BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135232.7 + phase: 0
(221 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC220137 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {A... 179 1e-45
TC221817 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {A... 142 9e-35
TC217288 homologue to GB|AAS76737.1|45773866|BT012250 At5g13330 ... 119 1e-27
CF806953 117 4e-27
BM094926 homologue to GP|9758388|dbj| AP2 domain transcription f... 115 2e-26
TC225489 similar to UP|Q8GTE5 (Q8GTE5) Transcription factor EREB... 114 5e-26
TC228091 similar to GB|AAM52243.1|21464577|AY120700 AT4g34410/F1... 113 8e-26
TC225486 similar to UP|Q70AB2 (Q70AB2) Ethylene transcription fa... 108 2e-24
TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, p... 106 7e-24
TC225578 similar to UP|AP23_ARATH (P42736) AP2 domain transcript... 105 2e-23
TC220487 homologue to UP|AP23_ARATH (P42736) AP2 domain transcri... 104 3e-23
TC215013 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive pro... 104 3e-23
TC208768 homologue to UP|Q75UJ4 (Q75UJ4) ERF-like protein, parti... 102 1e-22
BF324075 homologue to GP|28274830|gb| ethylene response factor 2... 102 2e-22
TC225490 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive pro... 102 2e-22
TC214297 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive eleme... 101 2e-22
TC219340 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 101 3e-22
TC206987 homologue to UP|Q75UJ4 (Q75UJ4) ERF-like protein, parti... 101 3e-22
TC204035 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 100 4e-22
TC211213 similar to PIR|T48518|T48518 transcription factor like ... 100 4e-22
>TC220137 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Arabidopsis
thaliana;} , partial (17%)
Length = 757
Score = 179 bits (453), Expect = 1e-45
Identities = 109/197 (55%), Positives = 130/197 (65%), Gaps = 12/197 (6%)
Frame = +1
Query: 34 YEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYD 93
YEYRT+N V E+ P+RKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAA+AYD
Sbjct: 19 YEYRTENVKVV-EEXPRRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAARAYD 195
Query: 94 QASLRFRGNKAKLNFPENVKLKQQQSTPTHLN--ISHSNSALLSHQPRTDPDPIVHNETL 151
QASLRFRGNKAKLNFPENV+L+QQQ P +LN ++ A+LS P VH E L
Sbjct: 196 QASLRFRGNKAKLNFPENVRLRQQQEPPLNLNPPPPPNHGAILS-----IPSTTVHTEAL 360
Query: 152 H-TLQSSNKY-YDYFNGQNFPMASLQTSVSPSASYSSSYTTTTF-------ASSFSSPQT 202
+L SSN Y + Y + FP+ SL ++ S S + + F + +SPQ
Sbjct: 361 QGSLGSSNFYEHSYSHLHEFPV-SLYDQIAESTSTTMASHHLQFLPPASPSTMTMTSPQA 537
Query: 203 TSSI-PSGLTAWPSGSS 218
SI P+ AW SG S
Sbjct: 538 PPSIYPTHPAAWSSGYS 588
>TC221817 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Arabidopsis
thaliana;} , partial (24%)
Length = 1008
Score = 142 bits (359), Expect = 9e-35
Identities = 90/197 (45%), Positives = 112/197 (56%), Gaps = 3/197 (1%)
Frame = +1
Query: 26 RSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETA 85
+S + +YEYRT +++ +RKYRGVRQRPWGKWAAEIRDPFKA RVWLGTFETA
Sbjct: 433 KSGMGNAVYEYRTRGTENVKKEEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETA 612
