Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135311.5 + phase: 0 
         (346 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC232907                                                              265  2e-71
TC229040 weakly similar to GB|AAP68276.1|31711840|BT008837 At3g6...   265  3e-71
TC219647                                                              263  9e-71
TC223985 similar to UP|O04696 (O04696) DNA-binding protein PD1, ...   223  8e-59
TC216613 homologue to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, p...   206  1e-53
TC216108                                                              201  4e-52
TC220538 similar to UP|Q9FHM5 (Q9FHM5) Similarity to DNA-binding...   186  1e-47
TC229041 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, par...   182  1e-46
TC216109 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, par...   178  4e-45
TC217941 similar to UP|Q9FIR1 (Q9FIR1) Similarity to AT-hook DNA...   174  7e-44
TC206704 similar to UP|Q94F52 (Q94F52) At2g33620/F4P9.39, partia...   164  7e-41
TC212904 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, par...   158  4e-39
TC216612 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, par...   157  5e-39
TC205363 similar to UP|Q9ZRR7 (Q9ZRR7) SAP1 protein, partial (59%)    153  1e-37
AI442988 similar to GP|2213534|emb| DNA-binding PD1-like protein...   120  9e-28
TC207820 similar to UP|O04696 (O04696) DNA-binding protein PD1, ...   120  9e-28
BG043009 weakly similar to GP|17979485|gb| AT4g12080/F16J13_150 ...   119  2e-27
TC229102 similar to UP|Q9LTA2 (Q9LTA2) Similarity to AT-hook DNA...   104  5e-23
TC217688 similar to UP|Q6K709 (Q6K709) DNA-binding protein-like,...    98  5e-21
TC232676 similar to UP|Q6K709 (Q6K709) DNA-binding protein-like,...    94  9e-20

>TC232907 
          Length = 762

 Score =  265 bits (678), Expect = 2e-71
 Identities = 137/195 (70%), Positives = 156/195 (79%)
 Frame = +3

Query: 1   MDHGDHMALSNSASYYMQQRVLPGSGAQPELHVSPSFNQLSNPNLPFQSNIGGGGSNIGT 60
           MD GD MALS S  YYMQQR +PGSGA PELH+SP+   +SNPNLPFQS+IGGG   IG+
Sbjct: 192 MDRGDQMALSGS--YYMQQRGIPGSGAPPELHISPNMRPISNPNLPFQSSIGGG--TIGS 359

Query: 61  TLPLESSAISSQGVNMSGHTGVPSGETVKRKRGRPRKYGADRVVSLALSPSPTPSSNPGT 120
           TLPLESSAIS+ GVN+   TG P GE VKRKRGRPRKYG D  VSLAL+P+PT SS PG 
Sbjct: 360 TLPLESSAISAHGVNVGAPTGAPPGEPVKRKRGRPRKYGTDGSVSLALTPTPTSSSYPGA 539

Query: 121 MTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQV 180
           +TQ   KRG GRPPG+GKKQQLAS GELMSGSAG GF PH+I IASGEDI  KI+ FSQ 
Sbjct: 540 LTQS-QKRGIGRPPGTGKKQQLASLGELMSGSAGMGFTPHIINIASGEDITTKIMAFSQQ 716

Query: 181 RARALCVLSSSGSVS 195
            ARA+C+LS++G+VS
Sbjct: 717 GARAVCILSANGAVS 761


>TC229040 weakly similar to GB|AAP68276.1|31711840|BT008837 At3g61310
           {Arabidopsis thaliana;} , partial (42%)
          Length = 893

 Score =  265 bits (676), Expect = 3e-71
 Identities = 131/201 (65%), Positives = 157/201 (77%)
 Frame = +3

Query: 146 GELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSIS 205
           GELMSGSAG GF PH+I IA GEDIA KI+ FSQ   RA+C+LS++G+VS+V +R+PS S
Sbjct: 6   GELMSGSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAICILSANGAVSTVTLRQPSTS 185

