BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC133341.11 + phase: 0 /partial
(1497 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC206345 similar to UP|O24518 (O24518) Unconventional myosin, pa... 440 e-123
TC222927 homologue to UP|Q9M5A6 (Q9M5A6) Unconventional myosin X... 338 8e-93
TC219407 similar to UP|O24517 (O24517) Unconventional myosin, pa... 266 7e-71
BU084190 similar to GP|29170491|d myosin XI {Nicotiana tabacum},... 236 6e-62
AW133006 similar to GP|29170491|d myosin XI {Nicotiana tabacum},... 204 3e-52
BI095224 similar to PIR|T14278|T1 myosin-like protein my4 - comm... 191 2e-48
BM954815 similar to GP|7243765|gb unconventional myosin XI {Vall... 188 2e-47
TC222605 similar to UP|Q6UAL1 (Q6UAL1) Myosin heavy chain class ... 187 2e-47
TC213545 similar to UP|Q9SMY9 (Q9SMY9) Myosin-like protein, part... 186 5e-47
AW156543 similar to PIR|T14275|T1 myosin-like protein my1 - comm... 160 3e-39
TC209847 155 1e-37
BF425039 similar to PIR|T14279|T1 myosin-like protein my5 - comm... 150 5e-36
BI893301 similar to GP|7243765|gb| unconventional myosin XI {Val... 109 9e-33
TC221199 weakly similar to UP|Q9XEI4 (Q9XEI4) Unconventional myo... 129 7e-30
TC208286 weakly similar to UP|Q39160 (Q39160) Myosin, partial (7%) 127 3e-29
TC231239 similar to GB|BAB03161.1|11994771|AP002050 myosin-like ... 112 9e-25
TC212568 similar to UP|Q9ATB7 (Q9ATB7) Myosin subfamily XI heavy... 107 3e-23
CA799104 105 1e-22
BE804821 weakly similar to PIR|T14278|T14 myosin-like protein my... 96 9e-20
TC221955 weakly similar to UP|Q6UAL1 (Q6UAL1) Myosin heavy chain... 96 2e-19
>TC206345 similar to UP|O24518 (O24518) Unconventional myosin, partial (27%)
Length = 1867
Score = 440 bits (1132), Expect = e-123
Identities = 229/426 (53%), Positives = 301/426 (69%), Gaps = 25/426 (5%)
Frame = +1
Query: 1097 ESDVKLKRSCSERHHGSFDSLVNCVSKNIG-FNHGKPIAAFTIYKCLLHWKSFEAERSSV 1155
ES+ K ++S +E+ + D L+ C+++ G F P+AA IYKCLLHW+SFE ER+SV
Sbjct: 13 ESEGKPQKSLNEKQQENQDLLIKCITQXFGIFXGAXPVAACVIYKCLLHWRSFEVERTSV 192
Query: 1156 FDRLIQMIGSAIEDQDDNALMAYWLSNTSALLFLLEQSLKTGTSTNATPNGKPPNPTSLF 1215
FDR+IQ I SA+E QD+ ++AYWLSNTS LL LL+++LK + + TP + +SLF
Sbjct: 193 FDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASSSLF 372
Query: 1216 GRMTKSFLSSPSSANLA-------SPSSVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDN 1268
GRM++ +SP SA L+ + +R+VEAKYPALLFKQQLTA+LEKIYG+IRDN
Sbjct: 373 GRMSQGLRASPQSAGLSFLNGRGLNRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDN 552
Query: 1269 LTKELTSALALCIQAPRTSKGVLRSGRS----FGKDSPMVHWQSIIESLNTLLCTLKENF 1324
L KE++ L LCIQAPR S+ L GR+ + + + HWQSI++SLN L +K N+
