BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC131248.10 - phase: 0
(1039 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215803 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, par... 960 0.0
TC215151 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 838 0.0
TC216172 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, par... 761 0.0
TC217784 similar to UP|P93155 (P93155) Cellulose synthase , part... 587 e-168
TC215149 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 552 e-157
TC230955 homologue to UP|Q6XP46 (Q6XP46) Cellulose synthase, par... 380 e-105
TC230957 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, par... 350 2e-96
TC211132 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 336 3e-92
TC215804 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, par... 309 4e-84
TC230969 homologue to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like... 306 4e-83
TC206323 similar to UP|Q6J8X1 (Q6J8X1) Cellulose synthase, parti... 300 2e-81
TC216171 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, par... 289 5e-78
AW279531 homologue to PIR|T10800|T10 cellulose synthase (EC 2.4.... 275 6e-74
TC231157 similar to GB|CAC82909.1|25136916|ATH297948 cellulose s... 270 3e-72
AW186367 similar to GP|23534479|g cellulose synthase {Populus tr... 260 2e-69
TC225020 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, par... 251 1e-66
BI785569 homologue to GP|13925881|g cellulose synthase catalytic... 248 8e-66
BM143179 homologue to GP|6446577|gb cellulose synthase catalytic... 247 2e-65
TC233310 similar to UP|Q6J8W9 (Q6J8W9) Cellulose synthase, parti... 243 4e-64
TC215148 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 239 6e-63
>TC215803 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, partial (57%)
Length = 2145
Score = 960 bits (2482), Expect = 0.0
Identities = 462/637 (72%), Positives = 529/637 (82%), Gaps = 4/637 (0%)
Frame = +3
Query: 407 KINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYI 466
+INALVAKA K PEEGW MQDGT WPGNN RDHPGMI V+LG +G LD +G ELP+LVY+
Sbjct: 3 RINALVAKAQKMPEEGWTMQDGTAWPGNNPRDHPGMIHVFLGHSGGLDTDGNELPRLVYV 182
Query: 467 SREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQL 526
SREKRPG+ HHKKAGAMNAL+RVSAVLTN ++LN+DCDHY NNSKAL+EAMCF+MDP +
Sbjct: 183 SREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVI 362
Query: 527 GKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGY 586
GKK CYVQFPQRFDGID HDRYANRN VFFDINMKG DG+QGPVYVGTG FNRQALYGY
Sbjct: 363 GKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGY 542
Query: 587 DPPVSEK--RPKMTC-DCWPKWCCFCCGSRKTKSKKKSGTNGRSLFSRLYKKKKMGGKDY 643
DP ++E+ P + CW GSRK G G +S KKK MG +
Sbjct: 543 DPVLTEEDLEPNIIVKSCW--------GSRK------KGKGGNKKYSD--KKKAMGRTE- 671
Query: 644 VRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGT 703
+ +F++E+IEEG+EGY++ E++ LMSQKS EKRFGQSPVFIA+T ME GG+P T
Sbjct: 672 ---STVPIFNMEDIEEGVEGYDD-ERTLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPST 839
Query: 704 NTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPA 763
N +L+KEAIH ISCGYE+KT+WGKEIGWIYGSVTEDILTGFKMH RGW S+YCMP RPA
Sbjct: 840 NPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPA 1019
Query: 764 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTS 823
FKGSAPINLSDRL+QVLRWALGS+EIFLSRHCPLWYGY GKLK L RLAY NTIVYPFTS
Sbjct: 1020 FKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGKLKPLMRLAYINTIVYPFTS 1199
Query: 824 IPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRN 883
IPL+AYCT+PA CLLT KFIIP ++N AS+WF+ LF+SI T +LELRWSGV+IEDWWRN
Sbjct: 1200 IPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFVSIFTTSILELRWSGVSIEDWWRN 1379
Query: 884 EQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPT 942
EQFWVIGG SAHLFAVFQGLLKVLAG+DTNFTVT+KA+D D +F ELY+FKWT+LLIPPT
Sbjct: 1380 EQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPT 1559
Query: 943 TLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIV 1002
T++I+N+VG+VAGVS AINSG SWGPLFGKLFFA WVI HLYPFLKGL+G+QNRTPTIV
Sbjct: 1560 TVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIV 1739
Query: 1003 VLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
++WS+LLASIFSL+WVRIDPF QCG+ C
Sbjct: 1740 IVWSVLLASIFSLLWVRIDPFTSDSNKLTNGQCGINC 1850
>TC215151 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic subunit,
partial (50%)
Length = 2007