Query: 206 GGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPV 265
           GGT+ YEG F I+ +SG Y+  ++G +RNR   LS+SL  PDGR+ GG VGG L+AASPV
Sbjct: 186 GGTVTYEGRFEIVCLSGSYLVADSGGTRNRTVALSVSLASPDGRVIGGGVGGVLIAASPV 365

Query: 266 QVMIGSFLWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNSISPNQNLTPTSSLSPW 325
           QV++GSF WG  K K KKKE SE AE  +E+DHQ  HNP A+NSISPNQNLTPTSSLSPW
Sbjct: 366 QVILGSFSWGASKTKIKKKEGSEGAEVAMETDHQTVHNPVAVNSISPNQNLTPTSSLSPW 545

Query: 326 SAASRQMDMGNSHADIDLMRG 346
             ASR +DM NSH DIDLMRG
Sbjct: 546 -PASRPLDMRNSHIDIDLMRG 605


>TC219647 
          Length = 1007

 Score =  263 bits (672), Expect = 9e-71
 Identities = 131/195 (67%), Positives = 153/195 (78%), Gaps = 1/195 (0%)
 Frame = +1

Query: 153 AGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYE 212
           AG GF PH+I IASGEDIA KI+ F Q   R +C+LS++G+VS+V +R+PS SGGT+ YE
Sbjct: 1   AGMGFTPHIINIASGEDIATKIMAFXQQGPRVVCILSANGAVSTVTLRQPSTSGGTVTYE 180

Query: 213 GHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
           G F I+ +SG Y+ TENG SRNR GGLS+SL  PDGR+ GG VGG L+A+SPVQV++GSF
Sbjct: 181 GRFEIVCLSGSYLVTENGGSRNRTGGLSVSLASPDGRVIGGGVGGVLIASSPVQVVVGSF 360

Query: 273 LWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNSISPNQNLTPT-SSLSPWSAASRQ 331
           LWG  K KNKKKESSE AE  VESDHQG HNP +LNSIS NQNL PT  SLSPWS  SR 
Sbjct: 361 LWGGSKTKNKKKESSEGAEVAVESDHQGVHNPVSLNSISQNQNLPPTPPSLSPWS-TSRP 537

Query: 332 MDMGNSHADIDLMRG 346
           +DM NSH DIDLMRG
Sbjct: 538 LDMRNSHVDIDLMRG 582


>TC223985 similar to UP|O04696 (O04696) DNA-binding protein PD1, partial
           (59%)
          Length = 901

 Score =  223 bits (569), Expect = 8e-59
 Identities = 127/265 (47%), Positives = 174/265 (64%), Gaps = 4/265 (1%)
 Frame = +1

Query: 86  ETVKRKRGRPRKYGADRVVSLALSP-SPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQLAS 144
           E VK+KRGRPRKYG D  VSL LSP S T SS PG+ T    KR RGRPPGSG+KQQLA+
Sbjct: 1   EPVKKKRGRPRKYGPDGSVSLMLSPMSATASSTPGSGT-SSEKRPRGRPPGSGRKQQLAT 177

Query: 145 FGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSI 204
            GE M+ SAG  F PHVI +   EDI AK+L+F++ R RA+C+L+ +G++SSV +R+P+ 
Sbjct: 178 LGEWMNSSAGLAFSPHVITVGVDEDIVAKLLSFARQRPRAVCILTGTGTISSVTLRQPAS 357

Query: 205 SGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASP 264
           +   + YEG F I+ +SG Y+  E G   NR GG+S+SL  PDG + GG V   LVA+SP
Sbjct: 358 TSIGVTYEGRFQILCLSGSYLVAEEGGPHNRTGGMSVSLSSPDGHIIGGGV-TRLVASSP 534

Query: 265 VQVMIGSFLWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNSI-SPNQNLTPTSSLS 323
           VQV+  SF++G  K K K+  ++   +    S+ Q +   A+  S+  PNQN T + +  
Sbjct: 535 VQVVACSFVYGGSKPKTKQVTTTTTKD--TSSEPQSSDKLASPGSVPPPNQNYTSSPAPG 708

