BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135230.4 - phase: 0
(360 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219537 similar to UP|Q8LCU7 (Q8LCU7) Nuclear receptor binding ... 419 e-117
TC220355 similar to UP|Q8LCU7 (Q8LCU7) Nuclear receptor binding ... 80 1e-15
TC226359 similar to UP|O23939 (O23939) Ripening-induced protein ... 75 4e-14
TC204950 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partia... 74 1e-13
TC206726 similar to UP|O23939 (O23939) Ripening-induced protein ... 67 1e-11
TC226692 similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR... 55 4e-08
TC205898 similar to UP|Q9SXZ7 (Q9SXZ7) NADPH oxidoreductase homo... 53 2e-07
TC223408 similar to UP|Q43677 (Q43677) Auxin-induced protein, pa... 49 3e-06
TC216115 weakly similar to UP|ADHX_UROHA (P80467) Alcohol dehydr... 47 1e-05
TC205897 similar to UP|Q9SXZ7 (Q9SXZ7) NADPH oxidoreductase homo... 47 1e-05
BM309584 38 0.006
BQ611272 homologue to GP|1498024|gb| glutathione-dependent forma... 37 0.014
BI468870 similar to GP|7705214|gb|A alcohol dehydrogenase ADH {L... 36 0.031
TC205148 similar to GB|AAB06322.1|1498024|ATU63931 glutathione-d... 34 0.090
BQ786473 34 0.12
TC223173 similar to UP|Q9FH04 (Q9FH04) Alcohol dehydrogenase, pa... 34 0.12
TC214936 UP|O82478 (O82478) Alcohol dehydrogenase Adh-1 (Fragme... 32 0.58
TC206847 similar to GB|AAF76441.1|8569096|F2J10 ESTs gb|AI994059... 32 0.58
TC214932 homologue to UP|Q8LJR2 (Q8LJR2) Alcohol dehydrogenase 1... 31 0.76
TC223017 similar to PIR|T49047|T49047 quinone reductase-like pro... 31 1.00
>TC219537 similar to UP|Q8LCU7 (Q8LCU7) Nuclear receptor binding factor-like
protein, partial (65%)
Length = 947
Score = 419 bits (1077), Expect = e-117
Identities = 211/242 (87%), Positives = 221/242 (91%), Gaps = 10/242 (4%)
Frame = +2
Query: 129 PPSFGTWQTYIVKDQNVWHKVNKGVPMEYAATITVNPLTALLMLEDCVTLNSGDAIVQNG 188
PPSFGTWQTYIV D+ VWHK+ KGVPMEYAATITVNPLTALLMLE CVTLNSGDAIVQNG
Sbjct: 2 PPSFGTWQTYIVNDEKVWHKIEKGVPMEYAATITVNPLTALLMLEHCVTLNSGDAIVQNG 181
Query: 189 ATSMVGQCVIQLAKSRGIHNINIIRDRPGVGEVKERLKDLGADEVFTESELEVKNVKSLL 248
ATSMVGQCVIQ+AKSRGIHNINIIRDRPGV EVKERLK+LGADEVFTESELEVKNVKSLL
Sbjct: 182 ATSMVGQCVIQIAKSRGIHNINIIRDRPGVDEVKERLKNLGADEVFTESELEVKNVKSLL 361
Query: 249 GGIPEPALGFNCVGGNSASLVLKFLRRGGTMVTYGGMSKKPVTVSTSSFIFKN------- 301
GGIPEP LGFNCVGGN+ASLVLKFLR+GGTMVTYGGMSKKPV+VSTSSFIFK+
