BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133780.10 - phase: 0
(172 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC234499 weakly similar to UP|Q94A53 (Q94A53) At1g12830/F13K23_6... 140 2e-34
TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Pro... 59 9e-10
TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {A... 59 9e-10
TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 57 6e-09
TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 56 1e-08
TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 55 1e-08
BE822052 similar to GP|4557063|gb|A expressed protein {Arabidops... 54 4e-08
TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g4... 54 4e-08
TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%) 51 2e-07
TC203635 similar to PIR|T46225|T46225 alpha NAC-like protein - A... 50 5e-07
TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%) 50 7e-07
TC219510 UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase HD2-P3... 48 2e-06
TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 47 3e-06
TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C2... 46 1e-05
TC219508 homologue to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deace... 44 3e-05
TC204249 UP|Q9SB11 (Q9SB11) Glycinin, complete 44 3e-05
TC218783 similar to UP|Q40363 (Q40363) NuM1 protein, partial (19%) 43 6e-05
TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacety... 42 1e-04
TC206429 similar to UP|Q9LFQ3 (Q9LFQ3) Transcriptional regulator... 41 2e-04
CF922292 41 3e-04
>TC234499 weakly similar to UP|Q94A53 (Q94A53) At1g12830/F13K23_6, partial
(26%)
Length = 894
Score = 140 bits (354), Expect = 2e-34
Identities = 83/163 (50%), Positives = 97/163 (58%), Gaps = 1/163 (0%)
Frame = +1
Query: 10 EEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDD 69
+EPT P+ ++ + LP+K PKL D N++ + D
Sbjct: 163 QEPTLPSSKRKSDLDLQDLPSKIPKL--------------------DLKENDDKDLQNDH 282
Query: 70 DDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDD-SDDDSDGNV 128
+ E+DE EE DRKGKGIMRDDKGKGKMI EE+EDDDD DDSDD D D DG
Sbjct: 283 EGENDEREE--------DRKGKGIMRDDKGKGKMILEEEEDDDDDDDSDDGGDSDDDG-- 432
Query: 129 SGSDSDFSDDPLAEVDLDNILPSRTRRRTAQSGVRISGGTPNA 171
SDFSDDPL EVDL+NILPSRTR RTA SGVRI G + NA
Sbjct: 433 ----SDFSDDPLMEVDLNNILPSRTRGRTASSGVRIDGDSGNA 549
>TC230134 weakly similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23),
partial (8%)
Length = 581
Score = 59.3 bits (142), Expect = 9e-10
Identities = 34/111 (30%), Positives = 56/111 (49%), Gaps = 4/111 (3%)
Frame = +2
Query: 32 NPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDD----EDDEDEENSDEEPVVD 87
+P + +DQ + T + DA ++ E++ DDDD ED +D++ DE+ D
Sbjct: 194 SPMVDGRFPLDQPCKGKHTSEENKDA---SDTEDDDDDDDVNDGEDGDDDDEDDEDFSGD 364
Query: 88 RKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
G+ DD + E D+DD+D DD DD +D+ DG+ D + D+
Sbjct: 365 DGGEEADSDDDPEANGGGESDDDDEDDDDDDDDNDEDDGDEDDDDEEDEDE 517
Score = 53.5 bits (127), Expect = 5e-08
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +2
Query: 29 PNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDED---DEDEENSDEEPV 85
P P T+ + + T + D V + E ++ D+DDED D+ E +D +
Sbjct: 218 PLDQPCKGKHTSEENKDASDTEDDDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDD 397
Query: 86 VDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDP 139
+ G G DD +E+D+DDDD +D DD D+D D + + + P
Sbjct: 398 PEANGGGESDDD-------DEDDDDDDDDNDEDDGDEDDDDEEDEDEDEETPQP 538
Score = 52.4 bits (124), Expect = 1e-07
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Frame = +2
Query: 61 NEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDD-------- 112
N+ ++T+DDD DD+D + ++ D + DD G EE D DDD
Sbjct: 260 NKDASDTEDDD-DDDDVNDGEDGDDDDEDDEDFSGDDGG-----EEADSDDDPEANGGGE 421
Query: 113 -DSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRR 156
D DD DD DDD D + D D D+ + D + P +R+
Sbjct: 422 SDDDDEDDDDDDDDNDEDDGDEDDDDEEDEDEDEETPQPPSKKRK 556