Query: 86 EDAAKAYDQASLRFRGNKAKLNFPENVKLKQQQSTPTHLNISHSNSALLSHQPRTDPDPI 145
E AA+AYD+A+LRFRG+KAKLNFPENV L+Q Q T + T DP
Sbjct: 613 EAAARAYDEAALRFRGSKAKLNFPENVTLRQPQFTVS-----------------TSTDPF 741
Query: 146 VHNETLHTLQSSNKYYDYFNGQNFPMAS--LQTSVS-PSASYSSSYTTTTFASSFSSPQT 202
L +N Y + MAS LQ+S+ P A+ SS + +S SS +
Sbjct: 742 -------QLSGTNLYDHRMFLTSNTMASHHLQSSLPLPPATSSSLTSPPQNITSLSSLYS 900
Query: 203 TSSIPSGLTAWPSGSSP 219
P + S SSP
Sbjct: 901 AQLPPWSASGHSSSSSP 951
>TC217288 homologue to GB|AAS76737.1|45773866|BT012250 At5g13330 {Arabidopsis
thaliana;} , partial (33%)
Length = 1315
Score = 119 bits (298), Expect = 1e-27
Identities = 73/173 (42%), Positives = 92/173 (52%), Gaps = 24/173 (13%)
Frame = +3
Query: 46 EDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAK 105
+D K+ YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAE AA AYD A+LRF+GNKAK
Sbjct: 468 DDIRKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAMAYDAAALRFKGNKAK 647
Query: 106 LNFPENVKLKQQQSTPTHLNISHSNSALLSHQPRTDPDPIVHNETLHTLQSSN------- 158
LNFPE V + T + + S S S P + +N +L N
Sbjct: 648 LNFPERVVMPIPPQTNNNNSTSSSAPTTQSSSSLPPPQSLHNNSSLSAEGFPNLEEYARL 827
Query: 159 --------------KYYDYFNGQNFPMASLQTSVSP---SASYSSSYTTTTFA 194
Y + N ++F S Q P S+S SSS T++++
Sbjct: 828 LSCSDDDDFQRVALGLYQHHNNEDFICGSSQPPPVPFFVSSSSSSSAMTSSYS 986
>CF806953
Length = 666
Score = 117 bits (293), Expect = 4e-27
Identities = 58/88 (65%), Positives = 67/88 (75%)
Frame = +3
Query: 42 NVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRG 101
N + +R+YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAE AA+AYD+A+LRFRG
Sbjct: 360 NESGGGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRG 539
Query: 102 NKAKLNFPENVKLKQQQSTPTHLNISHS 129
N+AKLNF ENV Q Q P N+ S
Sbjct: 540 NRAKLNFAENV--VQVQPPPALPNLPAS 617
>BM094926 homologue to GP|9758388|dbj| AP2 domain transcription factor-like
{Arabidopsis thaliana}, partial (25%)
Length = 453
Score = 115 bits (287), Expect = 2e-26
Identities = 57/93 (61%), Positives = 70/93 (74%), Gaps = 1/93 (1%)
Frame = -2
Query: 46 EDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAK 105
E +R YRGVRQRPWGKWA+EIRDP KA RVWLGTFETAE AA AYD+A+LRF+G KAK
Sbjct: 332 EGNVRRHYRGVRQRPWGKWASEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGTKAK 153
Query: 106 LNFPENVKLKQQQSTPTHL-NISHSNSALLSHQ 137
LNFPE V ++ T+ ++ H+++ LS Q
Sbjct: 152 LNFPERVHFSKEFGYLTNRPSLFHASATPLSDQ 54
>TC225489 similar to UP|Q8GTE5 (Q8GTE5) Transcription factor EREBP-like
protein (Fragment), partial (40%)
Length = 893
Score = 114 bits (284), Expect = 5e-26
Identities = 66/155 (42%), Positives = 87/155 (55%), Gaps = 5/155 (3%)
Frame = +2
Query: 53 YRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPE-- 110
YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD + R RG KAK+NFPE
Sbjct: 2 YRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEA 181
Query: 111 -NVKLKQQQSTPTHLNISHSNSALLSHQPRTDPDPIVHNETLHTLQSSNKYYDY--FNGQ 167
+K+ + P N+SH A +H + P+V N+Y + F G
Sbjct: 182 PGTSVKRSKVNPQE-NLSHKFGAGNNHMDLVEQKPLV-----------NQYANMASFPGS 325
