Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135230.10 - phase: 0 
         (548 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC209201 similar to UP|Q8H0S2 (Q8H0S2) At4g23490/F16G20_190, par...   328  e-112
TC218542                                                              392  e-109
BG511072 similar to GP|15529153|gb AT4g23490/F16G20_190 {Arabido...   185  1e-53
TC222942 similar to UP|O23042 (O23042) YUP8H12.11 protein, parti...   188  6e-48
BM893174 similar to GP|15529153|gb AT4g23490/F16G20_190 {Arabido...   184  9e-47
AI930731                                                              172  5e-43
TC220379 weakly similar to GB|AAQ56819.1|34098873|BT010376 At3g1...   137  1e-32
TC211513                                                              119  3e-27
CA783416                                                               72  6e-13
BE348107                                                               61  1e-09
BU547693                                                               50  3e-06
TC229280 similar to UP|NK61_HUMAN (P78426) Homeobox protein Nkx-...    41  0.002
BQ253805                                                               37  0.023
CD416464                                                               36  0.039
TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1...    35  0.086
CA800081                                                               35  0.086
TC222177 similar to UP|Q9SEE9 (Q9SEE9) Arginine/serine-rich prot...    33  0.33
TC227400 similar to UP|Q6R0G3 (Q6R0G3) MYB transcription factor,...    32  0.73
TC222389 similar to UP|Q8FZX5 (Q8FZX5) Iron compound ABC transpo...    32  0.95
TC213837                                                               32  0.95

>TC209201 similar to UP|Q8H0S2 (Q8H0S2) At4g23490/F16G20_190, partial (53%)
          Length = 993

 Score =  328 bits (842), Expect(2) = e-112
 Identities = 149/226 (65%), Positives = 181/226 (79%)
 Frame = +1

Query: 285 LAVELATMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEAGFHQYDVYGDLLGLLGAHP 344
           LA  L  MQDRCIQRYP LYGSDDRMQACMAELGVPLTKE GFHQYDVYG+L GLL +HP
Sbjct: 166 LAKALQKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKETGFHQYDVYGNLFGLLASHP 345

Query: 345 VAPLVSLHHLDVVQPIFPSMSRAQSIRHLMESINQDSSGIMQQSICYDKNRFWSISVSWG 404
           V PLVSLHHLDVV+PIFP+++R ++++ L   +  DS+G+MQQSICYDK++ W++SVSWG
Sbjct: 346 VTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKFDSAGLMQQSICYDKSKSWTVSVSWG 525

Query: 405 FMVQILRGVLSPRELEMPSRTFLNWYRRADYTAYAFNTRPVAKHPCQKPFVYYMSKTHFD 464
           F VQI RGV SPRE+EMPSRTFLNWYRRADYTAYAFNTRPV+++PCQKPFV+Y SK  ++
Sbjct: 526 FAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYN 705

Query: 465 TASRQIVGVYSRDQTKSPFCRWRMESPEKITSIVVTKRRDPLRWKK 510
           +  +QIV  Y R +   P CRW+M +P     + V K+ DP  W +
Sbjct: 706 STMQQIVSEYERHRVPHPDCRWKMANPAAFDKVEVYKKPDPHLWDR 843



 Score = 97.1 bits (240), Expect(2) = e-112
 Identities = 42/55 (76%), Positives = 48/55 (86%)
 Frame = +3

Query: 230 DDDTVFVVDNVVRILSKYDHRHFYYVGSSSESHVQNIHFSYAMAYGGGGFAISYP 284
           DDDTVFV +N++R+L KYDH  FYY+GS SESH+QNI FSY MAYGGGGFAISYP
Sbjct: 3   DDDTVFVTENLIRVLRKYDHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYP 167


>TC218542 
          Length = 1167

 Score =  392 bits (1006), Expect = e-109
 Identities = 180/266 (67%), Positives = 213/266 (79%)
 Frame = +1

Query: 245 SKYDHRHFYYVGSSSESHVQNIHFSYAMAYGGGGFAISYPLAVELATMQDRCIQRYPALY 304
           +KYDH + YY+GS SESH+QNI FSY MAYGGGGFAISYPLA  L+ MQDRCIQRYPALY
Sbjct: 7   NKYDHNYMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPALY 186

Query: 305 GSDDRMQACMAELGVPLTKEAGFHQYDVYGDLLGLLGAHPVAPLVSLHHLDVVQPIFPSM 364
           GSDDRMQACMAELGVPLTKE GFHQYDVYG+L GLL AHPV PLVSLHHLDVV+PIFP+ 
Sbjct: 187 GSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNA 366