Score = 43.9 bits (102), Expect = 4e-05
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +2
Query: 86 VDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD------GNVSGSDSDFSDDP 139
+D+ KG ++ K E+D+DDDD +D +D DDD + G+ G ++D DDP
Sbjct: 221 LDQPCKGKHTSEENKDASDTEDDDDDDDVNDGEDGDDDDEDDEDFSGDDGGEEADSDDDP 400
Query: 140 LA 141
A
Sbjct: 401 EA 406
>TC232838 similar to GB|AAP21377.1|30102918|BT006569 At1g47970 {Arabidopsis
thaliana;} , partial (46%)
Length = 902
Score = 59.3 bits (142), Expect = 9e-10
Identities = 31/100 (31%), Positives = 52/100 (52%)
Frame = +2
Query: 41 VDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGK 100
V+++ E +V+ D ++E E DDDDE D++++ D+ P D DD+ +
Sbjct: 278 VEEDDEEYESVDEVVDDAEDDEDEEEDDDDDEGDDNDDEEDDAP--DGGDDDDDEDDEEE 451
Query: 101 GKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPL 140
G + + DDDD+D DDSDDD D + + ++ L
Sbjct: 452 GDVQRGGEPDDDDNDSDDDSDDDEDEDEEDEEEQGEEEDL 571
Score = 49.7 bits (117), Expect = 7e-07
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = +2
Query: 43 QETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGK 102
+E E+ V + E + DD EDDEDEE D+ DD+G
Sbjct: 254 EENEVKVLVEEDDEEY---ESVDEVVDDAEDDEDEEEDDD-------------DDEGDDN 385
Query: 103 MIEEED-----EDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLD 146
EE+D +DDDD DD ++ D G D+D DD + D D
Sbjct: 386 DDEEDDAPDGGDDDDDEDDEEEGDVQRGGEPDDDDNDSDDDSDDDEDED 532
Score = 45.4 bits (106), Expect = 1e-05
Identities = 40/146 (27%), Positives = 56/146 (37%), Gaps = 22/146 (15%)
Frame = +2
Query: 3 EPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNE 62
E + N+ EE P D +E D E E D N+
Sbjct: 371 EGDDNDDEEDDAPDGGDDDDDE-----------------DDEEEGDVQRGGEPDDDDNDS 499
Query: 63 PENNTDDDDEDDEDEENSDEE----------PVVDRKGKGIMRD-DKGKGKMIEEEDEDD 111
+++ DD+DED+EDEE EE P+ + + D + + EEED DD
Sbjct: 500 DDDSDDDEDEDEEDEEEQGEEEDLGTEYLIRPLETAEEEEASSDFEPEENGEEEEEDVDD 679
Query: 112 DDSD-----------DSDDSDDDSDG 126
+D + D DDSDDD G
Sbjct: 680 EDCEKAEAPPKRKRSDKDDSDDDDGG 757
>TC230133 weakly similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 850
Score = 56.6 bits (135), Expect = 6e-09
Identities = 29/89 (32%), Positives = 45/89 (49%), Gaps = 3/89 (3%)
Frame = +3
Query: 40 TVDQETELPTTVNSSSDAVPNNEPENNTDDDDED---DEDEENSDEEPVVDRKGKGIMRD 96
T ++ + T + D N+ ++N D++DED D+ E +D + + G G D
Sbjct: 252 TSEENKDASDTEDDDDDDNVNDGEDDNDDEEDEDFSGDDGGEEADSDDDPEANGGGGSDD 431
Query: 97 DKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
D G ++ DEDD D DD D+ DDD D
Sbjct: 432 DDGDDDEDDDNDEDDGDEDDEDEGDDDED 518
Score = 50.1 bits (118), Expect = 5e-07
Identities = 32/106 (30%), Positives = 50/106 (46%), Gaps = 9/106 (8%)
Frame = +3
Query: 60 NNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDD------- 112
+ E ++ +D +D+DD+D N E+ D + + DD G EE D DDD
Sbjct: 255 SEENKDASDTEDDDDDDNVNDGEDDNDDEEDEDFSGDDGG-----EEADSDDDPEANGGG 419
Query: 113 --DSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRR 156
D DD DD D+D D + D D D+ + D ++ P +R+
Sbjct: 420 GSDDDDGDD-DEDDDNDEDDGDEDDEDEGDDDEDEESPQPPSKKRK 554
Score = 47.8 bits (112), Expect = 3e-06
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +3
Query: 32 NPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVV---DR 88
+P + +DQ + T + DA ++ E++ DDD+ +D +++N DEE D
Sbjct: 198 SPMVDGRFPLDQLCKGKHTSEENKDA---SDTEDDDDDDNVNDGEDDNDDEEDEDFSGDD 368
Query: 89 KGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
G+ DD + D+DD D D+ DD+D+D DG+ D D+
Sbjct: 369 GGEEADSDDDPEANGGGGSDDDDGDDDEDDDNDED-DGDEDDEDEGDDDE 515
Score = 28.9 bits (63), Expect = 1.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEP 84
+ D ++ E++ D+DDED+ D++ +E P
Sbjct: 432 DDGDDDEDDDNDEDDGDEDDEDEGDDDEDEESP 530
>TC219641 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 942
Score = 55.8 bits (133), Expect = 1e-08
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +1
Query: 54 SSDAVPNNEP-ENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDD---KGKGKMIEEEDE 109
