Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135100.7 + phase: 0 /pseudo
         (855 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC211561 weakly similar to UP|O22675 (O22675) Reverse transcript...   162  4e-40
CD417230 weakly similar to GP|2244915|emb| reverse transcriptase...   107  3e-34
CO982349                                                              118  1e-26
TC233727 similar to UP|Q9FKH8 (Q9FKH8) Similarity to non-LTR ret...    64  1e-22
TC213164                                                               78  2e-14
AW757033                                                               74  3e-13
TC216314 similar to GB|AAP68269.1|31711826|BT008830 At1g70320 {A...    74  4e-13
TC212765                                                               70  3e-12
BI972659                                                               67  3e-11
BE329487 weakly similar to PIR|T14619|T146 reverse transcriptase...    66  7e-11
CA783280 weakly similar to PIR|T01871|T01 RNA-directed DNA polym...    63  6e-10
BI315739                                                               62  8e-10
BM891241                                                               56  6e-08
BI321779                                                               56  6e-08
CF922212                                                               56  8e-08
AI496436                                                               55  2e-07
BI470652 similar to PIR|T17102|T171 RNA-directed DNA polymerase ...    43  5e-04
BM891637                                                               42  0.002
TC233219 weakly similar to UP|Q8LKI9 (Q8LKI9) NBS/LRR resistance...    40  0.003
BI471325                                                               36  0.063

>TC211561 weakly similar to UP|O22675 (O22675) Reverse transcriptase
           (Fragment) , partial (59%)
          Length = 1077

 Score =  162 bits (411), Expect = 4e-40
 Identities = 102/313 (32%), Positives = 163/313 (51%)
 Frame = +1

Query: 487 NAIIAQEVVHYMHTSRSQKGTLALKIYLEKAYDRLDWSFLELTLHDFGFPHHIIGLIMSC 546
           +A+IA EV+      RS K  L  K+  EKAYD + W+FL   +    F    I  I  C
Sbjct: 7   SALIANEVID--EAKRSNKSCLVFKVDYEKAYDSVSWNFLMYMMWRMDFSPKWIKWIEEC 180

Query: 547 VKASDLAILWNGAKTNKFKPTKGLRQGDPLSPYLFVLCMEKLAMHIQGKVEDRS*RPIHI 606
           VK++ +++L NG+ T +F P +GLRQGDPL+P+LF +  E L   ++  VE+   +P  +
Sbjct: 181 VKSASISVLVNGSPTAEFLPQRGLRQGDPLTPFLFNIVAEGLNGLMRRAVEENLYKPYLV 360

Query: 607 SKDGPGLSHLTFADDVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKSMCSKRVPE 666
             +G  +S L +ADD + F EA  + V+ +   L  F   S L++N  KS       V +
Sbjct: 361 GANGVPISILQYADDTIFFGEAAKENVEAIKVILRSFELVSNLRINFAKS-CFGVFGVTD 537

Query: 667 RTKRDIQGISSIRLVSNLGHYLGFPLVQGRVTNETYKHIIEKMHHRLASWKGKLLNKSGR 726
           + K++        L++    YLG P+         +  II K   +L+ WK + ++  GR
Sbjct: 538 QWKQEAANYLHCSLLAFPFIYLGIPIGANSRRCHMWDSIIRKCERKLSKWK*RHISFGGR 717

Query: 727 VCLEKSVTTSMPVYSMQINLLRKELCDGIDKITKSFIWGGNGVT*KWNMVKWTTVTSPRK 786
           V L KSV TS+P+Y      + + + D + KI ++F+WGG     K + ++W  +  P++
Sbjct: 718 VTLIKSVLTSIPIYFFSFFRVPQSVVDKLVKI*RTFLWGGGPDQKKISWIRWEKLCLPKE 897

Query: 787 FGGLAIRDARNTN 799
            GG+  R   N N
Sbjct: 898 RGGI*KRLPNNHN 936


>CD417230 weakly similar to GP|2244915|emb| reverse transcriptase like
           protein {Arabidopsis thaliana}, partial (7%)
          Length = 688

 Score =  107 bits (267), Expect(2) = 3e-34
 Identities = 52/119 (43%), Positives = 78/119 (64%)
 Frame = -3

