BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135415.3 + phase: 0 /pseudo
(436 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203933 elongation factor 1A SMV resistance-related protein [Gl... 310 1e-84
TC203932 UP|EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-... 308 3e-84
TC203946 homologue to UP|Q9LN13 (Q9LN13) T6D22.2, partial (47%) 308 3e-84
TC203934 homologue to UP|Q9LN13 (Q9LN13) T6D22.2, partial (22%) 271 5e-73
TC203952 homologue to UP|O81921 (O81921) Elongation factor 1-alp... 266 1e-71
TC203962 homologue to UP|Q9LN13 (Q9LN13) T6D22.2, partial (18%) 207 1e-53
TC203954 homologue to UP|EF1A_LYCES (P17786) Elongation factor 1... 156 1e-48
TC203960 UP|EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-... 187 1e-47
AI899942 similar to PIR|S17434|S17 translation elongation factor... 128 1e-44
TC203949 homologue to UP|EF1A_VICFA (O24534) Elongation factor 1... 172 3e-43
BE020525 similar to PIR|S17434|S17 translation elongation factor... 129 3e-37
TC203945 UP|EF12_DAUCA (P34823) Elongation factor 1-alpha (EF-1-... 106 2e-36
AW460160 similar to GP|5917747|gb| elongation factor-1 alpha 3 {... 149 3e-36
BE057687 similar to GP|29243204|db elongation factor 1A {Avicenn... 144 6e-35
BF008896 similar to GP|18419676|gb elongation factor 1-alpha {El... 121 4e-34
AW568837 similar to GP|3319882|emb elongation factor 1-alpha (EF... 138 4e-33
BE474292 similar to SP|P25698|EF1A Elongation factor 1-alpha (EF... 126 2e-29
AW432755 similar to PIR|S17434|S17 translation elongation factor... 122 4e-28
BF070487 weakly similar to GP|7230393|gb|A elongation factor 1 a... 119 2e-27
TC203963 similar to UP|Q8SAT1 (Q8SAT1) Elongation factor 1 alpha... 117 8e-27
>TC203933 elongation factor 1A SMV resistance-related protein [Glycine max]
Length = 1323
Score = 310 bits (793), Expect = 1e-84
Identities = 160/237 (67%), Positives = 185/237 (77%)
Frame = +2
Query: 153 LQQAIDQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQS 212
L A+DQISEPKRP KPLRLPLQ VYKIGGIGTVPVGRVETGVLKPGMV+TFAPT L +
Sbjct: 239 LLDALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTT 418
Query: 213 GVKSIQKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVI 272
VKS++ E + EALP D VGF + N + D L RGYVASNS+D+PA EAA FT++VI
Sbjct: 419 EVKSVEMHHEALTEALPGDNVGFNVKNVAVKD--LKRGYVASNSKDDPAKEAANFTAQVI 592
Query: 273 IINHPSVITKGYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMI 332
I+NHP I GY P+LDCHTSH+AVKFA+L TK DR +G ELEK+PK LKNGDAG VKMI
Sbjct: 593 IMNHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMI 772
Query: 333 PMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNKAATKMTGSTTDQK 389
P KPMVVE +EYP LGRFAVRDMRQTVAVGVI +V+K K+ K+T + +K
Sbjct: 773 PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEK---KDPTGAKVTKAAQKKK 934
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +2
Query: 321 LKNGDAGIVKMIPMKPMVVEGINEY 345
LKNGDAG VKMIP KPMVVE +EY
Sbjct: 5 LKNGDAGFVKMIPTKPMVVETFSEY 79
>TC203932 UP|EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-alpha),
complete
Length = 1766