Sbjct: 553 LKKEISPLLGLCIQAPRNSRQSLVKGRAQANAVAQQALIAHWQSIVKSLNNYLKIMKANY 732
Query: 1325 IPPVLIRKIFSQTFAFINVQLFNS-----------NGEYVKAGLAELELWCCQAKEEYAG 1373
PP L+RK+F+Q F+FINVQLFNS NGEYVK GLAELE WC +A EEY G
Sbjct: 733 APPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCIEATEEYTG 912
Query: 1374 SSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILSVQQLCKICTLYWDDNYNTRSVS 1433
S+W+ELKHIRQAVGFLVIHQK + S +EI +LCP+LS+QQL +I T+YWDD Y T SVS
Sbjct: 913 SAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVS 1092
Query: 1434 PHVLASMR--MDLDSNDAMNDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENP 1491
V+ +MR M DSN+A++ SFLLDD SSIPFSVDD+S S+Q+ + +D+ P + EN
Sbjct: 1093 TDVITNMRAMMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVEVADVDPPPLIRENS 1272
Query: 1492 AFQFLI 1497
F FL+
Sbjct: 1273 GFGFLL 1290
>TC222927 homologue to UP|Q9M5A6 (Q9M5A6) Unconventional myosin XI, partial
(12%)
Length = 718
Score = 338 bits (868), Expect = 8e-93
Identities = 162/178 (91%), Positives = 171/178 (96%)
Frame = +1
Query: 498 KKPGGIISLLDEACMFPRSTHETFSQKLYQTFKDHKRFSKPKLSPSDFTICHYAGDVTYQ 557
+KPGGII+LLDEACMFPRSTHETF+QKLYQTFK+HKRFSKPKL+ SDFTICHYAGDVTYQ
Sbjct: 184 QKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQ 363
Query: 558 TEYFLDKNKDYVVAEHQSLLYASTCPFVSGLFPPSPEETSKQSKFSSIGSRFKQQLQSLL 617
TE FLDKNKDYVVAEHQ LLYAS CPFVSGLFPPSPEE+SKQSKFSSI SRFKQQLQ+LL
Sbjct: 364 TELFLDKNKDYVVAEHQELLYASKCPFVSGLFPPSPEESSKQSKFSSIASRFKQQLQALL 543
Query: 618 ETLSSTEPHYIRCVKPNNLLKPAIFDNKNVLLQLRCGGVMEAIRISCAGYPTRKAFDE 675
ETLS+TEPHYIRCVKPNNLLKPAIF+NKNVL QLRCGGVMEAIRISCAGYPTRK FDE
Sbjct: 544 ETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDE 717
>TC219407 similar to UP|O24517 (O24517) Unconventional myosin, partial (10%)
Length = 906
Score = 266 bits (679), Expect = 7e-71
Identities = 131/147 (89%), Positives = 138/147 (93%), Gaps = 2/147 (1%)
Frame = +1
Query: 1352 YVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILS 1411
YVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEI+NDLCPI+S
Sbjct: 1 YVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMS 180
Query: 1412 VQQLCKICTLYWDDNYNTRSVSPHVLASMR--MDLDSNDAMNDSFLLDDSSSIPFSVDDL 1469
VQQL +ICTLYWD NYNTRSVSP VL+SMR M DSN+A +DSFLLDDSSSIPFSVDD
Sbjct: 181 VQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVDDF 360
Query: 1470 STSLQEKDFSDMKPADELLENPAFQFL 1496
STSLQEKDFSDMKPADELLENPAF+FL
Sbjct: 361 STSLQEKDFSDMKPADELLENPAFRFL 441
>BU084190 similar to GP|29170491|d myosin XI {Nicotiana tabacum}, partial (9%)
Length = 412
Score = 236 bits (602), Expect = 6e-62
Identities = 120/136 (88%), Positives = 126/136 (92%), Gaps = 1/136 (0%)