Score = 838 bits (2166), Expect = 0.0
Identities = 401/551 (72%), Positives = 462/551 (83%), Gaps = 2/551 (0%)
Frame = +2
Query: 491 AVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYAN 550
AVLTN PF+LNLDCDHYINNSKALREAMCF+MDP LGK +CYVQFPQRFDGIDR+DRYAN
Sbjct: 2 AVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYAN 181
Query: 551 RNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCC 610
RNTVFFDIN++GLDGIQGPVYVGTG VFNR ALYGY+PP+ K K P + C
Sbjct: 182 RNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKK------PGFLSSLC 343
Query: 611 GSRKTKSKKKSGTNGRSLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYE-ELEK 669
G + K + KS G KKK D + +F LE+IEEG+EG + EK
Sbjct: 344 GGNR-KKRSKSSKKGSD------KKKSSKNVD----PTVPIFSLEDIEEGVEGAGFDDEK 490
Query: 670 SSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKE 729
S LMSQ S EKRFGQS VF+ASTLMENGG+P+ ++L+KEAIH ISCGYE+K++WG E
Sbjct: 491 SLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSE 670
Query: 730 IGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEI 789
IGWIYGSVTEDILTGFKMH RGW+S+YCMPK PAFKGSAPINLSDRL+QVLRWALGSVEI
Sbjct: 671 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEI 850
Query: 790 FLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTN 849
SRHCP+WYGY G+LK+LER AY NT +YP TSIPLL YCT+PAVCLLT KFIIP ++N
Sbjct: 851 LFSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISN 1030
Query: 850 LASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAG 909
+AS+WF++LF+SI TG+LE+RWSGV I++WWRNEQFWVIGGVSAHLFAVFQGLLKVLAG
Sbjct: 1031 IASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAG 1210
Query: 910 VDTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWG 968
+DTNFTVT+KA+D D +F ELY+FKWTTLLIPPTTL+I+N+VGVVAG+S AINSG SWG
Sbjct: 1211 IDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWG 1390
Query: 969 PLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQT 1028
PLFGKLFFAFWVI+HLYPFLKGLMG+QNRTPTIVV+WSILLASIFSL+WVRIDPF + T
Sbjct: 1391 PLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVT 1570
Query: 1029 GPILKQCGVEC 1039
GP ++QCG+ C
Sbjct: 1571 GPDVEQCGINC 1603
>TC216172 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, partial (37%)
Length = 1464
Score = 761 bits (1965), Expect = 0.0
Identities = 367/386 (95%), Positives = 377/386 (97%)
Frame = +3
Query: 654 LEEIEEGLEGYEELEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAI 713
LEEIEEGLEGYE+LEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTN+QSLVKEAI
Sbjct: 3 LEEIEEGLEGYEDLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSQSLVKEAI 182
Query: 714 HNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLS 773
H ISCGYEEKT+WGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLS
Sbjct: 183 HVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLS 362
Query: 774 DRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIP 833
DRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYL+R+AYTNTIVYP+TSIPLLAYCTIP
Sbjct: 363 DRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLQRMAYTNTIVYPWTSIPLLAYCTIP 542
Query: 834 AVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVS 893
AVCLLTGKFIIPTL NLAS+WFMALFISIILT VLELRWSGV IE WRNEQFWVIGGVS
Sbjct: 543 AVCLLTGKFIIPTLNNLASIWFMALFISIILTSVLELRWSGVTIEALWRNEQFWVIGGVS 722
Query: 894 AHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNIVGVV 953
AHLFAVFQGLLKVL GVDTNFTVTAKAA+D EFGELYLFKWTTLLIPPTTLIILNIVGVV
Sbjct: 723 AHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVV 902
Query: 954 AGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIF 1013
AGVSDAIN+G GSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIF
Sbjct: 903 AGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIF 1082
Query: 1014 SLIWVRIDPFLPKQTGPILKQCGVEC 1039
SLIWVRIDPFLPKQTGP+LKQCGVEC
Sbjct: 1083 SLIWVRIDPFLPKQTGPVLKQCGVEC 1160
>TC217784 similar to UP|P93155 (P93155) Cellulose synthase , partial (36%)
Length = 1341
Score = 587 bits (1513), Expect = e-168
Identities = 275/339 (81%), Positives = 306/339 (90%), Gaps = 1/339 (0%)
Frame = +2
Query: 697 GGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVY 756
GGLPE ++ L+KEAIH ISCGYEEKT WGKEIGWIYGSVTEDILTGFKM CRGW+SVY
Sbjct: 8 GGLPESSDPSMLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSVY 187
Query: 757 CMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGY-GGKLKYLERLAYTN 815
CMP RPAFKGSAPINLSDRLHQVLRWALGSVEIF SRHCPLWYG+ GG+LK+L+RLAY N