Score = 308 bits (789), Expect = 3e-84
Identities = 159/237 (67%), Positives = 185/237 (77%)
Frame = +2
Query: 153 LQQAIDQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQS 212
L A+DQISEPKRP KPLRLPLQ VYKIGGIGTVPVGRVETGVLKPGMV+TFAPT L +
Sbjct: 698 LLDALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTT 877
Query: 213 GVKSIQKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVI 272
VKS++ E++ EA P D VGF + N + D L RGYVASNS+D+PA EAA FT++VI
Sbjct: 878 EVKSVEMHHESLTEAHPGDNVGFNVKNVAVKD--LKRGYVASNSKDDPAKEAANFTAQVI 1051
Query: 273 IINHPSVITKGYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMI 332
I+NHP I GY P+LDCHTSH+AVKFA+L TK DR +G ELEK+PK LKNGDAG VKMI
Sbjct: 1052IMNHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMI 1231
Query: 333 PMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNKAATKMTGSTTDQK 389
P KPMVVE +EYP LGRFAVRDMRQTVAVGVI +V+K K+ K+T + +K
Sbjct: 1232PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEK---KDPTGAKVTKAAQKKK 1393
Score = 154 bits (390), Expect(2) = 1e-50
Identities = 76/99 (76%), Positives = 83/99 (83%)
Frame = +2
Query: 1 MVNSKPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVL 60
M K +I+IV IGHV+SGKSTT GHL+YKLGGI K IE KEAAEM RSFKYAWVL
Sbjct: 53 MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 232
Query: 61 DKLKAERERGITIDISMCKFETTKYCCTLIDAPGHRDFI 99
DKLKAERERGITIDI++ KFETTKY CT+IDAPGHRDFI
Sbjct: 233 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 349
Score = 63.9 bits (154), Expect(2) = 1e-50
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +1
Query: 100 N*EHDHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWCEANDLLLQQ 155
+*E+D+ D+ S*LCCS H F + F SW GW+D TCS +H WCE +DLLL Q
Sbjct: 346 H*EYDYWDIPS*LCCSYH*FDHWWF*SWYFQGWTDS*TCSAFIHPWCETDDLLL*Q 513
>TC203946 homologue to UP|Q9LN13 (Q9LN13) T6D22.2, partial (47%)
Length = 1858
Score = 308 bits (789), Expect = 3e-84
Identities = 157/228 (68%), Positives = 180/228 (78%)
Frame = +3
Query: 153 LQQAIDQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQS 212
L +A+DQI+EPKRP KPLRLPLQ VYKIGGIGTVPVGRVETGVLKPGMV+TFAPT L +
Sbjct: 687 LLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTT 866
Query: 213 GVKSIQKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVI 272
VKS++ E + EA P D VGF + N + D L RG+VASNS+D+PA EAA FTS+VI
Sbjct: 867 EVKSVEMHHETLTEAHPGDNVGFNVKNVAVKD--LKRGFVASNSKDDPAKEAANFTSQVI 1040
Query: 273 IINHPSVITKGYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMI 332
I+NHP I GY P+LDCHTSH+AVKFA+L TK DR +G ELEK+PK LKNGDAG+VKMI
Sbjct: 1041IMNHPGQIGNGYAPVLDCHTSHIAVKFAELLTKIDRRSGKELEKEPKFLKNGDAGLVKMI 1220
Query: 333 PMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNKAATK 380
P KPMVVE +EYP LGRFAVRDMRQTVAVGVI SV+K TK
Sbjct: 1221PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTK 1364
Score = 156 bits (395), Expect(2) = 4e-54
Identities = 77/99 (77%), Positives = 83/99 (83%)
Frame = +3
Query: 1 MVNSKPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVL 60
M K +INIV IGHV+SGKSTT GHL+YKLGGI K IE KEAAEM RSFKYAWVL
