BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135319.10 + phase: 1 /pseudo/partial
(430 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BE347362 253 9e-68
CA853121 229 2e-60
TC220131 similar to UP|ATK2_ARATH (P46864) Kinesin 2 (Kinesin-li... 141 5e-34
TC217729 similar to UP|Q9CAC9 (Q9CAC9) Kinesin-like protein; 736... 121 7e-30
BE440889 105 3e-23
TC219629 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-li... 96 3e-20
AI939178 similar to GP|18087642|gb AT5g27950/F15F15_20 {Arabidop... 95 7e-20
TC207336 similar to UP|O24147 (O24147) Kinesin-like protein, par... 92 6e-19
TC214300 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-li... 89 5e-18
AW132507 80 1e-15
BI785814 similar to GP|11761076|db kinesin-like protein {Oryza s... 75 4e-14
TC215161 similar to UP|Q6NQ77 (Q6NQ77) At4g05190, partial (19%) 64 3e-11
TC215162 similar to UP|Q9M0X6 (Q9M0X6) Kinesin-like protein, par... 66 3e-11
TC230674 homologue to UP|Q9M0X6 (Q9M0X6) Kinesin-like protein, p... 65 6e-11
TC230398 homologue to UP|O24147 (O24147) Kinesin-like protein, p... 62 4e-10
AW508613 similar to GP|14595705|gb kinesin-like protein {Oryza s... 59 6e-09
TC208307 weakly similar to UP|Q9AVP5 (Q9AVP5) BY-2 kinesin-like ... 55 5e-08
CO982329 52 7e-07
AW756138 similar to GP|6056195|gb|A kinesin-like protein {Arabid... 50 3e-06
TC227748 similar to UP|Q940Y8 (Q940Y8) AT3g16060/MSL1_10, partia... 45 5e-05
>BE347362
Length = 448
Score = 253 bits (647), Expect = 9e-68
Identities = 124/149 (83%), Positives = 137/149 (91%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 NFESNSE-ELQVVCSDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYG 113
NFES+S+ ELQV+C+DSSKKQFKFDHVF PEDNQE VF QTKPIV SVLDG+NVCIFAYG
Sbjct: 1 NFESSSDNELQVICADSSKKQFKFDHVFGPEDNQETVFQQTKPIVTSVLDGYNVCIFAYG 180
Query: 114 QTGTGKTFTMEGTPEHRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAG 173
QTGTGKTFTMEGTPEHRGVNYRTLEELFR++EER GT+KYEL VSMLEVYNEKI+DLL
Sbjct: 181 QTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERHGTMKYELSVSMLEVYNEKIRDLLVE 360
Query: 174 NSSEATKKLEVKQAADGTQEVPGLVETHV 202
NS++ TKKLE+KQAA+GTQEVPGLVE V
Sbjct: 361 NSTQPTKKLEIKQAAEGTQEVPGLVEARV 447
>CA853121
Length = 677
Score = 229 bits (584), Expect = 2e-60
Identities = 137/236 (58%), Positives = 162/236 (68%)
Frame = +3
Query: 186 QAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHWQIFYIIVDDK 245
QA DGTQEVPGL+E VYG VWE LKSGN+ RSVGSTSANELSSRSH + ++ +
Sbjct: 12 QAVDGTQEVPGLIEARVYGTVDVWEKLKSGNQARSVGSTSANELSSRSHCLLRVTVLGEN 191
Query: 246 KMVLHAVWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG*RNLSS*ISLYH 305
+++ LW + +A ++V G+ +LKE N S +S
Sbjct: 192 --LINGQKTRSHLW--LVDLAGSERVG-------KTEAEGE-RLKESQFINKS--LSALG 329
Query: 306 HLVMLLQPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNF 365
