Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135232.5 + phase: 0 
         (812 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC210178 UP|Q8GZU8 (Q8GZU8) Ribonucleotide reductase large subun...  1472  0.0
TC218465 UP|Q8GZU9 (Q8GZU9) Ribonucleotide reductase large subun...  1451  0.0
TC234285 homologue to UP|Q8GZU8 (Q8GZU8) Ribonucleotide reductas...   273  2e-73
BM890817 GP|27261142|g ribonucleotide reductase large subunit A ...   223  3e-58
BI316104 GP|27261142|g ribonucleotide reductase large subunit A ...   168  1e-41
BG404958 homologue to GP|27261142|gb ribonucleotide reductase la...   152  7e-37
CO979823                                                               32  1.5
TC229280 similar to UP|NK61_HUMAN (P78426) Homeobox protein Nkx-...    30  4.3
TC220853                                                               29  7.3
TC230950                                                               29  7.3
TC206433                                                               29  7.3

>TC210178 UP|Q8GZU8 (Q8GZU8) Ribonucleotide reductase large subunit B,
           complete
          Length = 2623

 Score = 1472 bits (3811), Expect = 0.0
 Identities = 711/812 (87%), Positives = 767/812 (93%)
 Frame = +3

Query: 1   MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
           MYVVKR+GRQE VHFDKITARLKKLSYGLS++HCD VLVAQKVCAGVYKGVTTSQLDELA
Sbjct: 33  MYVVKRNGRQETVHFDKITARLKKLSYGLSSDHCDAVLVAQKVCAGVYKGVTTSQLDELA 212

Query: 61  AETAAGMTANHPDYASLAARIAVSNLHKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDV 120
           AETAA MTANHPDYA LAARIAVSNLHKNT KSFSET+K+MY HFN RSG KAPLIADDV
Sbjct: 213 AETAAAMTANHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFNERSGLKAPLIADDV 392

Query: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHK 180
           YEII+KNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG V+ERPQHM+MRV+VGIHK
Sbjct: 393 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGQVLERPQHMLMRVAVGIHK 572

Query: 181 DDVESAVKTYHFMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
           DD++SAVKTYH MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMK+DSIEGIY+TLKECA+
Sbjct: 573 DDIDSAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 752

Query: 241 ISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
           ISKSAGGIGVS+H+IRA GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 753 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 932

Query: 301 LEPWHADIFEFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLA 360
           LEPWHAD+FEFL+L+ NHGKEE RARDLFYALWVPDLFMERVQSNG+WSLFCP+EAPGL 
Sbjct: 933 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLT 1112

Query: 361 DCWGEEYDKLYTQYEKAGKAKKIVQAQSLWFAILKSQIETGNPYMLFKDACNRKSNQQNL 420
           DCWGE++++LY QYE+ GKA K+VQAQSLWF ILKSQIETG PYMLFKD CNRKSNQQNL
Sbjct: 1113DCWGEKFEELYLQYEREGKAMKVVQAQSLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 1292

Query: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYF 480
           GTIKSSNLCTEIIEY+SPTETAVCNLASIALPRYVR+KG+P+ESH SKLVGS  S +RYF
Sbjct: 1293GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTCSGNRYF 1472

Query: 481 DFEKLGEVTAVVTTNLNKIIDVNYYPVETAERSNLRHRPIGIGVQGLADTFILLGMAFDS 540
           DF+KL E+TA+VTTNLNK+IDVNYYPVE A+RSNLRHRPIGIGVQGLADTFILLGMAFDS
Sbjct: 1473DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 1652

Query: 541 PEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSGSPVSKGILQPDMWGVTPSNLWDW 600
           PEAQQLNK+IFETIYYHALKTSC+LAAKEGPYETYSGSP+SKGILQPDMWGVTPSN WDW
Sbjct: 1653PEAQQLNKEIFETIYYHALKTSCDLAAKEGPYETYSGSPISKGILQPDMWGVTPSNRWDW 1832

Query: 601 GALREMISKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHL 660
            ALREMIS  G RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 1833DALREMISSNGARNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 2012

Query: 661 LHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPAELKVIYKTVWEIKQKILVDMAVDRGCY 720
           LHDLTEMGLW+P LKNKIIY++GSVQ + EIPAELK IYKTVWEIKQ+ LVDMA DRGCY
Sbjct: 2013LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPAELKNIYKTVWEIKQRTLVDMAADRGCY 2192