Sbjct: 42 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 221
Query: 61 DKLKAERERGITIDISMCKFETTKYCCTLIDAPGHRDFI 99
DKLKAERERGITIDI++ KFETTKY CT+IDAPGHRDFI
Sbjct: 222 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 338
Score = 73.6 bits (179), Expect(2) = 4e-54
Identities = 32/54 (59%), Positives = 40/54 (73%)
Frame = +2
Query: 102 EHDHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWCEANDLLLQQ 155
EHD+ ++ S*LCCS + FH+ F SW GW+D CS C+HSWCEA+DLLLQQ
Sbjct: 341 EHDYWNIPS*LCCSYY*FHHWWF*SWYFQGWTDS*ACSPCIHSWCEADDLLLQQ 502
>TC203934 homologue to UP|Q9LN13 (Q9LN13) T6D22.2, partial (22%)
Length = 1002
Score = 271 bits (692), Expect = 5e-73
Identities = 138/215 (64%), Positives = 166/215 (77%)
Frame = +2
Query: 175 LQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQSGVKSIQKFQENINEALPADIVG 234
LQ VY IGGIGTVPVGRVETGV+KPGMV+TF PT L + VKS++ E + EALP D VG
Sbjct: 5 LQDVYNIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALTEALPGDNVG 184
Query: 235 FRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVIIINHPSVITKGYTPILDCHTSH 294
F + N + D L RG+VASNS+D+PA EAA FTS+VII+NHP I GY P+LDCHTSH
Sbjct: 185 FNVKNVAVKD--LKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSH 358
Query: 295 VAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMIPMKPMVVEGINEYPSLGRFAVR 354
+AVKF+++ TK DR +G ELEK+PK LKNGDAG+VKM+P KPMVVE +EYP LGRFAVR
Sbjct: 359 IAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVR 538
Query: 355 DMRQTVAVGVIMSVKKNGYKNKAATKMTGSTTDQK 389
DMRQTVAVGVI SV+K K+ K+T + +K
Sbjct: 539 DMRQTVAVGVIKSVEK---KDPTGAKVTKAAAKKK 634
>TC203952 homologue to UP|O81921 (O81921) Elongation factor 1-alpha (EF1-a)
(Fragment), partial (85%)
Length = 995
Score = 266 bits (680), Expect = 1e-71
Identities = 131/194 (67%), Positives = 156/194 (79%)
Frame = +2
Query: 153 LQQAIDQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQS 212
L +A+DQI+EPKRP KPLRLPLQ VYKIGGIGTVPVGRVETGV+KPGMV+TF PT L +
Sbjct: 266 LLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTT 445
Query: 213 GVKSIQKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVI 272
VKS++ E + EALP D VGF + N + D L RG+VASNS+D+PA EAA FTS+VI
Sbjct: 446 EVKSVEMHHEALTEALPGDNVGFNVKNVAVKD--LKRGFVASNSKDDPAKEAANFTSQVI 619
Query: 273 IINHPSVITKGYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMI 332
I+NHP I GY P+LDCHTSH+AVKF+++ TK DR +G ELEK+PK LKNGDAG+VKMI
Sbjct: 620 IMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGMVKMI 799
Query: 333 PMKPMVVEGINEYP 346
P KPMVVE +EYP
Sbjct: 800 PTKPMVVETFSEYP 841
Score = 35.0 bits (79), Expect = 0.066
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 133 SDLGTCSTCVHSWCEANDLLLQQ 155
+D CS+C H WCEA+DLLL Q
Sbjct: 13 ADS*ACSSCFHPWCEADDLLL*Q 81
>TC203962 homologue to UP|Q9LN13 (Q9LN13) T6D22.2, partial (18%)
Length = 695
Score = 207 bits (526), Expect = 1e-53
Identities = 107/168 (63%), Positives = 127/168 (74%)
Frame = +3
Query: 222 ENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVIIINHPSVIT 281
E + EALP D VGF + N + D L RG+VASNS+D+PA EAA FTS+VII+NHP I