Query: 540 IGLIMSCVKASDLAILWNGAKTNKFKPTKGLRQGDPLSPYLFVLCMEKLAMHIQGKVEDR 599
           + L+  C+  + +++LWNG   + F P  G+RQ DP++PYLFVLC+E+L+  I   +  +
Sbjct: 686 VQLVWYCMSTTTMSLLWNGEVLDHFSPNIGVRQRDPIAPYLFVLCLERLSHLINLVMNKK 507

Query: 600 S*RPIHISKDGPGLSHLTFADDVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKS 658
            *R I +++ G  +SHL F DD++LF EAN  QV ++  TL  F  +SG KVNV K+KS
Sbjct: 506 L*RSIQVNRGGLLISHLAFVDDLILFVEANMDQVDVINLTLELFSDSSGAKVNVDKTKS 330



 Score = 57.4 bits (137), Expect(2) = 3e-34
 Identities = 34/95 (35%), Positives = 51/95 (52%)
 Frame = -2

Query: 661 SKRVPERTKRDIQGISSIRLVSNLGHYLGFPLVQGRVTNETYKHIIEKMHHRLASWKGKL 720
           SK V    + DI     ++   +LG YLG P+     T+ T+  II+K++ R + WK  L
Sbjct: 321 SKNVNWWVEEDISSGLGLQSTDDLGKYLGVPIFHKNPTSHTFDFIIDKVNKRFSRWKSNL 142

Query: 721 LNKSGRVCLEKSVTTSMPVYSMQINLLRKELCDGI 755
           L+  GR+ L K V  ++P + MQ + L   LC GI
Sbjct: 141 LSMVGRLTLTK*VV*ALPSHIMQFDNL---LCMGI 46


>CO982349 
          Length = 795

 Score =  118 bits (295), Expect = 1e-26
 Identities = 72/242 (29%), Positives = 122/242 (49%)
 Frame = +3

Query: 543 IMSCVKASDLAILWNGAKTNKFKPTKGLRQGDPLSPYLFVLCMEKLAMHIQGKVEDRS*R 602
           I  C+ ++ ++IL N +  N+F P +GLRQGDPL+P LF +  E L   ++  V+ +   
Sbjct: 72  IRGCLHSASVSILVNESPINEFSPQRGLRQGDPLAPLLFNIVAEGLTGLMREAVDRKRFN 251

Query: 603 PIHISKDGPGLSHLTFADDVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKSMCSK 662
              + K+   +S L +ADD + F EA  + ++++   L  F  ASGLK+N  +S+     
Sbjct: 252 SFLVGKNKEPVSILQYADDTIFFEEATMENMKVIKTILRCFELASGLKINFAESRFGAIW 431

Query: 663 RVPERTKRDIQGISSIRLVSNLGHYLGFPLVQGRVTNETYKHIIEKMHHRLASWKGKLLN 722
           + P+   ++     +  ++S    YLG P+       E    II K   +LA WK + ++
Sbjct: 432 K-PDHWCKEAAEFLNCSMLSMPFSYLGIPIEANPRCREI*DPIIRKCETKLARWKQRHIS 608

Query: 723 KSGRVCLEKSVTTSMPVYSMQINLLRKELCDGIDKITKSFIWGGNGVT*KWNMVKWTTVT 782
             GRV L  ++ T++P+Y         ++   +  I + F+WGG     +   VKW TV 
Sbjct: 609 LGGRVTLINAILTALPIYFFSFFRAPSKVVQKLVNIQRKFLWGGGSXQRRIAWVKWETVC 788

Query: 783 SP 784
            P
Sbjct: 789 LP 794


>TC233727 similar to UP|Q9FKH8 (Q9FKH8) Similarity to non-LTR retroelement
           reverse transcriptase, partial (7%)
          Length = 956

 Score = 63.5 bits (153), Expect(2) = 1e-22
 Identities = 37/131 (28%), Positives = 66/131 (50%)
 Frame = -2

Query: 614 SHLTFADDVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKSMCSKRVPERTKRDIQ 673
           SH+  ADD+++FC+  ++ V  +I+    +  + G  ++  KSK      +P +  R I 
Sbjct: 451 SHVMHADDIMIFCKGTSRNVHNLINFFQLYKDSFGQVISKHKSKIFIGS-IPGQRLRVIS 275

