BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135566.8 - phase: 0
(269 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC227231 similar to UP|Q6ZI79 (Q6ZI79) Proline-rich family prote... 311 2e-85
BM731266 112 2e-25
TC229625 37 0.009
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 36 0.021
TC221434 weakly similar to UP|Q6PAK2 (Q6PAK2) SERTA domain conta... 35 0.027
TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, p... 35 0.046
TC226563 similar to UP|Q93VZ2 (Q93VZ2) AT4g01050/F2N1_31, partia... 34 0.079
CO981481 33 0.10
BI426120 homologue to PIR|T06782|T06 extensin - soybean, partial... 33 0.18
TC206441 32 0.30
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida... 31 0.51
BU550241 31 0.51
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 31 0.51
TC227046 similar to UP|Q43525 (Q43525) Transcription factor, par... 31 0.67
CK606020 30 0.88
CD400087 30 0.88
TC203290 similar to GB|AAB61025.1|2191138|IG002N01 coded for by ... 30 1.1
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 30 1.1
TC203771 similar to GB|AAB61025.1|2191138|IG002N01 coded for by ... 30 1.1
TC231492 homologue to UP|GPMA_ZYMMO (P30798) 2,3-bisphosphoglyce... 30 1.1
>TC227231 similar to UP|Q6ZI79 (Q6ZI79) Proline-rich family protein-like,
partial (45%)
Length = 1060
Score = 311 bits (797), Expect = 2e-85
Identities = 176/270 (65%), Positives = 196/270 (72%), Gaps = 1/270 (0%)
Frame = +3
Query: 1 MACALQATITTNTCAFSTRKFSLKQQKINKRSSCMFIVRASSE-SDCNDEECAPDKEVGK 59
MACALQAT+ NT AFS+R+FSLK QK +KR +F VRA S+ SDCN+EECAPDKEVGK
Sbjct: 177 MACALQATLAANTYAFSSRRFSLKHQKNSKRRFSLFTVRADSDDSDCNEEECAPDKEVGK 356
Query: 60 VSMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAGT 119
VS+EWLA EKTKVVGT+PPRRK GWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAG+
Sbjct: 357 VSVEWLAGEKTKVVGTFPPRRKPGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAGS 536
Query: 120 SSDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEI 179
SSDGA+NTAAI AGLALISIAAASSILLQVGKN+PPQ+Q +YSGPSLSYYIN+F EI
Sbjct: 537 SSDGAENTAAIVAGLALISIAAASSILLQVGKNAPPQIQTAQYSGPSLSYYINKFTPPEI 716
Query: 180 TQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASIS 239
TQ VP++ ELSSSVQ ES
Sbjct: 717 TQV-----------------SVPSEAELSSSVQPES------------------------ 773
Query: 240 VPPESSPAEVSQVQVESQIQTETSSVDIVS 269
P EVSQVQVE+Q +ETSSV+I S
Sbjct: 774 -----PPPEVSQVQVEAQ-ASETSSVNIES 845
>BM731266
Length = 424
Score = 112 bits (280), Expect = 2e-25
Identities = 75/144 (52%), Positives = 83/144 (57%)
Frame = +1
Query: 126 NTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEITQAPSV 185
NTAAI G A+ISIAAASSILLQVGKN+PPQ+Q EYSGPSLSYYIN+FK EI
Sbjct: 1 NTAAIVTGFAMISIAAASSILLQVGKNAPPQIQTAEYSGPSLSYYINQFKPLEI------ 162
Query: 186 STETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPESS 245
TE VP++ ELSSSVQ ES S
Sbjct: 163 -----------TEVSVPSEAELSSSVQLES-----------------------------S 222
Query: 246 PAEVSQVQVESQIQTETSSVDIVS 269
P EVSQVQVE+Q ETSSV+IVS
Sbjct: 223 PPEVSQVQVEAQ-APETSSVNIVS 291
>TC229625
Length = 684
Score = 37.0 bits (84), Expect = 0.009
