BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134322.18 - phase: 0
(488 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC217700 similar to PIR|T04886|T04886 DAG protein homolog F18F4.... 300 1e-81
TC217698 similar to UP|Q89GY6 (Q89GY6) Blr6209 protein, partial ... 196 3e-50
TC203450 homologue to UP|DAG_ANTMA (Q38732) DAG protein, chlorop... 146 2e-35
TC217631 similar to UP|WAIP_HUMAN (O43516) Wiskott-Aldrich syndr... 145 5e-35
TC216839 135 5e-32
TC214189 homologue to UP|Q8L949 (Q8L949) Plastid protein, partia... 129 3e-30
TC203462 homologue to UP|DAG_ANTMA (Q38732) DAG protein, chlorop... 127 1e-29
TC214418 homologue to UP|Q8L949 (Q8L949) Plastid protein, partia... 123 2e-28
TC214320 similar to UP|O22793 (O22793) Plastid protein (At2g3343... 120 2e-27
AW706156 96 5e-20
TC214263 homologue to UP|Q8L949 (Q8L949) Plastid protein, partia... 77 1e-14
TC214115 similar to UP|O22793 (O22793) Plastid protein (At2g3343... 65 5e-11
TC217699 62 4e-10
CD392737 61 1e-09
TC204718 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17... 58 1e-08
TC204721 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17... 58 1e-08
TC214435 similar to UP|O22793 (O22793) Plastid protein (At2g3343... 54 2e-07
TC222125 52 5e-07
TC223403 50 2e-06
TC233960 similar to UP|OPSD_SEPOF (O16005) Rhodopsin, partial (10%) 50 2e-06
>TC217700 similar to PIR|T04886|T04886 DAG protein homolog F18F4.120 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(28%)
Length = 760
Score = 300 bits (768), Expect = 1e-81
Identities = 145/201 (72%), Positives = 164/201 (81%), Gaps = 8/201 (3%)
Frame = +2
Query: 97 LLSSRYGETSELSPEIGPDTILFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGL 156
L R G+ + + EIGPDTILFEGCDYNHWL V +F +NKP PE+M+R+YEETCAKGL
Sbjct: 164 LFDPRSGQNN-IPDEIGPDTILFEGCDYNHWLIVMEFKDNNKPSPEDMVRVYEETCAKGL 340
Query: 157 NISVEEAKKKIYACSTTTYTGFQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQ 216
NIS+EEAKKK+YACSTTTY GFQAVMTEEESKKFEG+PGVIFVLPDSYIDPVNKQYGGDQ
Sbjct: 341 NISLEEAKKKMYACSTTTYIGFQAVMTEEESKKFEGLPGVIFVLPDSYIDPVNKQYGGDQ 520
Query: 217 YIEGQIIPRPPPVQFGRNLGGRRDY--------RQNNQLPNNRGNPSYNNRDSMPRDGRN 268
YI G IIPRPPPVQ+GRN GRRD+ RQ N +P+ +GNPSYN++ MPR GRN
Sbjct: 521 YINGTIIPRPPPVQYGRN-QGRRDWNKSPGQYNRQENPVPSPQGNPSYNSQGPMPRGGRN 697
Query: 269 YGPPQNFPPQQNHGQASHIPP 289
YGP QN+PPQQN GQAS P
Sbjct: 698 YGPSQNYPPQQNSGQASQNYP 760
Score = 38.9 bits (89), Expect = 0.005
Identities = 29/105 (27%), Positives = 41/105 (38%)
Frame = +2
Query: 311 PQQSYDQASQRYPPQQSYDQASQGYLPKQNYGQAPQNYSAPQAPQNYSQQQTYGPASPQY 370
P D +++Y Q + P YG+ ++P Y++Q+ P+