Query: 674 GISSIRLVSNLGHYLGFPLVQGRVTNETYKHIIEKMHHRLASWKGKLLNKSGRVCLEKSV 733
            +          +Y G P+ +G+ T      + +K+  +LASWKG +L+  GR+ L  SV
Sbjct: 274 DLLQYFHSDIPFNYFGVPIFKGKPTRRHLYCVADKIKCKLASWKGSILSIMGRIQLVNSV 95

Query: 734 TTSMPVYSMQI 744
              M +YS  +
Sbjct: 94  IHGMLLYSFSV 62



 Score = 62.4 bits (150), Expect(2) = 1e-22
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = -3

Query: 486 DNAIIAQEVVHYMHTSRSQKGTLALKIYLEKAYDRLDWSFLELTLHDFGFPHHIIGLIMS 545
           D   +  EV++ M   +   G LALKI + KA+D LD  FL   L+ FG+ H     I  
Sbjct: 828 DCTCVTSEVIN-MLDKKVFGGNLALKIDIVKAFDTLDRDFLISVLNKFGYSHTFCNWIRV 652

Query: 546 CVKASDLAILWNGAKTNKFKPTKGLRQGDPLSPYLF-VLCMEKLAMHI 592
            + ++ L+I  NG     F   +G+RQGDPLSP L+   C+E+  +++
Sbjct: 651 ILLSAKLSISVNGEPVGFFSCQRGVRQGDPLSPSLYRQRCLEQGTIYV 508


>TC213164 
          Length = 446

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 41/128 (32%), Positives = 67/128 (52%)
 Frame = +3

Query: 368 KEEVKDALFSMQSDKAPGPDGFQPLFFKHFWEKTGESLWELVDISFRRGFIDEAIVETLL 427
           K+EV+  ++   + K+PGPDG    F K FW+     L   +D  +  G   +      L
Sbjct: 36  KKEVRATMWDRGNAKSPGPDGLNFKFIKEFWDILKTDLLRFLDEFYANGVFLKRSNAFFL 215

Query: 428 VLIPKENNPTHLKNFRPISLCNVIFKVITKVLVNRIRPFLDELVSPFQSNFIPRRGTTDN 487
            LIPK ++P  L  ++PISL   I+K++ K+L  R +  L  ++   Q+ F+  R T  N
Sbjct: 216 ALIPKVHDP*SLNEYKPISLIGCIYKIVAKLLSGRHKKVLPTIIDERQTVFMEGRHTLHN 395

Query: 488 AIIAQEVV 495
            +IA E++
Sbjct: 396 VVIANEIM 419


>AW757033 
          Length = 441

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 49/146 (33%), Positives = 75/146 (50%)
 Frame = -2

Query: 561 TNKFKPTKGLRQGDPLSPYLFVLCMEKLAMHIQGKVEDRS*RPIHISKDGPGLSHLTFAD 620
           T +F P +GLRQGDPL+P LF +  E L   ++  V     +   + K    +S L +AD
Sbjct: 440 TREFSPHRGLRQGDPLAPLLFNIAAEGLTGLMREAVARNHYKSFAVGKYKKPVSILQYAD 261

Query: 621 DVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKSMCSKRVPERTKRDIQGISSIRL 680
           D + F EA  + V+++   L  F  ASGLK+N  KS+   +  VP+  +++     +  L
Sbjct: 260 DTIFFGEATMENVRVIKTILRGFELASGLKINFAKSR-FGAISVPD*WRKEAAEFMNCSL 84

Query: 681 VSNLGHYLGFPLVQGRVTNETYKHII 706
           +S    YLG P+       ET+  II
Sbjct: 83  LSLPFSYLGIPIGANPRRRETWDPII 6


>TC216314 similar to GB|AAP68269.1|31711826|BT008830 At1g70320 {Arabidopsis
           thaliana;} , partial (18%)
          Length = 759

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 34/97 (35%), Positives = 55/97 (56%)
 Frame = +2

Query: 725 GRVCLEKSVTTSMPVYSMQINLLRKELCDGIDKITKSFIWGGNGVT*KWNMVKWTTVTSP 784
           GRV L KSV +++P+  +    + + + D +  + + F+WGG     +   VKW  + +P
Sbjct: 8   GRVTLIKSVLSALPIXXLSFFKIPQRIVDKLVTLQRQFLWGGTQHHNRIPWVKWADICNP 187