Sbjct: 3 EALQEALPGDNVGFNVKNVAVKD--LKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIG 176
Query: 282 KGYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMIPMKPMVVEG 341
GY P+LDCHTSH+AVKFA+L TK DR +G E+EK+PK LKNGDAG VKMIP KPMVVE
Sbjct: 177 NGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGYVKMIPTKPMVVET 356
Query: 342 INEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNKAATKMTGSTTDQK 389
+EYP LGRFAVRDMRQTVAVGVI SV+K K+ K+T + +K
Sbjct: 357 FSEYPPLGRFAVRDMRQTVAVGVIKSVEK---KDPTGAKVTKAAQKKK 491
>TC203954 homologue to UP|EF1A_LYCES (P17786) Elongation factor 1-alpha
(EF-1-alpha), partial (61%)
Length = 1423
Score = 156 bits (395), Expect(2) = 1e-48
Identities = 77/99 (77%), Positives = 83/99 (83%)
Frame = +3
Query: 1 MVNSKPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVL 60
M K +INIV IGHV+SGKSTT GHL+YKLGGI K IE KEAAEM RSFKYAWVL
Sbjct: 432 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 611
Query: 61 DKLKAERERGITIDISMCKFETTKYCCTLIDAPGHRDFI 99
DKLKAERERGITIDI++ KFETTKY CT+IDAPGHRDFI
Sbjct: 612 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFI 728
Score = 88.6 bits (218), Expect = 5e-18
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 150 DLLLQQAIDQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTK 209
D L + + + P+ P KPLRLPLQ VYKIGGIGTVP+GRVET V+KPGMV+TF PT
Sbjct: 1069 DQLSLRLLTKSMSPRGPHDKPLRLPLQDVYKIGGIGTVPMGRVETVVVKPGMVVTFGPTG 1248
Query: 210 LQS-GVKSIQKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVAS 254
L + + ++ + + P D VGF+ K K L G+ AS
Sbjct: 1249 LTT*XLNLVRSTMXXLXKLFPGDNVGFK--XKIFQXKVLKPGFCAS 1380
Score = 55.1 bits (131), Expect(2) = 1e-48
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2
Query: 102 EHDHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWCEANDLLLQQ 155
EHD+ L LCC + H+ F SW *GW+D CS+C H CEA+DLLL Q
Sbjct: 731 EHDYWYLPGRLCCPYY*LHHWWF*SWYF*GWTDP*ACSSCFHPRCEADDLLL*Q 892
>TC203960 UP|EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-alpha),
partial (31%)
Length = 699
Score = 187 bits (474), Expect = 1e-47
Identities = 92/142 (64%), Positives = 112/142 (78%)
Frame = +1
Query: 176 QHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQSGVKSIQKFQENINEALPADIVGF 235
Q VYKIGGIGTVPVGRVETGVLKPGMV+TFAPT L + VKS++ E++ EA P D VGF
Sbjct: 1 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTTEVKSVEMHHESLTEAHPGDNVGF 180
Query: 236 RLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVIIINHPSVITKGYTPILDCHTSHV 295
+ N + D L RGYVASNS+D+PA EAA FT++VII+NHP I GY P+LDCHTSH+
Sbjct: 181 NVKNVAVKD--LKRGYVASNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHI 354
Query: 296 AVKFAKLATKFDRETGVELEKK 317
AVKFA+L TK DR +G EL+++
Sbjct: 355 AVKFAELMTKIDRRSGKELDRR 420
>AI899942 similar to PIR|S17434|S17 translation elongation factor eEF-1 alpha
chain (gene tefS1) - soybean, partial (37%)
Length = 529
Score = 128 bits (321), Expect(2) = 1e-44
Identities = 67/95 (70%), Positives = 73/95 (76%)
Frame = +2
Query: 5 KPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVLDKLK 64
K +I IV IGHV+SGKSTT GHL+YKLGGI K IE EAAEM S+KYA VLDKLK