Query: 324 PWSAASRQMDMGNSHA--DIDLMRG 346
            W A+SR +++ ++HA   IDL RG
Sbjct: 709 IWPASSRPVEVKSAHAHTGIDLTRG 783


>TC216613 homologue to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, partial (44%)
          Length = 1790

 Score =  206 bits (524), Expect = 1e-53
 Identities = 129/342 (37%), Positives = 188/342 (54%), Gaps = 9/342 (2%)
 Frame = +2

Query: 6   HMALSNSASYYMQQRV-LPGSGAQPELHVSPSFNQLSNPNLPFQSNIGGGGSNIGTTLPL 64
           H  L+  AS  +   V + GS A  + HV+P   +  NP               G+T  +
Sbjct: 530 HKCLNMEASGGVSSGVTVVGSDAPSDYHVAP---RTDNP-----------APASGSTTQI 667

Query: 65  ESSAISSQGVNMSGHTGV----PSGETVKRKRGRPRKYGADRVVSLALSPSPTPSSNP-- 118
            ++A S+   +   HT      P+    K+KRGRPRKY  D  V++ALSP P  SS P  
Sbjct: 668 PATAGSALSPSHPPHTAAMEAYPATMPAKKKRGRPRKYAPDGSVTMALSPKPISSSAPLP 847

Query: 119 GTMTQGGPKRGRGRPPGSGKKQ--QLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILT 176
             +     KRG+ +P  S  K   +L + GE ++ S G  F PH+I + SGED+  K+++
Sbjct: 848 PVIDFSSEKRGKIKPTSSVSKAKFELENLGEWVACSVGANFTPHIITVNSGEDVTMKVIS 1027

Query: 177 FSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRD 236
           FSQ   RA+C+LS++G +SSV +R+P  SGGTL YEG F I+S+SG ++P E+G +R+R 
Sbjct: 1028FSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRS 1207

Query: 237 GGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGRLKAKNKKKESSEDAEGTVES 296
           GG+S+SL  PDGR+ GG V G LVAASPVQV++GSFL G    +  +K+  E        
Sbjct: 1208GGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKQKHE-------- 1363

Query: 297 DHQGAHNPAALNSISPNQNLTPTSSLSPWSAASRQMDMGNSH 338
                     ++S++P   + P S+L P S  S    + N +
Sbjct: 1364---------VISSVTP-AAVVPISTLDPVSILSAASSIRNDN 1459


>TC216108 
          Length = 1568

 Score =  201 bits (511), Expect = 4e-52
 Identities = 116/271 (42%), Positives = 157/271 (57%), Gaps = 10/271 (3%)
 Frame = +1

Query: 85  GETVKRKRGRPRKYGADRVVSLALSPSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQLAS 144
           G   K+KRGRPRKYG D + S+ALSP P  SS P        K+ RG+P     K     
Sbjct: 397 GTAAKKKRGRPRKYGPDGLNSMALSPIPISSSAPFANEFSSGKQ-RGKPRAMEYKLPKKV 573

Query: 145 FGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSI 204
             +L   S GT F+PH+I + +GEDI  K+++FSQ   RA+C+LS+SG +S+V +R+P  
Sbjct: 574 GVDLFGDSVGTNFMPHIIAVNTGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDS 753

Query: 205 SGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASP 264
           SGGTL YEG F I+S+SG ++PT+N  +R+R GG+S+SL  PDGR+ GG V G LVAA P
Sbjct: 754 SGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRIVGGGVAGLLVAAGP 933

Query: 265 VQVMIGSFLWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNS----------ISPNQ 314
           VQV++GSFL    + K  KK  S+ A   V      +  P   N           +  N 
Sbjct: 934 VQVVVGSFLPNNPQDKKPKKPKSDYAPANVTPSIAVSSAPPPTNGEKEDVMGGHLLHNNS 1113