++ L ++ ++ RNSKLTHILQSSLGGDCKTLMFVQISP + DLTETLCSLNF
Sbjct: 330 DVISALA----SKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPGAADLTETLCSLNF 497
Query: 366 ATRVRGIESGPARKQVDLTELLKYKQMAEKSKHDEKEARKLQDNLQSVQMRLATRE 421
ATRVRGIESGPARKQ DLTEL KYKQM EK KHDEKE RKLQDNLQ++QMRL TRE
Sbjct: 498 ATRVRGIESGPARKQTDLTELNKYKQMVEKVKHDEKETRKLQDNLQAMQMRLTTRE 665
>TC220131 similar to UP|ATK2_ARATH (P46864) Kinesin 2 (Kinesin-like protein
B), partial (37%)
Length = 1044
Score = 141 bits (356), Expect = 5e-34
Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 6/170 (3%)
Frame = +3
Query: 9 KYLEVSLERRRLNNEVIELKGNIRVFCRCRPLNENEIAN--GSAVSVVNFESNSEELQVV 66
K +E R++L+N ++ELKGNIRVFCR RPL +E + G S S +
Sbjct: 114 KLIEGERLRKKLHNTILELKGNIRVFCRVRPLLADESCSTEGRIFSYPTSMETSGRAIDL 293
Query: 67 CSDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGT 126
+ K F FD VF PE +QE VF + +V S LDG+ VCIFAYGQTG+GKT+TM G
Sbjct: 294 AQNGQKHAFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGR 473
Query: 127 PEH---RGVNYRTLEELFRVSEERQGT-IKYELLVSMLEVYNEKIKDLLA 172
P H +G+ R+LE++F+ + +Q KYE+ VSMLE+YNE I+DL++
Sbjct: 474 PGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLIS 623
>TC217729 similar to UP|Q9CAC9 (Q9CAC9) Kinesin-like protein; 73641-79546,
partial (26%)
Length = 1075
Score = 121 bits (304), Expect(2) = 7e-30
Identities = 99/315 (31%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Frame = +1
Query: 119 KTFTMEG----TPEHRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGN 174
KT+TM G + GVNYR L +LF +S+ R+ +I YE+ V M+E+YNE+++DLL+ N
Sbjct: 37 KTYTMSGPGLSSKSDWGVNYRALHDLFHISQSRRSSIVYEVGVQMVEIYNEQVRDLLSSN 216
Query: 175 SSEATKKLEV-KQAADGTQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRS 233
+ K+L + A VP V V E++ G R+ +T+ NE SSRS
Sbjct: 217 GPQ--KRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNIGLMNRATSATALNERSSRS 390
Query: 234 HWQIFYIIVDDKKMVLHAVWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG 293
H + + V + + + G L + +A ++V T G + LKE
Sbjct: 391 H-SVLSVHVRGTDLKTNTLLRGCL---HLVDLAGSERVDRSEAT-------GDM-LKEA- 531
Query: 294 *RNLSS*ISLYHHLVMLLQPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSS 353
++++ +S ++ L + +++ RNSKLT +LQSSLGG KTLMFVQ++P
Sbjct: 532 -QHINKSLSALGDVIFALS----QKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDV 696
Query: 354 VDLTETLCSLNFATRVRGIESGPARKQVDLTELLKYKQMAEKSKHDEKEARKLQDNLQSV 413
+ET+ +L FA RV G+E G AR S + ++ R+L + L S+
Sbjct: 697 ASYSETVSTLKFAERVSGVELGAAR-----------------SNKEGRDVRELMEQLASL 825
Query: 414 QMRLATREFMCRNLQ 428
+ +A ++ LQ
Sbjct: 826 KDVIARKDEEIERLQ 870
Score = 27.3 bits (59), Expect(2) = 7e-30
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 108 CIFAYGQTGTGKTFTMEGT 126
CIFAYGQTG+ K E T