Query: 365 SRAQSIRHLMESINQDSSGIMQQSICYDKNRFWSISVSWGFMVQILRGVLSPRELEMPSR 424
           +R ++I+ L   +  DS+ ++QQSIC+D+NR W+ISVSWGF VQI RG+ + RE+EMPSR
Sbjct: 367 TRVEAIKRLTIPMKLDSASLIQQSICHDRNRRWTISVSWGFAVQIFRGIFTQREMEMPSR 546

Query: 425 TFLNWYRRADYTAYAFNTRPVAKHPCQKPFVYYMSKTHFDTASRQIVGVYSRDQTKSPFC 484
           TFLNWYRRADYTAYAFNTRP +++PCQKPFV+Y SK   ++  +Q V  Y RD   SP C
Sbjct: 547 TFLNWYRRADYTAYAFNTRPFSRNPCQKPFVFYFSKAKLNSTLQQTVTDYERDPIPSPEC 726

Query: 485 RWRMESPEKITSIVVTKRRDPLRWKK 510
           RW M  P  +  I V K++DP  W +
Sbjct: 727 RWNMADPSALDKIEVHKKKDPHLWDR 804


>BG511072 similar to GP|15529153|gb AT4g23490/F16G20_190 {Arabidopsis
           thaliana}, partial (26%)
          Length = 425

 Score =  185 bits (470), Expect(2) = 1e-53
 Identities = 83/119 (69%), Positives = 100/119 (83%)
 Frame = +1

Query: 337 LGLLGAHPVAPLVSLHHLDVVQPIFPSMSRAQSIRHLMESINQDSSGIMQQSICYDKNRF 396
           LGLL AHPV PLVSLHHLDVV+PIFP++SR Q+++ L   +  D +G++QQSICYDK R 
Sbjct: 67  LGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVQALKRLKGPMKLDPAGLIQQSICYDKART 246

Query: 397 WSISVSWGFMVQILRGVLSPRELEMPSRTFLNWYRRADYTAYAFNTRPVAKHPCQKPFV 455
           W+ISVSWG+ VQI RG  S RE+EMP+RTFLNWY+RADYTAY FNTRPV++H CQKPFV
Sbjct: 247 WTISVSWGYAVQIFRGTFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFV 423



 Score = 43.1 bits (100), Expect(2) = 1e-53
 Identities = 18/21 (85%), Positives = 20/21 (94%)
 Frame = +3

Query: 316 ELGVPLTKEAGFHQYDVYGDL 336
           ELGVPLTKE GFHQ+DVYG+L
Sbjct: 3   ELGVPLTKEKGFHQFDVYGNL 65


>TC222942 similar to UP|O23042 (O23042) YUP8H12.11 protein, partial (21%)
          Length = 725

 Score =  188 bits (477), Expect = 6e-48
 Identities = 104/216 (48%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
 Frame = +1

Query: 115 SPIVVRLTPEQMAQRQDTELKHIVFGIAASSNLWNTRKEYIKIWWR---PKQTRGVVWLD 171
           +P +V +          T + H+VFGIA+S   W  RKEY KIWW     K  RG V++D
Sbjct: 76  TPKIVEVGSSPQYVSDPTTVDHLVFGIASSGISWPKRKEYSKIWWNWKLNKTMRGCVFVD 255

Query: 172 ----QRVSTQRNEGL-PDIRISDDTSKFRYTNRQGQ-RSALRISRVVTETLKLGLKDVRW 225
               +  +   N+G  P + +S+DTS+F YT + G  RSA+R++RVV ET+ L    VRW
Sbjct: 256 TLPHEENANNNNDGSRPPLCVSEDTSQFLYTYKPGGLRSAIRVARVVKETVALNHSGVRW 435

Query: 226 FVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSSSESHVQNIHFSYAMAYGGGGFAISYPL 285
           +V GDDDT+F   N+V+ LSKYDHR +YYVGS SE +  +  F + MA+GGGGFAIS  L
Sbjct: 436 YVFGDDDTIFFPQNLVKTLSKYDHRLWYYVGSYSEIYEGSQVFGFGMAFGGGGFAISSSL 615

Query: 286 AVELATMQDRCIQRYPALYGSDDRMQACMAELGVPL 321
           A  LA + D CIQRY  LYGSD R+ +C+ ELGV L
Sbjct: 616 AQVLAKVFDSCIQRYSHLYGSDARVYSCITELGVGL 723