+ DA ++E + DDDD DD+D+E DE+ + + + DD G G + D+
Sbjct: 367 NKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDDPEANGAGGSDSDGDD 546
Query: 110 DDD--DSDDSDDSDDDSDGNVSGSDSDFSDD 138
DDD D DD D+ DDD + G D D D+
Sbjct: 547 DDDGGDDDDDDNGDDDGEDEEEGEDEDEEDE 639
Score = 50.8 bits (120), Expect = 3e-07
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 64 ENNTDDDDEDDED--EENSDEEPVVDRKGKGIMR---DDKGKGKMIEEEDEDDDDSDDSD 118
+++ D D+E+D+D ++ DEE D G+G +D + D D DD DD
Sbjct: 382 DSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDDPEANGAGGSDSDGDDDDDGG 561
Query: 119 DSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRR 156
D DDD +G+ G D + +D E + D P +R+
Sbjct: 562 DDDDDDNGDDDGEDEEEGEDEDEEDEEDVPQPPAKKRK 675
Score = 36.6 bits (83), Expect = 0.006
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 42 DQETELPTTVNSSSDAVPNNEPENN----------TDDDDEDDEDEENSDEEPVVDRKGK 91
D+E + + +A P ++PE N DDD DD+D++N D++
Sbjct: 439 DEEGDEDFSGEGEEEADPEDDPEANGAGGSDSDGDDDDDGGDDDDDDNGDDD-------- 594
Query: 92 GIMRDDKGKGKMIEEEDEDD 111
+D+ +G+ +EEDE+D
Sbjct: 595 ---GEDEEEGEDEDEEDEED 645
Score = 36.2 bits (82), Expect = 0.008
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 89 KGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSG---SDSDFSDDPLA 141
KGK +K E+ DE++DD D D D++ D + SG ++D DDP A
Sbjct: 343 KGKHTYLLNKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEADPEDDPEA 510
Score = 35.0 bits (79), Expect = 0.017
Identities = 18/53 (33%), Positives = 27/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 96 DDKGKGK----MIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVD 144
DD KGK + ++ + D+D D+ +D DD D + D DFS + E D
Sbjct: 331 DDLCKGKHTYLLNKDASDSDEDGDEEEDDDDADDQDDEEGDEDFSGEGEEEAD 489
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 60 NNEPENNTDDDDEDDEDEENSDEEPVVDRK 89
+++ E+ + +DED+EDEE+ + P RK
Sbjct: 586 DDDGEDEEEGEDEDEEDEEDVPQPPAKKRK 675
Score = 27.3 bits (59), Expect = 3.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 5/30 (16%)
Frame = +1
Query: 60 NNEPENNTDDDDED-----DEDEENSDEEP 84
+++ ++N DDD ED DEDEE+ ++ P
Sbjct: 562 DDDDDDNGDDDGEDEEEGEDEDEEDEEDVP 651
>TC211437 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 857
Score = 55.5 bits (132), Expect = 1e-08
Identities = 30/79 (37%), Positives = 45/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 62 EPENNTDDDDED--DEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDD 119
E E + D+DDED DEDE+ DEE + +G +D+ G+ ++ DE DDD DD+ D
Sbjct: 370 EDEEDGDEDDEDGPDEDEDGDDEEFSGEEGDEGGDPEDEANGEGSDDGDE-DDDGDDNGD 546
Query: 120 SDDDSDGNVSGSDSDFSDD 138
+DD DG D + ++
Sbjct: 547 EEDDDDGEDEEEDEEEDEE 603
Score = 39.7 bits (91), Expect = 7e-04
Identities = 20/48 (41%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
Frame = +1
Query: 100 KGKMIEEEDEDDDDSDDSDDSDDDSDGN---VSGSDSDFSDDPLAEVD 144
+ K E EDE+D D DD D D+D DG+ SG + D DP E +
Sbjct: 349 QNKNSETEDEEDGDEDDEDGPDEDEDGDDEEFSGEEGDEGGDPEDEAN 492
Score = 38.9 bits (89), Expect = 0.001
Identities = 26/99 (26%), Positives = 45/99 (45%)
Frame = +1
Query: 27 HLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVV 86
+L NKN + D++ E + D + E + D ED+ + E SD+
Sbjct: 343 YLQNKNSETEDEEDGDEDDEDGPDEDEDGDDEEFSGEEGDEGGDPEDEANGEGSDDG--- 513
Query: 87 DRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
D G DD G +EED+DD + ++ D+ +D+ +
Sbjct: 514 DEDDDG---DDNG-----DEEDDDDGEDEEEDEEEDEEE 606
>BE822052 similar to GP|4557063|gb|A expressed protein {Arabidopsis
thaliana}, partial (28%)
Length = 668
Score = 53.9 bits (128), Expect = 4e-08
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = -1
Query: 32 NPKLTSTT---TVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDR 88
+PKLT D + T + DA ++E E+ DD D +D+++E DE+ +
Sbjct: 611 SPKLTPXXGRFAFDDLCKGKHTYRLNKDASDSDEDEDEEDDHDTNDQNDEEGDEDFSGEG 432
Query: 89 KGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDG 126
+ + DD D+DD D DD DD+D D DG