Frame = +3
Query: 1129 HGKPIAAFTIYKCLLHWKSFEAERSSVFDRLIQMIGSAIEDQDDNALMAYWLSNTSALLF 1188
HGKPIAAFTIYKCLLHWKSFEAER+SVFDRLIQMIGS IE+QDDN MAYWLSNTSALLF
Sbjct: 3 HGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQDDNDHMAYWLSNTSALLF 182
Query: 1189 LLEQSLKTGTSTNATPNGKPPNPTSLFGRMTKSFLSSPSSANLAS-PSSVVRKVEAKYPA 1247
LLEQSLK+G+S NATP KPPNPTSLFGRMT SFLSSPSSANLA+ P+ VVRKVEAKYPA
Sbjct: 183 LLEQSLKSGSSANATPARKPPNPTSLFGRMTMSFLSSPSSANLAAPPADVVRKVEAKYPA 362
Query: 1248 LLFKQQLTAYLEKIYG 1263
LLFKQQLTAY EKIYG
Sbjct: 363 LLFKQQLTAYFEKIYG 410
>AW133006 similar to GP|29170491|d myosin XI {Nicotiana tabacum}, partial (9%)
Length = 409
Score = 204 bits (518), Expect = 3e-52
Identities = 104/133 (78%), Positives = 114/133 (85%), Gaps = 11/133 (8%)
Frame = +1
Query: 1237 VVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLTKELTSALALCIQAPRTSKGVLRSGRS 1296
+ K+ AKYPALLFKQQLTAY+EKIY I+RDNL KEL S L+LCIQAPRTSKGVLRSGRS
Sbjct: 10 IEHKIYAKYPALLFKQQLTAYVEKIYCILRDNLKKELASMLSLCIQAPRTSKGVLRSGRS 189
Query: 1297 FGKDSPMVHWQSIIESLNTLLCTLKENFIPPVLIRKIFSQTFAFINVQLFN--------- 1347
FGKDSPM HWQSIIESLNTLLCTLKENF+PPVLI+KIF+QTF++INVQLFN
Sbjct: 190 FGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCC 369
Query: 1348 --SNGEYVKAGLA 1358
SNGEYVKAGLA
Sbjct: 370 TFSNGEYVKAGLA 408
>BI095224 similar to PIR|T14278|T1 myosin-like protein my4 - common sunflower,
partial (7%)
Length = 411
Score = 191 bits (486), Expect = 2e-48
Identities = 96/110 (87%), Positives = 103/110 (93%), Gaps = 2/110 (1%)
Frame = +1
Query: 1389 LVIHQKYRISYDEIVNDLCPILSVQQLCKICTLYWDDNYNTRSVSPHVLASMRMDL--DS 1446
+VIHQKYRISYDEI+NDLCPILSVQQL +ICTLYWD NYNTRSVSP VL+SMRM + DS
Sbjct: 1 VVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLSSMRMLMAEDS 180
Query: 1447 NDAMNDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFL 1496
N+A +DSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFL
Sbjct: 181 NNAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFL 330
>BM954815 similar to GP|7243765|gb unconventional myosin XI {Vallisneria
gigantea}, partial (6%)
Length = 424
Score = 188 bits (477), Expect = 2e-47
Identities = 98/135 (72%), Positives = 112/135 (82%), Gaps = 1/135 (0%)
Frame = +2
Query: 1045 LQKQSLSINSPVKTAVENLSTPVSEKLENGHHVAEEPYDADTY-VTPVKQFVAESDVKLK 1103
L KQSL +NS KT E+LST +SEKLENGHHV E+ +A+ VTPVK+F ESD KL+
Sbjct: 23 LVKQSL-LNSSSKTMSEHLSTHISEKLENGHHVLEDQNNAEAQSVTPVKKFGTESDGKLR 199
Query: 1104 RSCSERHHGSFDSLVNCVSKNIGFNHGKPIAAFTIYKCLLHWKSFEAERSSVFDRLIQMI 1163
RS ER H + D+LVNCV KNIGF+HGKP+AAFTIYKCLLHWKSFEAER+SVFDRLIQMI
Sbjct: 200 RSFIERQHENVDALVNCVMKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMI 379