>BM893174 similar to GP|15529153|gb AT4g23490/F16G20_190 {Arabidopsis
           thaliana}, partial (22%)
          Length = 422

 Score =  184 bits (467), Expect = 9e-47
 Identities = 82/119 (68%), Positives = 101/119 (83%)
 Frame = +3

Query: 330 YDVYGDLLGLLGAHPVAPLVSLHHLDVVQPIFPSMSRAQSIRHLMESINQDSSGIMQQSI 389
           +DVYG+LLGLL AHPV PLVSLHHLDVV+PIFP++SR Q+++ L   +  D +G++QQSI
Sbjct: 66  FDVYGNLLGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVQALKRLKGPMKLDPAGLIQQSI 245

Query: 390 CYDKNRFWSISVSWGFMVQILRGVLSPRELEMPSRTFLNWYRRADYTAYAFNTRPVAKH 448
           CYDK R W+ISVSWG+ VQI RG  S RE+EMP+RTFLNWY+RADYTAY FNTRPV++H
Sbjct: 246 CYDKARTWTISVSWGYAVQIFRGTFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRH 422


>AI930731 
          Length = 443

 Score =  172 bits (435), Expect = 5e-43
 Identities = 82/138 (59%), Positives = 105/138 (75%)
 Frame = +3

Query: 199 RQGQRSALRISRVVTETLKLGLKDVRWFVMGDDDTVFVVDNVVRILSKYDHRHFYYVGSS 258
           R G RS++R++R V E +     DVRWFV GDDDTVF VDNVVR L++YDH  ++YVGS+
Sbjct: 30  RGGLRSSIRVARAVKEAVDRNETDVRWFVFGDDDTVFFVDNVVRALARYDHSKWFYVGSN 209

Query: 259 SESHVQNIHFSYAMAYGGGGFAISYPLAVELATMQDRCIQRYPALYGSDDRMQACMAELG 318
           SES+ QN+ +S+ MA+GGGGFAISY LA  LA + D C++RY  LYGSD R+ +C+AELG
Sbjct: 210 SESYEQNVKYSFEMAFGGGGFAISYSLARVLARVLDSCLRRYGHLYGSDSRIYSCIAELG 389

Query: 319 VPLTKEAGFHQYDVYGDL 336
           V LT E GFHQ D+ G+L
Sbjct: 390 VALTHEPGFHQLDMRGNL 443


>TC220379 weakly similar to GB|AAQ56819.1|34098873|BT010376 At3g11420
           {Arabidopsis thaliana;} , partial (25%)
          Length = 982

 Score =  137 bits (345), Expect = 1e-32
 Identities = 71/183 (38%), Positives = 108/183 (58%), Gaps = 1/183 (0%)
 Frame = +3

Query: 330 YDVYGDLLGLLGAHPVAPLVSLHHLDVVQPIFPSMSRAQSIRHLMESINQDSSGIMQQSI 389
           +D+ G+  G L AHP+ PLVSLHHLD + P FP+ ++  S++ L+ + + D + I+QQSI
Sbjct: 3   FDIRGNPYGFLAAHPLVPLVSLHHLDQLSPFFPNQTQLHSMKKLISAYHIDPARIVQQSI 182

Query: 390 CYDKNRFWSISVSWGFMVQILRGVLSPRELEMPSRTFLNWYRRADYTAYAFNTRPVAKHP 449
           CYD  R WSIS+SWG+ +QI   +L   +L+MP +TF  W    D   + FNTRP++  P
Sbjct: 183 CYDHKRRWSISISWGYTIQIYTKLLIAADLQMPLQTFQTWRSWKD-GPFIFNTRPMSSDP 359

Query: 450 CQKPFVYYMSKTHFDTASRQIVGVYSRDQTKSPFCRWRMESPEKITSIVVTK-RRDPLRW 508
           CQ+P  +++ +      S  I  +Y R + K   C     + E++  I V+  + DP  W
Sbjct: 360 CQQPARFFLDQATKVGKSGSIT-IYKRHEGKEAKCNREGTNNEEVQRIRVSALKLDPEYW 536

Query: 509 KKV 511
           K V
Sbjct: 537 KNV 545


>TC211513 
          Length = 704

 Score =  119 bits (299), Expect = 3e-27
 Identities = 53/131 (40%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +2

Query: 335 DLLGLLGAHPVAPLVSLHHLDVVQPIFPSMSRAQSIRHLMESINQDSSGIMQQSICYDKN 394
           +L G+L AHP++PL+SLHHL+ V+P+FP M+R Q++ HL+ + N D + I+QQ++CYD++
Sbjct: 2   NLFGMLAAHPLSPLLSLHHLESVEPLFPDMNRVQALEHLIAAANVDPARILQQTVCYDRS 181