Sbjct: 362 GGIPEPVLGFNCVGGNAASLVLKFLRQGGTMVTYGGMSKKPVSVSTSSFIFKDISLRGFW 541
Query: 302 ---WLSTDKAEEGRRMIDRLLGLVQDGKLKYKMELTPFNDFNTALDKALGKLGSQPKQVI 358
WLSTDKAEE R MIDRLL LVQ+GKLKYKM+L PF DFNTALDKALGKLGSQPKQVI
Sbjct: 542 LQKWLSTDKAEESRGMIDRLLSLVQEGKLKYKMDLAPFEDFNTALDKALGKLGSQPKQVI 721
Query: 359 KF 360
KF
Sbjct: 722 KF 727
>TC220355 similar to UP|Q8LCU7 (Q8LCU7) Nuclear receptor binding factor-like
protein, partial (10%)
Length = 283
Score = 80.1 bits (196), Expect = 1e-15
Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Frame = +3
Query: 1 MLRSLSHKPSPSSLFNFTSL-----RSRILNTHTHAFSSAVSPPSKAIIYESHGQPDAVT 55
MLR L +P FNF S R + L T + S+AVSPPSKAI+YE+HG+PD VT
Sbjct: 51 MLRHLGVH-APRLAFNFKSSLIHGGRGKTLTTRAFSSSAAVSPPSKAIVYEAHGEPDTVT 227
Query: 56 KLVDIPATEVKENDLCVK 73
KLV++PA EVKE D+CVK
Sbjct: 228 KLVEVPAVEVKEKDVCVK 281
>TC226359 similar to UP|O23939 (O23939) Ripening-induced protein (Fragment),
partial (93%)
Length = 1355
Score = 75.5 bits (184), Expect = 4e-14
Identities = 91/328 (27%), Positives = 147/328 (44%), Gaps = 12/328 (3%)
Frame = +3
Query: 13 SLFNFTSLRSRILNTHTHAFSSAVSPPS--KAIIYESHGQPDAVTKL-VDIPATEVKEND 69
S F+FT L R ++T T + + A+S PS KA Y +G+ V K + EVKE+
Sbjct: 75 SPFSFT-LEPRFISTSTRSMA-AISIPSHMKAWTYSEYGKSKEVLKFNQSVALPEVKEDQ 248
Query: 70 LCVKMLAAPINPSDINRIQGVYPVRPEP-PAVGGYEGVGEVHSVGSAVTCFSPGDWV--- 125
+ +K+ AA +NP D R++G + P P GY+ G V VGS V F GD V
Sbjct: 249 VLIKVAAASLNPIDHKRMEGYFKNSDSPLPTAPGYDVAGVVVKVGSEVKKFKVGDEVYGD 428
Query: 126 -----IPSPPSFGTWQTYIVKDQNVWHKVNKGVPMEYAATITVNPLTALLMLEDCVTLNS 180
+ P G+ Y ++ + + + AA++ + TA LE ++
Sbjct: 429 INVKALEYPKVIGSLAEYTAAEERLLAHKPQNLSFAEAASLPLTLETAYEGLER-TGFSA 605
Query: 181 GDAIVQNGATSMVGQCVIQLAKSRGIHNINIIRDRPGVGEVKERLKDLGADEVFTESELE 240
G +I+ G VG VIQLAK ++ + + ++ E L++LGAD ++
Sbjct: 606 GKSILVLGGAGGVGTHVIQLAKH--VYGASKVAATASTRKL-ELLRNLGADWPIDYTKEN 776
Query: 241 VKNVKSLLGGIPEPALGFNCVGGNSASLVLKFLRRGGTMVTYGGMSKKPVTVSTSSFIFK 300
+++ + ++ VG K L+ GG +VT P + FI
Sbjct: 777 FEDLSEKFDVV------YDTVG--QTEQAFKVLKEGGKVVTIVPPGFHPAIL----FI-- 914
Query: 301 NWLSTDKAEEGRRMIDRLLGLVQDGKLK 328
LSTD A ++++L + GKLK
Sbjct: 915 --LSTDGA-----ILEKLNPYFESGKLK 977
>TC204950 similar to UP|Q945P3 (Q945P3) At1g23740/F5O8_27, partial (80%)
Length = 1560
Score = 73.6 bits (179), Expect = 1e-13
Identities = 71/264 (26%), Positives = 115/264 (42%), Gaps = 10/264 (3%)
