BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134322.1 + phase: 0 /pseudo
(413 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC222557 59 8e-17
TC221865 81 8e-16
TC213061 80 2e-15
CA851073 79 3e-15
TC233392 76 2e-14
CO986021 76 3e-14
TC231922 75 5e-14
TC231841 74 2e-13
CO979823 68 9e-12
CO984521 67 1e-11
BI974689 65 4e-11
TC211809 64 2e-10
TC233956 62 5e-10
BE610670 60 1e-09
BM527030 59 3e-09
BG404993 58 7e-09
TC232330 UP|Q6ILA4 (Q6ILA4) HDC09939, partial (5%) 56 3e-08
TC222789 55 8e-08
AW595917 54 1e-07
BQ453949 53 3e-07
>TC222557
Length = 1002
Score = 58.9 bits (141), Expect(2) = 8e-17
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Frame = +1
Query: 131 QHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPT-NCESCGADHEDLNHLLFECP 189
+ +W LK+ K W + + +PT L + V C C E+ +HL F CP
Sbjct: 433 EDLWQLKIPLKATTFAWRLIKERIPTKGNLWRRRVQLNNLMCPFCNRQEEEASHLFFNCP 612
Query: 190 FSIHVWNSAGIWHD---VQHAAIHSDSAANTIFSILQNLSRNIKQRFAATCWSLWKHRNL 246
+ +W + W V + +T+ S ++L K + A WS+W+HRN
Sbjct: 613 RILPLWWESLAWTKTVGVFSPIPRQNYMQHTLISKGKHLQARWKCWWVALTWSIWRHRNR 792
Query: 247 KIWENVDENSVQVVDRARNLIADW 270
++ N N +++D A L+ W
Sbjct: 793 IVFLNKAFNGSKLMDDAIFLVWSW 864
Score = 45.8 bits (107), Expect(2) = 8e-17
Identities = 33/115 (28%), Positives = 46/115 (39%), Gaps = 10/115 (8%)
Frame = +3
Query: 16 WSIGSGATIPILDTPWLANGESINGNIPGGSYIHD-----FTVQNLLSQHGKSWNEPLVQ 70
W +G G I + WL E + P I V S + W +
Sbjct: 69 WKVGCGDKIRFWEDCWLMEQEPLRAKYPRLYNISCQQQKLILVMGFHSANVWEWKLEWRR 248
Query: 71 QMFSNDIAEAI-----LHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELID 120
+F N++ A + D+ T DC VWK E NG +S RSAYR+ +E D
Sbjct: 249 HLFDNEVQAAASFLDDISWGHIDRWTLDCWVWKPEPNGQFSTRSAYRMLLEGAAD 413
>TC221865
Length = 1045
Score = 81.3 bits (199), Expect = 8e-16
Identities = 74/276 (26%), Positives = 108/276 (38%), Gaps = 21/276 (7%)
Frame = -3
Query: 16 WSIGSGATIPILDTPWLANGESINGNIPGGSYIHDFTVQNLLSQHGK----------SWN 65
W +G G + + GE++ P Y Q L+ Q G W
Sbjct: 929 WKVGCGDKFRFWEDKLVGEGETLMRKYPR-MYQISCQQQQLIQQVGSHTETTWEWKFQWR 753
Query: 66 EPLVQQMFSNDIA--EAILHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSH 123
PL I E I P++ +T DC VWK+E NG YS RSAY L E +
Sbjct: 752 RPLFDNEVDTTIGFLEDISRFPIHRHLT-DCWVWKSEPNGHYSTRSAYHLMQHE---AAK 585
Query: 124 LRRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSC-PTNCESCGADHEDLN 182
++ IW LK+ K + + LPT L+ + V T C C E+ +
Sbjct: 584 ANTDPAFEEIWKLKIPAKAAIFA*RLVKDRLPTKNNLRRRQVQLNGTLCLFCRNYEEEAS 405
Query: 183 HLLFECPFSIHVWNSAGIWHDVQHAAIHSDSAANTIFSILQNL--SRNIKQRFAATCW-- 238
HL F C + VW W + +AN LQ+ +KQ CW
Sbjct: 404 HLFFSCTKTQPVW-----WESLSWINTSGAFSANPRHHFLQHSFGLLGLKQYNR*KCWWV 240
Query: 239 ----SLWKHRNLKIWENVDENSVQVVDRARNLIADW 270
