BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135160.2 + phase: 0 /pseudo
(319 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC216280 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7... 414 e-116
TC216279 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7... 228 2e-60
BU578405 similar to GP|17978968|gb| At2g42750/F7D19.25 {Arabidop... 200 8e-52
TC216278 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7... 149 2e-36
TC210418 similar to UP|Q9FMX6 (Q9FMX6) Gb|AAD21732.1, partial (36%) 103 8e-23
CO985140 95 4e-20
TC213168 similar to UP|Q97YQ7 (Q97YQ7) ABC transporter, ATP bind... 71 6e-13
BM176899 similar to GP|27817868|dbj OJ1081_B12.17 {Oryza sativa ... 66 2e-11
TC226780 similar to UP|Q9T024 (Q9T024) DnaJ-like protein (AT4g39... 63 2e-10
TC226781 similar to UP|Q9T024 (Q9T024) DnaJ-like protein (AT4g39... 62 5e-10
TC228163 similar to UP|Q8LEU4 (Q8LEU4) DnaJ protein-like, partia... 60 1e-09
TC228345 similar to PIR|E86237|E86237 protein F14N23.23 [importe... 59 2e-09
TC206385 similar to GB|AAN28820.1|23505921|AY143881 At5g16650/MT... 59 3e-09
TC206386 similar to GB|AAN28820.1|23505921|AY143881 At5g16650/MT... 55 6e-08
TC206876 similar to UP|Q6K8D7 (Q6K8D7) DNAJ heat shock N-termina... 52 3e-07
TC204681 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein... 52 3e-07
TC204682 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein... 52 3e-07
TC214335 similar to PIR|E86237|E86237 protein F14N23.23 [importe... 52 4e-07
TC232105 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partia... 52 5e-07
TC216802 similar to UP|Q8VXV4 (Q8VXV4) At1g24120/F3I6_4 (ARG1-li... 51 8e-07
>TC216280 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7D19.25
{Arabidopsis thaliana;} , partial (74%)
Length = 1291
Score = 414 bits (1065), Expect = e-116
Identities = 224/341 (65%), Positives = 258/341 (74%), Gaps = 26/341 (7%)
Frame = +1
Query: 1 MAQLLTPLYPEALKIHNSSL--CTRSSWQMLQQKTAVSPWRFATPS-CKRRGFGRVRVAT 57
MAQLL+P+ EALKIHN SL C+RSSW+ML + SP F T S KRRGFG+VRV T
Sbjct: 16 MAQLLSPVCMEALKIHNPSLNLCSRSSWRMLVK--GASPCTFLTHSGSKRRGFGKVRV-T 186
Query: 58 EQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFI 117
++S S S+++ A+DYY VLGLLPDATPEQIKKAYYNCMK+CHPDLSGNDPETTNFC FI
Sbjct: 187 AEDSVSPSETI-ADDYYEVLGLLPDATPEQIKKAYYNCMKSCHPDLSGNDPETTNFCMFI 363
Query: 118 NEVYEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDV 177
NEVY VLSDPVQRR+YD+IHGYSLTSINPF+DDSSP+DH FVDEFSCIGCKNCANVA V
Sbjct: 364 NEVYTVLSDPVQRRIYDEIHGYSLTSINPFLDDSSPRDHAFVDEFSCIGCKNCANVAPGV 543
Query: 178 FGIEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSAAQLSLLEDEMRRIERVNLYF* 237
F IEEDFGRAR YNQ GNPEL+Q AI+SCPV CIHWTS+AQLSLLEDEMRR+ERVN+
Sbjct: 544 FAIEEDFGRARAYNQSGNPELVQQAIDSCPVSCIHWTSSAQLSLLEDEMRRVERVNVALM 723
Query: 238 KHKV*MGSALGDVFRMT----------IITAGKYPMGEKT-------------VKILDYE 274
MG+A DVFRM ++ K M + K DY+
Sbjct: 724 VSG--MGTASIDVFRMASSRWEKRQSKVLAKAKLRMMREEGSDKKNSYWDNLWGKQKDYQ 897