Frame = +1
Query: 36 VSPPSKAIIYESHGQPDAVTKLVDIPATEVKENDLCVKMLAAPINPSDINRIQGVYPVRP 95
VS KA +Y +G D + ++ +VKE+ + +K++AA +NP D R QG +
Sbjct: 271 VSSEMKAWVYGEYGGVDVLKLDSNVTVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATD 450
Query: 96 EP-PAVGGYEGVGEVHSVGSAVTCFSPGDWV--------IPSPPSFGTWQTYIVKDQNVW 146
P P V GY+ G V VGS V F GD V + P FG+ Y ++ +
Sbjct: 451 SPLPTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLL 630
Query: 147 HKVNKGVPMEYAATITVNPLTALLMLEDCVTLNSGDAIVQNGATSMVGQCVIQLAKSRGI 206
K + AA++ + TA LE + G +I+ + VG VIQLAK +
Sbjct: 631 APKPKNLDFAQAASLPLAIETAYEGLER-TGFSPGKSILVLNGSGGVGSLVIQLAKQ--V 801
Query: 207 HNINIIRDRPGVGEVKERLKDLGADEVFTESELEVKNVKSLLGGIPEP-ALGFNCVGGNS 265
+ + + + + LK LGAD L + K +PE + ++ +G
Sbjct: 802 YGASRVAATSSTRNL-DLLKSLGAD-------LAIDYTKENFEDLPEKFDVVYDAIG--Q 951
Query: 266 ASLVLKFLRRGGTMVTYGGMSKKP 289
+K ++ G++V G P
Sbjct: 952 CDRAVKAVKEDGSVVALTGAVTPP 1023
>TC206726 similar to UP|O23939 (O23939) Ripening-induced protein (Fragment),
partial (84%)
Length = 1627
Score = 67.4 bits (163), Expect = 1e-11
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 17/294 (5%)
Frame = +3
Query: 5 LSHKPSPSSL----FNFTSLRSRILNTHTHAFSSAVSPPSKAIIYESHGQPDAVTKLVD- 59
+ H +P SL F + + + I+ THT KA Y HG P V KL
Sbjct: 21 VEHIITPVSLLILSFKYMAEDASIIPTHT-----------KAWYYSEHGSPGDVLKLDPN 167
Query: 60 --IPATEVKENDLCVKMLAAPINPSDINRIQGVYP-VRPEPPAVGGYEGVGEVHSVGSAV 116
+P ++K++ + +K++AA INP D R+ G + P P V GY+ G V VG V
Sbjct: 168 WPLPQ-QLKDDQVLIKVIAASINPVDYKRMHGEFKDTDPHLPIVPGYDVAGIVVKVGGEV 344
Query: 117 TCFSPGDWV--------IPSPPSFGTWQTYIVKDQNVWHKVNKGVPMEYAATITVNPLTA 168
F GD V + + GT Y + ++ + + AA+I + TA
Sbjct: 345 KKFKVGDEVYGDINEQGLSNLKIHGTLSEYTIAEERLLAHKPSNLSFIEAASIPLALETA 524
Query: 169 LLMLEDCVTLNSGDAIVQNGATSMVGQCVIQLAKSRGIHNINIIRDRPGVGEVKERLKDL 228
E ++G +I+ G VG VIQLAK ++ + I G++ E L++L
Sbjct: 525 NEGFEHA-HFSAGKSILVLGGAGGVGNYVIQLAKQ--VYKASKIAATASTGKL-ELLREL 692
Query: 229 GADEVFTESELEVKNVKSLLGGIPEP-ALGFNCVGGNSASLVLKFLRRGGTMVT 281
G D L + K +PE L ++ VG K ++ G +VT
Sbjct: 693 GVD-------LPIDYTKENFEDLPEKYDLVYDVVG--QGDRAFKAVKEDGKVVT 827
>TC226692 similar to UP|Q9AYU1 (Q9AYU1) Quinone-oxidoreductase QR1
(Fragment), partial (90%)
Length = 1229
Score = 55.5 bits (132), Expect = 4e-08
Identities = 78/303 (25%), Positives = 123/303 (39%), Gaps = 15/303 (4%)
Frame = +1