Sbjct: 3 CIFAYGQTGSXKDIYDEWT 59
>BE440889
Length = 484
Score = 105 bits (263), Expect = 3e-23
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +2
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L + +++ RNSKLTH+LQ SLGGD KTLMFVQISPS D+ ETL SLNFATRVRG+E
Sbjct: 212 LAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVEL 391
Query: 375 GPARKQVDLTELLKYKQMAEKSKHD 399
GP +KQ+D +E+ K K M EK++ +
Sbjct: 392 GPVKKQIDTSEVQKMKAMLEKARSE 466
>TC219629 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-like protein
A), partial (26%)
Length = 923
Score = 95.9 bits (237), Expect = 3e-20
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 7/249 (2%)
Frame = +1
Query: 139 ELFRVSEE-RQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEVKQAADGTQEV--- 194
E+F+ S+ + KY + VS+ E+YNE I+DLL+ N S + +A +
Sbjct: 7 EIFQTSQSLKDQGWKYTMHVSIYEIYNETIRDLLSSNRSSGNDHTRTENSAPTPSKQHTI 186
Query: 195 ---PGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHWQIFYIIVDDKKMVLHA 251
L V A+ + +L+ + RSVG T NE SSRSH+ +F + + +
Sbjct: 187 KHESDLATLEVCSAEEISSLLQQAAQSRSVGRTQMNEQSSRSHF-VFKLRISGRNEKTEK 363
Query: 252 VWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG*RNLSS*ISLYHHLVMLL 311
G L + +A ++++ T +LK + ++LSS + L
Sbjct: 364 QVQGVL---NLIDLAGSERLSRSGATG------DRLKETQAINKSLSSLSDVIFALA--- 507
Query: 312 QPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRG 371
+ ++ RNSKLTH LQ LGGD KTLMFV ISP E+LCSL FA RV
Sbjct: 508 -----KKEEHVPFRNSKLTHFLQPYLGGDSKTLMFVNISPDQSSAGESLCSLRFAARVNA 672
Query: 372 IESGPARKQ 380
E G R+Q
Sbjct: 673 CEIGIPRRQ 699
>AI939178 similar to GP|18087642|gb AT5g27950/F15F15_20 {Arabidopsis
thaliana}, partial (19%)
Length = 406
Score = 94.7 bits (234), Expect = 7e-20
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Frame = +3
Query: 90 VFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRVSEERQG 149
VF + +PI+ S +DGHNVC+FAYGQTGTGKTFTM+GT + G+ R LEELFR
Sbjct: 6 VFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNQEPGIIPRALEELFR-QASLDN 182
Query: 150 TIKYELLVSMLEVYNEKIKDLLAGNSS------EATK-KLEVKQAADGTQEVPGLVETHV 202
+ + +SMLEVY ++DLL+ S TK L ++ G E+ GL E +
Sbjct: 183 SSSFTFTMSMLEVYMGNLRDLLSPRQSGRPHEQYMTKCNLNIQTDPKGLIEIEGLSEVQI 362
>TC207336 similar to UP|O24147 (O24147) Kinesin-like protein, partial (22%)
Length = 1055
Score = 91.7 bits (226), Expect = 6e-19
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 1/292 (0%)
Frame = +3
Query: 131 GVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEVKQAADG 190
G+ R + ELFR+ + L M+E+Y + + DLL + + K L++K+ + G
Sbjct: 9 GLTPRAIAELFRILRRDNNKYSFSLKAYMVELYQDTLIDLLLPKNGKPLK-LDIKKDSTG 185
Query: 191 TQEVPGLVETHVYGADGVWEILKSGNRVRSVGSTSANELSSRSHWQIFYIIVDDKKMVLH 250
V + + + + I++ G+ R + T N+ SSRSH I I+++ +
Sbjct: 186 MVVVENVTVMSISTIEELNSIIQRGSERRHISGTQMNDESSRSHL-ILSIVIESTNLQSQ 362