Query: 1164 GSAIEDQDDNALMAY 1178
GSAIE+QDDN LMAY
Sbjct: 380 GSAIENQDDNDLMAY 424
>TC222605 similar to UP|Q6UAL1 (Q6UAL1) Myosin heavy chain class XI E3 protein,
partial (11%)
Length = 687
Score = 187 bits (476), Expect = 2e-47
Identities = 102/225 (45%), Positives = 144/225 (63%), Gaps = 15/225 (6%)
Frame = +2
Query: 1139 YKCLLHWKSFEAERSSVFDRLIQMIGSAIEDQDDNALMAYWLSNTSALLFLLEQSLKTGT 1198
YK LLHW+S EAE++ +FD++ S+IE Q+ +AYWLS TS LLF L+ ++K
Sbjct: 14 YKSLLHWRSLEAEKTHIFDKITHAFRSSIESQEGIHDLAYWLSTTSTLLFYLQCTMKASN 193
Query: 1199 STNATPNGKPPNPTSLFGRMTKSFLSSPSSANLASPSSVV-------RKVEAKYPALLFK 1251
+T A + +P +LFG+M + SS ++S S + KVEAKYPA+LFK
Sbjct: 194 TTKAVSRNRN-SPATLFGKMAQGLRSSSLGLGISSGYSGMVDKTNDQSKVEAKYPAILFK 370
Query: 1252 QQLTAYLEKIYGIIRDNLTKELTSALALCIQAPRTSKGVLRSGRSFGKDSPMV------- 1304
Q LTAY+EKIYG+IRD+L KE++ L LCIQAPR+ + G S S +V
Sbjct: 371 QHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQQALH 550
Query: 1305 -HWQSIIESLNTLLCTLKENFIPPVLIRKIFSQTFAFINVQLFNS 1348
+W+ I++ L+T L L +N++PP++ RKIFSQ F+F+NVQLFNS
Sbjct: 551 MYWKGIVDKLDTALRILSDNYVPPIITRKIFSQVFSFMNVQLFNS 685
>TC213545 similar to UP|Q9SMY9 (Q9SMY9) Myosin-like protein, partial (13%)
Length = 608
Score = 186 bits (473), Expect = 5e-47
Identities = 87/174 (50%), Positives = 132/174 (75%)
Frame = +1
Query: 634 NNLLKPAIFDNKNVLLQLRCGGVMEAIRISCAGYPTRKAFDEFVDRFGLLAPEVLDGSSE 693
N+L +P F+N +V+ QLRCGGV+EA+RIS AGYPTR+ + EFVDRFGL+APE +DGS +
Sbjct: 1 NSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYD 180
Query: 694 EVTACKRILKNVWLEGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSYLARQ 753
+ +IL+ + LE +Q+G+TKVFLRAGQ+ LD+RR+E+L +A IQR++R+++AR+
Sbjct: 181 DKAVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRRLRTFIARR 360
Query: 754 SFILLRVSALQIQAACRGQLARQVFEGMRREASSLLIQRCLRMHIAKKAYKELY 807
FI ++ +AL IQA CRG + R+++ R A+++ IQ+ +RM + + AY +LY
Sbjct: 361 DFISIQAAALSIQACCRGCIGRKIYASKRETAAAISIQKYIRMCLMRHAYVKLY 522
>AW156543 similar to PIR|T14275|T1 myosin-like protein my1 - common
sunflower, partial (12%)
Length = 431
Score = 160 bits (406), Expect = 3e-39
Identities = 79/144 (54%), Positives = 99/144 (67%)
Frame = +3
Query: 434 DIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDIL 493
DIYGFESF NSFEQFCIN NE+LQQHFN+H+FK+EQEEY ++ IDW+ +EF DNQD L
Sbjct: 6 DIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCL 185
Query: 494 DLIEKKPGGIISLLDEACMFPRSTHETFSQKLYQTFKDHKRFSKPKLSPSDFTICHYAGD 553
+L EK+P G++SLLDE FP T TF+ KL Q + F + FT+ HYAG
Sbjct: 186 NLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGER--DQAFTVHHYAGQ 359
Query: 554 VTYQTEYFLDKNKDYVVAEHQSLL 577
VTY T FL+KN+D + + LL