Sbjct: 11 KVHITIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERYEMEAAEMTTMSYKYAMVLDKLK 190
Query: 65 AERERGITIDISMCKFETTKYCCTLIDAPGHRDFI 99
AERERGITIDI++ K ETTK CT IDA HRDFI
Sbjct: 191 AERERGITIDIALWKLETTKCYCTDIDAHRHRDFI 295
Score = 70.5 bits (171), Expect(2) = 1e-44
Identities = 30/52 (57%), Positives = 36/52 (68%)
Frame = +1
Query: 102 EHDHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWCEANDLLL 153
EHDH D+ S*LCCS H FHY F SW GW+D TCS +H WC+ +DL+L
Sbjct: 298 EHDH*DIPS*LCCSYH*FHYWWF*SWNFKGWTDSRTCSVLIHPWCDTHDLVL 453
>TC203949 homologue to UP|EF1A_VICFA (O24534) Elongation factor 1-alpha
(EF-1-alpha), partial (29%)
Length = 761
Score = 172 bits (435), Expect = 3e-43
Identities = 86/133 (64%), Positives = 104/133 (77%)
Frame = +2
Query: 257 EDEPAMEAAKFTSRVIIINHPSVITKGYTPILDCHTSHVAVKFAKLATKFDRETGVELEK 316
+D+ A EAA FTS+VII+NHP I GY P+LDCHTSH+AVKF+++ TK DR +G ELEK
Sbjct: 5 KDDXAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKELEK 184
Query: 317 KPKSLKNGDAGIVKMIPMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNK 376
+PK LKNGDAG+VKMIP KPMVVE +EYP LGRFAVRDMRQTVAVGVI SV+K K+
Sbjct: 185 EPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEK---KDP 355
Query: 377 AATKMTGSTTDQK 389
K+T + +K
Sbjct: 356 TGAKVTKAAAKKK 394
>BE020525 similar to PIR|S17434|S17 translation elongation factor eEF-1 alpha
chain (gene tefS1) - soybean, partial (36%)
Length = 523
Score = 129 bits (324), Expect(2) = 3e-37
Identities = 65/96 (67%), Positives = 73/96 (75%)
Frame = +2
Query: 5 KPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVLDKLK 64
K +I I GHVNSGKSTT G L+YKLGGI K IE KEA EM RSFKYAWVLD+L+
Sbjct: 11 KVHIPIEDFGHVNSGKSTTTGPLIYKLGGIDKRVIERFEKEAPEMNKRSFKYAWVLDRLQ 190
Query: 65 AERERGITIDISMCKFETTKYCCTLIDAPGHRDFIN 100
AERERGITIDI++ K +TT Y CT+IDAPG D IN
Sbjct: 191 AERERGITIDIALRKIQTTTYYCTVIDAPGPMDLIN 298
Score = 44.3 bits (103), Expect(2) = 3e-37
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 104 DHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWC 146
DH D+ *LCC+ FH+ R S + W+D GTCS +H+ C
Sbjct: 304 DHWDIPC*LCCADD*FHH*RVVSLYLQ*WTDSGTCSAVIHALC 432
>TC203945 UP|EF12_DAUCA (P34823) Elongation factor 1-alpha (EF-1-alpha),
partial (28%)
Length = 384
Score = 106 bits (264), Expect(2) = 2e-36
Identities = 51/61 (83%), Positives = 54/61 (87%)
Frame = +3
Query: 39 IEALGKEAAEMKMRSFKYAWVLDKLKAERERGITIDISMCKFETTKYCCTLIDAPGHRDF 98
IE KEAAEM RSFKYAWVLDKLKAERERGITIDI++ KFETTKY CT+IDAPGHRDF
Sbjct: 9 IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDF 188
Query: 99 I 99
I
Sbjct: 189I 191
Score = 64.7 bits (156), Expect(2) = 2e-36
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +2
Query: 102 EHDHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWCEANDLLLQQ 155
EHD+ + *LCC H FH F SW W+D CSTC+H WC+ANDLLL Q
Sbjct: 194 EHDYWNFPG*LCCPYH*FHNWWF*SWYFQRWTDSRACSTCLHPWCQANDLLL*Q 355
>AW460160 similar to GP|5917747|gb| elongation factor-1 alpha 3 {Lilium
longiflorum}, partial (29%)
Length = 412
Score = 149 bits (375), Expect = 3e-36
Identities = 75/125 (60%), Positives = 95/125 (76%)