Query: 251 AVWCG*LLWGKI*SMAREQKVTFG*LT*LAVSV*GKLKLKEKG*RNLSS*ISLYHHLVML 310
+V G L + + R +K G + K ++++ +S ++
Sbjct: 363 SVAKGKLSFVDLAGSERVKKS-------------GSTGSQLKEAQSINKSLSALGDVISS 503
Query: 311 LQPLLPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVR 370
L + P RN KLT ++ SLGG+ KTLMFV ++P+ +L ET SL +A+RVR
Sbjct: 504 LSSGGQHTPY----RNHKLTMLMSDSLGGNAKTLMFVNVAPTESNLDETNNSLMYASRVR 671
Query: 371 GIESGPARKQVDLTELLKYKQMAEKSKHDEKEARKLQ-DNLQSVQMRLATRE 421
I + P K V E+ + K++ K ++ R L+ D+L+ +Q T+E
Sbjct: 672 SIVNDP-NKNVSSKEVARLKKLVAYWK--QQAGRTLEYDDLEEIQDERPTKE 818
>TC214300 similar to UP|ATK1_ARATH (Q07970) Kinesin 1 (Kinesin-like protein
A), partial (27%)
Length = 903
Score = 88.6 bits (218), Expect = 5e-18
Identities = 74/236 (31%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Frame = +2
Query: 162 VYNEKIKDLLAGNSSEAT------------KKLEVKQAADGTQEVPGLVETHVYGADGVW 209
+YNE I+DLLA N S A K+ +K A+G V L V V
Sbjct: 2 IYNETIRDLLATNKSSADGTPTRVENGTPGKQYMIKHDANGNTHVSDLTVVDVQSVKEVA 181
Query: 210 EILKSGNRVRSVGSTSANELSSRSHWQI---FYIIVDDKKMVLHAVWCG*LLWGKI*SMA 266
+L RSVG T NE SSRSH+ Y + + + + + +A
Sbjct: 182 FLLNQAASSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGIL-------NLIDLA 340
Query: 267 REQKVTFG*LT*LAVSV*GKLKLKEKG*RNLSS*ISLYHHLVMLLQPLLPNQPTYLTDRN 326
++++ + S +LK + ++LSS + L + ++ RN
Sbjct: 341 GSERLS------RSGSTGDRLKETQAINKSLSSLSDVIFALA--------KKEDHIPFRN 478
Query: 327 SKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVD 382
SKLT++LQ LGGD KTLMFV ISP E+LCSL FA+RV E G R+ +
Sbjct: 479 SKLTYLLQPCLGGDSKTLMFVNISPDQASSGESLCSLRFASRVNACEIGTPRRHTN 646
>AW132507
Length = 196
Score = 80.5 bits (197), Expect = 1e-15
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +2
Query: 68 SDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGHNVCIFAYGQTGTGKTFTMEGT 126
S S+KK F FD V+ P+D+Q + + T IV SVL+G+NVCIF+YGQTGTGKTFTMEGT
Sbjct: 11 SGSTKKSFIFDRVYTPKDDQLDLCSYTSSIVISVLNGYNVCIFSYGQTGTGKTFTMEGT 187
>BI785814 similar to GP|11761076|db kinesin-like protein {Oryza sativa
(japonica cultivar-group)}, partial (19%)
Length = 421
Score = 75.5 bits (184), Expect = 4e-14
Identities = 48/127 (37%), Positives = 70/127 (54%), Gaps = 2/127 (1%)
Frame = +3
Query: 110 FAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRVSEERQGTIKYELLVSMLEVYNEKIKD 169
FAYGQTG+GKT+TM+ P + ++ R+ ++L VS E+Y K+ D
Sbjct: 6 FAYGQTGSGKTYTMKPLP------LKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFD 167
Query: 170 LLAGNSSEATKKLEVKQAADGTQEV--PGLVETHVYGADGVWEILKSGNRVRSVGSTSAN 227
LL KKL +++ DG Q+V GL E V + + ++++ GN RS G+T AN
Sbjct: 168 LLNDR-----KKLCMRE--DGKQQVCIVGLQEYRVSDVENIKDLIEKGNSTRSTGTTGAN 326
Query: 228 ELSSRSH 234
E SSRSH
Sbjct: 327 EESSRSH 347
>TC215161 similar to UP|Q6NQ77 (Q6NQ77) At4g05190, partial (19%)