Query: 168 NFPMASLQTSVSPSASYSSSYTTTTFASSFSSPQT 202
+ SL +S + +SS + +F S P+T
Sbjct: 326 GNGLTSLPSSDDVTLYFSSDQGSNSFGWSEQGPKT 430
>TC228091 similar to GB|AAM52243.1|21464577|AY120700 AT4g34410/F10M10_180
{Arabidopsis thaliana;} , partial (30%)
Length = 1025
Score = 113 bits (282), Expect = 8e-26
Identities = 54/79 (68%), Positives = 64/79 (80%), Gaps = 1/79 (1%)
Frame = +1
Query: 44 KNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNK 103
K + + K+KYRGVRQRPWGKWAAEIRDP +A RVWLGTF TAEDAA+AYD+A++ FRG +
Sbjct: 331 KKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFGTAEDAARAYDKAAIEFRGPR 510
Query: 104 AKLNFP-ENVKLKQQQSTP 121
AKLNFP + L QQS P
Sbjct: 511 AKLNFPLVDESLTLQQSEP 567
>TC225486 similar to UP|Q70AB2 (Q70AB2) Ethylene transcription factor,
partial (49%)
Length = 1458
Score = 108 bits (270), Expect = 2e-24
Identities = 64/153 (41%), Positives = 83/153 (53%), Gaps = 9/153 (5%)
Frame = +1
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
K +YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD + R RG KAK+NFP
Sbjct: 340 KNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFP 519
Query: 110 E--------NVKLKQQQSTPT-HLNISHSNSALLSHQPRTDPDPIVHNETLHTLQSSNKY 160
E K+ Q++ T N+ H SA +H + P+V S
Sbjct: 520 EAPGTSSVKRSKVNPQENLKTVQPNLGHKFSAGNNHMDLVEQKPLV---------SQYAN 672
Query: 161 YDYFNGQNFPMASLQTSVSPSASYSSSYTTTTF 193
F G + SL +S + +SS + +F
Sbjct: 673 MASFPGSGNGLRSLPSSDDATLYFSSDQGSNSF 771
>TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, partial (31%)
Length = 1156
Score = 106 bits (265), Expect = 7e-24
Identities = 59/141 (41%), Positives = 77/141 (53%), Gaps = 11/141 (7%)
Frame = +2
Query: 18 NTVTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRK--------YRGVRQRPWGKWAAEIR 69
+T TTTT + + ++ + K+ K+ YRG+RQRPWGKWAAEIR
Sbjct: 248 DTTTTTTNQPPLPDKKVVSSCEKKKKKSVSAEKKSGGRARKNVYRGIRQRPWGKWAAEIR 427
Query: 70 DPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPENV---KLKQQQSTPTHLNI 126
DP K RVWLGTF TAE+AA+AYD A+ R RG+KAKLNFP KQ+ +P
Sbjct: 428 DPHKGVRVWLGTFPTAEEAARAYDDAAKRIRGDKAKLNFPATAPPPSKKQRCLSPDTTTE 607
Query: 127 SHSNSALLSHQPRTDPDPIVH 147
S+S + + P H
Sbjct: 608 QSSSSQSTTGSTGSPPSAAFH 670
>TC225578 similar to UP|AP23_ARATH (P42736) AP2 domain transcription factor
RAP2.3 (Related to AP2 protein 3) (Cadmium-induced
protein AS30), partial (38%)
Length = 1111
Score = 105 bits (261), Expect = 2e-23
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +3
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
K YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD A++R RG+KAKLNFP
Sbjct: 345 KNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAAQAYDDAAIRIRGDKAKLNFP 524
>TC220487 homologue to UP|AP23_ARATH (P42736) AP2 domain transcription factor
RAP2.3 (Related to AP2 protein 3) (Cadmium-induced
protein AS30), partial (31%)
Length = 510
Score = 104 bits (260), Expect = 3e-23
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = +1
Query: 50 KRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
K YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD A+ R RG+KAKLNFP