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +1
Query: 184 SVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPE 243
SVST S SVP S+ SS+Q + + T+ ++ T+ +D+S VP E
Sbjct: 58 SVSTNGVSSPSVPANSESSDAAASKSSIQEQ---VSGTKEDKNVDTKDSESDSSSGVPSE 228
Query: 244 SSPAEVSQVQVESQ 257
S P V V +E +
Sbjct: 229 SFPKPVVTVNIEPE 270
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 35.8 bits (81), Expect = 0.021
Identities = 37/165 (22%), Positives = 67/165 (40%)
Frame = -3
Query: 105 VYVAESAISSGTAGTSSDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSG 164
+Y E SS +SS+ + + + G + S +++S+ S S
Sbjct: 789 LYRLEGLSSSSPPSSSSESSLSDLFLFGGASAFSQSSSSTSSSSSSPFSSGSKSLDASSS 610
Query: 165 PSLSYYINEFKTQEITQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELS 224
++S + + + +P S+ + SSS +ES + + S S + + + S
Sbjct: 609 SAVSKGRIRYSVPKSSSSPCSSSSSSSSSSSSSESSSESLSSSSGSPPRWTSPSSSSSSS 430
Query: 225 SSIQTESVATDASISVPPESSPAEVSQVQVESQIQTETSSVDIVS 269
SS S A+ +S S+ SS + S S + TSS D S
Sbjct: 429 SSSSPPSGASSSSSSLSSPSSSSSSSSSSSSSSASSTTSSTDSYS 295
Score = 30.0 bits (66), Expect = 1.1
Identities = 42/212 (19%), Positives = 85/212 (39%), Gaps = 11/212 (5%)
Frame = -3
Query: 60 VSMEWLAEEKTKVVGTYPPRRKQGWTGYVEKDTAGQTNIYSVEPAVYVAESAISSGTAGT 119
+S EW + + + + P + + G + +S + + + S+ S ++G+
Sbjct: 810 LSKEWTQLYRLEGLSSSSPPSSSSESSLSDLFLFGGASAFS-QSSSSTSSSSSSPFSSGS 634
Query: 120 SSDGAQNTAAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYYINEFKTQEI 179
S A +++A++ G S+ +SS +S E S SLS + +
Sbjct: 633 KSLDASSSSAVSKGRIRYSVPKSSSSPCSSSSSSSSSSSSSESSSESLS---SSSGSPPR 463
Query: 180 TQAPSVSTETELSSSVPT-----------ESDVPTQTELSSSVQSESIAPAKTELSSSIQ 228
+PS S+ + SSS P+ S + + SSS + S + SSS
Sbjct: 462 WTSPSSSSSSSSSSSPPSGASSSSSSLSSPSSSSSSSSSSSSSSASSTTSSTDSYSSSSS 283
Query: 229 TESVATDASISVPPESSPAEVSQVQVESQIQT 260
+ T S + S A + + + +S +++
Sbjct: 282 STKTLTSFSSTCSLNSFVAFIFESRNQSTLRS 187
>TC221434 weakly similar to UP|Q6PAK2 (Q6PAK2) SERTA domain containing 4,
partial (7%)
Length = 820
Score = 35.4 bits (80), Expect = 0.027
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +3
Query: 186 STETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPESS 245
S E+S V TES + ++ + S S+++ P KTE +S S T S S P S
Sbjct: 147 SNSHEISKPVETESSLLNHSDKTISTSSDALEPLKTESNSISVIPSPVTSLSSSKIPSSP 326
Query: 246 PAEVSQVQVESQIQTETSS 264
+ V TE++S
Sbjct: 327 LPPLDTSSVTESGDTESAS 383
>TC214054 similar to UP|Q75QC2 (Q75QC2) Glutamate-rich protein, partial (68%)
Length = 1306
Score = 34.7 bits (78), Expect = 0.046
Identities = 25/102 (24%), Positives = 47/102 (45%), Gaps = 15/102 (14%)
Frame = +1
Query: 173 EFKTQEITQAPSVSTETELSSSVPTE-SDVPTQTELSSSVQSESIAPAKTELSSSIQT-- 229
E +E T+AP+ + E + P E +VP +TE + ++E PA+ + +
Sbjct: 277 EAPKEETTEAPTETVEKTTTEVAPEEPKEVPVETEEVVAKETEEEKPAEEKSEEKTEEVK 456
Query: 230 -------ESVATDASISVPP-----ESSPAEVSQVQVESQIQ 259
E+ T+++ + PP E+ PAE + VE ++
Sbjct: 457 EEAEEPKETTETESAAAAPPATTEEENKPAESVETPVEVPVE 582
>TC226563 similar to UP|Q93VZ2 (Q93VZ2) AT4g01050/F2N1_31, partial (51%)
Length = 1946
Score = 33.9 bits (76), Expect = 0.079