Query: 315 NLTPTSSLSPWSAASRQMDMGNSHADIDLMR 345
             T  S+ SP SA  R+ +  N H+  D M+
Sbjct: 1114GTTLNSNFSPPSAFRRE-NWVNMHSMADSMK 1203


>TC220538 similar to UP|Q9FHM5 (Q9FHM5) Similarity to DNA-binding protein,
           partial (41%)
          Length = 825

 Score =  186 bits (473), Expect = 1e-47
 Identities = 101/209 (48%), Positives = 138/209 (65%), Gaps = 7/209 (3%)
 Frame = +1

Query: 84  SGETV-KRKRGRPRKYGADRVVSLALSPSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQL 142
           SG T  K+KRGRPRKYG D    +ALSP P  +S P T      KRGRG+P  S KK   
Sbjct: 97  SGSTEGKKKRGRPRKYGPD--CKVALSPMPISASIPLTGDFSAWKRGRGKPLESIKKSFK 270

Query: 143 ------ASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSS 196
                 A  G+ ++ S G  F PH++ +  GED+  KI++FSQ   +A+C+LS++G++S+
Sbjct: 271 FYEAGGAGPGDGIAYSVGANFTPHILTVNEGEDVTMKIMSFSQQGCQAICILSANGTISN 450

Query: 197 VIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVG 256
           V +R+P+ SGGTL YEG F I+S+SG Y+ TENG +++R GG+SISL  PDGR+ GG + 
Sbjct: 451 VTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAAPDGRVMGGGLA 630

Query: 257 GPLVAASPVQVMIGSFLWGRLKAKNKKKE 285
           G LVAA PVQV++ SFL G    + K K+
Sbjct: 631 GLLVAAGPVQVVVASFLPGHQLEQQKPKK 717


>TC229041 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, partial (17%)
          Length = 787

 Score =  182 bits (463), Expect = 1e-46
 Identities = 90/134 (67%), Positives = 104/134 (77%)
 Frame = +1

Query: 213 GHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
           G F I+ +SG Y+  ++G SRNR GGLS+SL  PDGR+ GG VGG L+AASPVQV++GSF
Sbjct: 46  GRFEIVCLSGSYLVADSGGSRNRTGGLSVSLASPDGRVVGGGVGGVLIAASPVQVILGSF 225

Query: 273 LWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNSISPNQNLTPTSSLSPWSAASRQM 332
            WG  K K KKKE SE AE  +E+DHQ  HNP A+NSISPNQNLTPTSSLSPW  ASR +
Sbjct: 226 SWGASKTKIKKKEGSEGAEVALETDHQTVHNPVAVNSISPNQNLTPTSSLSPW-PASRSL 402

Query: 333 DMGNSHADIDLMRG 346
           DM NSH DIDLMRG
Sbjct: 403 DMRNSHIDIDLMRG 444


>TC216109 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, partial (35%)
          Length = 1141

 Score =  178 bits (451), Expect = 4e-45
 Identities = 111/265 (41%), Positives = 153/265 (56%), Gaps = 25/265 (9%)
 Frame = +3

Query: 104 VSLALSPSPTPSSNPGTMTQGGPKRG--RGRPPGSGKKQQLASFGELMSGSAGTGFIPHV 161
           V++ALSP P  SS P +      KRG  RG      KK  L   G+L + S GT F+PH+
Sbjct: 9   VTMALSPMPISSSAPPSNDFSSGKRGKMRGMDYKPSKKVGLDYLGDLNACSDGTNFMPHI 188

Query: 162 IEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMS 221
           I + +GEDI  K+++FSQ   RA+C+LS++G +S+V +R+P  SGGTL YEG F I+S+S
Sbjct: 189 ITVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLS 368

Query: 222 GCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFL-WGRLKAK 280
           G ++PT+N  +R+R GG+S+SL  PDGR+ GG V G LVAASPVQV++GSFL   + + K
Sbjct: 369 GSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSSQQEQK 548