Sbjct: 360 VTYDTTGFLEKNRDLLHLDSIQLL 431
>TC209847
Length = 1275
Score = 155 bits (392), Expect = 1e-37
Identities = 105/326 (32%), Positives = 162/326 (49%), Gaps = 10/326 (3%)
Frame = +2
Query: 1016 DAESKVIQMKTAMQRLEEKFADIEFANHVLQKQSLSINSPVKTAVENLSTPVSEKLENGH 1075
++E K Q++ ++RLEEK +E NHVL++++LS +K+ + + +SEK +
Sbjct: 11 ESEQKCSQLEQNVKRLEEKLLSLEDENHVLRQKALS-TPLLKSNRPSFAKSISEKYSSAI 187
Query: 1076 HVAEEPYDADTYVTPVKQF----VAESDVKLKRSCSERHHGSFDSLVNCVSKNIGFNHGK 1131
E TP K + SD + + +ER +++ L C+ +N+GF +GK
Sbjct: 188 ASRTERKTIFESPTPTKLIAPFTLGLSDSRRSKLTAERQQDNYEFLSKCIKENLGFKNGK 367
Query: 1132 PIAAFTIYKCLLHWKSFEAERSSVFDRLIQMIGSAIEDQDDNALMAYWLSNTSALLFLLE 1191
PIAA IYKCLLHW SFE++R+++FD +I+
Sbjct: 368 PIAARIIYKCLLHWHSFESDRTTIFDSIIK------------------------------ 457
Query: 1192 QSLKTGTSTNATPNGKPPNPTSLFGRMTKSFLSSPSSANLASPSSVVRKVEAKYPALLFK 1251
TN G P +P G V VEAKYPA+LFK
Sbjct: 458 -------GTNEVLKG-PKSPLKFIGY-----------------DDGVAHVEAKYPAILFK 562
Query: 1252 QQLTAYLEKIYGIIRDNLTKELTSALALCIQAPRTSKGVLRSGRS------FGKDSPMVH 1305
QQLTA +EKI+G++RDNL K+L+ L CIQAP+T +GV G+S + S
Sbjct: 563 QQLTACVEKIFGLLRDNLKKDLSPLLGSCIQAPKTGRGV-HGGKSSRFPGGIPQQSSSGQ 739
Query: 1306 WQSIIESLNTLLCTLKENFIPPVLIR 1331
W +I++ L++L+ L++N + VL +
Sbjct: 740 WSNIVKFLDSLMSKLRQNHVCSVLFQ 817
>BF425039 similar to PIR|T14279|T1 myosin-like protein my5 - common
sunflower, partial (8%)
Length = 414
Score = 150 bits (378), Expect = 5e-36
Identities = 75/132 (56%), Positives = 101/132 (75%)
Frame = +3
Query: 808 ASAVSIQTGMRVMAAHCELHSRRRTSAAIIIQSHCRKYLALLNFTKLKKAAIATQCAWRG 867
+SA+ +QTG+R M A E R++T AA IQ++ R+ +A + +L+KAA+ TQC WR
Sbjct: 3 SSAIILQTGLRAMKARDEFRFRKQTKAATYIQAYLRRLIAYSYYKRLQKAAVVTQCGWRR 182
Query: 868 KVARRELRKLKMAARETGALQDAKNKLEKQVEDLTLRLQLEKRLRVDVEEAKAKENERLQ 927
+VARRELR LKMAARETGAL++AK+KLEK+VE+LT RLQ+EKRLR D+EE KA+E +LQ
Sbjct: 183 RVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQETAKLQ 362
Query: 928 SALQKMQLQFKE 939
A MQ+Q +E
Sbjct: 363 EAXHAMQIQVEE 398
>BI893301 similar to GP|7243765|gb| unconventional myosin XI {Vallisneria
gigantea}, partial (5%)
Length = 428
Score = 109 bits (273), Expect(2) = 9e-33
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = -1
Query: 554 VTYQTEYFLDKNKDYVVAEHQSLLYASTCPFVSGLFPPSPEETSKQSKFSSIGSRFK 610
VTYQTE FLDKNKDYVVAEHQ+LLY S CPFVSGLFPPSPEE+SKQSKFSSIGSRFK
Sbjct: 332 VTYQTELFLDKNKDYVVAEHQALLYVSKCPFVSGLFPPSPEESSKQSKFSSIGSRFK 162
Score = 50.8 bits (120), Expect(2) = 9e-33
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = -3
Query: 610 KQQLQSLLETLSSTEPHYIRCVKPN 634
+QQLQ+LLETLS+TEPHYIRCVKPN
Sbjct: 75 QQQLQALLETLSATEPHYIRCVKPN 1