Query: 721 IDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASDAIKFTVDTSAIKDQP 780
           IDQSQSLNIHMD+PNFGKLTSL FYAWSKGLKTGMYYLR+RAA+DAIKFTVDTSA++++ 
Sbjct: 2193IDQSQSLNIHMDQPNFGKLTSLQFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSALREKS 2372

Query: 781 KVKEADDEDDDTKMAQMVCSLTNRDECEACGS 812
            V    ++DD+TKMAQMVCSLTNRDEC ACGS
Sbjct: 2373NV----EDDDNTKMAQMVCSLTNRDECLACGS 2456


>TC218465 UP|Q8GZU9 (Q8GZU9) Ribonucleotide reductase large subunit A,
           partial (97%)
          Length = 2679

 Score = 1451 bits (3757), Expect = 0.0
 Identities = 702/786 (89%), Positives = 749/786 (94%)
 Frame = +2

Query: 27  YGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELAAETAAGMTANHPDYASLAARIAVSNL 86
           YGLSTEHCDPVLV+QKVCAGVYKGVTTSQLDELAAETAA MTANHPDYASLAARIAVSNL
Sbjct: 2   YGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELAAETAAAMTANHPDYASLAARIAVSNL 181

Query: 87  HKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDVYEIIIKNAARLDSEIIYDRDFDYDYF 146
           HKNT KSFSET+KVMY HFN RS  KAPLIADDVYEIIIKNAARLDSEIIYDRDFDYDYF
Sbjct: 182 HKNTKKSFSETIKVMYYHFNERSAMKAPLIADDVYEIIIKNAARLDSEIIYDRDFDYDYF 361

Query: 147 GFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHKDDVESAVKTYHFMSQRWFTHASPTLF 206
           GFKTLERSYLLKVQG VVERPQHM+MRV+VGIHKDD++SAV+TYH MSQRWFTHASPTLF
Sbjct: 362 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAVRTYHMMSQRWFTHASPTLF 541

Query: 207 NAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAVISKSAGGIGVSVHNIRAHGSYIRGTN 266
           NAGTPRPQLSSCFLVCMK+DSIEGIYDTLKECAVISKSAGGIGVSVHNIRA GSYIRGTN
Sbjct: 542 NAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAVISKSAGGIGVSVHNIRATGSYIRGTN 721

Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLELKINHGKEEQRAR 326
           GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFL+L+ NHGKEE RAR
Sbjct: 722 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRAR 901

Query: 327 DLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLADCWGEEYDKLYTQYEKAGKAKKIVQA 386
           DLFYALWV DLFMERVQSNG+WSLFCPNEAPGLADCWGEE++KLYTQYE+ GKAKK+VQA
Sbjct: 902 DLFYALWVSDLFMERVQSNGQWSLFCPNEAPGLADCWGEEFEKLYTQYEREGKAKKVVQA 1081

Query: 387 QSLWFAILKSQIETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNL 446
           Q+LWF ILKSQIETG PYMLFKD CN+KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNL
Sbjct: 1082QNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNL 1261

Query: 447 ASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYFDFEKLGEVTAVVTTNLNKIIDVNYYP 506
           ASIALPRYVR+KG+P+ESH SKLVGSRGS +RYFDF+KLGEVTA+V TNLNKIIDVNYYP
Sbjct: 1262ASIALPRYVREKGVPMESHPSKLVGSRGSKNRYFDFDKLGEVTAIVATNLNKIIDVNYYP 1441

Query: 507 VETAERSNLRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIYYHALKTSCELA 566
           V+TA RSN+RHRPIGIGVQGLADTFILLG+AFDSPEAQQLNKDIFETIYYHALKTS ELA
Sbjct: 1442VDTARRSNMRHRPIGIGVQGLADTFILLGVAFDSPEAQQLNKDIFETIYYHALKTSSELA 1621

Query: 567 AKEGPYETYSGSPVSKGILQPDMWGVTPSNLWDWGALREMISKTGVRNSLLVAPMPTAST 626
           AKEGPYETYSGSP+SKGILQPDMWGV PS+ WDW ALREMI+KTGVRNSLLVAPMPTAST
Sbjct: 1622AKEGPYETYSGSPISKGILQPDMWGVMPSSRWDWDALREMIAKTGVRNSLLVAPMPTAST 1801

Query: 627 SQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQ 686
           SQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHLLHDLTEMGLW+P +KN IIY++GSVQ
Sbjct: 1802SQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPTIKNNIIYEDGSVQ 1981

Query: 687 NLSEIPAELKVIYKTVWEIKQKILVDMAVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYA 746
            + EIP +LK+IYKTVWEIKQK LVDMAVDRGCYIDQSQSLNIHMD+PNFGKLTSLHFYA
Sbjct: 1982KIPEIPDDLKIIYKTVWEIKQKTLVDMAVDRGCYIDQSQSLNIHMDQPNFGKLTSLHFYA 2161

Query: 747 WSKGLKTGMYYLRTRAASDAIKFTVDTSAIKDQPKVKEADDEDDDTKMAQMVCSLTNRDE 806
           WSKGLKTGMYYLR+RAA+DAIKFTVDTS + ++P    A++EDD+TKMAQMVCSLTNR+E
Sbjct: 2162WSKGLKTGMYYLRSRAAADAIKFTVDTSMLHEKPM---AEEEDDNTKMAQMVCSLTNREE 2332

Query: 807 CEACGS 812
           C ACGS
Sbjct: 2333CLACGS 2350


>TC234285 homologue to UP|Q8GZU8 (Q8GZU8) Ribonucleotide reductase large
           subunit B, partial (20%)
          Length = 631

 Score =  273 bits (699), Expect = 2e-73
 Identities = 134/167 (80%), Positives = 148/167 (88%)
 Frame = +1

Query: 646 RRVLSGEFVVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPAELKVIYKTVWEI 705
           RRVLSGEFVVVNKHLLHDLTEMGLW P LKNKIIY++GSVQ + E+PA LK IY+TVWEI
Sbjct: 1   RRVLSGEFVVVNKHLLHDLTEMGLWFPTLKNKIIYEDGSVQKIPEMPAVLKSIYQTVWEI 180

Query: 706 KQKILVDMAVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASD 765
           K + LVDMA DRGCYIDQSQSLNIHMD+PNFGKLTSLHFYAWSKGLKTGMYYLR+RAA+D
Sbjct: 181 KPRTLVDMAADRGCYIDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAAD 360

Query: 766 AIKFTVDTSAIKDQPKVKEADDEDDDTKMAQMVCSLTNRDECEACGS 812
           AIKFTVDT A K++  V    + DD+TKMAQMVCSLTNR+EC ACGS
Sbjct: 361 AIKFTVDTFAFKEKSNV----EYDDNTKMAQMVCSLTNREECLACGS 489


>BM890817 GP|27261142|g ribonucleotide reductase large subunit A {Glycine
           max}, partial (15%)
          Length = 414

 Score =  223 bits (567), Expect = 3e-58
 Identities = 106/120 (88%), Positives = 114/120 (94%)
 Frame = +2

Query: 389 LWFAILKSQIETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLAS 448
           LWF ILKSQIETG PYMLFKD CN+KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLAS
Sbjct: 53  LWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLAS 232

Query: 449 IALPRYVRDKGLPVESHQSKLVGSRGSSSRYFDFEKLGEVTAVVTTNLNKIIDVNYYPVE 508
           IALPRYVR+KG+P+ESH SKLVGSRGS +RYFDF+KLGEVTA+V TNLNKIIDVNYYPV+
Sbjct: 233 IALPRYVREKGVPMESHPSKLVGSRGSKNRYFDFDKLGEVTAIVATNLNKIIDVNYYPVD 412


>BI316104 GP|27261142|g ribonucleotide reductase large subunit A {Glycine
           max}, partial (16%)
          Length = 395

 Score =  168 bits (425), Expect = 1e-41
 Identities = 78/96 (81%), Positives = 88/96 (91%)
 Frame = +2

Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHLLHDLTEMGLWNPA 673
           NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHLLHDLTEMGLW+P 
Sbjct: 2   NSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPT 181

Query: 674 LKNKIIYDNGSVQNLSEIPAELKVIYKTVWEIKQKI 709
           +KN IIY++GSVQ + EIP +LK+IYKTVW++   I
Sbjct: 182 IKNNIIYEDGSVQKIPEIPDDLKIIYKTVWDVLSAI 289



 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 31/45 (68%), Positives = 39/45 (85%)
 Frame = +3

Query: 754 GMYYLRTRAASDAIKFTVDTSAIKDQPKVKEADDEDDDTKMAQMV 798
           GMYYLR+RAA+DAIKFTVDTS + ++P    A++EDD+TKMAQMV
Sbjct: 270 GMYYLRSRAAADAIKFTVDTSMLHEKPM---AEEEDDNTKMAQMV 395


>BG404958 homologue to GP|27261142|gb ribonucleotide reductase large subunit
           A {Glycine max}, partial (14%)
          Length = 424