Query: 41 KAIIYESHGQPDAVTKLVDIPATEVKENDLCVKMLAAPINPSDINRIQGVYPVRPEP--- 97
+A+ Y+++G A K V++ K N++ +K+ A INP D +G+ P
Sbjct: 52 QAVRYDAYGGGPAGLKHVEVAVPSPKANEVLIKLEAVSINPIDWKIQKGLLRPLFLPRTF 231
Query: 98 PAVGGYEGVGEVHSVGSAVTCFSPGDWVIP--SPPSFGTWQTYIVKDQNVWHKVNKGVPM 155
P + + GE+ +G+ V F GD V+ + G + + V +++ V
Sbjct: 232 PHIPCTDVAGEIVEIGTQVKDFKVGDQVLAKLTHQYGGGFAEFAVASESLTAARPSEVSA 411
Query: 156 EYAATITVNPLTALLMLEDCVTLNSG---------DAIVQNGATSMVGQCVIQLAKSRGI 206
AA + + LTA D +T +G I+ A+ VG +QLAK
Sbjct: 412 AEAAALPIAGLTA----RDALTQIAGVKLDGTGQLKNILVTAASGGVGHYAVQLAKLGNT 579
Query: 207 HNINIIRDRPGVGEVKERLKDLGADEVFTESELEVKNVKSLLGGIPEPALGFNCVGGNSA 266
H + G + + +K LGADEV E +KS G + + NC G S
Sbjct: 580 H----VTATCGARNI-DFVKGLGADEVLDYRTPEGAALKSPSGRKYDAVI--NCTTGISW 738
Query: 267 SLVLKFLRRGGTMVTYGGMSKKPVTVSTSSFIF-KNWLSTDKAEEGRRMIDRLLGLVQDG 325
S L +V + T + F K L R ++ LL LV+DG
Sbjct: 739 STFDPNLTEKAVVVDLTPNASSLWTAAMKKITFSKKQLVPFFVNVQREGLEYLLQLVKDG 918
Query: 326 KLK 328
KLK
Sbjct: 919 KLK 927
>TC205898 similar to UP|Q9SXZ7 (Q9SXZ7) NADPH oxidoreductase homolog
(Fragment), partial (53%)
Length = 822
Score = 53.1 bits (126), Expect = 2e-07
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Frame = +1
Query: 65 VKENDLCVKMLAAPINPSDINRIQGVY------PVRPEPPAVGGYEGVGEVHSVGSAVTC 118
VK + VK++ A +N SD+N G Y V P G+E VG + +VG +VT
Sbjct: 130 VKPKHVLVKIIFAGVNASDVNFSSGRYFGGNNNDVVSRLPFDAGFEAVGIIAAVGDSVTD 309
Query: 119 FSPGDWVIPSP-PSFGTWQTYIVKDQNVWHKVNKGVPMEYAATITVNPLTALLMLEDCVT 177
G +P +FG + +++ H + P + + LTA + LE
Sbjct: 310 LKVG---MPCAFMTFGGYAEFLMIPSK--HALPVPRPDPEVVAMLTSGLTASIALEKAGQ 474
Query: 178 LNSGDAIVQNGATSMVGQCVIQLAK---SRGIHNINIIRDRPGVGEVKERLKDLGADEVF 234
+ SG ++ A GQ +QLAK S G+ G G + LKDLG V
Sbjct: 475 MESGKVVLVTAAAGGTGQFAVQLAKIP*STGVATC-------GGGAKPKLLKDLGVHIVI 633
Query: 235 TESELEVK 242
+ +VK
Sbjct: 634 DDHSDDVK 657
>TC223408 similar to UP|Q43677 (Q43677) Auxin-induced protein, partial (54%)
Length = 543
Score = 49.3 bits (116), Expect = 3e-06
Identities = 48/166 (28%), Positives = 71/166 (41%), Gaps = 10/166 (6%)
Frame = +1
Query: 76 AAPINPSDINRIQGVYPVRPEP-PAVGGYEGVGEVHSVGSAVTCFSPGDWVIP------- 127
A +NP+D R G + P P V G++ G V VGS V+ F GD V
Sbjct: 4 ARGLNPADYMRALGFFKDTDAPLPIVPGFDAAGVVVRVGSKVSKFKVGDEVYGDIIEYAW 183
Query: 128 -SPPSFGTWQTYIVKDQNVWHKVNKGVPMEYAATITVNPLTALLMLEDCVTLNSGDAIVQ 186
+P + GT Y ++ V + AA++ +TA D + ++G +I+