Query: 395 RFWSISVSWGFMVQILRGVLSPRELEMPSRTFLNWYRRADYTA-YAFNTRPVAKHPCQKP 453
              + SVSWGF +Q+ +G     +L    RTF+ W R +   A + FNTR   + PC++P
Sbjct: 182 NSLTFSVSWGFAIQVYQGNELLPDLLSLQRTFVPWKRGSKVNANFMFNTRDYPRDPCKRP 361

Query: 454 FVYYMSKTHFD 464
            +++      D
Sbjct: 362 SIFFFKSVASD 394


>CA783416 
          Length = 455

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 30/62 (48%), Positives = 44/62 (70%)
 Frame = +2

Query: 118 VVRLTPEQMAQRQDTELKHIVFGIAASSNLWNTRKEYIKIWWRPKQTRGVVWLDQRVSTQ 177
           V+R    +      T+L+H+VFGIAAS+ LW+ RK YIK+W+R +  RGVVWLD++V ++
Sbjct: 245 VLRRGSRETNPEDRTDLRHLVFGIAASAKLWDQRKSYIKLWYRARDMRGVVWLDEKVKSE 424

Query: 178 RN 179
            N
Sbjct: 425 EN 430


>BE348107 
          Length = 482

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
 Frame = -2

Query: 402 SWGFMVQILRGVLSPRELEMPSRTFLNWYRRADYTAYAFNTRPVAKHPCQKPFVYYMSKT 461
           SWG+ +QI   +L   +L+MP +TF  W R +    + FNTRP++  PCQ+P ++++ + 
Sbjct: 481 SWGYTIQIYTALLIAADLQMPLQTFQTW-RSSMNGPFIFNTRPMSSDPCQQPTMFFLDQA 305

Query: 462 HFDTASRQIVGVYSRDQTKSPFCRWRMESPEKITSIVVTK-RRDPLRWKKVRLLIIFFIQ 520
                S  I  +Y R +     C     +  ++  I VT  + DP  WK V L +   + 
Sbjct: 304 TKVGKSGSIT-IYKRHEGNESKCLRSGTNNLELQRIRVTALKLDPEYWKNVPLSLSLSLS 128

Query: 521 RSNFNTIHTIRFQLKCIRYVWISLFEFI 548
                       + K   + WI + E +
Sbjct: 127 LFTHTCTRAHTIKTKS*IHHWI*ILELL 44


>BU547693 
          Length = 651

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -1

Query: 391 YDKNRFWSISVSWGFMVQILRGVLSPRELEMPSRTFLNWYRRADYTA--YAFNTRPVAKH 448
           Y++   W+ISVSWG+ VQ+ +  +   ++    +TF  W +  +  A  Y FNTR +   
Sbjct: 651 YERRFSWTISVSWGYGVQVFQNNMLLPDVXRVEKTFKQW-KEGNVLAGIYTFNTRELHPD 475

Query: 449 PCQKPFVYYMSK 460
            C++P ++Y+ K
Sbjct: 474 QCKRPTIFYLDK 439


>TC229280 similar to UP|NK61_HUMAN (P78426) Homeobox protein Nkx-6.1, partial
           (5%)
          Length = 463

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = +2

Query: 70  TSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFR---EGEGEEQENKSPIVVRLTPEQM 126
           +++ N+E +   +  +EQM ++ E E E++E++ R   EGEGEE  + +P      P Q 
Sbjct: 182 SNNHNLEEEHSNLNGEEQMAEQVEAEEEEEEEEDRQADEGEGEETGSAAP-----NPRQP 346

Query: 127 AQRQDTELKHIVFGIAASSNLWNTRKEYIKI 157
           ++   T L  +   +A +  L    + Y+ +
Sbjct: 347 SRTPFTNLSQVDADLALARTLQEQERAYMML 439


>BQ253805 
          Length = 425

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
 Frame = +3

Query: 70  TSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFR---EGEGEEQENKSPIVVRLTPEQM 126
           +++ N+E +   +  +EQM ++ E E E++E++ R   EGEGEE  + +P      P Q 
Sbjct: 204 SNNHNLEEEHSNLNGEEQMAEQVEAEEEEEEEEDRQADEGEGEETGSAAP-----NPRQP 368