++W+HRN I+ N N ++++ A L+ W
Sbjct: 239 ALTFTIWQHRNRTIFSNEPFNGSKMMEDAMFLVWSW 132
>TC213061
Length = 823
Score = 80.1 bits (196), Expect = 2e-15
Identities = 57/184 (30%), Positives = 84/184 (44%), Gaps = 6/184 (3%)
Frame = +2
Query: 93 DCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRG 152
D VW AE +G Y RSAYR+ E + + R ++ +W LKV KV W + +
Sbjct: 128 DQWVWAAESSGSYLARSAYRVIREGIPEEEQDRE---FKELWKLKVPMKVTMFAWRLLKD 298
Query: 153 CLPT*VRLQDKGVSCPTN-CESCGADHEDLNHLLFECPFSIHVWNSAGIWHDV-----QH 206
LPT L+ K V C C + E +HL F C + +W + W + H
Sbjct: 299 ILPTRDNLRRKRVELHEYVCPLCRSMDESASHLFFHCSKILPIWWESLSWVKLVGAFPHH 478
Query: 207 AAIHSDSAANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARNL 266
H ++ ++ LQ K + A W++WKHRN I+ N N+ +V+D A L
Sbjct: 479 PRHHFHQHSHEVYQGLQG--NRWKWWWLALTWTIWKHRNDIIFSNATFNAHKVMDDAVFL 652
Query: 267 IADW 270
I W
Sbjct: 653 IWTW 664
>CA851073
Length = 633
Score = 79.3 bits (194), Expect = 3e-15
Identities = 54/182 (29%), Positives = 84/182 (45%), Gaps = 4/182 (2%)
Frame = +1
Query: 93 DCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRG 152
D +VWKA+ G YS +SAYR+ + H+ ++ IW LK+ P+ W + +
Sbjct: 28 DTMVWKADPCGVYSTKSAYRIL---MTCNRHVSEANIFKTIWKLKIPPRAAVFSWRLIKD 198
Query: 153 CLPT*VRLQDKGVSCPTN-CESCGADHEDLNHLLFECPFSIHVWNSAGIWHDVQHAAIHS 211
LPT L + VS N C CG + E+ +HL F C + +W + W+ + S
Sbjct: 199 RLPTRHNLLRRNVSIQENECPLCGYEQEEADHLFFNCKMTRGLWWESMRWNQIVGPLSVS 378
Query: 212 DSAANTIFSILQNLSRNIKQ---RFAATCWSLWKHRNLKIWENVDENSVQVVDRARNLIA 268
++ F RN + + A S+WKHRNL I++ +V+D A L
Sbjct: 379 PASHFVQFCDGFGAGRNHTRWCGWWIALTSSIWKHRNLLIFQGNQFEPSKVMDDALFLAW 558
Query: 269 DW 270
W
Sbjct: 559 SW 564
>TC233392
Length = 1145
Score = 76.3 bits (186), Expect = 2e-14
Identities = 60/206 (29%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Frame = -1
Query: 83 HTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKV 142
H + QV D VWK E N YS RSAY+L L + G Q +W LK+ K
Sbjct: 683 HAQIQQQVP-DTWVWKHEPNELYSTRSAYKLLQGHLEGED---QDGALQDLWKLKIPAKA 516
Query: 143 KNLLWCMCRGCLPT*VRLQDKGVSCPTN-CESCGADHEDLNHLLFECPFSIHVWNSAGIW 201
W + R LPT L + V + C C ED +H+ EC +W + W
Sbjct: 515 SIFAWRLIRDRLPTKSNLHRRQVVLEDSLCPFCRIREEDASHIFLECNKIRPLWWESQTW 336
Query: 202 -------------HDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKI 248
H +QH +H + K + A WSLWKHRN I
Sbjct: 335 VRSLGVSPINKRQHFLQH--VHGTPGSKRY--------NRWKTWWIALTWSLWKHRNQVI 186
Query: 249 WENVDENSVQVVDRARNLIADWEEAI 274
++N N +++++ A L W A+
Sbjct: 185 FQNAQFNGIKLLEDAVFLHWTWIRAM 108
>CO986021
Length = 900
Score = 75.9 bits (185), Expect = 3e-14
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Frame = -1
Query: 73 FSNDIAEAILHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPG---- 128