Query: 281 NKKKESSEDAEGTVE--------------------SDHQGAHNPAALNSISPNQNLTPTS 320
            KK +SS+ A  TV                     +   GAH     NS + N NLTP +
Sbjct: 549 IKKPKSSDYAPVTVTPAIAVSSAPPPPTNAEKEDVNVMGGAH--VLQNSGTLNSNLTPPN 722

Query: 321 SL--SPWSAASRQMDMGNSHADIDL 343
           +     W       D   S  DI++
Sbjct: 723 AFRRDNWVNMHSMPDSRKSATDINI 797


>TC217941 similar to UP|Q9FIR1 (Q9FIR1) Similarity to AT-hook DNA-binding
           protein, partial (48%)
          Length = 1479

 Score =  174 bits (440), Expect = 7e-44
 Identities = 99/230 (43%), Positives = 139/230 (60%), Gaps = 14/230 (6%)
 Frame = +1

Query: 89  KRKRGRPRKYGADRVVSLALSPSPT--PSS----------NPGTMTQGGP-KRGRGRPPG 135
           K+KRGRPRKY  D  ++L L+P+ T  P+S          + GT +   P K+ RGRPPG
Sbjct: 364 KKKRGRPRKYSPDGSIALGLAPTHTSPPASAAAGGGSAGDSAGTASADAPAKKHRGRPPG 543

Query: 136 SGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVS 195
           SGKKQ  A       G+ G GF PHVI + SGEDI AKI+ FSQ   R +C+LS+ G++ 
Sbjct: 544 SGKKQLDAL------GAGGVGFTPHVIMVESGEDITAKIMAFSQQGPRTVCILSAIGAIG 705

Query: 196 SVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAV 255
           +V +R+P++SGG   YEG F I+S+SG    +EN   R+R   L+++L G DGR+ GG V
Sbjct: 706 NVTLRQPAMSGGIATYEGRFEIISLSGSLQQSENNGDRSRTCTLNVTLAGSDGRVLGGGV 885

Query: 256 GGPLVAASPVQVMIGSFL-WGRLKAKNKKKESSEDAEGTVESDHQGAHNP 304
            G L AAS VQV++GSF+ + +  + +  K  S  A     ++    H+P
Sbjct: 886 AGTLTAASTVQVIVGSFIAFAKKSSSSALKSGSSSAPPPXNANLWCTHDP 1035


>TC206704 similar to UP|Q94F52 (Q94F52) At2g33620/F4P9.39, partial (28%)
          Length = 1556

 Score =  164 bits (414), Expect = 7e-41
 Identities = 114/330 (34%), Positives = 169/330 (50%), Gaps = 33/330 (10%)
 Frame = +1

Query: 28  QPELHVSPSFNQLSNPNLPFQS-----NIGGGGSNIGTTLPLESSAISSQGVNMSGHTGV 82
           QP+LH +   +  ++    F       NI GG S+      L        G+       V
Sbjct: 181 QPQLHQNMRMDYAADGTAVFAPPTVTVNINGGDSSPAVPPGL--------GLPQPQPMMV 336

Query: 83  PSGETVKRKRGRPRKYGADRVVSLALSPSPTP-------SSNPGTMTQG--------GPK 127
            S E +KRKRGRPRKYG D  ++L    + TP         + G    G        G  
Sbjct: 337 NSPEPIKRKRGRPRKYGPDGGMTLGALKTTTPPGGGVPVGQSGGAFPAGPLSDSASAGTV 516

Query: 128 RGRGRPPGS-GKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALC 186
           + RGRP GS  K ++  S         G+ F PHVI + +GED++A+I+T SQ  +R +C
Sbjct: 517 KRRGRPRGSVNKNKKNDSSNSSKYSGPGSWFTPHVITVNAGEDLSARIMTISQSSSRNIC 696

Query: 187 VLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGP 246
           +L+++G++S+V +R+P+ SGGT+ YEG F I+S+ G +      +   R GGLS+SL GP
Sbjct: 697 ILTANGAISNVTLRQPASSGGTVTYEGRFEILSLGGSFFL----AGTERAGGLSVSLSGP 864