Query: 275 NSEEEVKERAKRAAAAARKWREYSRKGGAVKPSTVKLPEAT 315
+S+EEV+ERAKRAA+AAR+WREYS + G KP T KLPEA+
Sbjct: 898 SSDEEVEERAKRAASAARRWREYSSR-GVDKPPTFKLPEAS 1017
>TC216279 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7D19.25
{Arabidopsis thaliana;} , partial (26%)
Length = 584
Score = 228 bits (582), Expect = 2e-60
Identities = 115/157 (73%), Positives = 131/157 (83%)
Frame = +1
Query: 1 MAQLLTPLYPEALKIHNSSLCTRSSWQMLQQKTAVSPWRFATPSCKRRGFGRVRVATEQE 60
MAQLL+P+Y E LK + SS+ SSW++L + +S F T + KRRG GRVRVA E++
Sbjct: 130 MAQLLSPVYTEPLKSNLSSI---SSWRILPKTATLS--NFVTHNGKRRGCGRVRVAAEEK 294
Query: 61 SFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEV 120
SFSTSD+V A+DYYAVLGLLPDATP QIKKAYYNCMK CHPDLS NDPE TNFCTFINEV
Sbjct: 295 SFSTSDTV-ADDYYAVLGLLPDATPAQIKKAYYNCMKACHPDLSDNDPEATNFCTFINEV 471
Query: 121 YEVLSDPVQRRVYDDIHGYSLTSINPFMDDSSPKDHV 157
Y VLSDP+QR +YDDIHGYSLTSINPF+DDSSPKDHV
Sbjct: 472 YGVLSDPIQRMIYDDIHGYSLTSINPFLDDSSPKDHV 582
>BU578405 similar to GP|17978968|gb| At2g42750/F7D19.25 {Arabidopsis
thaliana}, partial (22%)
Length = 429
Score = 200 bits (508), Expect = 8e-52
Identities = 103/144 (71%), Positives = 118/144 (81%)
Frame = +1
Query: 1 MAQLLTPLYPEALKIHNSSLCTRSSWQMLQQKTAVSPWRFATPSCKRRGFGRVRVATEQE 60
MAQLL+P+Y E LK + SS+ SSW+ML KTA +P F T + KRRG GRVRVA+E++
Sbjct: 13 MAQLLSPVYTEPLKSNLSSI---SSWRMLP-KTA-TPSNFVTHNGKRRGCGRVRVASEEK 177
Query: 61 SFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEV 120
SFSTS + +DYYAVLGLLPDATP QIKKAYYNCMK CHPDLS NDPE TNFCTFINEV
Sbjct: 178 SFSTSGTAVVDDYYAVLGLLPDATPGQIKKAYYNCMKACHPDLSDNDPEATNFCTFINEV 357
Query: 121 YEVLSDPVQRRVYDDIHGYSLTSI 144
Y VLSDP+QR +YD+IHGYSLTSI
Sbjct: 358 YGVLSDPIQRMIYDEIHGYSLTSI 429
>TC216278 similar to GB|AAM19907.1|20453337|AY097391 At2g42750/F7D19.25
{Arabidopsis thaliana;} , partial (44%)
Length = 693
Score = 149 bits (376), Expect = 2e-36
Identities = 93/162 (57%), Positives = 108/162 (66%), Gaps = 22/162 (13%)
Frame = +1
Query: 180 IEEDFGRARVYNQFGNPELIQTAIESCPVDCIHWTSAAQLSLLEDEMRRIERVNLYF*KH 239
IEE+FGRARVY+Q G PEL+Q AI+SCPVDCIHWTSAAQLSLLEDEMRR+ERVN+
Sbjct: 1 IEEEFGRARVYSQCGKPELVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRVERVNVALMLS 180
Query: 240 KV*MGSALGDVFRMT----------IITAGKYPM-----GEKTVKILDY-------ENSE 277
MGSA DVFRM ++ K M +KT + +SE
Sbjct: 181 G--MGSAGTDVFRMASSRWEKRQAKVLEQAKLRMMKEKGSDKTDMFWNNLWGKPKDLSSE 354
Query: 278 EEVKERAKRAAAAARKWREYSRKGGAVKPSTVKLPEATSSTK 319
EE+KERAKRAAAAAR+WREYSR+ G KP T KLPE T+STK
Sbjct: 355 EEIKERAKRAAAAARRWREYSRR-GVDKPPTFKLPE-TASTK 474
>TC210418 similar to UP|Q9FMX6 (Q9FMX6) Gb|AAD21732.1, partial (36%)
Length = 598
Score = 103 bits (258), Expect = 8e-23
Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Frame = +1
Query: 72 DYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRR 131
D Y +LG+ Q+K AY + K CHPD++G P + +NE Y +LSDP R
Sbjct: 118 DLYDLLGIDSSCDQSQVKVAYRSLQKRCHPDIAG--PAGHDMAIILNEAYSILSDPNARL 291