F +DI+ +H L D ++WKA+ G YS +SAYRL + RPG
Sbjct: 828 FMDDISAISIHQQLQDS-----MLWKADPTGIYSTKSAYRLLLPN-------NRPGQHSS 685
Query: 129 NWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSC-PTNCESCGADHEDLNHLLFE 187
N++ +W LK+ P+ + W + R L L + V+ C CG E+ HL F
Sbjct: 684 NFKILWKLKIPPRAELFSWRLFRDRLSIRANLLRRHVALQDIMCPLCGNHQEEAGHLFFH 505
Query: 188 CPFSIHVWNSAGIWHDVQHAAIHSDSAANTIFSILQNLSRNIKQR---FAATCWSLWKHR 244
C +I +W + W A + +A FS RN +R + A ++W+HR
Sbjct: 504 CRMTIGLWWESMNWTRTLGAFLDDPAAHFIQFSDGFGAQRNHNRRCLWWIALTSTIWQHR 325
Query: 245 NLKIWENVDENSVQVVDRA 263
N +++ +V+D A
Sbjct: 324 NSLLFKGTPFQPPKVMDDA 268
>TC231922
Length = 803
Score = 75.1 bits (183), Expect = 5e-14
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 16/228 (7%)
Frame = -3
Query: 16 WSIGSGATIPILDTPWLANGESINGNIPGGSYIH---DFTVQNL--LSQHGKSWNEPLVQ 70
W +G G I WL+ G ++ I + T+ + SQ+ +SW +
Sbjct: 705 WRVGCGDKIKFWQDSWLSEGCNLQQKYNQLYTISRQ*NLTISKMGKFSQNARSWEFKWRR 526
Query: 71 QMFSNDIAEAI-----LHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLR 125
++F + A A+ + +D + WKA+ +G YS +SAYRL + + R
Sbjct: 525 RLFDYEYAMAVDFMNEISGISIQNQAHDSMFWKADSSGVYSTKSAYRLLMPSISPAPSRR 346
Query: 126 RPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSC-PTNCESCGADHEDLNHL 184
+Q +W+LK+ P+ W + LPT L + + C CG HE+ HL
Sbjct: 345 ---IFQILWHLKIPPRAAVFSWRLFLDRLPTRGNLSRRSIPIQDIMCPLCGCQHEEAGHL 175
Query: 185 LFECPFSIHVWNSAGIWHDVQHAAIHSDSAANTI-----FSILQNLSR 227
F C + +W + W V A+ +D A++ I F+ N SR
Sbjct: 174 FFHCKMTKGLWWESMRWIRV-IGALPADPASHFIQFCDGFAATSNHSR 34
>TC231841
Length = 791
Score = 73.6 bits (179), Expect = 2e-13
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Frame = +3
Query: 93 DCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRG 152
D VWKA+ +G Y+ +SAY + E+ + ++ G ++ +W LK+ K+ W + R
Sbjct: 63 DQWVWKADPSGQYTAKSAYGVLWGEMFEE---QQDGVFEELWKLKLPSKITIFAWRLIRD 233
Query: 153 CLPT*VRLQDKGVSCPT-NCESCGADHEDLNHLLFECPFSIHVWNSAGIW---------H 202
LPT L+ K + C C + E HL F C VW + W H
Sbjct: 234 RLPTRSNLRRKQIEVDDPRCPFCRSAEESAAHLFFHCSRIAPVWWESLSWVNLLGVFPNH 413
Query: 203 DVQHAAIHSDSAANTIFSILQNL-SRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVD 261
QH H I+ + + + K + A W++WK RN I+ N N+ +++D
Sbjct: 414 PRQHFLQH-------IYGVTAGMRASRWKWWWLALTWTIWKQRNNMIFSNGTFNANKILD 572
Query: 262 RARNLIADW 270
A LI W
Sbjct: 573 EAIFLIWTW 599
>CO979823
Length = 853
Score = 67.8 bits (164), Expect = 9e-12
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 4/214 (1%)
Frame = -2
Query: 65 NEPLVQQMFSNDIAEAILHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHL 124
+E + F +I + +H D+ +WK E G YS +S Y + EL +
Sbjct: 771 SEIAMADSFLGEITQQQIHPQREDK-----WLWKPEPGGHYSTKSGYHVLWGELTEEI-- 613