Sbjct: 473 PDSYIDPVNKQYGGDQYINGTIIPRPPPVQYGRNQGRRDWNKSPGQYNRQENPVPSPQGN 652
Query: 371 PPQQSFGPLGEGERRNYAPQQNFGPPGEVDRRNYAPQQNFGPPRQ 415
P S GP+ G RNY P Q NY PQQN G Q
Sbjct: 653 PSYNSQGPMPRG-GRNYGPSQ-----------NYPPQQNSGQASQ 751
Score = 32.7 bits (73), Expect = 0.38
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 85 IQSRSFRSTSISLLSSRYGETSELSP 110
+QSRSFRS+SISLLS R + +E P
Sbjct: 121 VQSRSFRSSSISLLSFRSSQRAEQHP 198
>TC217698 similar to UP|Q89GY6 (Q89GY6) Blr6209 protein, partial (5%)
Length = 865
Score = 196 bits (497), Expect = 3e-50
Identities = 111/206 (53%), Positives = 127/206 (60%), Gaps = 5/206 (2%)
Frame = +2
Query: 287 IPPQQNIGQQQPNIRIDSTSQRFPPQQSYDQASQRYPPQQSYDQASQGYLPKQNYGQAPQ 346
I PQ N GQ SQ +PPQQ+Y SQ Y PQQ+Y QAS Y P+Q YGQAPQ
Sbjct: 35 IXPQXNYGQ---------ASQNYPPQQNYGMTSQNYTPQQNYGQASPNYPPQQKYGQAPQ 187
Query: 347 NY----SAPQAPQNYSQQQTYGPASPQYPPQQSFGPLGEGERRNYAPQQNFGPPGEVDRR 402
NY + QAPQNY QQQ YGP+SPQY QQSFGP G+GERRNY PQQNFG PG
Sbjct: 188 NYPPQQNFDQAPQNYPQQQRYGPSSPQYAQQQSFGPPGQGERRNYMPQQNFGRPG----- 352
Query: 403 NYAPQQNFGPPRQGERRNYVPQQNFGPPGQGE-RGNSVPSEGGWDFKPSYMEEFEQGQKG 461
QGERR+ VP+ G E RG++ DFKP+YME FEQ + G
Sbjct: 353 ------------QGERRDPVPRH-----GASEVRGDTFTPSYAQDFKPAYMEGFEQAKLG 481
Query: 462 NNHAEEQKESQQRFPPPGPGNFTGEV 487
N+ A+EQ SQQR+PP GPG FTGEV
Sbjct: 482 NHPAKEQAGSQQRYPPSGPG-FTGEV 556
Score = 55.1 bits (131), Expect = 7e-08
Identities = 47/172 (27%), Positives = 67/172 (38%), Gaps = 17/172 (9%)
Frame = +2
Query: 242 RQNNQLPNNRGNPSYNNRDSMPR--DGRNYGP-PQNFPPQQNHGQASHIPPQQNIGQQQP 298
+QN + + P N + P + YG PQN+PPQQN QA
Sbjct: 83 QQNYGMTSQNYTPQQNYGQASPNYPPQQKYGQAPQNYPPQQNFDQA-------------- 220
Query: 299 NIRIDSTSQRFPPQQSYDQASQRYPPQQSYDQASQG----YLPKQNYGQAPQNYSAPQAP 354
Q +P QQ Y +S +Y QQS+ QG Y+P+QN+G+ Q P
Sbjct: 221 -------PQNYPQQQRYGPSSPQYAQQQSFGPPGQGERRNYMPQQNFGRPGQGERRDPVP 379
Query: 355 QNYSQQQTYGPASPQYPPQQSFGP----------LGEGERRNYAPQQNFGPP 396
++ + + +P Y Q F P LG + A Q PP
Sbjct: 380 RHGASEVRGDTFTPSY--AQDFKPAYMEGFEQAKLGNHPAKEQAGSQQRYPP 529
Score = 28.9 bits (63), Expect = 5.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 311 PQQSYDQASQRYPP 324
PQQ+Y QASQ YPP
Sbjct: 1 PQQNYGQASQNYPP 42
Score = 28.9 bits (63), Expect = 5.4
Identities = 11/15 (73%), Positives = 12/15 (79%)
Frame = +1
Query: 337 PKQNYGQAPQNYSAP 351
P+QNYGQA QNY P
Sbjct: 1 PQQNYGQASQNYPPP 45
>TC203450 homologue to UP|DAG_ANTMA (Q38732) DAG protein, chloroplast
precursor, partial (53%)
Length = 1196
Score = 146 bits (369), Expect = 2e-35
Identities = 76/153 (49%), Positives = 93/153 (60%)
Frame = +3
Query: 115 DTILFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTT 174