>TC221199 weakly similar to UP|Q9XEI4 (Q9XEI4) Unconventional myosin heavy
chain, partial (7%)
Length = 763
Score = 129 bits (325), Expect = 7e-30
Identities = 69/146 (47%), Positives = 92/146 (62%), Gaps = 4/146 (2%)
Frame = +3
Query: 1356 GLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILSVQQL 1415
GL EL WC ++ AGSSW E KHIRQAVGFLV HQK + S +EI N+LCP+LS+ Q+
Sbjct: 21 GLHELXXWCLXXXDQXAGSSWAEXKHIRQAVGFLVXHQKTQKSLEEITNELCPVLSIPQI 200
Query: 1416 CKICTLYWDDNYNTRSVSPHVLASMR--MDLDSNDAMNDSFLLDDSSSIPFSVDDLSTSL 1473
I T++WDD Y +S V++ MR M DS + N SFLL+ SSIPF ++++ S+
Sbjct: 201 YCIGTMFWDDKYGAHGLSAEVISRMRVIMTEDSINIHNSSFLLEVDSSIPFLMEEMFQSM 380
Query: 1474 QEKDFSDM--KPADELLENPAFQFLI 1497
+ SDM P L + FQFL+
Sbjct: 381 SDIRLSDMDVDPPPILRQRSDFQFLL 458
>TC208286 weakly similar to UP|Q39160 (Q39160) Myosin, partial (7%)
Length = 867
Score = 127 bits (320), Expect = 3e-29
Identities = 63/130 (48%), Positives = 90/130 (68%), Gaps = 2/130 (1%)
Frame = +3
Query: 1369 EEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILSVQQLCKICTLYWDDNYN 1428
EEYAG+SW EL +IRQA+GFLVIHQK + S +EI DLCP+L+V+Q+ +I T+YWDD Y
Sbjct: 3 EEYAGTSWHELNYIRQAIGFLVIHQKRKKSLEEIRQDLCPVLTVRQIYRISTMYWDDKYG 182
Query: 1429 TRSVSPHVLASMR--MDLDSNDAMNDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADE 1486
T+SVS V++ MR + D+ + ++SFLLDD SIPFS +D+ ++ D ++ +
Sbjct: 183 TQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDVDEIDLPEF 362
Query: 1487 LLENPAFQFL 1496
+ E QFL
Sbjct: 363 MSEYSCAQFL 392
>TC231239 similar to GB|BAB03161.1|11994771|AP002050 myosin-like protein
{Arabidopsis thaliana;} , partial (13%)
Length = 655
Score = 112 bits (281), Expect = 9e-25
Identities = 64/154 (41%), Positives = 91/154 (58%), Gaps = 2/154 (1%)
Frame = +3
Query: 601 KFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFDNKNVLLQLRCGGVMEAI 660
K S+ ++FK QL L++ L ST PH+IRC+KPNNL P ++ VL QLRC GV+E +
Sbjct: 177 KAKSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQSLVLQQLRCCGVLEVV 356
Query: 661 RISCAGYPTRKAFDEFVDRFGLLAPEVLDGSSEEVTACKRILK--NVWLEGYQIGKTKVF 718
RIS +G+PTR + +F R+G L E + S + ++ IL N+ E YQ+G TK+F
Sbjct: 357 RISRSGFPTRVSHQKFARRYGFLLLENV-ASQDPLSVSVAILHQFNILPEMYQVGYTKLF 533
Query: 719 LRAGQMAELDTRRSEILGKSASIIQRKVRSYLAR 752
R GQ+ L+ R+ L +Q R Y AR
Sbjct: 534 FRTGQIGVLEDTRNRTL-HGVLRVQSCFRGYRAR 632
>TC212568 similar to UP|Q9ATB7 (Q9ATB7) Myosin subfamily XI heavy chain,
partial (5%)
Length = 226
Score = 107 bits (268), Expect = 3e-23
Identities = 54/71 (76%), Positives = 63/71 (88%)
Frame = +1
Query: 919 KAKENERLQSALQKMQLQFKETKVLLEKEREATKKLEARVPVIQEVPAVDHALLEKLSSE 978
K +ENE+LQSALQ MQLQFKETK+L++KEREA K+ R PVIQEVP VDHA++EKL+SE