Query: 132 VYD-------DIHGYSLTSI-NPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEED 183
YD + G++ I + + S + +FVDE C+GC CA +A F +E
Sbjct: 292 AYDKEQAKSSEFKGFTGRPIYSVWCGSESEQRAIFVDEIKCVGCLKCALLAEKTFAVESV 471
Query: 184 FGRARVYNQFG-NPELIQTAIESCPVDCIHWTSAAQLSLLE 223
+GRARV Q+ +P I AIESCPV+CI + L+ LE
Sbjct: 472 YGRARVVAQWADSPNKIDEAIESCPVNCISAVERSNLAALE 594
>CO985140
Length = 641
Score = 95.1 bits (235), Expect = 4e-20
Identities = 63/131 (48%), Positives = 77/131 (58%), Gaps = 23/131 (17%)
Frame = -2
Query: 208 VDCIHWTSAAQLSLLEDEMRRIERVNLYF*KHKV*MGSALGDVFRMT----------IIT 257
V CIHWT AAQLSLLEDEMR +ERVN+ MG+A DVFRM ++
Sbjct: 475 VSCIHWTXAAQLSLLEDEMRCVERVNVALMLSG--MGTASIDVFRMASSRWEKRQSKVLA 302
Query: 258 AGKYPMGEKT-------------VKILDYENSEEEVKERAKRAAAAARKWREYSRKGGAV 304
K M + K DY++S+EEV+ERAKRAA+AAR+WREYSR+ G
Sbjct: 301 KAKLRMMREEGADKKNSYWDNLWGKQKDYQSSDEEVEERAKRAASAARRWREYSRR-GVD 125
Query: 305 KPSTVKLPEAT 315
K T KLPEA+
Sbjct: 124 KLPTFKLPEAS 92
>TC213168 similar to UP|Q97YQ7 (Q97YQ7) ABC transporter, ATP binding protein,
partial (5%)
Length = 812
Score = 71.2 bits (173), Expect = 6e-13
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 157 VFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQFG-NPELIQTAIESCPVDCIHWTS 215
+FVDE +CIGC+ C + A F ++E G ARV Q+G N + I+ ++ESCPV+CIHW
Sbjct: 29 LFVDENACIGCRECVHHASHTFTMDETQGSARVKVQYGDNDQSIEVSVESCPVNCIHWVE 208
Query: 216 AAQLSLLE 223
+L +LE
Sbjct: 209 TEELPVLE 232
>BM176899 similar to GP|27817868|dbj OJ1081_B12.17 {Oryza sativa (japonica
cultivar-group)}, partial (19%)
Length = 430
Score = 66.2 bits (160), Expect = 2e-11
Identities = 35/77 (45%), Positives = 44/77 (56%)
Frame = +1
Query: 73 YYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRRV 132
YY VLG+ P A+ +IKKAYY + HPD + NDP + E Y+VLSDP QR+
Sbjct: 202 YYDVLGVSPTASEAEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQA 381
Query: 133 YDDIHGYSLTSINPFMD 149
Y D HG S S +D
Sbjct: 382 Y-DAHGKSGISTEAIID 429
>TC226780 similar to UP|Q9T024 (Q9T024) DnaJ-like protein
(AT4g39150/T22F8_50), partial (95%)
Length = 1349
Score = 63.2 bits (152), Expect = 2e-10
Identities = 44/122 (36%), Positives = 61/122 (49%), Gaps = 2/122 (1%)
Frame = +1
Query: 73 YYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRRV 132
YY +LG+ DA+ +IKKAYY + HPD + DP+ + E Y+VLSDP +R
Sbjct: 145 YYDILGVNYDASAAEIKKAYYVKARIVHPDKNPEDPKAAENFQKLGEAYQVLSDPGKRAA 324
Query: 133 YDDIHGYSLTSINPFMDDSSPKDHVFVDEF--SCIGCKNCANVACDVFGIEEDFGRARVY 190
YD+ HG + MD ++ +F EF IG A++A IEED V
Sbjct: 325 YDE-HGKEGVPQDSMMDPTTVFGMIFGSEFFEEYIGQLALASLAS--IEIEEDSQDPEVL 495
Query: 191 NQ 192
Q
Sbjct: 496 RQ 501
>TC226781 similar to UP|Q9T024 (Q9T024) DnaJ-like protein
(AT4g39150/T22F8_50), partial (37%)
Length = 622
Score = 61.6 bits (148), Expect = 5e-10
Identities = 40/120 (33%), Positives = 57/120 (47%)
Frame = +1
Query: 73 YYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRRV 132