Sbjct: 184 NNPKTIGTLAEYTATEEKVLAHKPSNLSFIEAASLPAAIITAYQGF-DKIEFSAGKSILV 360
Query: 187 NGATSMVGQCVIQLAKS-RGIHNINIIRDRPGVGEVKERLKDLGAD 231
G VG VIQLAK G + P ++ L+ LGAD
Sbjct: 361 LGGAGGVGSLVIQLAKHVFGASKVAATASTP----KQDLLRSLGAD 486
>TC216115 weakly similar to UP|ADHX_UROHA (P80467) Alcohol dehydrogenase
class III (Glutathione-dependent formaldehyde
dehydrogenase) (FDH) , partial (42%)
Length = 1433
Score = 47.4 bits (111), Expect = 1e-05
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +1
Query: 41 KAIIYESHGQPDAVTKL-VDIP-ATEVKENDLCVKMLAAPINPSDINRIQGVYPVRPEPP 98
KA I G+P V ++ VD P ATEV+ VKML A I +DI+ +G +P P
Sbjct: 91 KAAICWGIGKPVTVEEIQVDPPKATEVR-----VKMLCASICSTDISSTKG-FPHTNFPI 252
Query: 99 AVGGYEGVGEVHSVGSAVTCFSPGDWVIPS 128
A+G +EGVG + SVG VT GD VIP+
Sbjct: 253 ALG-HEGVGIIESVGDQVTNLKEGDVVIPT 339
>TC205897 similar to UP|Q9SXZ7 (Q9SXZ7) NADPH oxidoreductase homolog
(Fragment), partial (44%)
Length = 1107
Score = 47.0 bits (110), Expect = 1e-05
Identities = 49/182 (26%), Positives = 76/182 (40%), Gaps = 15/182 (8%)
Frame = +3
Query: 178 LNSGDAIVQNGATSMVGQCVIQLAKSRGIHNINIIRDRPGVGEVKERLKDLGADEVFTES 237
+ SG ++ A GQ +QLAK G N + G G + LKDLG + V
Sbjct: 162 MESGKVVLVTAAAGGTGQFAVQLAKLAG----NTVVATCGGGAKAKLLKDLGVNRVIDYH 329
Query: 238 ELEVKNVKSLLGGIPEPA-LGFNCVGGNSASLVLKFLRRGGTMVTYGGMSK----KPVTV 292
+VK V L P+ + + VGG+ +L L L G ++ G +S+ K T
Sbjct: 330 SEDVKTV--LREEFPKGIDIIYESVGGDMLNLCLNALAVHGRLIVIGMISQYQGEKGWTP 503
Query: 293 STSSFIFKNWLSTDKAEEG----------RRMIDRLLGLVQDGKLKYKMELTPFNDFNTA 342
S + + L+ + G + +DRL L GKLK ++ F ++A
Sbjct: 504 SKYPGLLEKLLAKSQTVSGFFLVQYGHLWQEHLDRLFNLYSSGKLKVAIDPKKFIGLHSA 683
Query: 343 LD 344
D
Sbjct: 684 AD 689
>BM309584
Length = 406
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/87 (28%), Positives = 44/87 (49%)
Frame = +3
Query: 41 KAIIYESHGQPDAVTKLVDIPATEVKENDLCVKMLAAPINPSDINRIQGVYPVRPEPPAV 100
KA + G+P V ++ P ++ ++ +K+L I +D++ +GV + P +
Sbjct: 147 KAAVAYGPGEPFVVENILVHPPQKM---EVRIKILYTSICHTDLSAWRGVSEAQRAYPRI 317
Query: 101 GGYEGVGEVHSVGSAVTCFSPGDWVIP 127
G+E G V SVG V+ GD V+P
Sbjct: 318 LGHEASGIVESVGEGVSEVKEGDIVVP 398
>BQ611272 homologue to GP|1498024|gb| glutathione-dependent formaldehyde
dehydrogenase {Arabidopsis thaliana}, partial (29%)
Length = 456
Score = 37.0 bits (84), Expect = 0.014
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +2