Query: 247 DGRLFGGAVGGPLVAASPVQVMIGSF-------LWGRLKAKNKK-----KESSEDAEGTV 294
           DGR+ GG V G L+AASPVQ+++ SF       L    K +N+K      +SS  + GT+
Sbjct: 865 DGRVLGGGVAGLLIAASPVQIVLASFVSDVRKHLKRAKKTENEKVSTAGGQSSSPSRGTL 1044

Query: 295 ESDHQGAHNPAALNSISPNQNLTPTSSLSP 324
                G  + + LN  +   N T  +S +P
Sbjct: 1045SESSGGVGSGSPLNQSTGACNNTIENSTTP 1134


>TC212904 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, partial (35%)
          Length = 464

 Score =  158 bits (399), Expect = 4e-39
 Identities = 74/134 (55%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
 Frame = +1

Query: 152 SAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKY 211
           S G  F PHV+ + +GED+  KI+TFSQ  +RA+C+LS++G++S+V +R+PS  GGTL Y
Sbjct: 55  SVGANFTPHVLTVNAGEDVTMKIMTFSQQGSRAICILSATGTISNVTLRQPSSCGGTLTY 234

Query: 212 EGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGS 271
           EG F I+S+SG ++PTENG +R+R GG+S+SL GPDGR+ GG + G LVAA PVQV++ S
Sbjct: 235 EGRFEILSLSGSFMPTENGVTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVAS 414

Query: 272 FLWG-RLKAKNKKK 284
           FL G +L+ K KK+
Sbjct: 415 FLPGHQLEHKTKKQ 456


>TC216612 similar to UP|Q8VYJ2 (Q8VYJ2) AT4g12080/F16J13_150, partial (37%)
          Length = 906

 Score =  157 bits (398), Expect = 5e-39
 Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 3/206 (1%)
 Frame = +3

Query: 141 QLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIR 200
           +L + GE    S      PH+  + SGED+  K+++FSQ   RA+C+LS++G +SSV +R
Sbjct: 18  ELENLGEXXXCSXXANXTPHIXXVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLR 197

Query: 201 EPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLV 260
           +P  SGGTL YEG F I+S+SG ++P+E+G +R+R GG+S+SL  PDGR+ GG V G LV
Sbjct: 198 QPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLV 377

Query: 261 AASPVQVMIGSFLWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAA---LNSISPNQNLT 317
           AASPVQV++GSFL G    +  +K+  E     +         PAA   ++++ P   L+
Sbjct: 378 AASPVQVVVGSFLAGNQHEQKPRKQRHEVITSVI---------PAAVVPISTLDPVPILS 530

Query: 318 PTSSLSPWSAASRQMDMGNSHADIDL 343
             SS+   + ++   +  N  ADI++
Sbjct: 531 AASSIRNDNWSAMPAEAKNKPADINV 608


>TC205363 similar to UP|Q9ZRR7 (Q9ZRR7) SAP1 protein, partial (59%)
          Length = 1352

 Score =  153 bits (386), Expect = 1e-37
 Identities = 94/253 (37%), Positives = 139/253 (54%)
 Frame = +3

Query: 86  ETVKRKRGRPRKYGADRVVSLALSPSPTPSSNPGTMTQGGPKRGRGRPPGSGKKQQLASF 145
           E  KRKRGRPRKYG     +LA   + T SS   +  +            +  K+ L+  
Sbjct: 225 EPAKRKRGRPRKYGTPEQ-ALAAKKAATTSSQSFSADKKPHSPTFPSSSFTSSKKSLS-- 395

Query: 146 GELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSIS 205
                G+AG GF PHVI +A+GED+  KI+ F Q   R +C+LS+SGS+S+  +R+P+ S
Sbjct: 396 --FALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATS 569

Query: 206 GGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPV 265
           GG++ YEG F I+S++G YV  E G+   R GGLS+ L   DG++ GG VGGPL AA PV
Sbjct: 570 GGSIAYEGRFEIISLTGSYVRNELGT---RTGGLSVCLSNTDGQIIGGGVGGPLKAAGPV 740