Query: 127 AQRQDTELKHI 137
           ++   T L  +
Sbjct: 369 SRTPFTNLSQV 401


>CD416464 
          Length = 541

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 14/39 (35%), Positives = 20/39 (50%)
 Frame = -1

Query: 472 GVYSRDQTKSPFCRWRMESPEKITSIVVTKRRDPLRWKK 510
           G Y R +   P CRW+M +P     + V K+ DP  W +
Sbjct: 511 GEYERHRVPHPDCRWKMANPAAFDXVEVYKKPDPHLWDR 395


>TC204091 similar to UP|Q8LLE6 (Q8LLE6) RNA-binding protein AKIP1, partial
           (70%)
          Length = 2075

 Score = 35.0 bits (79), Expect = 0.086
 Identities = 20/61 (32%), Positives = 37/61 (59%)
 Frame = +2

Query: 73  KNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQENKSPIVVRLTPEQMAQRQDT 132
           + +E +V   E +E++++E E+E E+DE++  E E EE+EN       +  +Q  Q+QD 
Sbjct: 128 EEVEEEVEEEEVEEEVEEE-EEEEEEDEEEEEEEEEEEEEND------VVKQQQQQQQDE 286

Query: 133 E 133
           +
Sbjct: 287 D 289


>CA800081 
          Length = 408

 Score = 35.0 bits (79), Expect = 0.086
 Identities = 14/17 (82%), Positives = 16/17 (93%)
 Frame = -1

Query: 219 GLKDVRWFVMGDDDTVF 235
           GLKDVRW VMG+DDTV+
Sbjct: 114 GLKDVRWLVMGNDDTVW 64


>TC222177 similar to UP|Q9SEE9 (Q9SEE9) Arginine/serine-rich protein, partial
           (17%)
          Length = 394

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -1

Query: 83  ENKEQMQDETEKETEQDEDDFREGEGEEQENKSP 116
           E   + + E E+ETE++ ++ RE EGEE+  + P
Sbjct: 223 EEDLEREGERERETEREREEERESEGEEEREEEP 122


>TC227400 similar to UP|Q6R0G3 (Q6R0G3) MYB transcription factor, partial
           (30%)
          Length = 1488

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +2

Query: 345 VAPLVSLHHLDVVQPIFPSMSRAQSIRHLMES 376
           +APL+  HH++V +P  P ++  Q++ H++ +
Sbjct: 602 LAPLIQTHHMEVCRPCHPLVASIQAVLHVLST 697


>TC222389 similar to UP|Q8FZX5 (Q8FZX5) Iron compound ABC transporter,
           permease protein, partial (5%)
          Length = 575

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 27/105 (25%), Positives = 42/105 (39%), Gaps = 2/105 (1%)
 Frame = +2

Query: 51  TLDDTTQDDVHMTSYNISSTSDKNIEHKVLPIENKEQMQDE--TEKETEQDEDDFREGEG 108
           TL D           +IS    K      LP++N  Q  D+  TE+   + ED F     
Sbjct: 29  TLSDLQWMKAVENGXDISKXXVKGKRRDHLPVDNHAQASDDMGTEERLFRSEDTF----- 193

Query: 109 EEQENKSPIVVRLTPEQMAQRQDTELKHIVFGIAASSNLWNTRKE 153
               + +P   RL PE++  ++       V G+      WNTR++
Sbjct: 194 ----DVTPASKRLKPEEINSQKHENEDVSVGGLNEHIFSWNTRRK 316


>TC213837 
          Length = 1021

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 22/80 (27%), Positives = 41/80 (50%), Gaps = 1/80 (1%)
 Frame = +1

Query: 60  VHMTSYNISSTSDKNIEHKVLPIENKEQMQDETEKETEQDEDDFREGEGEEQ-ENKSPIV 118
           V  + Y IS  + KN + K   IE KE+ +D+ + + E + +D +E E +E  + K+P+ 
Sbjct: 703 VEESEYTISILAPKNEDDK--KIEEKEK-EDKLDNKLENELEDKKENEKQEDLKVKNPLP 873

Query: 119 VRLTPEQMAQRQDTELKHIV 138
               P     +QD ++   +
Sbjct: 874 EEKLPVVQIPKQDEKVNKFI 933


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.322    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,879,070
Number of Sequences: 63676
Number of extensions: 363272
Number of successful extensions: 2344
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of query: 548
length of database: 12,639,632
effective HSP length: 102
effective length of query: 446
effective length of database: 6,144,680
effective search space: 2740527280
effective search space used: 2740527280
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)


Medicago: description of AC135230.10