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Frame = +3
Query: 114 SGTAGTSSDGAQNT---AAIAAGLALISIAAASSILLQVGKNSPPQVQKVEYSGPSLSYY 170
S G ++DG T AA AAGL+L++ + SIL VG ++++ L +
Sbjct: 1008 SEAIGDTTDGVAVTLGVAAAAAGLSLLAFSEIESILQVVG-----SAALIQFASKKLLF- 1169
Query: 171 INEFKTQEITQ-APSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQT 229
E + Q + Q ++T+ V D+ + L SS ++++ PA E SS + T
Sbjct: 1170 -AEDREQTVKQLGEFLNTKVAPKELVDEIKDI-GKALLPSSTDNKAL-PAPAEKSSELAT 1340
Query: 230 ESVATDASISVPPESSPAEVSQVQVESQIQTETSSV 265
+++ P + A + + E +SV
Sbjct: 1341 ADSTVQRAVATPESKAEAVATPEPKVDAVAPEVNSV 1448
>CO981481
Length = 769
Score = 33.5 bits (75), Expect = 0.10
Identities = 34/134 (25%), Positives = 66/134 (48%), Gaps = 5/134 (3%)
Frame = -2
Query: 129 AIAAGLALISIAAASSILLQVGKNSPPQVQKV---EYSGPSLSYYINEFKTQEITQAPSV 185
A+ + ++ ++ AAS++LL+V + P + S PS + ++ A ++
Sbjct: 582 AMLSTASVSAVVAASALLLRVPLTASPPTRVSTS*STSDPS------RLPPRSVSAAAAL 421
Query: 186 STETE-LSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPES 244
++E+ L+ S T +PT T SSS + A T S+ T S +T +++PP +
Sbjct: 420 TSESSTLTGSTRT---LPTSTTRSSSSTPSTRPSASTPASTGSSTLSTSTARLVALPPPA 250
Query: 245 -SPAEVSQVQVESQ 257
SP ++V V ++
Sbjct: 249 RSPVVSTRVTVTTR 208
>BI426120 homologue to PIR|T06782|T06 extensin - soybean, partial (23%)
Length = 421
Score = 32.7 bits (73), Expect = 0.18
Identities = 23/81 (28%), Positives = 40/81 (48%)
Frame = +1
Query: 187 TETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPESSP 246
T + L VPT VP + + V + + ++SSS ++T +++ VP S+P
Sbjct: 31 TSSSLLLQVPTTIQVPFSSTTTL*VPISTTPSLQVQISSSSLQVPISTTSTLQVPISSTP 210
Query: 247 AEVSQVQVESQIQTETSSVDI 267
+ QVQV S + T+S +
Sbjct: 211 S--LQVQVSSSSCSFTTSTTL 267
>TC206441
Length = 989
Score = 32.0 bits (71), Expect = 0.30
Identities = 22/93 (23%), Positives = 46/93 (48%)
Frame = +1
Query: 173 EFKTQEITQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESV 232
E K +EI++A + L+S ES P ++ + +++ P KTE+ ++ + ++
Sbjct: 382 ETKVEEISRAINEPVRETLASKFEEESVEPGADKVE---KEQTVEPEKTEVQATKENDAT 552
Query: 233 ATDASISVPPESSPAEVSQVQVESQIQTETSSV 265
T + P+ +PA+ +Q Q + I S+
Sbjct: 553 KTSKDL---PKETPAKPAQKQSNNIISKVKQSL 642
>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
{Arabidopsis thaliana;} , partial (49%)
Length = 731
Score = 31.2 bits (69), Expect = 0.51
Identities = 23/71 (32%), Positives = 35/71 (48%), Gaps = 1/71 (1%)
Frame = +3
Query: 178 EITQAPSVSTETELSSSVPTESDVPTQ-TELSSSVQSESIAPAKTELSSSIQTESVATDA 236
+ +++P+ S+S T + PT T SSS S P+ T S+S + +T +
Sbjct: 153 QASRSPAPPPPPPRSASSSTTASSPTAVTPPSSSPPRPSPGPSATPTSTSPSPATPSTSS 332
Query: 237 SISVPPESSPA 247
S PP SSPA
Sbjct: 333 SAPRPPLSSPA 365
Score = 30.4 bits (67), Expect = 0.88
Identities = 26/75 (34%), Positives = 31/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 180 TQAPSVSTETELSSSVPTESD----VPTQTELSSSVQSESIAPAKTELSSSIQTESVATD 235
T A S + T SSS P S PT T S + S S + + LSS T S A
Sbjct: 210 TTASSPTAVTPPSSSPPRPSPGPSATPTSTSPSPATPSTSSSAPRPPLSSPAPTPSPAPT 389
Query: 236 ASISVPPESSPAEVS 250
S P SSP +
Sbjct: 390 FSPPPPATSSPCSAA 434
>BU550241
Length = 565
Score = 31.2 bits (69), Expect = 0.51