Length = 692
Score = 63.9 bits (154), Expect(2) = 3e-11
Identities = 33/68 (48%), Positives = 43/68 (62%)
Frame = +2
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L + ++ RNSKLT++LQ LGG TLMFV ISP + E+LCSL FA+RV E
Sbjct: 254 LAKKEDHVPFRNSKLTYLLQPCLGGYSNTLMFVNISPDPSSVGESLCSLRFASRVNACEI 433
Query: 375 GPARKQVD 382
G R+Q +
Sbjct: 434 GTPRRQTN 457
Score = 21.9 bits (45), Expect(2) = 3e-11
Identities = 10/21 (47%), Positives = 12/21 (56%)
Frame = +3
Query: 293 G*RNLSS*ISLYHHLVMLLQP 313
G*+ L +YHH VML P
Sbjct: 192 G*KKLKQSTKVYHH*VMLYLP 254
>TC215162 similar to UP|Q9M0X6 (Q9M0X6) Kinesin-like protein, partial (9%)
Length = 814
Score = 65.9 bits (159), Expect = 3e-11
Identities = 33/56 (58%), Positives = 39/56 (68%)
Frame = +1
Query: 325 RNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQ 380
RNSKLT++LQ LGGD KTLM V ISP + E+LCSL FA+RV E G R+Q
Sbjct: 1 RNSKLTYLLQPCLGGDSKTLMSVNISPDPSSIGESLCSLRFASRVNACEIGTPRRQ 168
>TC230674 homologue to UP|Q9M0X6 (Q9M0X6) Kinesin-like protein, partial (20%)
Length = 811
Score = 65.1 bits (157), Expect = 6e-11
Identities = 35/72 (48%), Positives = 42/72 (57%)
Frame = +1
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L + ++ RNSKLT++LQ LGGD KTLMFV ISP E+LCSL FA V E
Sbjct: 328 LAKKQEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAAGVNACEI 507
Query: 375 GPARKQVDLTEL 386
G R+Q L
Sbjct: 508 GIPRRQTSTRSL 543
>TC230398 homologue to UP|O24147 (O24147) Kinesin-like protein, partial (10%)
Length = 599
Score = 62.4 bits (150), Expect = 4e-10
Identities = 40/98 (40%), Positives = 59/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 325 RNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLT 384
RN KLT ++ SLGG+ KTLMFV +SP L ET SL +A+RVR I + P+ K V
Sbjct: 90 RNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPS-KNVSSK 266
Query: 385 ELLKYKQMAEKSKHDEKEARKLQD-NLQSVQMRLATRE 421
E+ + K++ K E+ R+ +D +L+ +Q T+E
Sbjct: 267 EIARLKKLIGYWK--EQAGRRGEDEDLEEIQEERPTKE 374
>AW508613 similar to GP|14595705|gb kinesin-like protein {Oryza sativa},
partial (18%)
Length = 445
Score = 58.5 bits (140), Expect = 6e-09
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = +1
Query: 72 KKQFKFDHVFKPEDNQEAVFAQT-KPIVASVLDGHNVCIFAYGQTGTGKTFTMEGTPEHR 130
K +F FD V + V+ T +PI+ ++ + FAYGQTG+GKT+TM+ P
Sbjct: 109 KHEFCFDAVLDEHVTNDEVYRSTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLP--- 279
Query: 131 GVNYRTLEELFR-VSEERQGTIKYELLVSMLEVYNEKIKDLLAGNSSEATKKLEVKQAAD 189
R E+L R + + +++L +S E+Y K+ DLL+ KKL +++ D
Sbjct: 280 ---LRAAEDLVRQLHQPVYRNQRFKLWLSYFEIYGGKLYDLLSDR-----KKLCMRE--D 429
Query: 190 GTQEV 194
G Q+V
Sbjct: 430 GRQQV 444
>TC208307 weakly similar to UP|Q9AVP5 (Q9AVP5) BY-2 kinesin-like protein 5,
partial (13%)
Length = 583