YY +LG+ DA+ +IKKAYY + HPD + DP+ + E Y+VLSDP +R
Sbjct: 7 YYDILGVNFDASAAEIKKAYYVKARIVHPDKNPGDPKAAENFQKLGEAYQVLSDPGKRAA 186
Query: 133 YDDIHGYSLTSINPFMDDSSPKDHVFVDEFSCIGCKNCANVACDVFGIEEDFGRARVYNQ 192
YD+ HG + MD ++ +F E+ A + IEED V Q
Sbjct: 187 YDE-HGKEGVPQDSMMDPTTVFGMIFGSEYFEEYIGKLALASLSSIEIEEDSQDPEVLRQ 363
>TC228163 similar to UP|Q8LEU4 (Q8LEU4) DnaJ protein-like, partial (65%)
Length = 1660
Score = 60.1 bits (144), Expect = 1e-09
Identities = 35/104 (33%), Positives = 52/104 (49%), Gaps = 11/104 (10%)
Frame = +2
Query: 70 AEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQ 129
A DYY +LG+ +A+ +IKKAYY K HPD + +DP+ ++ YEVL D +
Sbjct: 392 ARDYYDILGVSKNASSSEIKKAYYGLAKKLHPDTNKDDPQAEKKFQEVSIAYEVLKDEER 571
Query: 130 RRVYDDIHGYSLTS-----------INPFMDDSSPKDHVFVDEF 162
R+ YD + + + NPF + +DH FV F
Sbjct: 572 RQQYDQLGHDAYVNQQSTGFGGEGGFNPF--EQIFRDHDFVKSF 697
>TC228345 similar to PIR|E86237|E86237 protein F14N23.23 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(62%)
Length = 1100
Score = 59.3 bits (142), Expect = 2e-09
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Frame = +1
Query: 67 SVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDP----ETTNFCTFINEVYE 122
++GA DYY +L + DAT E++KKAY HPD + DP E ++E Y+
Sbjct: 178 NMGAGDYYKILKVKHDATDEEVKKAYKKLAMKWHPDKNLEDPLRKEEFEAKFKQVSEAYD 357
Query: 123 VLSDPVQRRVYDDIHGYSLTS 143
VLSDP +R++YD Y L S
Sbjct: 358 VLSDPKKRQIYDLYGHYPLNS 420
>TC206385 similar to GB|AAN28820.1|23505921|AY143881 At5g16650/MTG13_10
{Arabidopsis thaliana;} , partial (77%)
Length = 1015
Score = 58.9 bits (141), Expect = 3e-09
Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 53 VRVATEQESFSTSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTN 112
V+ A + +D+ +DYY VL + DAT E IK Y HPD G D T
Sbjct: 280 VKEAAHVDPMFVADNTNPKDYYKVLEVEYDATDENIKLNYRRLALKWHPDKHGGDSAVTA 459
Query: 113 FCTFINEVYEVLSDPVQRRVYD-----DIHGYSL 141
INE Y VLSDP +R YD +I YSL
Sbjct: 460 KFQEINEAYNVLSDPTKRLDYDLTGICEIEKYSL 561
>TC206386 similar to GB|AAN28820.1|23505921|AY143881 At5g16650/MTG13_10
{Arabidopsis thaliana;} , partial (77%)
Length = 867
Score = 54.7 bits (130), Expect = 6e-08
Identities = 35/89 (39%), Positives = 42/89 (46%), Gaps = 5/89 (5%)
Frame = +2
Query: 63 STSDSVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYE 122
+ +D+ +DYY VL + DAT E IK Y HPD G D T I E Y
Sbjct: 278 AAADNTNPKDYYKVLEVEYDATDENIKLNYRRLALKWHPDKHGGDSAVTAKFQEIIEAYN 457
Query: 123 VLSDPVQRRVYD-----DIHGYSLTSINP 146
VLSDP +R YD +I YSL P
Sbjct: 458 VLSDPAKRLDYDLTGICEIEKYSLQEYLP 544
>TC206876 similar to UP|Q6K8D7 (Q6K8D7) DNAJ heat shock N-terminal
domain-containing protein-like, partial (83%)
Length = 682
Score = 52.4 bits (124), Expect = 3e-07
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +2
Query: 71 EDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQR 130
+DYY +L + DAT + I+ Y HPD + T+ INE Y+VLSDPV+R
Sbjct: 173 KDYYKILEVDYDATDDAIRSNYIRLALKWHPDKHKDQNSATSRFQDINEAYQVLSDPVKR 352