+TI+ GCDYNHWL V +FP+D P E+MI Y +T A L S+EEAKK +YA STTT
Sbjct: 279 ETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLDTLATVLG-SMEEAKKNMYAFSTTT 455
Query: 175 YTGFQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRN 234
YTGFQ + E S+KF+G+PGV++VLPDSYID NK YGGD+YI G+IIP P
Sbjct: 456 YTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCKYPT----- 620
Query: 235 LGGRRDYRQNNQLPNNRGNPSYNNRDSMPRDGR 267
Y+ P N RD P D R
Sbjct: 621 ------YQPKRSAPKNESRRYERRRDGPPPDRR 701
>TC217631 similar to UP|WAIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein
interacting protein (WASP interacting protein) (PRPL-2
protein), partial (7%)
Length = 1440
Score = 145 bits (365), Expect = 5e-35
Identities = 132/437 (30%), Positives = 205/437 (46%), Gaps = 26/437 (5%)
Frame = +1
Query: 21 LSPKPLLSTTTAMASSLILLRRSLRSLSGIHHSFSATATSLSVPITGSIS--SHFSLSKS 78
L+P LS + MA+ IL R ++L+ F + T+ S P ++S S++ +
Sbjct: 37 LNPFHSLSLSPTMATQ-ILSRIFPKTLTLAPFLFRSLTTAPSRPSLPALSFLRRISVAAN 213
Query: 79 PNV-------VDGIQSRSFRSTSISLLSSRYGETSELSPEIGPDTILFEGCDYNHWLFVC 131
P++ +++ S R+T+ SL + S P+ +TIL +GCD+ HWL V
Sbjct: 214 PSLRRVLLPNAPSLRALSTRATTSSL-NDPNPNWSNRPPK---ETILLDGCDFEHWLVVM 381
Query: 132 DFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTTYTGFQAVMTEEESKKFE 191
+ P + P +++I Y +T AK + S EEA+ KIY+ ST Y F A+++EE S K +
Sbjct: 382 EKP-EGDPTRDDIIDSYIKTLAKVIG-SEEEARMKIYSVSTRHYFAFGALVSEELSYKIK 555
Query: 192 GIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGGRRDYRQNNQLPNNR 251
+PGV +VLPDSY++ K YGG+ +I GQ P P ++ +NN N R
Sbjct: 556 ELPGVRWVLPDSYLNVKEKDYGGEPFINGQAAPYDPKY--------HEEWVRNNARANER 711
Query: 252 GNPSYNNRDSMPRD---GRNY-GPPQNFPPQQNHGQASHIPPQQNIGQQQPNIRIDSTSQ 307
N R+ PR+ RN+ +N + G+ P N+G P S +
Sbjct: 712 -----NRRNDRPRNADRSRNFERRRENVVNRDMQGRPPSPNPGPNVGGPPP-----SNAA 861
Query: 308 RFPPQQS--YDQASQRYPPQQS---YDQASQGYLPKQNYGQAPQNYS--APQAPQNYSQQ 360
+PP + Y ++ Y P + Y ++ GY P N G P + + AP + Y+
Sbjct: 862 GYPPSNAAGYPPSNAGYAPPSNTGGYPPSNAGYAPPSNAGGYPPSNAGYAPPSNAGYAPP 1041
Query: 361 QTYGPASPQ----YPPQQ--SFGPLGEGERRNYAPQQNFGPPGEVDRRNYAPQQNFGPPR 414
T G +SP YPP +GP G + NYA GPP + + QQN G
Sbjct: 1042NTAGYSSPNAAGGYPPNAGGGYGPGGGVPQNNYAGNMG-GPPSNQNMGGF--QQNSGWSN 1212
Query: 415 QGERRNYVPQQNFGPPG 431
R+ + GPPG
Sbjct: 1213NAPSRDVPSRDMGGPPG 1263
>TC216839
Length = 1055
Score = 135 bits (339), Expect = 5e-32
Identities = 73/169 (43%), Positives = 108/169 (63%), Gaps = 5/169 (2%)
Frame = +1
Query: 115 DTILFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTT 174
+TIL +GCDY HWL V +FP + KP + M+ Y +T A+ L S E+AK KIY+ ST+T
Sbjct: 253 ETILLDGCDYEHWLIVMEFPDNPKPSEDHMVNAYVKTLAQVLG-SEEDAKNKIYSVSTST 429