Frame = +2
Query: 247 LMRGYVASNSEDEPAMEAAKFTSRVIIINHPSVITKGYTPILDCHTSHVAVKFAKLATKF 306
L RG+VAS S+D+PA EAA F+S+ II+NHP I GY P L CHTS +A KF+++ T
Sbjct: 2 LKRGFVASISKDDPAKEAAYFSSQFIIMNHPGQIRNGYAPGLYCHTSDIAGKFSEILTNI 181
Query: 307 DRETGVELEKKPKSLKNGDAGIVKMIPMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVIM 366
DR +G EL+ +PK LKNGDA +V+MIP KPM VE +EYPS+GR+AV D+ TVAV VIM
Sbjct: 182 DRRSGQELDNEPKFLKNGDACMVQMIPTKPMAVETFSEYPSIGRYAVMDILPTVAV*VIM 361
Query: 367 SVKKN 371
SV+KN
Sbjct: 362 SVEKN 376
>BE057687 similar to GP|29243204|db elongation factor 1A {Avicennia marina},
partial (26%)
Length = 364
Score = 144 bits (364), Expect = 6e-35
Identities = 75/119 (63%), Positives = 87/119 (73%)
Frame = +2
Query: 247 LMRGYVASNSEDEPAMEAAKFTSRVIIINHPSVITKGYTPILDCHTSHVAVKFAKLATKF 306
L+RG VASNS +PA AA F+S VII+NHP +I G P+LDCHTSH+AV FA L K
Sbjct: 2 LLRGSVASNSSADPAGGAAIFSSHVIIMNHPVLIVNGSAPVLDCHTSHIAV*FADLCAKI 181
Query: 307 DRETGVELEKKPKSLKNGDAGIVKMIPMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVI 365
DR +G EL K+P L NGDAG+V MIP KPMVV+ +E P LGR AVRDMR TV VGVI
Sbjct: 182 DRRSGKELGKEPPFLTNGDAGLVHMIPTKPMVVDSFSECPPLGRRAVRDMR*TVGVGVI 358
>BF008896 similar to GP|18419676|gb elongation factor 1-alpha {Elaeis
oleifera}, partial (35%)
Length = 562
Score = 121 bits (304), Expect(2) = 4e-34
Identities = 61/97 (62%), Positives = 71/97 (72%)
Frame = +2
Query: 3 NSKPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVLDK 62
N K +INIV +GHV+SGKSTT GHL+Y LGG I+ + KEA M RSF+ AWVL
Sbjct: 5 NEKVHINIVGLGHVDSGKSTTTGHLIYTLGGFD*RVIDRIDKEAVAMNKRSFRSAWVLYT 184
Query: 63 LKAERERGITIDISMCKFETTKYCCTLIDAPGHRDFI 99
LKA+RERGITIDI++ K TTKY CT IDAPG DFI
Sbjct: 185 LKADRERGITIDIALWKSYTTKYYCTAIDAPGRPDFI 295
Score = 41.6 bits (96), Expect(2) = 4e-34
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 102 EHDHRDLRS*LCCSSHQFHYSRFASWLV*GWSDLGTCSTCVHSWCEANDLL 152
EHD+ DL S LC + + H+ SW + W+D CS+ H C+A+DL+
Sbjct: 298 EHDYWDLTSRLCVTYY*LHH*WS*SWYLY*WTDP*ACSSSYHPMCDAHDLV 450
>AW568837 similar to GP|3319882|emb elongation factor 1-alpha (EF1-a) {Cicer
arietinum}, partial (38%)
Length = 571
Score = 138 bits (348), Expect = 4e-33
Identities = 89/192 (46%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Frame = +2
Query: 158 DQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQSGVKSI 217
D I+EPKRP KP+RLPL VYKIGGIGTVPVGRVETGV+KPGMV+TF PT L + V S
Sbjct: 2 DHINEPKRPSDKPVRLPLHDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTALTTDVNSG 181
Query: 218 QKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVIIINHP 277
+ E + EAL D GF + N + K+LMRG VA S+ A E T RV I+NH
Sbjct: 182 EMHHEALTEALRGDNGGFIVKNVAM--KDLMRGNVAYPSKVYLAKECWNLTLRVFIMNHA 355
Query: 278 SVITKGYTPILDC-HTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMIPMKP 336
GY + D H H F + T + +ELE + K D G V M P
Sbjct: 356 GQTCDGYASLTDLPHCLHCCEVF*NVETALTG*SAMELEIETTYSKTVDDGFVWMRPKWR 535
Query: 337 MVVEGINEYPSL 348
+ E I Y SL
Sbjct: 536 L*GETICAYASL 571
>BE474292 similar to SP|P25698|EF1A Elongation factor 1-alpha (EF-1-alpha).