Sbjct: 431 EEEADPEDDPEANGAGGSNDDDDSDEDDDDDNDGDDDG 318
Score = 39.7 bits (91), Expect = 7e-04
Identities = 26/102 (25%), Positives = 46/102 (44%)
Frame = -1
Query: 21 DQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENS 80
D+E+ H ++N D+E + + +A P ++PE N DD+D +
Sbjct: 503 DEEDDHDTNDQN---------DEEGDEDFSGEGEEEADPEDDPEANGAGGSNDDDDSDED 351
Query: 81 DEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDD 122
D++ D G DD G EDED+ + +D +D ++
Sbjct: 350 DDD---DNDG-----DDDG-------EDEDEKEGEDEEDEEE 270
Score = 35.8 bits (81), Expect = 0.010
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 96 DDKGKGKMIEEEDEDDDDSDDSDDSDDD---SDGNVSGSDSDFSDDPLAEVD 144
DD KGK ++D DSD+ +D +DD +D N D DFS + E D
Sbjct: 572 DDLCKGKHTYRLNKDASDSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEAD 417
Score = 29.3 bits (64), Expect = 0.96
Identities = 22/96 (22%), Positives = 38/96 (38%), Gaps = 8/96 (8%)
Frame = -1
Query: 2 AEPETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN 61
++ + + EE T + D+E + + D E N D+ ++
Sbjct: 524 SDSDEDEDEEDDHDTNDQNDEEGDEDFSGEGEEEADPED-DPEANGAGGSNDDDDSDEDD 348
Query: 62 EPENNTDDDDED--------DEDEENSDEEPVVDRK 89
+ +N+ DDD ED +EDEE + P RK
Sbjct: 347 DDDNDGDDDGEDEDEKEGEDEEDEEEVPQPPTKKRK 240
>TC232681 weakly similar to GB|AAP21377.1|30102918|BT006569 At1g47970
{Arabidopsis thaliana;} , partial (39%)
Length = 867
Score = 53.9 bits (128), Expect = 4e-08
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 69 DDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNV 128
DDD+D+EDEE+ DE+ D D++ + + + DDDD+DD D+ +D+ D
Sbjct: 211 DDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDNDDDDEDEDEEDEEE 390
Query: 129 SGSDSDFSDDPL 140
G ++D + L
Sbjct: 391 QGEEADLGTEYL 426
Score = 48.1 bits (113), Expect = 2e-06
Identities = 31/97 (31%), Positives = 47/97 (47%), Gaps = 25/97 (25%)
Frame = +1
Query: 55 SDAVPNNEPENNTDDDDEDDEDEENSDEE-------------PVVDRKGKGIMRD-DKGK 100
SD EP+++ +DDD++DEDEE+ +E+ P+V + + D + +
Sbjct: 307 SDVQRGGEPDDDDNDDDDEDEDEEDEEEQGEEADLGTEYLIRPLVTAEEEEASSDFEPEE 486
Query: 101 GKMIEEEDEDDDDSD-----------DSDDSDDDSDG 126
EEED DD+D + D DDSDDD G
Sbjct: 487 NGEEEEEDVDDEDGEKSEAPPKRKRSDKDDSDDDDGG 597
Score = 42.4 bits (98), Expect = 1e-04
Identities = 23/73 (31%), Positives = 41/73 (55%), Gaps = 4/73 (5%)
Frame = +1
Query: 54 SSDAVPNNEPENNTDDDDE----DDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDE 109
S D +NE E + D+DD DD+D+E+ +EE V R G+ D+ +++DE
Sbjct: 205 SFDDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDVQRGGEPDDDDN-------DDDDE 363
Query: 110 DDDDSDDSDDSDD 122
D+D+ D+ + ++
Sbjct: 364 DEDEEDEEEQGEE 402
Score = 39.7 bits (91), Expect = 7e-04
Identities = 23/72 (31%), Positives = 33/72 (44%)
Frame = +1
Query: 48 PTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEE 107
P +A + EPE N ++++ED +DE+ E RK R DK +
Sbjct: 433 PLVTAEEEEASSDFEPEENGEEEEEDVDDEDGEKSEAPPKRK-----RSDK--------D 573
Query: 108 DEDDDDSDDSDD 119
D DDDD + DD
Sbjct: 574 DSDDDDGGEDDD 609
Score = 35.4 bits (80), Expect(2) = 8e-05
Identities = 15/35 (42%), Positives = 19/35 (53%)
Frame = +1
Query: 111 DDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDL 145
DDD D+ D+ DDD D G D D +D E D+
Sbjct: 211 DDDDDNEDEEDDDEDDAPDGGDDDDDEDEEEESDV 315
Score = 26.6 bits (57), Expect(2) = 8e-05
Identities = 13/37 (35%), Positives = 20/37 (53%)
Frame = +2
Query: 43 QETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEEN 79
+E E+ V+ D E E+ DD EDDED+++
Sbjct: 98 EENEVTVLVDEEEDE--EYESEDEVVDDGEDDEDDDD 202
Score = 26.2 bits (56), Expect = 8.1
Identities = 15/42 (35%), Positives = 20/42 (46%)
Frame = +2
Query: 72 EDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDD 113
+++EDEE E+ VVD E+DEDDDD
Sbjct: 125 DEEEDEEYESEDEVVDD----------------GEDDEDDDD 202
Score = 26.2 bits (56), Expect = 8.1
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 4/25 (16%)
Frame = +2
Query: 105 EEEDED----DDDSDDSDDSDDDSD 125
EEEDE+ D+ DD +D +DD D