Query: 175 YTGFQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRN 234
YTGF A+++EE S K + +PGV++VLPDSY+D NK YGGD +++G++IPRP
Sbjct: 430 YTGFGALISEELSYKVKELPGVLWVLPDSYLDVPNKDYGGDLFVDGKVIPRP-------- 585
Query: 235 LGGRRDYRQNNQLPN-NRGNPSYN-NRDSMP---RDGRNYGPPQNFPPQ 278
YR +++ P+ +R P ++ R++M RD +N+ Q P Q
Sbjct: 586 -----QYRYSDRQPSRSRPRPRHDRRRETMQVERRDQQNWNQGQGGPMQ 717
>TC214189 homologue to UP|Q8L949 (Q8L949) Plastid protein, partial (71%)
Length = 969
Score = 129 bits (324), Expect = 3e-30
Identities = 99/270 (36%), Positives = 132/270 (48%), Gaps = 17/270 (6%)
Frame = +2
Query: 16 PLKTLLSPKPLLSTTTAMASSLILLRRSLRSLSGIHHSFSATAT-SLSVPITGSIS---- 70
P KTL+ L A A S R ++R S + + TA ++++P S+S
Sbjct: 17 PSKTLI----LRHCDMARAVSSSCARLTMRLFSTTTTTTTTTAAFAVTLPKPSSLSVSTR 184
Query: 71 ------SHFSLSKSPNVVDGIQSRSFRS--TSISLLSSRYGETSELSP----EIGPDTIL 118
SH + S V GI+ R R+ ++ S L+S +S S E+ P L
Sbjct: 185 RFLFPLSHAIVPPSTRVA-GIRCRVNRAGDSAYSPLNSASSSSSSFSDRPPTEMAP---L 352
Query: 119 FEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTTYTGF 178
F GCDYNHWL V D P ++MI Y +T AK L S EEAKKKIY S Y GF
Sbjct: 353 FPGCDYNHWLIVMDHPGGEGATKQQMIDCYIQTLAKVLG-SEEEAKKKIYNVSCERYFGF 529
Query: 179 QAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGGR 238
+ EE S K EG+PGV+FVLPDSY+DP NK YG + ++ G+I+ R P
Sbjct: 530 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSP----------E 679
Query: 239 RDYRQNNQLPNNRGNPSYNNRDSMPRDGRN 268
R R Q ++ P YN+R R N
Sbjct: 680 RQRRVEPQPQRHQDRPRYNDRTRYVRRREN 769
>TC203462 homologue to UP|DAG_ANTMA (Q38732) DAG protein, chloroplast
precursor, partial (53%)
Length = 708
Score = 127 bits (318), Expect = 1e-29
Identities = 81/210 (38%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Frame = +1
Query: 43 SLRSLSGIHHSFSATATSLSVPITGSISSHFSLSKSPNVVDGIQSRSFRSTSISLLSSRY 102
S+ +++ + SFSA +L SISS F+ + + I +R+ I
Sbjct: 43 SVPTMATVTFSFSAKTLTLPYHPKTSISS-FAPVTNLRLSHSIVTRTRNCNRIRAALDGD 219
Query: 103 GETSELSPEIGPDTILFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEE 162
+ +TI+ GCDYNHWL V +FP+D P E+MI Y +T A L S+EE
Sbjct: 220 FSAKRSNNNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLDTLATVLG-SMEE 396
Query: 163 AKKKIYACSTTTYTGFQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYG--------- 213
AKK +YA STTTYTGFQ + E S+KF+G+PGV++VLPDSYID NK YG
Sbjct: 397 AKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGFFLISTLI 576
Query: 214 -------------------GDQYIEGQIIP 224
GD+YI G+IIP
Sbjct: 577 DFCSISYSTA*LCCSSLDLGDKYINGEIIP 666
>TC214418 homologue to UP|Q8L949 (Q8L949) Plastid protein, partial (74%)
Length = 1130
Score = 123 bits (309), Expect = 2e-28