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -3
Query: 180 TQAPSVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKT-ELSSSIQTESVATDASI 238
T +P + T + + + S + +SSS+ SE + + +LSSS Q + + +
Sbjct: 332 TSSPKIRTGGNVDMNSDSYSPCKKKLSISSSINSEVLNSGRMGKLSSSNQQQRSPSFKGL 153
Query: 239 SVPPESSPAEVSQVQVES 256
SVP +SS + + + S
Sbjct: 152 SVPIKSSRTTIKDLSINS 99
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 31.2 bits (69), Expect = 0.51
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 180 TQAPSVSTETELSSSVPTESDVPTQTELS-SSVQSESIAPAKTELSSSIQTESVATDASI 238
+ +PS S+ + SSS P+ S +P S SS +S S P+ E SSS + S+++ S
Sbjct: 487 SSSPSSSSLSSSSSSSPSSSSLPPPPLASGSSSESASSPPSSPEKSSS-SSSSLSSSPSF 311
Query: 239 SVPPESSPAEVSQVQVESQIQTE 261
++ SS S V + S +E
Sbjct: 310 TLSSSSS----SSVSLASLFSSE 254
Score = 28.9 bits (63), Expect = 2.5
Identities = 25/86 (29%), Positives = 42/86 (48%)
Frame = -1
Query: 184 SVSTETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASISVPPE 243
S S+ + SSS P+ S + + + SSS S S+ P L+S +ES ++ S
Sbjct: 514 SSSSPSSSSSSSPSSSSLSSSS--SSSPSSSSLPP--PPLASGSSSESASSPPSSPEKSS 347
Query: 244 SSPAEVSQVQVESQIQTETSSVDIVS 269
SS + +S + + +SSV + S
Sbjct: 346 SSSSSLSSSPSFTLSSSSSSSVSLAS 269
>TC227046 similar to UP|Q43525 (Q43525) Transcription factor, partial (58%)
Length = 735
Score = 30.8 bits (68), Expect = 0.67
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 171 INEFKTQEITQAPSVSTETELSS-SVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQT 229
I F T E+T P+ + + + SV + V + +S+ S +I+P+K SSS T
Sbjct: 10 IASFLTLELTVKPAGALSPKPPAFSVAARAVVSAGSTISALTSSAAISPSKKTNSSSNST 189
Query: 230 ESVATDASISVPPES 244
S+AT+ + + S
Sbjct: 190 ASLATNCPVELTMRS 234
>CK606020
Length = 340
Score = 30.4 bits (67), Expect = 0.88
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -3
Query: 186 STETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELSSSIQTESVATDASIS 239
ST + +SS T S + + SSS S S + + + SSS + S ++D SIS
Sbjct: 338 STSSPSTSSSSTSSSTSSSSSSSSSSISSSSSSSSSSSSSSSSSSSSSSDGSIS 177
Score = 27.3 bits (59), Expect = 7.4
Identities = 20/60 (33%), Positives = 30/60 (49%)
Frame = -3
Query: 208 SSSVQSESIAPAKTELSSSIQTESVATDASISVPPESSPAEVSQVQVESQIQTETSSVDI 267
SSS S S + + + SSSI + S ++ +S S SS + S + S + T S DI
Sbjct: 317 SSSSTSSSTSSSSSSSSSSISSSS-SSSSSSSSSSSSSSSSSSDGSISSSLATGESGSDI 141
>CD400087
Length = 576
Score = 30.4 bits (67), Expect = 0.88
Identities = 23/81 (28%), Positives = 40/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 179 ITQAPSVSTETELSSSVPTESDVPTQTELSSSVQ-SESIAPAKTELS--SSIQTESVATD 235
++ APS++T T + +++ T D P SSS+ ES T LS S + SV+
Sbjct: 180 LSAAPSMNTNTSVITAITTTRDEPDYYSSSSSITVPESSRSWMTNLSFGSRRRRSSVSVC 359
Query: 236 ASISVPPESSPAEVSQVQVES 256
+S + P + P + + E+
Sbjct: 360 SSTAESPHAKPHKANHAAWEA 422
>TC203290 similar to GB|AAB61025.1|2191138|IG002N01 coded for by A. thaliana
cDNA T46771; coded for by A. thaliana cDNA N97218; coded
for by A. thaliana cDNA T41776; coded for by A. thaliana
cDNA T42436; coded for by A. thaliana cDNA H37214; coded
for by A. thaliana cDNA AA042240; coded for by A.