Query: 131 RVYD 134
R YD
Sbjct: 353 REYD 364
>TC204681 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein PM37,
complete
Length = 1542
Score = 52.4 bits (124), Expect = 3e-07
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +3
Query: 73 YYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRRV 132
YY +LG+ +A+P+ +KKAY HPD G DPE + + YEVLSDP +R +
Sbjct: 150 YYEILGVSKNASPDDLKKAYKKAAIKNHPD-KGGDPEKFK---ELAQAYEVLSDPEKREI 317
Query: 133 YD 134
YD
Sbjct: 318 YD 323
>TC204682 homologue to UP|Q9SWB5 (Q9SWB5) Seed maturation protein PM37,
partial (27%)
Length = 447
Score = 52.4 bits (124), Expect = 3e-07
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +2
Query: 73 YYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRRV 132
YY +LG+ +A+P+ +KKAY HPD G DPE + + YEVLSDP +R +
Sbjct: 143 YYEILGVSKNASPDDLKKAYKKAAIKNHPD-KGGDPEKFK---ELAQAYEVLSDPEKREI 310
Query: 133 YD 134
YD
Sbjct: 311 YD 316
>TC214335 similar to PIR|E86237|E86237 protein F14N23.23 [imported] -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(63%)
Length = 1124
Score = 52.0 bits (123), Expect = 4e-07
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Frame = +1
Query: 68 VGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCT---------FIN 118
+GA DYY +L + +AT E++K+AY HPD N P T ++
Sbjct: 55 MGAGDYYKILKMNRNATDEELKRAYKRLAMKWHPD--KNHPHHHQHVTKEEAEAKFKQVS 228
Query: 119 EVYEVLSDPVQRRVYDDIHGYSLTSI 144
E Y+VLSDP +R++YD Y L S+
Sbjct: 229 EAYDVLSDPKKRQIYDFYGHYPLNSM 306
>TC232105 similar to UP|Q9FEW7 (Q9FEW7) DnaJ like protein, partial (25%)
Length = 315
Score = 51.6 bits (122), Expect = 5e-07
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 72 DYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLS-GNDPETTNFCTFINEVYEVLSDPVQR 130
DYY +L + AT E++KKAY HPD + N E I+E YEVLSDP +R
Sbjct: 61 DYYKILQVDKHATDEELKKAYRKLAMKWHPDKNPTNKKEAETKFKQISEAYEVLSDPQKR 240
Query: 131 RVYDD 135
+YD+
Sbjct: 241 AIYDE 255
>TC216802 similar to UP|Q8VXV4 (Q8VXV4) At1g24120/F3I6_4 (ARG1-like protein
1), partial (81%)
Length = 1762
Score = 50.8 bits (120), Expect = 8e-07
Identities = 25/63 (39%), Positives = 35/63 (54%)
Frame = +2
Query: 72 DYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRR 131
D Y VLG+ ++T ++IK AY HPD + NDP+ + Y +LSDP +RR
Sbjct: 350 DPYEVLGISRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEATFSYNILSDPDKRR 529
Query: 132 VYD 134
YD
Sbjct: 530 QYD 538
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,833,191
Number of Sequences: 63676
Number of extensions: 203922
Number of successful extensions: 1260
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of query: 319
length of database: 12,639,632
effective HSP length: 97
effective length of query: 222
effective length of database: 6,463,060
effective search space: 1434799320
effective search space used: 1434799320
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC135160.2