Identities = 75/189 (39%), Positives = 97/189 (50%), Gaps = 2/189 (1%)
Frame = +3
Query: 82 VDGIQSRSFRSTSISLLSSRYGETSELSPEIGPDTI--LFEGCDYNHWLFVCDFPRDNKP 139
V GI+ R R+ + G +S + P + LF GCDYNHWL V + P
Sbjct: 18 VAGIRCRVNRAGDSAYSPLNSGSSSSSFSDRPPTEMAPLFPGCDYNHWLIVMENPGGEGA 197
Query: 140 PPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTTYTGFQAVMTEEESKKFEGIPGVIFV 199
++MI Y +T AK L S EEAKKKIY S Y GF + EE S K EG+PGV+FV
Sbjct: 198 NKQQMIDCYIQTLAKVLG-SEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFV 374
Query: 200 LPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGGRRDYRQNNQLPNNRGNPSYNNR 259
LPDSY+DP NK YG + ++ G+I+ R P R R Q ++ P YN+R
Sbjct: 375 LPDSYVDPENKDYGAELFVNGEIVQRSP----------ERQRRVEPQPQRHQDRPRYNDR 524
Query: 260 DSMPRDGRN 268
R N
Sbjct: 525 TRYVRRREN 551
>TC214320 similar to UP|O22793 (O22793) Plastid protein (At2g33430/F4P9.20),
partial (68%)
Length = 1045
Score = 120 bits (300), Expect = 2e-27
Identities = 66/151 (43%), Positives = 82/151 (53%)
Frame = +3
Query: 118 LFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTTYTG 177
LF GCDY+HWL V P ++MI Y +T AK L S EEAKKKIY S Y
Sbjct: 354 LFPGCDYHHWLVVIHKPGGEGATKQQMIDCYVQTLAKVLG-SEEEAKKKIYNVSCERYFA 530
Query: 178 FQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGG 237
F + EE S K EG+PGV+FVLPDSY+DP +K YGG+ ++ G+I+ RPP
Sbjct: 531 FGCDIDEETSNKLEGLPGVLFVLPDSYVDPEHKDYGGELFVNGEIVQRPP---------- 680
Query: 238 RRDYRQNNQLPNNRGNPSYNNRDSMPRDGRN 268
R R Q + P YN+R R N
Sbjct: 681 ERQRRVEPQPQRQQDRPRYNDRTRYVRRREN 773
>AW706156
Length = 424
Score = 95.5 bits (236), Expect = 5e-20
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = +2
Query: 116 TILFEGCDYNHWLFVCDFPR-DNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTT 174
TIL GCDY HWL V + PR + + Y +T A+ L EEAKKKIYA ST+T
Sbjct: 2 TILLNGCDY*HWLIVMESPR*PYTLLGHKWLTSYVKTLAQVLGCE-EEAKKKIYADSTST 178
Query: 175 YTGFQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRP 226
+GF A++++E S K +PGV +VLPDS +D N YGGD +G++IPRP
Sbjct: 179 SSGFGALISDELSYKVTELPGVFWVLPDSCLDDTNYDYGGD*CGDGKVIPRP 334
>TC214263 homologue to UP|Q8L949 (Q8L949) Plastid protein, partial (47%)
Length = 581
Score = 77.4 bits (189), Expect = 1e-14
Identities = 48/132 (36%), Positives = 60/132 (45%), Gaps = 22/132 (16%)
Frame = +2
Query: 159 SVEEAKKKIYACSTTTYTGFQAVMTEEESKKFEG----------------------IPGV 196
S EEAKKKIY S Y GF + EE S K EG +PGV
Sbjct: 11 SEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGMFSEVEVFEISFLCSLFFICVGLPGV 190
Query: 197 IFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGGRRDYRQNNQLPNNRGNPSY 256
+FVLPDSY+DP NK YG + ++ G+I+ R P R R Q ++ P Y