Sbjct: 274 KNVYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDNAAKRIRGDKAKLNFP 453
Query: 110 EN 111
++
Sbjct: 454 DS 459
>TC215013 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein,
complete
Length = 1999
Score = 104 bits (260), Expect = 3e-23
Identities = 71/211 (33%), Positives = 100/211 (46%), Gaps = 22/211 (10%)
Frame = +3
Query: 9 GVECSSNWTNTVTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEI 68
G SSN + + G + VE + + KN+ YRG+RQRPWGKWAAEI
Sbjct: 477 GFSRSSNKAASKPLSRGSATVESKGQAEKCAKRKRKNQ------YRGIRQRPWGKWAAEI 638
Query: 69 RDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPEN----VKLKQQQSTP--- 121
RDP K RVWLGTF TAE+AA+AYD + R RG KAK+NFP+ K+ ++ P
Sbjct: 639 RDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAASSKRLKANPEAQ 818
Query: 122 --------------THLNISHSNSALLSHQPRTDPDPIVHNETLHTLQSSNKYYDYFNGQ 167
N H+ S + + P+V+ Y N
Sbjct: 819 PMKKNLNSVKPKMNQMFNFGHNLEGYYSPIDQVEQKPLVN--------------QYVNPA 956
Query: 168 NFPMASLQTS-VSPSASYSSSYTTTTFASSF 197
FP +Q S V+PSA ++ +++ ++SF
Sbjct: 957 PFPGNGVQVSPVTPSADVTAYFSSEHSSNSF 1049
>TC208768 homologue to UP|Q75UJ4 (Q75UJ4) ERF-like protein, partial (38%)
Length = 617
Score = 102 bits (255), Expect = 1e-22
Identities = 54/91 (59%), Positives = 64/91 (69%), Gaps = 3/91 (3%)
Frame = +2
Query: 22 TTTGRSQ---VEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVW 78
+T RSQ V EQ+ +N VK Q K YRG+RQRPWGKWAAEIRDP K RVW
Sbjct: 293 STLKRSQPPKVSEQV-----ENKPVKR--QRKNLYRGIRQRPWGKWAAEIRDPRKGVRVW 451
Query: 79 LGTFETAEDAAKAYDQASLRFRGNKAKLNFP 109
LGTF TAE+AA+AYD+ + + RG KAK+NFP
Sbjct: 452 LGTFNTAEEAARAYDREARKIRGKKAKVNFP 544
>BF324075 homologue to GP|28274830|gb| ethylene response factor 2
{Lycopersicon esculentum}, partial (31%)
Length = 419
Score = 102 bits (253), Expect = 2e-22
Identities = 47/75 (62%), Positives = 57/75 (75%)
Frame = +1
Query: 37 RTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQAS 96
+ +N VK Q K YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD+ +
Sbjct: 196 QVENKPVKR--QRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREA 369
Query: 97 LRFRGNKAKLNFPEN 111
+ RG KAK+NFP +
Sbjct: 370 RKIRGKKAKVNFPND 414
>TC225490 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein,
partial (64%)
Length = 865
Score = 102 bits (253), Expect = 2e-22
Identities = 52/102 (50%), Positives = 64/102 (61%)
Frame = +3
Query: 9 GVECSSNWTNTVTTTTGRSQVEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEI 68
G SSN + + G + VE + + KN+ YRG+RQRPWGKWAAEI
Sbjct: 345 GFSRSSNKAASKPLSRGSATVESKGQAEKCAKRKRKNQ------YRGIRQRPWGKWAAEI 506
Query: 69 RDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPE 110
RDP K RVWLGTF TAE+AA+AYD + R RG KAK+NFP+
Sbjct: 507 RDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPD 632
>TC214297 similar to UP|Q8S2S7 (Q8S2S7) Ethylene responsive element binding
factor 4-like protein, partial (51%)
Length = 996
Score = 101 bits (252), Expect = 2e-22
Identities = 52/99 (52%), Positives = 66/99 (66%)
Frame = +3
Query: 40 NNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRF 99
N N K + + +RGVR+RPWG++AAEIRDP K TRVWLGTF+TAEDAA+AYD A+ F