 Score =  152 bits (383), Expect = 7e-37
 Identities = 81/126 (64%), Positives = 95/126 (75%)
 Frame = +3

Query: 458 KGLPVESHQSKLVGSRGSSSRYFDFEKLGEVTAVVTTNLNKIIDVNYYPVETAERSNLRH 517
           +G+ +ESH +KLVGSRGS +RYFDF+KL EVTA+VTTNLNKIIDVNYYPV+TA    L  
Sbjct: 63  EGVTMESHPTKLVGSRGSKNRYFDFDKLEEVTAMVTTNLNKIIDVNYYPVDTAFVELL-- 236

Query: 518 RPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSG 577
                 +Q   D      +     +AQQLNKDIF+TIYYHALKTS ELAAKEGPYET+SG
Sbjct: 237 ----FDLQFKLDVHQFDTLH*HEVQAQQLNKDIFQTIYYHALKTSSELAAKEGPYETFSG 404

Query: 578 SPVSKG 583
           SP+SKG
Sbjct: 405 SPISKG 422



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 17/30 (56%), Positives = 22/30 (72%)
 Frame = +1

Query: 443 VCNLASIALPRYVRDKGLPVESHQSKLVGS 472
           +CNLASIALP+YVR+K  P    Q  L+G+
Sbjct: 19  LCNLASIALPQYVREKV*PWNLIQLSLLGA 108


>CO979823 
          Length = 853

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = -3

Query: 571 PYETYSGSPVSKGILQPDMWGVTPSNLW--DWGALREMISKTGVRNSLLVAPMPTA-STS 627
           P + YS    S    QP++  +    LW   W AL  +I K G+R   L  P P+    S
Sbjct: 569 PRQQYSHGDWSGTDYQPNLT-LEGDKLWFKTWSALCAIILKRGLRICFLTVPKPSLYGGS 393

Query: 628 QILGN---NECFEPYTSNIYN 645
           Q LG+    +C +P  +  YN
Sbjct: 392 QCLGST*RQQCPKPLDNTSYN 330


>TC229280 similar to UP|NK61_HUMAN (P78426) Homeobox protein Nkx-6.1, partial
           (5%)
          Length = 463

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/82 (21%), Positives = 33/82 (39%)
 Frame = +2

Query: 217 SCFLVCMKEDSIEGIYDTLKECAVISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPML 276
           S FL+ M+ D+     +     A     +GG+  + HN+    S + G    +  +    
Sbjct: 83  SPFLIRMENDTAAAANNNTTATAAAKAGSGGVKSNNHNLEEEHSNLNGEEQMAEQVEAEE 262

Query: 277 RVFNDTARYVDQGGGKRKGAFA 298
               +  R  D+G G+  G+ A
Sbjct: 263 EEEEEEDRQADEGEGEETGSAA 328


>TC220853 
          Length = 775

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 171 IMRVSVGIHKDDVESAVKTYHFMSQRWFT 199
           +  V VG H +D+E  +  YH  + RW++
Sbjct: 279 LQEVLVGKHDEDIEETLYKYHIPTDRWWS 365


>TC230950 
          Length = 1449

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 22/101 (21%), Positives = 42/101 (40%), Gaps = 7/101 (6%)
 Frame = +3

Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW-----HADIFEFLELKINHGKEEQRA-- 325
           +P+LRV  DT R+ ++ GGK +  F +  +         DI ++L  +   G+       
Sbjct: 438 IPVLRVL*DTERWSEKTGGKEQFPFIIDQKSGIFIYESGDIVKYLFERYGEGRSPSSGLL 617

Query: 326 RDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLADCWGEE 366
               +  W+P + +   +    W    P+  PG  + +  E
Sbjct: 618 ESTIFTGWMPTI-LRAGRGMTRWEHSRPDPPPGKLELFSYE 737


>TC206433 
          Length = 1287

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +2

Query: 52  TTSQLDELAAETAAGMTANHPDYASLAARIA-VSNLHKNTLKSFSETVKV-MYNHFNHRS 109
           T  Q +  AAE A    +N     SLAARI   + ++KN L+  ++ V   +  +F  RS
Sbjct: 26  TLRQAEHSAAEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRS 205

Query: 110 G 110
           G
Sbjct: 206 G 208


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,600,341
Number of Sequences: 63676
Number of extensions: 459443
Number of successful extensions: 2116
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of query: 812
length of database: 12,639,632
effective HSP length: 105
effective length of query: 707
effective length of database: 5,953,652
effective search space: 4209231964
effective search space used: 4209231964
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)


Medicago: description of AC135232.5