Sbjct: 191 LFVLPDSYVDPENKDYGAELFVNGEIVQRSP----------ERQRRVEPQPQRHQDRPRY 340
Query: 257 NNRDSMPRDGRN 268
N+R R N
Sbjct: 341 NDRTRYVRRREN 376
>TC214115 similar to UP|O22793 (O22793) Plastid protein (At2g33430/F4P9.20),
partial (46%)
Length = 557
Score = 65.5 bits (158), Expect = 5e-11
Identities = 51/155 (32%), Positives = 74/155 (46%), Gaps = 12/155 (7%)
Frame = +3
Query: 55 SATATSLSVPITGSIS----------SHFSLSKSPNVVDGIQSRSFRSTSISLLSSRYGE 104
+ATA ++++P S+S SH + S V GI+ R R+ + G
Sbjct: 99 TATAFAVTLPKPSSLSLSSRRFLFPLSHAIVPPSTRVA-GIRCRVNRAGDSAYSPLNSGS 275
Query: 105 TSELSPEIGPDTI--LFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEE 162
+S + P + LF GCDYNHWL V + P ++MI Y +T AK L S +E
Sbjct: 276 SSSSFSDRPPTEMAPLFPGCDYNHWLIVMENPGGEGANKQQMIDCYIQTLAKVLG-SEDE 452
Query: 163 AKKKIYACSTTTYTGFQAVMTEEESKKFEGIPGVI 197
AK+K Y TY GF + EE +K G+ V+
Sbjct: 453 AKRKTYNSFCDTYCGFGCEIDEETTK*HGGLADVL 557
>TC217699
Length = 462
Score = 62.4 bits (150), Expect = 4e-10
Identities = 29/52 (55%), Positives = 36/52 (68%)
Frame = +3
Query: 435 RGNSVPSEGGWDFKPSYMEEFEQGQKGNNHAEEQKESQQRFPPPGPGNFTGE 486
RG++ DFK +Y EEFEQ + GN+ A+EQ SQQR+PP GPG FTGE
Sbjct: 27 RGDTFTPSYVQDFKSAYKEEFEQAELGNHPAKEQTGSQQRYPPSGPGTFTGE 182
>CD392737
Length = 558
Score = 61.2 bits (147), Expect = 1e-09
Identities = 30/52 (57%), Positives = 37/52 (70%)
Frame = -2
Query: 435 RGNSVPSEGGWDFKPSYMEEFEQGQKGNNHAEEQKESQQRFPPPGPGNFTGE 486
RG++ DFKP+YME FEQ + GN+ A+EQ SQQR+PP GPG FTGE
Sbjct: 536 RGDTCTPSYAQDFKPAYMEGFEQAKLGNHPAKEQAGSQQRYPPSGPG-FTGE 384
>TC204718 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17H15.1
{Arabidopsis thaliana;} , partial (5%)
Length = 1417
Score = 57.8 bits (138), Expect = 1e-08
Identities = 55/184 (29%), Positives = 68/184 (36%), Gaps = 20/184 (10%)
Frame = +2
Query: 323 PPQQSYDQASQGYLPKQNYGQAPQNYSAPQAPQNYSQQQTYGPASPQYPPQQSFGPLGEG 382
PP Q+ GY+ Y PQ Y+ PQ P YPPQ S G
Sbjct: 17 PPAAPMQQSGYGYVQPGAYSGPPQ-YNVPQQPY------------AGYPPQSSGGYSAAN 157
Query: 383 ERRNYAPQQNFGPPGEVDRRNYAPQQNFGPPRQGERRNY--VPQQNFGPPGQGER----- 435
++ APQQ G QQN PP G NY P + PGQG
Sbjct: 158 WDQSTAPQQQSAHAGYDYYSQQQQQQNPAPPSDGTAYNYSQPPSSGYSQPGQGYAQDGYG 337
Query: 436 GNSVPSEGGWDFKPSYMEE---FEQGQKGNNHAEE--------QKESQQRFP--PPGPGN 482
G P + G+ PSY ++ G+N A E Q +S Q P PP G
Sbjct: 338 GYHAPPQSGYGQPPSYDQQQGYSSAASYGSNPAPEGHTANYGSQGDSTQAPPAQPPSQGY 517
Query: 483 FTGE 486
TG+
Sbjct: 518 GTGQ 529
Score = 38.1 bits (87), Expect = 0.009
Identities = 71/286 (24%), Positives = 94/286 (32%), Gaps = 40/286 (13%)
Frame = +2
Query: 213 GGDQYIEGQIIPRPPPVQFGRNLGGRRDYRQNNQLPNNR-GNPSYNNRDSMPRDGRNYGP 271
G D Y + Q P P G + P Y + P+ G YG