Query: 266 QVMIGSFLWGRLKAKNKKKESSEDAEGTVESDHQGAHNPAALNSISPNQNLTPTSSLSPW 325
           QV++G+F        + KK++    +G   +    +     ++S+   Q++  +SS +P 
Sbjct: 741 QVIVGTFF------IDNKKDNGAGLKGDASASKLPSPVSEPVSSLGFRQSV-DSSSGNPI 899

Query: 326 SAASRQMDMGNSH 338
                   M  SH
Sbjct: 900 RGNDEHQAMDGSH 938


>AI442988 similar to GP|2213534|emb| DNA-binding PD1-like protein {Pisum
           sativum}, partial (8%)
          Length = 325

 Score =  120 bits (301), Expect = 9e-28
 Identities = 68/111 (61%), Positives = 78/111 (70%)
 Frame = +1

Query: 26  GAQPELHVSPSFNQLSNPNLPFQSNIGGGGSNIGTTLPLESSAISSQGVNMSGHTGVPSG 85
           G QPELH SP+   LSN NLPFQS+IGGGG+ IG+TLPLESS IS+  VN+S  +G   G
Sbjct: 1   GNQPELHNSPNIRPLSNSNLPFQSSIGGGGT-IGSTLPLESSGISAPCVNVSAPSGAVPG 177

Query: 86  ETVKRKRGRPRKYGADRVVSLALSPSPTPSSNPGTMTQGGPKRGRGRPPGS 136
           ETVKRKRGRPRKYG D  V    S +     +PG + Q G KRGRGRPP S
Sbjct: 178 ETVKRKRGRPRKYGPDGAVRCIDSDT---GYHPGALAQ-GQKRGRGRPPWS 318


>TC207820 similar to UP|O04696 (O04696) DNA-binding protein PD1, partial
           (38%)
          Length = 830

 Score =  120 bits (301), Expect = 9e-28
 Identities = 65/176 (36%), Positives = 99/176 (55%), Gaps = 1/176 (0%)
 Frame = +3

Query: 172 AKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGS 231
           AK+L+ SQ R+  LC++S +G+VSSV +R+P+ +  ++ +EG F I+ +SG Y+  E+G 
Sbjct: 6   AKLLSLSQQRSTTLCIMSGTGTVSSVTLRQPASTNASVTFEGRFQILCLSGSYLVAEDGG 185

Query: 232 SRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSFLWGRLKAKNKKKESSEDAE 291
             NR GG+S+SL   DG + GG V   L+A  PVQVM+ SF++G  K K+K   + +D  
Sbjct: 186 PSNRTGGISVSLSSHDGHVIGGGV-AVLIAGGPVQVMLCSFVYGGSKTKSKLGTTIKDES 362

Query: 292 GTVESDHQGAHNPAALNSISPNQNLTPTSSLSPW-SAASRQMDMGNSHADIDLMRG 346
                 H       A     P QN  P S+ + W  +   ++   + H  IDL RG
Sbjct: 363 SEPPPQHNDKLASPASAPAPPGQNYLPLSATNLWPGSRPAELKSTHMHTGIDLTRG 530


>BG043009 weakly similar to GP|17979485|gb| AT4g12080/F16J13_150 {Arabidopsis
           thaliana}, partial (25%)
          Length = 310

 Score =  119 bits (298), Expect = 2e-27
 Identities = 55/92 (59%), Positives = 72/92 (77%)
 Frame = +3

Query: 169 DIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTE 228
           DI  KI+ FSQ  ARA+C+LS++G+VS+V +R+PS SGGT+ YEG F I+ +SG Y+ T+
Sbjct: 33  DITTKIMAFSQQGARAVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEIVCLSGSYLVTD 212

Query: 229 NGSSRNRDGGLSISLLGPDGRLFGGAVGGPLV 260
           NG SRNR GGLS+SL  PDGR+ GG VGG L+
Sbjct: 213 NGGSRNRTGGLSVSLASPDGRVIGGGVGGVLI 308