Query: 125 RRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPTN-CESCGADHEDLNH 183
+ ++ IW LK+ K W + R LPT L+ + V C C E H
Sbjct: 612 -QDADFAEIWKLKIPTKAAVFAWRLVRDRLPTKSNLRRRQVMVQDMVCPLCNNIEEGAAH 436
Query: 184 LLFECPFSIHVWNSAGIWHDVQHAAIHSDSAANTIFS--ILQNL-SRNIKQRFAATCWSL 240
L F C ++ +W + W +++ A + + I L S+ K + A W++
Sbjct: 435 LFFNCTKTLPLWWESMSWVNLKTAMPQTPRQHFLQYGTDIADGLKSKRWKCWWIALTWTI 256
Query: 241 WKHRNLKIWENVDENSVQVVDRARNLIADWEEAI 274
W+HRN +++N + +V++ A L+ W +A+
Sbjct: 255 WQHRNKVVFQNATFHGNKVLEDALLLLWSWFKAL 154
>CO984521
Length = 716
Score = 67.4 bits (163), Expect = 1e-11
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Frame = -2
Query: 97 WKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT 156
W AE +GCYS +SAY+ + + G ++ +W L+V KV W + + LPT
Sbjct: 634 WAAEPSGCYSTKSAYKALHHVTVGEE---QDGKFKELWKLRVPLKVAIFAWRLIQDKLPT 464
Query: 157 *VRLQDKGVSCPTN-CESCGADHEDLNHLLFECPFSIHVWNSAGIWHDVQHAAIHSDSA- 214
L+ K V C C + E +HL F C +W + W ++ +
Sbjct: 463 KANLRKKRVELQEYLCPLCRSVEETASHLFFHCSKVSPLWWESQSWVNMMGVFPYQPDQH 284
Query: 215 -ANTIFSILQNLS-RNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARNLIADW 270
+ IF L + + + A +S+WKHRN I+ N + ++ +++D A ++ W
Sbjct: 283 FSQHIFGASVGLQGKRWQWWWFALTYSIWKHRNSIIFSNANFDAHKLMDDAVFILWTW 110
>BI974689
Length = 409
Score = 65.5 bits (158), Expect = 4e-11
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = -1
Query: 124 LRRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPTNCESCGADHEDLN- 182
+R GNW+ IW LKV PKVK+L+ + R CLP+ VRL KGV CP+ C C + E L+
Sbjct: 406 VRLQGNWKKIWALKVPPKVKHLIRRIQRDCLPSRVRLHAKGVQCPSTCAFCHNNLESLDV 227
Query: 183 HLLFEC 188
++ F+C
Sbjct: 226 NM*FQC 209
Score = 42.4 bits (98), Expect = 4e-04
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = -3
Query: 185 LFECPFSIHVWNSAGIWHDVQHAAIHSDSAANTIFSILQNLSRNIKQRF---AATCWSLW 241
+F C + VW ++G+W +Q +++ IF ++ L N+ Q + A ++W
Sbjct: 239 IFGCEHVVSVWMASGLWPKIQQQVHNAEVIQQLIFPLMDAL--NLDQDYNK*AIILRTIW 66
Query: 242 KHRNLKIWENVDENSVQVV 260
+ +N K+WE+V+ V +
Sbjct: 65 RRQNEKVWEDVETAPVMAM 9
>TC211809
Length = 895
Score = 63.5 bits (153), Expect = 2e-10
Identities = 49/178 (27%), Positives = 77/178 (42%), Gaps = 10/178 (5%)
Frame = +2
Query: 103 GCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQD 162
G YS +SAYRL +E + R + +W LK+ K W + + LPT L+
Sbjct: 200 GNYSTKSAYRLLMEATGEFPVDR---TYVDLWNLKIPSKAIVFAWRLIKDRLPTWTNLRV 370
Query: 163 KGVSC-PTNCESCGADHEDLNHLLFECPFSIHVW-------NSAGIW--HDVQHAAIHSD 212
+ V + C C + ED HL F C + +W NS G + + H H +
Sbjct: 371 RQVELNDSRCPLCNSSEEDAAHLFFHCTKTEXLWWETQSWVNSLGAFPHNPKDHFLQHDN 550
Query: 213 SAANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVVDRARNLIADW 270
+A + +R K + A W +WKHRN ++ N + +V++ A L W