Query: 30 HAFSSA-----VSPPSKAIIYESHGQPDAVTKLVDIPATEVKENDLCVKMLAAPINPSDI 84
H+FS A V+ A+ +E P+ + D+ + ++ +++L + +D
Sbjct: 101 HSFSMATTQGQVTTCKAAVAWE----PNKPLSIEDVQVAPPQNGEVRIQILYTALCHTDA 268
Query: 85 NRIQGVYPVRPEPPAVGGYEGVGEVHSVGSAVTCFSPGDWVIP 127
G P P + G+E G V SVG VT PGD VIP
Sbjct: 269 YTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTAVQPGDHVIP 394
>BI468870 similar to GP|7705214|gb|A alcohol dehydrogenase ADH {Lycopersicon
esculentum}, partial (19%)
Length = 416
Score = 35.8 bits (81), Expect = 0.031
Identities = 24/89 (26%), Positives = 41/89 (45%), Gaps = 2/89 (2%)
Frame = +1
Query: 41 KAIIYESHGQPDAVTKLVDIPAT--EVKENDLCVKMLAAPINPSDINRIQGVYPVRPEPP 98
KA I G+P + +++ P E + +C + I+ ++ +YP
Sbjct: 157 KAAICRKAGEPLCIEEIIVAPPMPGEARIRIICSSLCQTDISFRNMQDHPAIYP------ 318
Query: 99 AVGGYEGVGEVHSVGSAVTCFSPGDWVIP 127
+ G+E +G V SVG VT + GD V+P
Sbjct: 319 RILGHEAIGVVESVGEDVTEVTKGDVVVP 405
>TC205148 similar to GB|AAB06322.1|1498024|ATU63931 glutathione-dependent
formaldehyde dehydrogenase {Arabidopsis thaliana;} ,
partial (48%)
Length = 678
Score = 34.3 bits (77), Expect = 0.090
Identities = 16/30 (53%), Positives = 18/30 (59%)
Frame = +1
Query: 98 PAVGGYEGVGEVHSVGSAVTCFSPGDWVIP 127
P + G+E G V SVG VT PGD VIP
Sbjct: 256 PCILGHEAAGIVESVGEGVTNVQPGDHVIP 345
>BQ786473
Length = 394
Score = 33.9 bits (76), Expect = 0.12
Identities = 21/48 (43%), Positives = 29/48 (59%)
Frame = +1
Query: 81 PSDINRIQGVYPVRPEPPAVGGYEGVGEVHSVGSAVTCFSPGDWVIPS 128
P +I+ +G +P P A+G +EGVG + SVG VT GD VIP+
Sbjct: 199 PQNISSTKG-FPHTNFPIALG-HEGVGIIESVGDQVTNLKEGDVVIPT 336
>TC223173 similar to UP|Q9FH04 (Q9FH04) Alcohol dehydrogenase, partial (31%)
Length = 470
Score = 33.9 bits (76), Expect = 0.12
Identities = 24/87 (27%), Positives = 42/87 (47%)
Frame = +1
Query: 41 KAIIYESHGQPDAVTKLVDIPATEVKENDLCVKMLAAPINPSDINRIQGVYPVRPEPPAV 100
KA + G+P + ++ P K + ++++ + + SDI ++ + P +
Sbjct: 76 KAAVSRRAGEPLVIEDIIVAPP---KPREARIRIICSSLCHSDIT-LRNLQDPPAIFPRI 243
Query: 101 GGYEGVGEVHSVGSAVTCFSPGDWVIP 127
G+E G V SVG VT + GD VIP
Sbjct: 244 LGHEATGVVESVGKDVTEVTKGDVVIP 324
>TC214936 UP|O82478 (O82478) Alcohol dehydrogenase Adh-1 (Fragment) ,
complete
Length = 1353
Score = 31.6 bits (70), Expect = 0.58
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 98 PAVGGYEGVGEVHSVGSAVTCFSPGDWVIP 127
P + G+E G V SVG VT PGD +P
