TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135565.5 + phase: 0 /pseudo
         (93 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CD402931 similar to GP|9081793|dbj P0489A01.23 {Oryza sativa (ja...    95  7e-21
BF598042                                                               27  2.2
TC217068 similar to UP|Q93Z30 (Q93Z30) AT4g18950/F13C5_120 (Prot...    26  3.8
TC216663 UP|C823_SOYBN (O49858) Cytochrome P450 82A3  (P450 CP6)...    26  3.8
TC206055 similar to PRF|1604369A.0|226743|1604369A sulfated surf...    25  8.4
TC230793 UP|O06921 (O06921) MadZ, partial (12%)                        25  8.4
TC206427 similar to UP|Q8S9I6 (Q8S9I6) AT5g55180/MCO15_13, parti...    25  8.4

>CD402931 similar to GP|9081793|dbj P0489A01.23 {Oryza sativa (japonica
           cultivar-group)}, partial (5%)
          Length = 617

 Score = 94.7 bits (234), Expect = 7e-21
 Identities = 45/65 (69%), Positives = 56/65 (85%)
 Frame = +2

Query: 1   MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
           +MN+FCF ALD+TL+++M S+NKDN TKPFGGKV VL GDFRQ+LPV+R  +RQ IV SA
Sbjct: 251 VMNKFCFEALDRTLQDIMASQNKDNATKPFGGKV-VLGGDFRQILPVIRKGSRQDIVGSA 427

Query: 61  VNASK 65
           +NASK
Sbjct: 428 INASK 442


>BF598042 
          Length = 292

 Score = 26.6 bits (57), Expect = 2.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 6   CFVALDKTLRNVMGSENKDNKTKPFGGK 33
           C++  D  +R V G E +D + K FGG+
Sbjct: 149 CYIRGDDNIRPVSGREWQDYRVK*FGGR 66


>TC217068 similar to UP|Q93Z30 (Q93Z30) AT4g18950/F13C5_120 (Protein
            kinase-like protein), partial (88%)
          Length = 1650

 Score = 25.8 bits (55), Expect = 3.8
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +3

Query: 62   NASKVWRRC--EVLRLTMNMGLSTANNNADQE 91
            NASK+WR C  E++++ + + +  A + A+ E
Sbjct: 1269 NASKIWRPC*REIIQMEVVVAVHLAPHQAEYE 1364


>TC216663 UP|C823_SOYBN (O49858) Cytochrome P450 82A3  (P450 CP6) , complete
          Length = 1814

 Score = 25.8 bits (55), Expect = 3.8
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -1

Query: 52  TRQQIVSSAVNASKVWRRCEVLRLTMNMGLSTANNN 87
           +   ++    + +++W RC +LRL  N  ++   N+
Sbjct: 548 SNSSLIEVRTSETRMWFRCSILRLERNSNVTILRNS 441


>TC206055 similar to PRF|1604369A.0|226743|1604369A sulfated surface
           glycoprotein SSG185. {Volvox carteri;} , partial (6%)
          Length = 824

 Score = 24.6 bits (52), Expect = 8.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 14  LRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVR 49
           LRN      +  K KPF   +F L   F+Q  P  R
Sbjct: 602 LRNKKNETKEGKKKKPFCSIIFPLEAPFQQCRPPPR 495


>TC230793 UP|O06921 (O06921) MadZ, partial (12%)
          Length = 1100

 Score = 24.6 bits (52), Expect = 8.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 63  ASKVWRRCEVLRLTMNMG 80
           A KVWR C++ RL  ++G
Sbjct: 462 ALKVWRNCKI*RLIKDLG 409


>TC206427 similar to UP|Q8S9I6 (Q8S9I6) AT5g55180/MCO15_13, partial (89%)
          Length = 1660

 Score = 24.6 bits (52), Expect = 8.4
 Identities = 7/16 (43%), Positives = 12/16 (74%)
 Frame = +2

Query: 56 IVSSAVNASKVWRRCE 71
          I+ S +N +K+W+ CE
Sbjct: 71 IIRSGINRNKLWKNCE 118


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,336,049
Number of Sequences: 63676
Number of extensions: 27268
Number of successful extensions: 127
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of query: 93
length of database: 12,639,632
effective HSP length: 69
effective length of query: 24
effective length of database: 8,245,988
effective search space: 197903712
effective search space used: 197903712
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)