Sbjct: 551 RSAGGV------XARRWKCLWVALTWVIWKHRNGVVFHNHSFDGSKVMEDAILLTWSW 706
>TC233956
Length = 757
Score = 62.0 bits (149), Expect = 5e-10
Identities = 49/190 (25%), Positives = 83/190 (42%), Gaps = 11/190 (5%)
Frame = +2
Query: 92 NDCLVWKAERNGCYSVRSAYRLYVEELIDV-SHLRRPGNWQHIWYLKVSPKVKNLLWCMC 150
ND VW+AE G S +SAY++ EL D HL ++ +W +KV PK + +W +
Sbjct: 56 NDTWVWRAESTGIISTKSAYQVIKSELDDEGQHL----GFKKLWEIKVPPKALSFVWRLL 223
Query: 151 RGCLPT*VRLQDKGVSCPTN-CESCGADHEDLNHLLFECPFSIHVWNSAGIW-------- 201
LPT L + + + C C + E +HL F C + +W W
Sbjct: 224 WDRLPTKDNLIKRQIQVEDDLCPFCHSQSETASHLFFTCGKIMPLWWEFLSWVKEDKVFH 403
Query: 202 -HDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAATCWSLWKHRNLKIWENVDENSVQVV 260
+ + H SAA+ + + + + + A S+W+ RN I++N + ++
Sbjct: 404 CRPMDNFLQHYSSAASKVSNTRRTM------WWIAVTNSIWRLRNDIIFQNQTVDITRLT 565
Query: 261 DRARNLIADW 270
D L+ W
Sbjct: 566 DSTLFLLWTW 595
>BE610670
Length = 368
Score = 60.5 bits (145), Expect = 1e-09
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = -2
Query: 73 FSNDIAEAILHTPLYDQVTNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQH 132
F +DI + +H D L+W+A+ +G YS +SAY L E S +
Sbjct: 358 FMDDIDDVQIHLSSLDS-----LIWRADPSGAYSTKSAYNLLKGE---GSFDNEDSASKI 203
Query: 133 IWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPT-NCESCGADHEDLNHLLFECPFS 191
IW LK+ P+ W + + LPT L+ + V P+ C C + E++ H++F C +
Sbjct: 202 IWNLKIPPRTIAFSWRIFKNRLPTKANLRRRQVELPSYRCPLCDLEEENVGHIMFSCTRT 23
Query: 192 IHVW 195
+W
Sbjct: 22 RSLW 11
>BM527030
Length = 421
Score = 59.3 bits (142), Expect = 3e-09
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 93 DCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRG 152
D LVWK CY VR Y +E V L ++ IW L + V W + +
Sbjct: 90 DSLVWKLALTECYFVRDPYLFLIENTNPVYVLF----YRSIWMLAIPHNVAIFEWKLSKD 257
Query: 153 CLPT*VRLQDKGVSCPTN---CESCGADHEDLNHLLFECPFSIHVWNSAGIW 201
LPT LQ + + C C ED +HL+F C FS +W + W
Sbjct: 258 KLPTRKNLQCRNILLEEQHQLCPFCSGKEEDSSHLIFTCSFSYQIWQNCYKW 413
>BG404993
Length = 412
Score = 58.2 bits (139), Expect = 7e-09
Identities = 34/110 (30%), Positives = 50/110 (44%), Gaps = 1/110 (0%)
Frame = -3
Query: 93 DCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMCRG 152
D WKA+ +G YS ++AY L E + + G + +W LK+ PK W +
Sbjct: 332 DSWTWKADPSGNYSTKTAYELLQEAIRGDNE---DGIFVQLWKLKIPPKAPVFTWRLIND 162
Query: 153 CLPT*VRLQDKGVSCPTN-CESCGADHEDLNHLLFECPFSIHVWNSAGIW 201
LPT V L+ + V + C C ED HL F C ++ W + W
Sbjct: 161 RLPTKVNLRRRQVEISDSLCPLCNNSEEDAAHLFFNCNKTLPFWWESLSW 12
>TC232330 UP|Q6ILA4 (Q6ILA4) HDC09939, partial (5%)
Length = 434
Score = 55.8 bits (133), Expect = 3e-08
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +2