Sbjct: 128 EEEDEEYESEDEVVDDGEDDEDDDD 202
>TC203361 similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (7%)
Length = 1090
Score = 51.2 bits (121), Expect = 2e-07
Identities = 41/132 (31%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Frame = -1
Query: 35 LTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDE-----ENSDEEPVVDRK 89
LT+T T E + S D + E E+ DD+ +DD+D E +E D
Sbjct: 664 LTNTPTTKGERK-----TQSQDKQRDAEGEDGNDDEGDDDDDGDGGFGEGEEELSSEDGG 500
Query: 90 GKGIMRDDKGKGKMI-------------EEEDED----DDDSDDSDDSDDDSDGNVSGSD 132
G G ++K K E+EDED DDD DD DD DD+ D D
Sbjct: 499 GYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDEDDDDDDDDEEDEGGEEED 320
Query: 133 SDFSDDPLAEVD 144
D ++D E D
Sbjct: 319 EDGAEDEENEED 284
Score = 40.4 bits (93), Expect = 4e-04
Identities = 22/108 (20%), Positives = 53/108 (48%), Gaps = 3/108 (2%)
Frame = -1
Query: 52 NSSSDAVPNNEPENNT---DDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEED 108
NS++ + PE +++ E+DEDE+ D++ ++ED
Sbjct: 487 NSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQD---------------------DDED 371
Query: 109 EDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRR 156
+DDDD D+ D+ ++ D + G++ + +++ + + + + P + R++
Sbjct: 370 DDDDDDDEEDEGGEEEDED--GAEDEENEEDEEDEEEEALQPPKKRKK 233
>TC203635 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (71%)
Length = 1007
Score = 50.1 bits (118), Expect = 5e-07
Identities = 30/107 (28%), Positives = 48/107 (44%)
Frame = +1
Query: 31 KNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKG 90
+NPK S + P V +S V + + DD + + D+ P+V+
Sbjct: 10 RNPKYQSNPLPTHKAMSPGPVVDASPEVDAEQQLPSVDDATQKKIPQPQEDDAPLVE--- 180
Query: 91 KGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSD 137
+ DDK ++D++DDD DD DD +DD+ G GS S+
Sbjct: 181 -DLKDDDK-------DDDDEDDDDDDEDDKEDDAQGGAEGSKQSRSE 297
Score = 30.0 bits (66), Expect = 0.56
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Frame = +1
Query: 81 DEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDD--SDDSDDDSDGNVSGSDSDFSDD 138
D P VD + + DD + K+ + +++D +D DD DDD + + + D DD
Sbjct: 76 DASPEVDAEQQLPSVDDATQKKIPQPQEDDAPLVEDLKDDDKDDDDEDDDDDDEDDKEDD 255
Query: 139 PLAEVDLDNILPSRTRRRTAQSGVRI 164
A+ + SR+ +++ ++ +++
Sbjct: 256 --AQGGAEGSKQSRSEKKSRKAMLKL 327
>TC203787 similar to UP|Q6VBJ3 (Q6VBJ3) Epa4p, partial (6%)
Length = 1056
Score = 49.7 bits (117), Expect = 7e-07
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Frame = -3
Query: 35 LTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDED-----EENSDEEPVVDRK 89
L +T T E+++ S D + E E+ DD+ +DD+D E +E D
Sbjct: 697 LINTPTAKGESKI-----QSEDKQRDAEGEDGNDDEGDDDDDGDGGFGEGEEELSSEDGG 533
Query: 90 GKGIMRDDKGKGKMI-------------EEEDEDDDDSDDSDDSDDDSDGNVSG---SDS 133
G G ++K K E+EDED DD DD D+ DDD D D
Sbjct: 532 GYGNNSNNKSNSKKAPEGGAGGAEENGEEDEDEDGDDQDDDDEDDDDDDEEDEAGEEEDE 353
Query: 134 DFSDDPLAEVDLDN---ILPSRTRRR 156
D ++D E D ++ + P + R++
Sbjct: 352 DGAEDEENEEDEEDEEALQPPKKRKK 275
>TC219510 UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase HD2-P39, complete
Length = 1196
Score = 48.1 bits (113), Expect = 2e-06
Identities = 34/128 (26%), Positives = 59/128 (45%), Gaps = 14/128 (10%)
Frame = +3
Query: 33 PKLTSTTTVDQETELPTTVNSSS------DAVPNNEPENNTDDDDEDDED---EENSDEE 83
P L+ +D ++EL T S+S + N+ ++ D E+DE+ E + +
Sbjct: 261 PHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEELALEGQDNGK 440
Query: 84 PVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNV-----SGSDSDFSDD 138
P + +G + + K K+ D D+ DDSDD+SD ++ SGS + DD
Sbjct: 441 PELKAEGAKVTKPSKSIPKIGAPAKAADPKKDEDDDSDDESDDDLAGEDESGSSHEMDDD 620
Query: 139 PLAEVDLD 146
+E + D
Sbjct: 621 SNSEEESD 644
Score = 33.9 bits (76), Expect = 0.039
Identities = 20/90 (22%), Positives = 37/90 (40%)
Frame = +3
Query: 70 DDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVS 129
D++DD D+E+ D+ D G E D+D + ++SD D+++
Sbjct: 534 DEDDDSDDESDDDLAGEDESGSS------------HEMDDDSNSEEESDGDDEETPAKKG 677