Query: 785 RKFGGLAIRDARNTNLALLGKLVWSLLHDKNKLWVRL 821
           +  GGL I+D  N N AL G+ +W L  + N+LW RL
Sbjct: 188 KIDGGLGIKDLSNFNAALRGRWIWGLASNHNQLWARL 298


>TC212765 
          Length = 637

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 48/146 (32%), Positives = 69/146 (46%)
 Frame = +3

Query: 578 PYLFVLCMEKLAMHIQGKVEDRS*RPIHISKDGPGLSHLTFADDVLLFCEANTQQVQMVI 637
           PYLFVLCME+LA+ I         RPI +S D   + +L   DD+ LF  A      +  
Sbjct: 15  PYLFVLCMERLALCIHDLTSQ*IWRPILVSDDNRLVPYLMLVDDIFLFINAIGD*AYLAS 194

Query: 638 DTLNEFCSASGLKVNVTKSKSMCSKRVPERTKRDIQGISSIRLVSNLGHYLGFPLVQGRV 697
            TL  F    GLK+N+ KS   CS R+    +  I    +I    +LG YL    + GR 
Sbjct: 195 LTL*NFFQTFGLKLNLDKSSMYCS*RMAPVLRDLISNTLNIVHAPSLGKYLCLKFIHGRS 374

Query: 698 TNETYKHIIEKMHHRLASWKGKLLNK 723
               +  ++E++H+     +G  L K
Sbjct: 375 KIVDFL-LVERIHNPWPRGRGSFLTK 449



 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 27/72 (37%), Positives = 42/72 (57%)
 Frame = +2

Query: 713 LASWKGKLLNKSGRVCLEKSVTTSMPVYSMQINLLRKELCDGIDKITKSFIWGGNGVT*K 772
           LASWKGKLLN++ + CL   V  + P+Y M+ + L + +   IDK ++  IW   G +  
Sbjct: 416 LASWKGKLLNQASKHCLT*LVLHAFPIYPMEASWLPQSIFQAIDKASRVTIWNKVGASLS 595

Query: 773 WNMVKWTTVTSP 784
           W+ V  +T + P
Sbjct: 596 WHSVS*STASKP 631


>BI972659 
          Length = 453

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 39/141 (27%), Positives = 69/141 (48%)
 Frame = +1

Query: 627 EANTQQVQMVIDTLNEFCSASGLKVNVTKSKSMCSKRVPERTKRDIQGISSIRLVSNLGH 686
           EA+   + ++   L  F   SGL++N  KS+       P     D   + + R +    H
Sbjct: 7   EASWDNIIVLKSMLRGFEMVSGLRINYAKSQFGIVGFQPNWA-HDAAQLLNCRQLDIPFH 183

Query: 687 YLGFPLVQGRVTNETYKHIIEKMHHRLASWKGKLLNKSGRVCLEKSVTTSMPVYSMQINL 746
           YLG P+     +   ++ +I K   +L+ W  K L+  GRV L KSV  ++P+Y +    
Sbjct: 184 YLGMPIAVKASSRMVWEPLINKFKAKLSKWNQKYLSMGGRVTLIKSVLNALPIYLLSFFK 363

Query: 747 LRKELCDGIDKITKSFIWGGN 767
           + + + D +  + ++F+WGGN
Sbjct: 364 IPQRIVDKLVSLQRTFMWGGN 426


>BE329487 weakly similar to PIR|T14619|T146 reverse transcriptase - beet
           retrotransposon (fragment), partial (15%)
          Length = 376

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 30/88 (34%), Positives = 48/88 (54%)
 Frame = -2

Query: 371 VKDALFSMQSDKAPGPDGFQPLFFKHFWEKTGESLWELVDISFRRGFIDEAIVETLLVLI 430
           +K A++   S K+PGPDG    F KHFWE+    +   ++     G   +    + + LI
Sbjct: 375 IKSAVWQCGSVKSPGPDGLNFKFIKHFWERLKPDIIRFLNEFHANGIFPKGGNASFIALI 196