Score = 55.5 bits (132), Expect = 5e-08
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 338 GGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARK-QVDLTELLKYKQMAEKS 396
G K LM V ISPS D+ ET+CSLNFA R R IES +V K ++ E
Sbjct: 44 GYGSKVLMLVHISPSEEDVCETVCSLNFAKRARAIESNKEMPVEVKKQREKKIMELEEDI 223
Query: 397 KHDEKEARKLQDNLQSVQMRL 417
K K+ + L++ +Q ++++L
Sbjct: 224 KEAVKQRQNLREQIQKIELKL 286
>CO982329
Length = 852
Score = 51.6 bits (122), Expect = 7e-07
Identities = 54/202 (26%), Positives = 95/202 (46%), Gaps = 4/202 (1%)
Frame = -3
Query: 219 RSVGSTSANELSSRSHWQIFYIIVDDKKMVLHAVWCG*LLWGKI*SMAREQKVTFG*LT* 278
R VGST+ N LSSRSH IF + ++ CG G+ ++++ +
Sbjct: 832 RHVGSTNFNLLSSRSH-TIFSLTIESSP-------CGENNEGEAITLSQLNLID------ 695
Query: 279 LAVSV*GKLKLKEKG*RNLSS*ISLYHHLVMLLQPLLPNQPTYLTDRNSKLTHILQSSLG 338
LA S + + R S L ++ L + +++ R+SKLT +LQSSL
Sbjct: 694 LAGSESSRAETTGMRRREGSYINKSLLTLGTVISKLTEGKASHIPYRDSKLTRLLQSSLS 515
Query: 339 GDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLTELLKYKQMAEKSKH 398
G + + ++PSS + ET +L FA R + IE A+ + + K + +K +H
Sbjct: 514 GHGRISLICTVTPSSSNAEETHNTLKFAHRAKHIEIQAAQNTI-----IDEKSLIKKYQH 350
Query: 399 D----EKEARKLQDNLQSVQMR 416
+ ++E +++ + SVQ +
Sbjct: 349 EIQFLKEELEQMRQGIVSVQSK 284
>AW756138 similar to GP|6056195|gb|A kinesin-like protein {Arabidopsis
thaliana}, partial (8%)
Length = 313
Score = 49.7 bits (117), Expect = 3e-06
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +1
Query: 160 LEVYNEKIKDLLAGNSSEATKKLEVKQAADGTQEVPGLVETHVYGADGVWEILKSGNRVR 219
+E+YNE+++DLLA + ++ KLE++ D +P + V V ++K G R
Sbjct: 10 VEIYNEQVRDLLAEDKTD--NKLEIRSCNDDGLSLPDAILHSVKSPTDVMTLIKLGEVNR 183
Query: 220 SVGSTSANELSSRSH 234
+V ST+ N SSRSH
Sbjct: 184 AVSSTAMNNRSSRSH 228
>TC227748 similar to UP|Q940Y8 (Q940Y8) AT3g16060/MSL1_10, partial (34%)
Length = 1192
Score = 45.4 bits (106), Expect = 5e-05
Identities = 26/77 (33%), Positives = 41/77 (52%)
Frame = +3
Query: 315 LPNQPTYLTDRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIES 374
L N ++ R SKLT +L+ S G+ +T+M ISPS+ TL +L +A RV+ +
Sbjct: 132 LDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSK 311
Query: 375 GPARKQVDLTELLKYKQ 391
G K+ L+ K+
Sbjct: 312 GNNSKKDVLSSNFNLKE 362
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.326 0.139 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,142,641
Number of Sequences: 63676
Number of extensions: 195323
Number of successful extensions: 1240
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of query: 430
length of database: 12,639,632
effective HSP length: 100
effective length of query: 330
effective length of database: 6,272,032
effective search space: 2069770560
effective search space used: 2069770560
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC135319.10