thaliana cDNA T21099; coded for by A. thaliana cDNA
T21088; coded for by A. thaliana cDNA R65156; coded for
by A. thaliana cDNA H36209; coded for by A. thaliana
cDNA T20742 {Arabidopsis thaliana;} , partial (65%)
Length = 1015
Score = 30.0 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 24/40 (59%)
Frame = -3
Query: 40 ASSESDCNDEECAPDKEVGKVSMEWLAEEKTKVVGTYPPR 79
AS+E D ++E +E + + +WL E+K+KVV PR
Sbjct: 383 ASTEDDSSEEALV*SREDFRDTEKWLREDKSKVVLVLVPR 264
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 30.0 bits (66), Expect = 1.1
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -2
Query: 186 STETELSSSVPTESDVPTQTELSSSVQSESIAPAKTELS---SSIQTESVATDASISVPP 242
S+ + SSS P+ S P+ + LSSS S + + LS + + + S + AS S P
Sbjct: 644 SSSSSSSSSSPSSSSSPSSSPLSSSSSSPPSSSSSPSLSLPPAPLASGSSSGSASSSPSP 465
Query: 243 ESSPAEVSQVQVESQIQTETSS 264
E S + S + + +SS
Sbjct: 464 EKSSSPSSSS*SSASSSSSSSS 399
>TC203771 similar to GB|AAB61025.1|2191138|IG002N01 coded for by A. thaliana
cDNA T46771; coded for by A. thaliana cDNA N97218; coded
for by A. thaliana cDNA T41776; coded for by A. thaliana
cDNA T42436; coded for by A. thaliana cDNA H37214; coded
for by A. thaliana cDNA AA042240; coded for by A.
thaliana cDNA T21099; coded for by A. thaliana cDNA
T21088; coded for by A. thaliana cDNA R65156; coded for
by A. thaliana cDNA H36209; coded for by A. thaliana
cDNA T20742 {Arabidopsis thaliana;} , partial (51%)
Length = 894
Score = 30.0 bits (66), Expect = 1.1
Identities = 15/40 (37%), Positives = 24/40 (59%)
Frame = -1
Query: 40 ASSESDCNDEECAPDKEVGKVSMEWLAEEKTKVVGTYPPR 79
AS+E D ++E +E + + +WL E+K+KVV PR
Sbjct: 630 ASTEDDSSEEALV*SREDFRDTEKWLREDKSKVVLVLVPR 511
>TC231492 homologue to UP|GPMA_ZYMMO (P30798)
2,3-bisphosphoglycerate-dependent phosphoglycerate
mutase (Phosphoglyceromutase) (PGAM) (BPG-dependent
PGAM) (dPGM) , partial (6%)
Length = 1132
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/108 (26%), Positives = 43/108 (38%), Gaps = 13/108 (12%)
Frame = +1
Query: 155 PQVQKVEYSGPSLSYYINEFKTQEITQAPSVSTET----ELSSSVPTESDVPTQTELSSS 210
PQV+ E + + + +TQ + PS E VP D+ TEL S
Sbjct: 76 PQVRMTERTEIPIPVPVLNPETQIHSSVPSSGQSNKQPFEAELQVPVSVDLVLPTELYSG 255
Query: 211 V------QSESIAPAKTELS---SSIQTESVATDASISVPPESSPAEV 249
+ QS + ++LS SSI T + + PES PA +
Sbjct: 256 LSVSLGNQSAPVVTPMSDLSKIDSSISTGGIMPKGMLKPGPESQPASI 399
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.303 0.118 0.308
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,529,628
Number of Sequences: 63676
Number of extensions: 114349
Number of successful extensions: 675
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of query: 269
length of database: 12,639,632
effective HSP length: 96
effective length of query: 173
effective length of database: 6,526,736
effective search space: 1129125328
effective search space used: 1129125328
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC135566.8