Query: 431 PKENNPTHLKNFRPISLCNVIFKVITKV 458
           PK  +P  L +FRPISL   ++K++ K+
Sbjct: 195 PKVKHPQALNDFRPISLIGCVYKIVAKI 112


>CA783280 weakly similar to PIR|T01871|T01 RNA-directed DNA polymerase
           homolog T24M8.8 - Arabidopsis thaliana, partial (4%)
          Length = 456

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 31/84 (36%), Positives = 46/84 (53%)
 Frame = +2

Query: 755 IDKITKSFIWGGNGVT*KWNMVKWTTVTSPRKFGGLAIRDARNTNLALLGKLVWSLLHDK 814
           ++ + + F+WGG   + K   V W TV  P+  GGL I+D R  N  LLGK  W L + +
Sbjct: 41  LESLQRRFLWGGEADSRKIAWVNWKTVCLPKAKGGLGIKDLRTFNTTLLGKWRWDLFYIQ 220

Query: 815 NKLWVRLLSGKIY*EWLFMEQRSS 838
            + W ++L  K Y  W  +E+ SS
Sbjct: 221 QEPWAKVLQSK-YGGWRALEEGSS 289


>BI315739 
          Length = 442

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 48/152 (31%), Positives = 76/152 (49%), Gaps = 7/152 (4%)
 Frame = +3

Query: 575 PLSPYLFVLCMEKLAMHIQGKVEDRS*RPIHISKDGPGLSHLTFADDVLLFCEANTQQVQ 634
           PLSPYLF +CMEKLA+ IQ KV + +  PI IS++GPG+S +  +  ++ F        +
Sbjct: 48  PLSPYLF*ICMEKLAILIQSKVNEETWEPIKISRNGPGISPIYSSQIIVYFL------*K 209

Query: 635 MVIDTLN--EFCSASGLKVNVTKSKSMCSKRV-PERTKRDIQG----ISSIRLVSNLGHY 687
            ++  LN  E C               C+  V PE ++R  +        + L+  L   
Sbjct: 210 PLVLKLNW*EMC---------------CNSFV*PEVSRRVFKNPGF*HKRMCLIEKLPGS 344

Query: 688 LGFPLVQGRVTNETYKHIIEKMHHRLASWKGK 719
           L   L+ GR   E + H+++ +++RL  WK K
Sbjct: 345 LL**LLAGRTKKEDFAHVVDMINNRLDGWKSK 440


>BM891241 
          Length = 407

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 26/61 (42%), Positives = 37/61 (60%)
 Frame = -2

Query: 765 GGNGVT*KWNMVKWTTVTSPRKFGGLAIRDARNTNLALLGKLVWSLLHDKNKLWVRLLSG 824
           GG+    K   VKW  V  P+  GGL I+D    N+ALLGK +W+L  D+ +LW R+++ 
Sbjct: 406 GGDHDHKKIPWVKWEVVCLPKTKGGLGIKDISKFNIALLGKWIWALASDQQQLWARIINS 227

Query: 825 K 825
           K
Sbjct: 226 K 224


>BI321779 
          Length = 421

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 28/89 (31%), Positives = 45/89 (50%)
 Frame = +2

Query: 369 EEVKDALFSMQSDKAPGPDGFQPLFFKHFWEKTGESLWELVDISFRRGFIDEAIVETLLV 428
           EE+K  +   +S K+PGPDG+  L  K FWE   E +        +  F+      + + 
Sbjct: 104 EEIKKVI*DCESSKSPGPDGYSLLLIKIFWEVIKEEVINFFKEFHKFDFLPRGTNRSFIA 283

Query: 429 LIPKENNPTHLKNFRPISLCNVIFKVITK 457
           LI K +NP  +  + PISL   ++K++ K
Sbjct: 284 LIAKCDNPLDIGQYCPISLVGCLYKIV*K 370


>CF922212 
          Length = 445

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = -2

Query: 750 ELCDGIDKITKSFIWGGNGVT*KWNMVKWTTVTSPRKFGGLAIRDARNTNLALLGKLVWS 809
           ++ D + ++ + F+WGG     K   V W +V  P++  GL  RD R  N ALLGK  W+
Sbjct: 432 KVLDKLVRLQQWFLWGGGLGQKKIAWVNWDSVCLPKEKEGLGNRDLRKFNYALLGKRRWN 253