Query: 130 GSDSDFSDDPLAEVDLDNILPSRTRRRTAQ 159
GS + DP+ I + + T +
Sbjct: 678 GSGQE--XDPMESAAKTPISAKKAKTATPE 761
>TC227389 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (63%)
Length = 1144
Score = 47.4 bits (111), Expect = 3e-06
Identities = 46/174 (26%), Positives = 72/174 (40%), Gaps = 35/174 (20%)
Frame = +3
Query: 31 KNPKLTSTTTVDQETELPTTVNSSS----------DAVPNNEPENNTDDDDEDDED---- 76
K P+++ +++E EL + S+S DA +N E+ D DEDDED
Sbjct: 246 KIPQISLELVLEKEFELSHSSKSASVHFCGYKAYYDA--DNSDEDEFTDSDEDDEDVPLI 419
Query: 77 --EENSDEEPVVDRK---GKGIMRDDKGKGKMI---------------EEEDEDDDDSDD 116
E E D K K + G K + + +D+D SD+
Sbjct: 420 NTENGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKKDNEEDSDDDSDDDDFGSSDE 599
Query: 117 S-DDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRRTAQSGVRISGGTP 169
+D+D DSD + SG + D + P +VDL P+ + +T S + TP
Sbjct: 600 EMEDADSDSD-DESGDEDDDEETPPKKVDLGKKRPNESASKTPVSSKKAKNATP 758
Score = 26.6 bits (57), Expect = 6.2
Identities = 16/83 (19%), Positives = 32/83 (38%)
Frame = +3
Query: 7 NNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENN 66
N E + P+ ++ + + K ++ E + +S D +++ E
Sbjct: 429 NGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKKDNEEDSDDDSDDDDFGSSDEEME 608
Query: 67 TDDDDEDDEDEENSDEEPVVDRK 89
D D DDE + D+E +K
Sbjct: 609 DADSDSDDESGDEDDDEETPPKK 677
>TC210126 similar to UP|NUCL_HUMAN (P19338) Nucleolin (Protein C23), partial
(7%)
Length = 735
Score = 45.8 bits (107), Expect = 1e-05
Identities = 25/87 (28%), Positives = 44/87 (49%)
Frame = +3
Query: 53 SSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDD 112
+ D +E + + D D+D EDEE S EE D +G D + G +++D+D+D
Sbjct: 336 TEDDDKDGDEDDEDGHDQDDDGEDEEFSGEEG--DEEGDP-EDDPEANGGGSDDDDDDND 506
Query: 113 DSDDSDDSDDDSDGNVSGSDSDFSDDP 139
+ +D DD +D+ + D + + P
Sbjct: 507 NEEDDDDGEDEEEEEDEEEDEEETSQP 587
Score = 45.1 bits (105), Expect = 2e-05
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +3
Query: 44 ETELPTTVNSSSDAVPNNEPENNTDDDDEDDE---DEENSDEEPVVDRKGKGIMRDDKGK 100
E + T + D ++E ++ DDD ED+E +E + + +P D + G DD
Sbjct: 318 ENKNSETEDDDKDGDEDDEDGHDQDDDGEDEEFSGEEGDEEGDPEDDPEANGGGSDDDDD 497
Query: 101 GKMIEEEDEDDDDSDDSDDSDDDSD 125
EE+D+D +D ++ +D ++D +
Sbjct: 498 DNDNEEDDDDGEDEEEEEDEEEDEE 572
Score = 44.7 bits (104), Expect = 2e-05
Identities = 24/90 (26%), Positives = 45/90 (49%), Gaps = 2/90 (2%)
Frame = +3
Query: 51 VNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEED-- 108
+ + + +++ + + DD+D D+D++ DEE G D++G + E +
Sbjct: 315 LENKNSETEDDDKDGDEDDEDGHDQDDDGEDEE------FSGEEGDEEGDPEDDPEANGG 476
Query: 109 EDDDDSDDSDDSDDDSDGNVSGSDSDFSDD 138
DDD DD+D+ +DD DG + D +D
Sbjct: 477 GSDDDDDDNDNEEDDDDGEDEEEEEDEEED 566
Score = 44.7 bits (104), Expect = 2e-05
Identities = 27/85 (31%), Positives = 42/85 (48%)
Frame = +3
Query: 62 EPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSD 121
E +N+ +DD+ D DE++ D G +DD G E+E+ ++ D+ D +
Sbjct: 318 ENKNSETEDDDKDGDEDDED----------GHDQDDDG-----EDEEFSGEEGDEEGDPE 452
Query: 122 DDSDGNVSGSDSDFSDDPLAEVDLD 146
DD + N GSD D D+ E D D
Sbjct: 453 DDPEANGGGSDDDDDDNDNEEDDDD 527
Score = 44.3 bits (103), Expect = 3e-05
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Frame = +3
Query: 65 NNTDDDDED-DEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDD-------SDD 116
+ T+DDD+D DED+E+ ++ D G+ D++ G+ +EE + +DD SDD
Sbjct: 330 SETEDDDKDGDEDDEDGHDQ---DDDGE----DEEFSGEEGDEEGDPEDDPEANGGGSDD 488
Query: 117 SDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRR 155
DD +D+ + + G D + +D + + + P++ R+
Sbjct: 489 DDDDNDNEEDDDDGEDEEEEEDEEEDEEETSQPPTKKRK 605
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/76 (28%), Positives = 37/76 (47%)
Frame = +3
Query: 42 DQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKG 101
D E E + + P ++PE N D+DD+D +N ++ DD G+
Sbjct: 396 DGEDEEFSGEEGDEEGDPEDDPEANGGGSDDDDDDNDNEED-------------DDDGED 536
Query: 102 KMIEEEDEDDDDSDDS 117
+ EEEDE++D+ + S
Sbjct: 537 EE-EEEDEEEDEEETS 581