Sbjct: 200 GYDYYSQQQQQQNPAPPSDGTAYNYSQPPSSGYSQPGQGYAQDGYGGYHAPPQSG--YGQ 373
Query: 272 PQNFPPQQNHGQA----SHIPPQ---QNIGQQQPNIRIDSTSQRFPPQQSYDQASQRYPP 324
P ++ QQ + A S+ P+ N G Q + + PP Q Y Q P
Sbjct: 374 PPSYDQQQGYSSAASYGSNPAPEGHTANYGSQGDSTQAPPAQ---PPSQGYGTGQQPSPN 544
Query: 325 QQSY-DQASQGY-LPKQN----YGQAP-------QNYSAPQA------PQNYSQQQT--- 362
+Y QA GY +P + YG P Y PQ P Y Q Q+
Sbjct: 545 AANYAPQAQPGYGVPPTSQPATYGSQPPAQSGYGSGYGPPQTQKPSGTPPVYGQSQSPNT 724
Query: 363 ---YGPAS---PQYPPQQSFGPLGEGERRNYAPQQNFGPPGEVDRRNYAPQQNFGPPRQG 416
YG + YPP Q P G + + Q P G A Q +GPP
Sbjct: 725 AGGYGQSGHLQSGYPPSQP--PPSGGYAQPESGSQKAPPSG----YGGAVQPGYGPP--- 877
Query: 417 ERRNYVPQQNFGPPGQGER----GNSVPSEGGWDFKPSYMEEFEQG 458
+Y G PG G+ NS G+ P Y + G
Sbjct: 878 ---SYGGAPAGGQPGYGQAPPSYSNSSYGAAGYAQPPVYSSDGNVG 1006
>TC204721 similar to GB|AAL84954.1|19310435|AY078954 F17H15.1/F17H15.1
{Arabidopsis thaliana;} , partial (30%)
Length = 1762
Score = 57.8 bits (138), Expect = 1e-08
Identities = 75/303 (24%), Positives = 106/303 (34%), Gaps = 19/303 (6%)
Frame = +2
Query: 194 PGVIFVLPDSYIDPV------NKQYGG------DQYIEGQIIPRPPPVQFGRNLGGRRDY 241
PG +V P +Y P + Y G D Y PP Q + GG Y
Sbjct: 590 PGYGYVQPGAYSGPSPQYNMPQQPYAGYPPQQPDGYSTNWDQSTAPPHQQSTHGGGYYYY 769
Query: 242 RQNNQLPNNRGNPSYNNRDSMPRDGRNYGPPQNFPPQQNHGQASHIPPQQNIGQQQPNIR 301
Q Q P N G P + P DG Y Q PP + Q++ QQ Q N
Sbjct: 770 SQQPQQPQNPGGP------APPADGSAYNYSQ--PPSSGYNQSA----QQGYAQDSYNAY 913
Query: 302 IDSTSQRFPPQQSYDQ----ASQRYPPQQSYDQASQGYLPKQNYGQAPQNYSAPQAPQNY 357
+ + +YDQ S+ P Q+ + + Y + + QAP A Q Y
Sbjct: 914 NAQSQSGYGQPPTYDQQQGYGSESNPAQEGH---TANYAVQGDSAQAPSAQPITVAQQGY 1084
Query: 358 SQQQTYGPASPQYPPQQSFGPLGEGERRNYAPQQNFG-PPGEVDRRNYAPQQNFGPPRQG 416
Q + YPPQ + PQ +G PP Q +G Q
Sbjct: 1085PTNQLPSSNTANYPPQGT-------------PQPGYGVPPTSQAAYGNQSQPGYGGAVQ- 1222
Query: 417 ERRNYVPQQNFGPP--GQGERGNSVPSEGGWDFKPSYMEEFEQGQKGNNHAEEQKESQQR 474
Y P Q +G P GQ G ++PS + Y + GN +A+ + + +
Sbjct: 1223--PGYGP-QTYGAPQGGQPGYGQALPSYSNSSYGAGYTQTPAYTGDGNGNAQAPQSAIAK 1393
Query: 475 FPP 477
P
Sbjct: 1394ASP 1402
Score = 35.8 bits (81), Expect = 0.044
Identities = 43/176 (24%), Positives = 63/176 (35%), Gaps = 13/176 (7%)
Frame = +2
Query: 300 IRIDSTSQRFPPQQSYDQASQRYPPQQSYDQASQGYLPKQNYGQAPQNYSAPQAPQNYSQ 359
+R + S +P Q + + P Q GY+ P YS P +PQ
Sbjct: 497 VRNPAMSGGYPQQGYQSRPPSNWAPPAPTQQPGYGYVQ-------PGAYSGP-SPQYNMP 652
Query: 360 QQTYGPASPQYPPQQSFGPLGEGERRNYAPQQNFGPPGEVDRRNYAPQ--QNFG---PPR 414
QQ Y PPQQ G ++ P Q G + PQ QN G PP
Sbjct: 653 QQPYAGY----PPQQPDGYSTNWDQSTAPPHQQSTHGGGYYYYSQQPQQPQNPGGPAPPA 820
Query: 415 QGERRNYVPQQNFGPPGQGERG--------NSVPSEGGWDFKPSYMEEFEQGQKGN 462