Sbjct: 222 PRIFGHEASGIVESVGEGVTHLKPGDHALP 311
>TC206847 similar to GB|AAF76441.1|8569096|F2J10 ESTs gb|AI994059, gb|T43740
come from this gene. {Arabidopsis thaliana;} , partial
(46%)
Length = 1571
Score = 31.6 bits (70), Expect = 0.58
Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 17/179 (9%)
Frame = +2
Query: 6 SHKPSPSSLFNFTSLRSRILNTHTH-AFSSAVSPPS--KAIIYESHGQPDAVTKLVDIPA 62
SH P+PS T++ S T TH ++ + S PS A+ S A + A
Sbjct: 374 SHAPAPS-----TTVGSPFPRTPTHPSYFT*QSEPSLTHALYSGSTANRSAARRFSK*KA 538
Query: 63 TEVKENDLC----------VKMLAAPINPSDINRIQGVYPVRPEPPAVGGYEGVGEVHSV 112
T L + + P P + + P PA V S
Sbjct: 539 TSSNRFSLASSASGTRTRLTSLRSTPTTPPSVKDGPSPFTTCPALPAAAASMATPFVPSP 718
Query: 113 GSA-VTCFSPGDWVIPSPPSFGTWQTYIVKDQNVWHKVNKGVPMEYAATI---TVNPLT 167
GS V+ +PG W+I P GTW+ + W + N + Y + T +P+T
Sbjct: 719 GSQRVSRSNPGAWLIIRPDGDGTWKPW--GRLQAWREPNNSNAVGYRFEVLPGTADPVT 889
>TC214932 homologue to UP|Q8LJR2 (Q8LJR2) Alcohol dehydrogenase 1 (Fragment),
complete
Length = 1456
Score = 31.2 bits (69), Expect = 0.76
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 98 PAVGGYEGVGEVHSVGSAVTCFSPGDWVIP 127
P + G+E G V SVG VT PGD +P
Sbjct: 282 PRILGHEASGIVESVGKGVTHLKPGDHALP 371
>TC223017 similar to PIR|T49047|T49047 quinone reductase-like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(57%)
Length = 780
Score = 30.8 bits (68), Expect = 1.00
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 3/128 (2%)
Frame = +1
Query: 178 LNSGDAIVQNGATSMVGQCVIQLAKSRGIHNINIIRDRPGVGEVKERLKDLGADEVFT-E 236
L+SG VG +Q+ K+ G I + R E + LK LG D V
Sbjct: 10 LSSGQVXXXWXXAGGVGLAAVQIGKACGAIVIAVARG----AEKVQLLKSLGVDHVVDLG 177
Query: 237 SELEVKNVKSLLGGIPEPALG--FNCVGGNSASLVLKFLRRGGTMVTYGGMSKKPVTVST 294
+E +++K L + ++ VGG L+ L+ G ++ G S + +
Sbjct: 178 NENVTQSIKQFLQARKLKGIDVLYDPVGGKLTKESLRLLKWGAHILIIGFASGEIPLIPA 357
Query: 295 SSFIFKNW 302
+ + KNW
Sbjct: 358 NIALVKNW 381
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,915,530
Number of Sequences: 63676
Number of extensions: 237453
Number of successful extensions: 1126
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of query: 360
length of database: 12,639,632
effective HSP length: 98
effective length of query: 262
effective length of database: 6,399,384
effective search space: 1676638608
effective search space used: 1676638608
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC135230.4