Score = 29.3 bits (64), Expect = 0.96
Identities = 17/63 (26%), Positives = 27/63 (41%), Gaps = 3/63 (4%)
Frame = +3
Query: 79 NSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDG---NVSGSDSDF 135
NS + G+ + D G+ E + + DD D +DD DG + G D +F
Sbjct: 237 NSVSPNLTAANGRFPLEDLFGRKHAYLENKNSETEDDDKDGDEDDEDGHDQDDDGEDEEF 416
Query: 136 SDD 138
S +
Sbjct: 417 SGE 425
>TC219508 homologue to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (62%)
Length = 1291
Score = 44.3 bits (103), Expect = 3e-05
Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Frame = +1
Query: 65 NNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDS 124
NN D + +EDEE + E D +G + + K K+ D D+ DDSDD+S
Sbjct: 400 NNASDFSDSEEDEELALEGQDND-EGAKVTKPSKPVPKIGAPAKTADPKKDEGDDSDDES 576
Query: 125 DGNVSGSD----SDFSDD------------PLAEVDLDNILPSRTRRRTAQSGVRISGGT 168
D +++G D SD DD P +VD P+ + +T S + T
Sbjct: 577 DDDLAGEDEFGSSDEMDDDSDSDEESDEETPAKKVDQGKKRPNESAAKTPVSAKKAKTAT 756
Query: 169 P 169
P
Sbjct: 757 P 759
>TC204249 UP|Q9SB11 (Q9SB11) Glycinin, complete
Length = 1916
Score = 44.3 bits (103), Expect = 3e-05
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Frame = +1
Query: 42 DQETELPTTVNSSSDAVPN-NEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGK 100
D+ ++ T S P E ++ +D+DEDDEDE+ P R GK
Sbjct: 811 DERKQIVTVEGGLSVISPKWQEQQDEDEDEDEDDEDEQIPSHPP---------RRPSHGK 963
Query: 101 GKMIEEEDEDDD--------------DSDDSDDSDDDSD 125
+ E+EDED+D D D +D D+D D
Sbjct: 964 REQDEDEDEDEDKPRPSRPSQGKREQDQDQDEDEDEDED 1080
Score = 31.6 bits (70), Expect = 0.19
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +1
Query: 66 NTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSD 125
NT++D + + + + +V +G + K + + E+EDED+DD D+ S
Sbjct: 769 NTNEDIAEKLQSPDDERKQIVTVEGGLSVISPKWQEQQDEDEDEDEDDEDEQIPSHPPRR 948
Query: 126 GNVSGSDSDFSDDPLAEVDLDNILPSR 152
+ + D +D D D PSR
Sbjct: 949 PSHGKREQDEDEDE----DEDKPRPSR 1017
Score = 26.9 bits (58), Expect = 4.8
Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 21 DQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNN---EPENNTDDDDEDDEDE 77
+ +E +P+ P+ S +Q+ + + + P+ E + + D+D+++DED+
Sbjct: 904 EDDEDEQIPSHPPRRPSHGKREQDEDEDEDEDKPRPSRPSQGKREQDQDQDEDEDEDEDQ 1083
Query: 78 ENSDEE 83
E
Sbjct: 1084PRKSRE 1101
>TC218783 similar to UP|Q40363 (Q40363) NuM1 protein, partial (19%)
Length = 870
Score = 43.1 bits (100), Expect = 6e-05
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 17/138 (12%)
Frame = +3
Query: 5 ETNNHEEPTFPTKRKPDQEETHHLPNKNPKLTSTTTVD-----------QETELPTTVNS 53
+ N+ E+ TK P + H K + + ++ D + + PTT
Sbjct: 225 DDNSDEDEAPKTKVAPAAGKNGHASTKKTQPSESSDSDSSDSDSSSDEGKSKKKPTTAKL 404
Query: 54 SSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDD 113
+ V + ++DD+ + DE+N D +P V K R K +E D DD
Sbjct: 405 PTLPVAPAKKVESSDDESSESSDEDN-DAKPAVTAVSKPSARAQ----KKVESSDSDDSS 569
Query: 114 SD------DSDDSDDDSD 125
SD D DD DD SD
Sbjct: 570 SDEDKGKMDIDDDDDSSD 623
Score = 41.2 bits (95), Expect = 2e-04
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Frame = +3
Query: 12 PTFPTKR--KPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDD 69
P P K+ D E + N + T V + + SSD+ ++ E+
Sbjct: 414 PVAPAKKVESSDDESSESSDEDNDAKPAVTAVSKPSARAQKKVESSDSDDSSSDEDKGKM 593
Query: 70 DDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVS 129
D +DD+D + EEP +K K + E D ++DS+D +
Sbjct: 594 DIDDDDDSSDESEEP---QKKKAVKNSK-------ESSDSSEEDSEDESEEKPSKTPQKR 743
Query: 130 GSDSDFSDDPLAE 142
G D + D L+E
Sbjct: 744 GRDVEMVDAALSE 782
Score = 33.9 bits (76), Expect = 0.039
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Frame = +3
Query: 44 ETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVD-----RKGKGIMRDDK 98
E EL T + V + E+++DD D EDE+ + + V + G K
Sbjct: 6 EDELATKKQMNEVKVQKGKEESSSDDSSSDSEDEKPAAKVAVPSKNQSAKNGTLSTLAKK 185
Query: 99 GKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFS 136
GK E DD+ D D++ +G + S
Sbjct: 186 GKPAASSSSSESSDDNSDEDEAPKTKVAPAAGKNGHAS 299