Sbjct: 84 NKNKKPSNADEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEDAARAYDVAARNF 263
Query: 100 RGNKAKLNFPENVKLKQQQSTPTHLNISHSNSALLSHQP 138
RG KAK NFP +T +LN ++N + S P
Sbjct: 264 RGPKAKTNFP----FLPDNNTNVNLNKKNNNVNVKSDSP 368
>TC219340 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (42%)
Length = 875
Score = 101 bits (251), Expect = 3e-22
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +2
Query: 43 VKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGN 102
V N + +YRGVR+RPWG++AAEIRDP K TRVWLGTF+TAE+AA+AYD A+ FRG
Sbjct: 107 VSNPTHKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGT 286
Query: 103 KAKLNFPENVKLKQQQSTPTHLNIS 127
KAK NFP + + S + L+ S
Sbjct: 287 KAKTNFPTHAAAARSPSQSSTLDSS 361
>TC206987 homologue to UP|Q75UJ4 (Q75UJ4) ERF-like protein, partial (39%)
Length = 853
Score = 101 bits (251), Expect = 3e-22
Identities = 47/79 (59%), Positives = 56/79 (70%)
Frame = +1
Query: 48 QPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLN 107
Q K YRG+RQRPWGKWAAEIRDP K RVWLGTF TAE+AA+AYD+ + + RG KAK+N
Sbjct: 139 QRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVN 318
Query: 108 FPENVKLKQQQSTPTHLNI 126
FP Q + LN+
Sbjct: 319 FPNEDDPLPQYGSCKSLNL 375
>TC204035 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (37%)
Length = 1004
Score = 100 bits (250), Expect = 4e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = +1
Query: 45 NEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKA 104
N + + +YRGVR+RPWG++AAEIRDP K TRVWLGTF+TAE+AA+AYD A+ FRG KA
Sbjct: 208 NPTRKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKA 387
Query: 105 KLNFPENVKLKQQQSTPTHLNISHSNSALLSHQPRTDP 142
K NFP + +L T +S L S P T P
Sbjct: 388 KTNFPTHAEL-----THAAARSPSQSSTLDSSSPPTPP 486
>TC211213 similar to PIR|T48518|T48518 transcription factor like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(45%)
Length = 789
Score = 100 bits (250), Expect = 4e-22
Identities = 49/108 (45%), Positives = 66/108 (60%), Gaps = 2/108 (1%)
Frame = +2
Query: 39 DNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLR 98
DNNN +N YRGVR R WGKW +EIR+P K R+WLGTF TAE AA+A+D A+L
Sbjct: 239 DNNNSRNNSNKHSVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALT 418
Query: 99 FRGNKAKLNFPENVKL--KQQQSTPTHLNISHSNSALLSHQPRTDPDP 144
+G+ A LNFPE + ++P + + + +A + PRT P P
Sbjct: 419 IKGSSAILNFPELAASLPRPASNSPRDVQAAAAKAASMEAPPRTPPSP 562
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.310 0.124 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,366,281
Number of Sequences: 63676
Number of extensions: 147358
Number of successful extensions: 1876
Number of sequences better than 10.0: 333
Number of HSP's better than 10.0 without gapping: 1712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of query: 221
length of database: 12,639,632
effective HSP length: 94
effective length of query: 127
effective length of database: 6,654,088
effective search space: 845069176
effective search space used: 845069176
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Medicago: description of AC135232.7