>TC229102 similar to UP|Q9LTA2 (Q9LTA2) Similarity to AT-hook DNA-binding
           protein, partial (63%)
          Length = 1141

 Score =  104 bits (260), Expect = 5e-23
 Identities = 59/168 (35%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
 Frame = +1

Query: 113 TPSSNPGTMTQGGP-------KRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIA 165
           TPS+     + GG        +R RGRPPGS  K +      +++        P+++E++
Sbjct: 292 TPSTVQKANSSGGDGATIEVVRRPRGRPPGSKNKPKPPV---IITRDPEPAMSPYILEVS 462

Query: 166 SGEDIAAKILTFSQVRARALCVLSSSGSVSSVIIREPSIS-GGTLKYEGHFHIMSMSGCY 224
            G D+   I  FS+ +   +CVL+ SG+V++V +R+PS + G T+ + G F I+S+S  +
Sbjct: 463 GGNDVVEAIAQFSRRKNMGICVLTGSGTVANVTLRQPSTTPGSTVTFHGRFDILSVSATF 642

Query: 225 VPTENGSSRNRDGGLSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
           +P ++G+S     G +ISL GP G++ GG V G L+AA  V V+  SF
Sbjct: 643 LPQQSGASPAVPNGFAISLAGPQGQIVGGLVAGGLMAAGTVFVIAASF 786


>TC217688 similar to UP|Q6K709 (Q6K709) DNA-binding protein-like, partial
           (61%)
          Length = 722

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 59/154 (38%), Positives = 86/154 (55%)
 Frame = +1

Query: 119 GTMTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFS 178
           G +     +R RGRPPGS  K +   F   ++  +      HV+EIA G DIA  +  F+
Sbjct: 244 GAIDVATTRRPRGRPPGSRNKPKPPIF---VTRDSPNALRSHVMEIAVGADIADCVAQFA 414

Query: 179 QVRARALCVLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGG 238
           + R R + +LS SG+V +V +R+P+  G  +   G F I+S++G ++P   G S     G
Sbjct: 415 RRRQRGVSILSGSGTVVNVNLRQPTAPGAVMALHGRFDILSLTGSFLP---GPSPPGATG 585

Query: 239 LSISLLGPDGRLFGGAVGGPLVAASPVQVMIGSF 272
           L+I L G  G++ GG V GPL AA PV VM  +F
Sbjct: 586 LTIYLAGGQGQIVGGEVVGPLXAAGPVLVMAATF 687


>TC232676 similar to UP|Q6K709 (Q6K709) DNA-binding protein-like, partial
           (57%)
          Length = 926

 Score = 94.0 bits (232), Expect = 9e-20
 Identities = 55/146 (37%), Positives = 80/146 (54%)
 Frame = +1

Query: 127 KRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIEIASGEDIAAKILTFSQVRARALC 186
           +R RGRP GS  K          S +A      HV+EI  G D+A  I  F+  R R + 
Sbjct: 19  RRPRGRPAGSKNKXXPPIVITKESPNAXRS---HVLEIXXGSDVAESIAAFANRRHRGVS 189

Query: 187 VLSSSGSVSSVIIREPSISGGTLKYEGHFHIMSMSGCYVPTENGSSRNRDGGLSISLLGP 246
           VLS SG V++V +R+P+   G +   G F I+S+SG ++P+ + S      GL++ L G 
Sbjct: 190 VLSGSGIVANVTLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPSGAT---GLTVYLAGG 360

Query: 247 DGRLFGGAVGGPLVAASPVQVMIGSF 272
            G++ GG V G LVA+ PV V+  +F
Sbjct: 361 QGQVVGGNVAGSLVASGPVMVIAATF 438


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.311    0.130    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,469,933
Number of Sequences: 63676
Number of extensions: 208667
Number of successful extensions: 1560
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of query: 346
length of database: 12,639,632
effective HSP length: 98
effective length of query: 248
effective length of database: 6,399,384
effective search space: 1587047232
effective search space used: 1587047232
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)


Medicago: description of AC135311.5