>TC227390 similar to UP|Q8LJS2 (Q8LJS2) Nucleolar histone deacetylase
HD2-P39, partial (24%)
Length = 808
Score = 42.0 bits (97), Expect = 1e-04
Identities = 31/129 (24%), Positives = 53/129 (41%)
Frame = +1
Query: 41 VDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGK 100
V + + ++S+ V EP+ + ++D +DD DE+ DD G
Sbjct: 94 VPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDED-----------------DDFGS 222
Query: 101 GKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSDFSDDPLAEVDLDNILPSRTRRRTAQS 160
+E+ +D DSD D+SDD D D + + + DL P+ + +T S
Sbjct: 223 ----SDEEMEDADSDSDDESDDKED------DDEETHPKNKKADLGKKRPNESASKTPVS 372
Query: 161 GVRISGGTP 169
+ TP
Sbjct: 373 SKKAKNATP 399
Score = 29.3 bits (64), Expect = 0.96
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +1
Query: 33 PKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVD 87
PK + D +++ SS + + + + +++ + DD++D+DEE + D
Sbjct: 160 PKKDNEEDSDDDSDEDDDFGSSDEEMEDADSDSDDESDDKEDDDEETHPKNKKAD 324
>TC206429 similar to UP|Q9LFQ3 (Q9LFQ3) Transcriptional regulatory-like
protein, partial (23%)
Length = 1771
Score = 41.2 bits (95), Expect = 2e-04
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 52 NSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDD 111
N ++ P +N+ D DDED E+ + E D G D+ + EEED +
Sbjct: 358 NGEDESCPEAGGDNDADADDEDSENVSEAGE----DVSGSESAGDECFREDHEEEEDIEH 525
Query: 112 DDSDDSDDSDDDSDGNVSG-SDSDFSDDPLAEVDLDNILP 150
DD D +S+ +++G + D + PL+E L ++ P
Sbjct: 526 DDVDGKAESEGEAEGICDAQAGGDGTSLPLSERFLSSVKP 645
Score = 30.0 bits (66), Expect = 0.56
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = +1
Query: 58 VPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDS 117
+ E E + + D E+D D K K + K + + E+E + D+
Sbjct: 223 IEKEEGELSPNGDSEEDNIVAYGDSNVQSMAKSKHNIERRKYQSRNGEDESCPEAGGDND 402
Query: 118 DDSDDDSDGNVSGSDSDFS 136
D+DD+ NVS + D S
Sbjct: 403 ADADDEDSENVSEAGEDVS 459
>CF922292
Length = 722
Score = 40.8 bits (94), Expect = 3e-04
Identities = 28/116 (24%), Positives = 50/116 (42%)
Frame = -2
Query: 19 KPDQEETHHLPNKNPKLTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEE 78
K QEE ++ T T +Q+T + + S SD E+ D ++ + +
Sbjct: 325 KEKQEEKSDEKSQEKPSEDTKTENQDTSV-SEKRSDSD-------ESQQKSDSDESQQKS 170
Query: 79 NSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSDDDSDGNVSGSDSD 134
+SDE + + D + + + DE + S+ +D+ DSD + SDSD
Sbjct: 169 DSDESEKKSDSAESEKKSDSDESEKKSDSDETEKSSESNDNKQFDSDERENKSDSD 2
Score = 35.4 bits (80), Expect = 0.013
Identities = 23/81 (28%), Positives = 40/81 (48%), Gaps = 6/81 (7%)
Frame = -2
Query: 63 PENNTD-DDDEDDEDEENSDEEPVVDRKGKGIMRDDKGKGKMIEEEDEDDDDSDDSDDSD 121
P+ N+D + ++++ +E S E+P D K + + + E+ D D+S DSD
Sbjct: 346 PDKNSDVKEKQEEKSDEKSQEKPSEDTK-------TENQDTSVSEKRSDSDESQQKSDSD 188
Query: 122 D-----DSDGNVSGSDSDFSD 137
+ DSD + SDS S+
Sbjct: 187 ESQQKSDSDESEKKSDSAESE 125
Score = 33.1 bits (74), Expect = 0.066
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 14/116 (12%)
Frame = -2
Query: 35 LTSTTTVDQETELPTTVNSSSDAVPNNEPENNTDDDDEDDEDEENSDEEPVVDRKGKGIM 94
+TS++ + + N+S +P NN ED+ + + D KG G +
Sbjct: 514 MTSSSVTPVQNVDVSQENNSEVKEQATDPSNNNSQQFEDNRGDLSEDAT-----KGDGSV 350
Query: 95 RDDKGKGKMIEEEDEDDDDSDDSDDSD--------------DDSDGNVSGSDSDFS 136
DK ++E++ D+ S + D DSD + SDSD S
Sbjct: 349 TPDKNSDVKEKQEEKSDEKSQEKPSEDTKTENQDTSVSEKRSDSDESQQKSDSDES 182
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.298 0.124 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,944,595
Number of Sequences: 63676
Number of extensions: 83004
Number of successful extensions: 4158
Number of sequences better than 10.0: 464
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2372
length of query: 172
length of database: 12,639,632
effective HSP length: 91
effective length of query: 81
effective length of database: 6,845,116
effective search space: 554454396
effective search space used: 554454396
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC133780.10