Sbjct: 13 KTQENEKLQSALQAMQLQFKETKLLVQKEREAAKREAERAPVIQEVPVVDHAMVEKLTSE 192
Query: 979 NEKLKTLVSSL 989
NEKLKTLVSSL
Sbjct: 193 NEKLKTLVSSL 225
>CA799104
Length = 460
Score = 105 bits (263), Expect = 1e-22
Identities = 57/134 (42%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 604 SIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFDNKNVLLQLRCGGVMEAIRIS 663
S+ ++FK QL L++ L ST PH+IRC+KPNNL P ++ VL QLRC GV+E +RIS
Sbjct: 21 SVATKFKGQLFRLMQQLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRIS 200
Query: 664 CAGYPTRKAFDEFVDRFGLLAPEVLDGSSEEVTACKRILK--NVWLEGYQIGKTKVFLRA 721
+G+PTR +F R+G L + + S + ++ IL N+ E YQ+G TK+F R
Sbjct: 201 RSGFPTRMFHQKFARRYGFLLLDHV-ASQDPLSVSVVILHQFNILPEMYQVGYTKLFFRT 377
Query: 722 GQMAELDTRRSEIL 735
GQ+ L+ R+ L
Sbjct: 378 GQIGVLEDTRNRTL 419
>BE804821 weakly similar to PIR|T14278|T14 myosin-like protein my4 - common
sunflower, partial (5%)
Length = 232
Score = 96.3 bits (238), Expect = 9e-20
Identities = 52/77 (67%), Positives = 57/77 (73%), Gaps = 2/77 (2%)
Frame = +2
Query: 1422 YWDDNYNTRSVSPHVLASMR--MDLDSNDAMNDSFLLDDSSSIPFSVDDLSTSLQEKDFS 1479
YWD NYNTRSVSP VL+SMR M DSN+A +DSFLLDDSSSIP DD TSLQ D S
Sbjct: 2 YWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSIPLYRDDFFTSLQ*NDLS 181
Query: 1480 DMKPADELLENPAFQFL 1496
DM+PA EL+E P FL
Sbjct: 182 DMEPAVELVETPPSNFL 232
>TC221955 weakly similar to UP|Q6UAL1 (Q6UAL1) Myosin heavy chain class XI E3
protein, partial (6%)
Length = 728
Score = 95.5 bits (236), Expect = 2e-19
Identities = 54/131 (41%), Positives = 84/131 (63%), Gaps = 1/131 (0%)
Frame = +1
Query: 921 KENERLQSALQKMQLQFKETKVLLEKEREATK-KLEARVPVIQEVPAVDHALLEKLSSEN 979
+E +LQ+ALQ+M+ Q E + EREA K +E PVI+EVP VD LE L+++N
Sbjct: 4 REIAKLQNALQEMKAQLDEAHAAIIHEREAAKIAIEQAPPVIKEVPVVDETKLELLTNKN 183
Query: 980 EKLKTLVSSLEKKIDETEKRYEEEAKVSEERLKQALDAESKVIQMKTAMQRLEEKFADIE 1039
E+L+T V L+KKI E E+ Y E ++ RLK+A +A+ K Q++ ++RLE +++E
Sbjct: 184 EELETEVEELKKKIKEFEESYSEIENENQARLKEAEEAQLKATQLQETIERLELSLSNLE 363
Query: 1040 FANHVLQKQSL 1050
N VL +++L
Sbjct: 364 SENQVLCQKAL 396
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,726,752
Number of Sequences: 63676
Number of extensions: 797150
Number of successful extensions: 4439
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 4326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4405
length of query: 1497
length of database: 12,639,632
effective HSP length: 109
effective length of query: 1388
effective length of database: 5,698,948
effective search space: 7910139824
effective search space used: 7910139824
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Medicago: description of AC133341.11