKSLASALSDVKMLLIIPLIAYSGLQ 365

Query: 287 HAFVWAEFTKYVVTPEIGVSGVGIAMAVYGAFDGICSLVAGRLTFGLTSITSIVSFGAFV 346
            AFVWAEFTKYVVTP IG+SGVG +MA Y AFDGICSL+AGRLT GLTSIT+IVS G F 
Sbjct: 366 QAFVWAEFTKYVVTPAIGISGVGSSMAAYAAFDGICSLLAGRLTSGLTSITTIVSAGLFA 545

Query: 347 QAVVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEGAFAQ 406
           QAVVL+LLLL+FS+SSG +GT+YILFLA LLGIGDGVLMTQLNAL+G+LFKHD EGAFAQ
Sbjct: 546 QAVVLVLLLLNFSISSGLLGTVYILFLAGLLGIGDGVLMTQLNALIGILFKHDTEGAFAQ 725

Query: 407 LKIWQSATIAMVFFLAPYISFQAVIMVMLTLLCLSFCSFLWLALKVGNASSPST 460
           LKIWQ ATIA+VFF AP ISF+AV+++ML LLC SFC FL LALKVG A SPST
Sbjct: 726 LKIWQCATIAIVFFFAPLISFKAVLVIMLALLCFSFCIFLLLALKVGKAPSPST 887


>BI787704 similar to GP|15146218|gb| AT3g09470/F11F8_4 {Arabidopsis
           thaliana}, partial (14%)
          Length = 421

 Score = 67.0 bits (162), Expect(2) = 5e-20
 Identities = 37/53 (69%), Positives = 44/53 (82%)
 Frame = +3

Query: 9   DEETPLVVATDESPIQFQQHKSHTRDVHILSIAFLLIFLAYGAAQNLQSTLNT 61
           DEETPLV   D S ++ ++   HTRDVHILS+AFLL+FLA+GAAQNLQSTLNT
Sbjct: 144 DEETPLV--GDISGLEGRK-SHHTRDVHILSLAFLLVFLAFGAAQNLQSTLNT 293



 Score = 48.9 bits (115), Expect(2) = 5e-20
 Identities = 21/40 (52%), Positives = 26/40 (64%)
 Frame = +2

Query: 75  GGFGYDFAWDIIFVFYIFFCVCFFGGADSRIQECFDCWNF 114
           G  GY   WD +FVF+I    CFFGGA SR+QE F  W++
Sbjct: 296 G*LGYHLTWDPVFVFHIPLRGCFFGGASSRLQERFAYWDY 415


>TC219111 
          Length = 409

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 420 FLAPYISFQAVIMVMLTLLCLSFCSFLWLALKVGNASSPST 460
           F AP +SF+AV+++ML LLC SFC FL LALKVG  SSPST
Sbjct: 2   FFAPLVSFKAVLVIMLALLCFSFCIFLLLALKVGKTSSPST 124


>TC231429 weakly similar to GB|AAP68235.1|31711758|BT008796 At2g36810
           {Arabidopsis thaliana;} , partial (12%)
          Length = 677

 Score = 34.7 bits (78), Expect = 0.092
 Identities = 28/113 (24%), Positives = 50/113 (43%), Gaps = 2/113 (1%)
 Frame = +1

Query: 79  YDFAWDIIFVFYIFFCVCFFGGADSR-IQECFDCWNFGLLVIPGCKFEAQLVYVGSGFCL 137
           +D  W II    I+FC      +D++ I   +    FG+LV    +    +V   S   L
Sbjct: 58  FDAPWPIIQANAIYFCSSMLSLSDNQHILAVYHSQVFGMLVGKLSRSPDAVVRATSSAAL 237

Query: 138 SWVLRF-YIMGWAACQGTYLTSTARSHAIDNNFHEGAVIGDFNGEFWGVYTLH 189
             +L+  ++  W A +   L ST+R+H +++  +          +FW +Y  H
Sbjct: 238 GLLLKSSHLCSWRAVELDRLESTSRNHDVESTKN--------*QQFWNIYQNH 372


>TC221656 similar to UP|Q9SVS9 (Q9SVS9) Peptide transporter-like protein,
           partial (31%)
          Length = 860

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
 Frame = +3

Query: 348 AVVLILLLLDFSMSSGF-IGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEGAFAQ 406
           A +LIL+    +  + F +G   +LFL  ++G  +      ++   G ++   + GAF  
Sbjct: 210 AAILILVNQGLATLAFFGVGVNLVLFLTRVMGQDNAEAANSVSKWTGTVYHFSLLGAFLS 389

Query: 407 LKIWQSATIAMVFFLAPYISFQAVIMVMLTLLCLSFCSFLWLALKVGNASSP 458
              W       +        FQ + ++ L  L LS   FL      GN   P
Sbjct: 390 DSYWGRYMTCAI--------FQVIFVIGLVSLSLSSYIFLLKPSGCGNKELP 521


>TC230140 similar to UP|O03296 (O03296) Cytochrome b (Fragment), partial (5%)
          Length = 1462

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/71 (26%), Positives = 32/71 (44%), Gaps = 8/71 (11%)
 Frame = +2

Query: 109  FDCWNFGLLVIPGCKFEAQLVYVGSGFCLSWVL--------RFYIMGWAACQGTYLTSTA 160
            F+   F  +++P   F   L  +  G+ ++W L           ++GW A    ++ S  
Sbjct: 944  FESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIAL--VFVLSLK 1117