Query: 326 WTPPSSGRFKCNVDAAFSAQFQRTGIGVCIRDDS*TFVLAKVLQFDQLFPVAIGEALGLY 385
W P +G K ++DA +F + G+G+ IR D TFV K L D + +A+GL
Sbjct: 38 WLKPPTGSLKLSIDAMLFKEFNKFGVGIFIRGDQGTFVSVKTLLLDGIPEPGEAKAIGLL 217
Query: 386 HAMQWMQDMYF 396
HA+ W Q++ +
Sbjct: 218 HALIWAQELVY 250
>TC222789
Length = 954
Score = 54.7 bits (130), Expect = 8e-08
Identities = 40/155 (25%), Positives = 64/155 (40%), Gaps = 14/155 (9%)
Frame = +2
Query: 130 WQHIWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVS-CPTNCESCGADHEDLNHLLFEC 188
++ +W LKV K + W + R LPT V L + + +C C ED HL F C
Sbjct: 353 FEKLWKLKVPIKYEVFAWRLLRDRLPTKVNLHRRQIQVMDRSCPFCRNVEEDAGHLFFHC 532
Query: 189 PFSIHVWNSAGIW-------------HDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAA 235
I +W + W H +QH I + T + K + A
Sbjct: 533 SKIIPIWWESLSWVNISGALPKDPRQHFLQHDLIMAGGIRTTRW----------KCWWLA 682
Query: 236 TCWSLWKHRNLKIWENVDENSVQVVDRARNLIADW 270
W++W+ RN I+ N ++ +++D A L+ W
Sbjct: 683 VTWTIWQQRNKIIFFNDSFDANKLIDEAAFLLWTW 787
>AW595917
Length = 404
Score = 54.3 bits (129), Expect = 1e-07
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Frame = +1
Query: 133 IWYLKVSPKVKNLLWCMCRGCLPT*VRLQDKGVSCPTNCESCGADHEDLNHLLFECPFSI 192
+W LK+ PK W + + LPT L+ + + C C ED HL F C ++
Sbjct: 7 LWKLKIPPKAAVFTWRLIKDQLPTKANLRRQMEISDSLCPLCNNSKEDATHLFFNCSKTL 186
Query: 193 HVWNSAGIWHDVQHAAIHSDSAANTIFSILQNLSRNIKQRFAA--TCW------SLWKHR 244
W W + + LQ+ S N A CW ++W+HR
Sbjct: 187 PFW-----WESLSWVKTVGAFPKDLREHFLQHNSGNTAGTKATR*RCWWIALTRTIWQHR 351
Query: 245 NLKIWENVDENSVQVVD 261
N ++EN N+ +V+D
Sbjct: 352 NKLVFENQTFNASKVMD 402
>BQ453949
Length = 450
Score = 52.8 bits (125), Expect = 3e-07
Identities = 30/106 (28%), Positives = 52/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 91 TNDCLVWKAERNGCYSVRSAYRLYVEELIDVSHLRRPGNWQHIWYLKVSPKVKNLLWCMC 150
+ D L+W + +G YS +SAY E S +++IW LK+ P+ +
Sbjct: 24 SRDLLLWGSNSDGSYSTKSAYNFLKNE---DSQTIEDSAFKNIWNLKLPPRACAFS*RIF 194
Query: 151 RGCLPT*VRLQDKGVSCPT-NCESCGADHEDLNHLLFECPFSIHVW 195
+PT V L+ + V P+ NC C + E + H+++ C + H+W
Sbjct: 195 *NRIPTKVNLRRRHVKLPSSNCPLCDEEEETVGHVMYSCIKTRHLW 332
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.326 0.138 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,217,309
Number of Sequences: 63676
Number of extensions: 390179
Number of successful extensions: 3160
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 3043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3099
length of query: 413
length of database: 12,639,632
effective HSP length: 100
effective length of query: 313
effective length of database: 6,272,032
effective search space: 1963146016
effective search space used: 1963146016
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC134322.1