Query: 810 LLHDKNKLWVRLLSGKIY*EWLFMEQRSSEK 840
           L H + +L  R+L  K Y  W  +++    K
Sbjct: 252 LFHHQGELGARVLDSK-YKRWRNLDEERRVK 163


>AI496436 
          Length = 414

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
 Frame = +1

Query: 646 ASGLKVNVTKSK--SMCSKRVPERTKRDIQGISSIRLVSNLGHYLGFPLVQGRVTNETYK 703
           +SGLK+N  KS+  ++C   +  +   D    S   ++S    YLG P+      ++ ++
Sbjct: 25  SSGLKINFAKSQFGTICKSDIWRKEAADYLNSS---VLSMPFVYLGIPIGANSRHSDVWE 195

Query: 704 HIIEKMHHRLASWKGKLLNKSGRVCLEKSVTTSMPVYSMQINLLRKELCDGID 756
            ++ K   +LASWK K ++  GRV L  SV T++P+Y +    +  ++ D  D
Sbjct: 196 PVVRKCERKLASWKQKYVSFGGRVTLINSVLTALPIYLLSFFRIPDKVVDKAD 354


>BI470652 similar to PIR|T17102|T171 RNA-directed DNA polymerase (EC
           2.7.7.49) (clone AmLi2) - garden snapdragon (fragment),
           partial (22%)
          Length = 111

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 16/34 (47%), Positives = 25/34 (73%)
 Frame = +1

Query: 546 CVKASDLAILWNGAKTNKFKPTKGLRQGDPLSPY 579
           C+ ++ ++IL NG+ T +FKP +GLRQG P  P+
Sbjct: 7   CLSSASISILVNGSPTEEFKPXRGLRQGGPFGPF 108


>BM891637 
          Length = 427

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 23/68 (33%), Positives = 34/68 (49%)
 Frame = -1

Query: 776 VKWTTVTSPRKFGGLAIRDARNTNLALLGKLVWSLLHDKNKLWVRLLSGKIY*EWLFMEQ 835
           + W    +    GGL I+D +  N ALL K  W + H  ++LW R+L  K Y  W  ++Q
Sbjct: 403 ISWRQCCASGDVGGLGIKDIKILNNALLIKWKWLMFHQPHQLWNRILISK-YKGWRGLDQ 227

Query: 836 RSSEKPFS 843
              +  FS
Sbjct: 226 GPQKYYFS 203


>TC233219 weakly similar to UP|Q8LKI9 (Q8LKI9) NBS/LRR resistance
           protein-like protein (Fragment), partial (74%)
          Length = 781

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/102 (28%), Positives = 48/102 (46%)
 Frame = +3

Query: 558 GAKTNKFKPTKGLRQGDPLSPYLFVLCMEKLAMHIQGKVEDRS*RPIHISKDGPGLSHLT 617
           G +++ F  T GL QG  LSPYLF L ++ L   IQ  V                   + 
Sbjct: 99  GGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIVS----------------RCML 230

Query: 618 FADDVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKSM 659
           FADD++L  E+  +++   ++T        G +++ +KS+ M
Sbjct: 231 FADDIVLLGESR-EKLNERLETWRRALETHGFRLSRSKSEYM 353


>BI471325 
          Length = 421

 Score = 36.2 bits (82), Expect = 0.063
 Identities = 21/59 (35%), Positives = 32/59 (53%)
 Frame = +2

Query: 613 LSHLTFADDVLLFCEANTQQVQMVIDTLNEFCSASGLKVNVTKSKSMCSKRVPERTKRD 671
           LSHL   D   LFC    ++  ++ + L  F ++SGL VN+ KS+ +C  R   +  RD
Sbjct: 44  LSHLLSVDFYFLFCRTIDKEADVLKNILTTFEASSGLVVNLRKSE-ICFSRNTSQIARD 217


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.345    0.152    0.514 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,683,510
Number of Sequences: 63676
Number of extensions: 570372
Number of successful extensions: 5009
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3680
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 1269
Number of HSP's gapped (non-prelim): 3913
length of query: 855
length of database: 12,639,632
effective HSP length: 105
effective length of query: 750
effective length of database: 5,953,652
effective search space: 4465239000
effective search space used: 4465239000
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 63 (28.9 bits)


Medicago: description of AC135100.7