Query: 161  RSHAIDNNFHE 171
            RS A+D NF E
Sbjct: 1118 RSGAVDLNFLE 1150


>TC205661 
          Length = 1383

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 27/88 (30%), Positives = 45/88 (50%), Gaps = 1/88 (1%)
 Frame = -3

Query: 349 VVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEGAFAQLK 408
           ++L+LLLL F  S+         F  +++GI DGVLMT + A + +  K ++    +   
Sbjct: 766 LLLLLLLLPF*TST---------FTVSVMGITDGVLMTTVCAEVLVAVKFELSTNPSSSG 614

Query: 409 IWQSAT-IAMVFFLAPYISFQAVIMVML 435
            W + T  A+  FL+P    +A  +V L
Sbjct: 613 NWLTFTSAALGKFLSPSEDVEARELVNL 530


>BE022522 
          Length = 414

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
 Frame = -3

Query: 186 YTLHQFI---GNLITFALLSDGQEGSTNGTTLLFVVFLSVMTFGAILTCFLHK-RGDYSK 241
           + LHQ I   GN ++  L+ +   G  N + + F  FL   +  A + C L + RG+   
Sbjct: 334 FDLHQIIRILGNKVSCMLVPNSARGE-N*SRVFFFFFLQKASL-AFVHCLLEEARGELVG 161

Query: 242 GGYKHLDAGTGQSKS-LKSLCRSLTGALS 269
           G Y H+  G G + +  ++L R   G L+
Sbjct: 160 GEYDHVHDGEGHAAAHRRALRRRAAGNLA 74


>BG725765 homologue to SP|P08640|AMYH Glucoamylase S1/S2 precursor (EC
           3.2.1.3) (Glucan 1 4-alpha- glucosidase), partial (1%)
          Length = 389

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/63 (28%), Positives = 28/63 (43%), Gaps = 2/63 (3%)
 Frame = -2

Query: 81  FAWDIIFVFYIFFCVCFFGGADSRIQECFDCWNF--GLLVIPGCKFEAQLVYVGSGFCLS 138
           F + I+ +F + F     G A         CW+   G++++P       +V  GSG C  
Sbjct: 271 FVFAIVLLFALLFVTAVRGAAGGYDAAGCGCWSLLRGVVLLP-------VVTAGSGGCWV 113

Query: 139 WVL 141
           WVL
Sbjct: 112 WVL 104


>TC212052 
          Length = 627

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/51 (33%), Positives = 24/51 (46%), Gaps = 1/51 (1%)
 Frame = +2

Query: 96  CFFGGADSRI-QECFDCWNFGLLVIPGCKFEAQLVYVGSGFCLSWVLRFYI 145
           C  G  D+R  Q     WN  ++ + G       V +GS  CLS  LR+Y+
Sbjct: 8   CSTGLLDARTAQSVITVWNGLIITVLGLGSVLGCVIIGSSSCLSSQLRYYV 160


>TC210261 weakly similar to GB|CAA58476.1|929862|SCXORFS J0916 {Saccharomyces
           cerevisiae;} , partial (7%)
          Length = 816

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 25/81 (30%), Positives = 33/81 (39%)
 Frame = +1

Query: 128 LVYVGSGFCLSWVLRFYIMGWAACQGTYLTSTARSHAIDNNFHEGAVIGDFNGEFWGVYT 187
           LV VG  FCL   L  Y++           S  R   I +   EG +   F   +WG+Y 
Sbjct: 55  LVLVGYQFCLVQGLNHYLL-----------SNERGMDIISQNKEG-IFSIFG--YWGMYL 192

Query: 188 LHQFIGNLITFALLSDGQEGS 208
           L   +GN + F   S G   S
Sbjct: 193 LGVHLGNYLIFGSHSSGFRSS 255


>BM886161 
          Length = 470

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/24 (45%), Positives = 18/24 (74%)
 Frame = -3

Query: 437 LLCLSFCSFLWLALKVGNASSPST 460
           + CLS CS L+LA+K+ ++S  S+
Sbjct: 210 IFCLSICSILFLAIKLASSSYKSS 139


>TC232951 similar to UP|Q945B8 (Q945B8) Growth-on protein GRO10, partial
           (29%)
          Length = 502

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 29/113 (25%), Positives = 46/113 (40%)
 Frame = +1

Query: 335 SITSIVSFGAFVQAVVLILLLLDFSMSSGFIGTLYILFLAALLGIGDGVLMTQLNALLGM 394
           ++ + V F  F    + +L  L   MSS FI  L +LF       G   L T L ALL  
Sbjct: 142 NVKAAVLFVVFASCFLFMLYKL---MSSWFIDVLVVLFCIG----GIEGLQTCLVALLSR 300

Query: 395 LFKHDMEGAFAQLKIWQSATIAMVFFLAPYISFQAVIMVMLTLLCLSFCSFLW 447
            FKH  E                 +   P++   + + + ++  C++F + LW
Sbjct: 301 WFKHAGES----------------YIKVPFLGAISYLTLAVSPFCITF-AILW 408


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.329    0.143    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,765,376
Number of Sequences: 63676
Number of extensions: 360884
Number of successful extensions: 3033
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3028
length of query: 460
length of database: 12,639,632
effective HSP length: 101
effective length of query: 359
effective length of database: 6,208,356
effective search space: 2228799804
effective search space used: 2228799804
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)