G NY + G ++G + S+ G+ P+Y ++ G + N
Sbjct: 821 DGSAYNYSQPPSSGYNQSAQQGYAQDSYNAYNAQSQSGYGQPPTYDQQQGYGSESN 988
>TC214435 similar to UP|O22793 (O22793) Plastid protein (At2g33430/F4P9.20),
partial (25%)
Length = 420
Score = 53.5 bits (127), Expect = 2e-07
Identities = 29/54 (53%), Positives = 33/54 (60%)
Frame = +1
Query: 118 LFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACS 171
LF GCDYNHWL V + P ++MI Y +T AK L S EEAKKKIY S
Sbjct: 262 LFPGCDYNHWLIVMENPGGEGANKQQMIDCYIQTLAKVLG-SEEEAKKKIYNVS 420
>TC222125
Length = 193
Score = 52.4 bits (124), Expect = 5e-07
Identities = 35/65 (53%), Positives = 42/65 (63%)
Frame = +2
Query: 30 TTAMASSLILLRRSLRSLSGIHHSFSATATSLSVPITGSISSHFSLSKSPNVVDGIQSRS 89
T MASSLI LRR++R+LSG+ SFS A S SVPI +S +SL VV Q RS
Sbjct: 14 TLRMASSLIHLRRTVRALSGVAQSFSVHAASYSVPIRCGVS--WSLQSPKGVV---QPRS 178
Query: 90 FRSTS 94
FRS+S
Sbjct: 179FRSSS 193
>TC223403
Length = 424
Score = 50.1 bits (118), Expect = 2e-06
Identities = 21/45 (46%), Positives = 29/45 (63%)
Frame = +2
Query: 115 DTILFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNIS 159
+TIL +GCDY HWL V +FP + KP + M+ Y +T A+ L S
Sbjct: 221 ETILLDGCDYEHWLIVMEFPDNPKPSEDHMVNSYVKTLAQVLGRS 355
>TC233960 similar to UP|OPSD_SEPOF (O16005) Rhodopsin, partial (10%)
Length = 862
Score = 50.1 bits (118), Expect = 2e-06
Identities = 57/195 (29%), Positives = 74/195 (37%), Gaps = 20/195 (10%)
Frame = +2
Query: 223 IPRPPPVQFGRNL-GGRRDYRQNNQLPNNR-------GNPSYNNRDSMPRDGRNYGPP-- 272
+P P ++ +L GG+ QN +L + G+P N +D YG P
Sbjct: 353 VPHNQPREYDVHLTGGQSGKPQNGRLKFSLQWIGGAGGHPQANQKDL------GYGAPYG 514
Query: 273 ------QNFPPQQNHGQASHIPPQQNIGQQQPNIRIDSTSQRFPPQQSYDQASQRYPPQQ 326
+PPQ + + P G Q P +PPQ Y A Q Y Q
Sbjct: 515 SQAPYGSGYPPQGGYPPQGYPAPY---GSQAPY------GSGYPPQGGYPPADQ-YGSQA 664
Query: 327 SYDQASQGYLPKQNYGQAPQNYSAPQA-PQNYSQQQTYGPASPQYPPQQSFG---PLGEG 382
Y GY P+ Y PQ Y +PQA Y Q Y P YPP +G P G G
Sbjct: 665 PY---GSGYPPQGGY--PPQGYPSPQAYGSGYPPQGGY-PPQGGYPPADQYGSQAPYGSG 826
Query: 383 ERRNYAPQQNFGPPG 397
Y PQ + P G
Sbjct: 827 ----YPPQGGYPPQG 859
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,763,563
Number of Sequences: 63676
Number of extensions: 423652
Number of successful extensions: 2545
Number of sequences better than 10.0: 171
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2345
length of query: 488
length of database: 12,639,632
effective HSP length: 101
effective length of query: 387
effective length of database: 6,208,356
effective search space: 2402633772
effective search space used: 2402633772
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC134322.18