[Soybean] {Glycine max}, partial (25%)
Length = 385
Score = 126 bits (316), Expect = 2e-29
Identities = 66/120 (55%), Positives = 80/120 (66%)
Frame = +2
Query: 261 AMEAAKFTSRVIIINHPSVITKGYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKS 320
A EA + V+I+NHP I G P+L+CHTSH+A FA+L TK DR + +ELEK+PK
Sbjct: 8 ANEADHYPCHVMILNHPRHIGHGSAPVLNCHTSHIADMFAELITKIDRRSRIELEKEPKF 187
Query: 321 LKNGDAGIVKMIPMKPMVVEGINEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNKAATK 380
LKN DAG V MI KPM VE + YP L RFAV+DMRQTVA GVI + +KN TK
Sbjct: 188 LKNRDAGFVMMISTKPMAVETFSVYPPLCRFAVKDMRQTVAEGVITNDEKNDSTGANVTK 367
>AW432755 similar to PIR|S17434|S17 translation elongation factor eEF-1 alpha
chain (gene tefS1) - soybean, partial (22%)
Length = 310
Score = 122 bits (305), Expect = 4e-28
Identities = 61/95 (64%), Positives = 71/95 (74%)
Frame = +2
Query: 5 KPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSAIEALGKEAAEMKMRSFKYAWVLDKLK 64
K +I+I IGHV+SGKSTT GHL+YKL I K IE L E+A+M SFKYAWVLDKL
Sbjct: 11 KVHISIEVIGHVDSGKSTTTGHLIYKLVSIDKRVIERLENESADMNNMSFKYAWVLDKL* 190
Query: 65 AERERGITIDISMCKFETTKYCCTLIDAPGHRDFI 99
AERERGITIDI+ + T+Y CT+IDAPGH D I
Sbjct: 191 AERERGITIDIAFVELGATQYYCTVIDAPGHMDLI 295
>BF070487 weakly similar to GP|7230393|gb|A elongation factor 1 alpha {Zea
mays}, partial (17%)
Length = 403
Score = 119 bits (299), Expect = 2e-27
Identities = 68/135 (50%), Positives = 81/135 (59%)
Frame = +2
Query: 156 AIDQISEPKRPEGKPLRLPLQHVYKIGGIGTVPVGRVETGVLKPGMVLTFAPTKLQSGVK 215
A+D I++P P KPL LPL VY I GIGT P GRV+TGV KP MV+T PT L S V
Sbjct: 5 ALDPINDP*MPSNKPLMLPLWDVYIIHGIGTEP*GRVDTGVGKPVMVVTLGPTALTSEVN 184
Query: 216 SIQKFQENINEALPADIVGFRLTNKTLSDKNLMRGYVASNSEDEPAMEAAKFTSRVIIIN 275
+ + ALP D V + N +L D N R +VA NS D+PA E A FT V+IIN
Sbjct: 185 YVVMLHAALTYALPRDHVALTVRNDSLDDLN--RRFVALNSTDDPADEPADFTYHVLIIN 358
Query: 276 HPSVITKGYTPILDC 290
HP I Y P+LDC
Sbjct: 359 HPGHIAFVYAPVLDC 403
>TC203963 similar to UP|Q8SAT1 (Q8SAT1) Elongation factor 1 alpha (Fragment),
partial (24%)
Length = 626
Score = 117 bits (294), Expect = 8e-27
Identities = 59/107 (55%), Positives = 74/107 (69%)
Frame = +1
Query: 283 GYTPILDCHTSHVAVKFAKLATKFDRETGVELEKKPKSLKNGDAGIVKMIPMKPMVVEGI 342
G+ P+LD HTSH+ VKF + T R +G EL K+PK LKN DAG+ M+P PMVV+
Sbjct: 1 GHAPVLDRHTSHIPVKFCAILTTLPRRSGKELHKEPKFLKNADAGLAHMVPSTPMVVDTF 180
Query: 343 NEYPSLGRFAVRDMRQTVAVGVIMSVKKNGYKNKAATKMTGSTTDQK 389
+EYP LGRFAVRDMRQTVAVGVI SV+K K+ K+T + +K
Sbjct: 181 SEYPPLGRFAVRDMRQTVAVGVIKSVEK---KDPTGAKVTKAAAKKK 312
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,426,553
Number of Sequences: 63676
Number of extensions: 245427
Number of successful extensions: 1221
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of query: 436
length of database: 12,639,632
effective HSP length: 100
effective length of query: 336
effective length of database: 6,272,032
effective search space: 2107402752
effective search space used: 2107402752
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Medicago: description of AC135415.3