Sbjct: 188 CMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYIN 367
Query: 816 TIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGV 875
TIVYPFTS+PL+AYCT+PA+CLLTGKFIIPTL+NLAS F+ LF+SII+T VLELRWSGV
Sbjct: 368 TIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASALFLGLFLSIIVTSVLELRWSGV 547
Query: 876 AIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWT 935
IE WRNEQFWVIGGVSAHLFAVFQG LK+LAGVDTNFTVTAKAADD EFGELY+ KWT
Sbjct: 548 TIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDTEFGELYIIKWT 727
Query: 936 TLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQ 995
TLLIPPTTLII+NIVGVVAG SDA+N G SWGPLFGK+FFAFWVI HLYPFLKGLMG+Q
Sbjct: 728 TLLIPPTTLIIINIVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQ 907
Query: 996 NRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 1034
NRTPTIV+LWS+LLAS+FSL+WV+I+PF+ + + Q
Sbjct: 908 NRTPTIVILWSVLLASVFSLVWVKINPFISRPDSASISQ 1024
>TC215149 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic subunit,
partial (29%)
Length = 1265
Score = 552 bits (1423), Expect = e-157
Identities = 250/314 (79%), Positives = 288/314 (91%), Gaps = 1/314 (0%)
Frame = +2
Query: 727 GKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGS 786
G EIGWIYGSVTEDILTGFKMH RGW+S+YCMPKRPAFKGSAPINLSDRL+QVLRWALGS
Sbjct: 2 GSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 181
Query: 787 VEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPT 846
VEI SRHCP+WYGYGG+LK+LER AY NT +YP T+IPLL YC +PAVCLLT KFIIP
Sbjct: 182 VEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIPQ 361
Query: 847 LTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKV 906
++NLAS+WF++LF+SI TG+LE+RWSGV I++WWRNEQFWVIGGVSAHLFAVFQGLLKV
Sbjct: 362 ISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKV 541
Query: 907 LAGVDTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSG 965
LAG+DTNFTVT+KA+D D +F ELY+FKWTTLLIPPTTL+I+N+VGVVAG+S AINSG
Sbjct: 542 LAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQ 721
Query: 966 SWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLP 1025
SWGPLFGKLFFAFWVI+HLYPFLKGLMG+QNRTPTIVV+WS+LLASIFSL+WVRIDPF
Sbjct: 722 SWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTT 901
Query: 1026 KQTGPILKQCGVEC 1039
+ TGP +++CG+ C
Sbjct: 902 RVTGPDVEECGINC 943
>TC230955 homologue to UP|Q6XP46 (Q6XP46) Cellulose synthase, partial (26%)
Length = 862
Score = 380 bits (977), Expect = e-105
Identities = 185/272 (68%), Positives = 222/272 (81%), Gaps = 12/272 (4%)
Frame = +3
Query: 158 NEEWQERVEKWKVRQEKR------GLLNKE------DGKEDQGEEDEYLMAEARQPLWRK 205
N W+ERV+ WK++QEK G E D D +D L EARQPL RK
Sbjct: 42 NVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRK 221
Query: 206 VPIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQF 265
V IPSS INPYR+VI++RLVIL F +RI P +AYPLWL+SVICEIWFA+SWILDQF
Sbjct: 222 VSIPSSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQF 401
Query: 266 PKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDY 325
PKWLP+ RETYLDRL++R++REGEP+QL+ VD+FVS+ DPLKEPP++TANTVLSIL+VDY
Sbjct: 402 PKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTGDPLKEPPLVTANTVLSILAVDY 581
Query: 326 PVEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDK 385
PV+KV+CYVSDDGA+ML F+ LAETSEFAR+WVPF KKYSIEPRAPE+YF++KIDYLKDK
Sbjct: 582 PVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFSQKIDYLKDK 761
Query: 386 VEPTFVKERRSMKREYEEFKVKINALVAKALK 417
V P+FVK+RR+MKREYEEFKV+IN LV+KA K
Sbjct: 762 VHPSFVKDRRAMKREYEEFKVRINGLVSKAQK 857
>TC230957 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, partial (18%)
Length = 593
Score = 350 bits (897), Expect = 2e-96
Identities = 151/197 (76%), Positives = 180/197 (90%)
Frame = +3
Query: 692 TLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRG 751
TL++NGG+P+G + SL+KEAI ISCGYE+KT+WGKE+GWIYGSVTEDILTGFKMHC G
Sbjct: 3 TLLDNGGVPQGVSPASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHG 182
Query: 752 WKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERL 811
W+SVYC+PKRPAFKGSAPINLSDRLHQVLRWALGSVEIF SRHCP+WYGYGG LK+LER
Sbjct: 183 WRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPIWYGYGGGLKWLERF 362
Query: 812 AYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELR 871
+Y N++VYP+TS+PLL YCT+PA+CLLTGKFI+P ++N AS+ FMALFISI TG+LE++
Sbjct: 363 SYINSVVYPWTSLPLLVYCTLPAICLLTGKFIVPEISNYASIVFMALFISIAATGILEMQ 542
Query: 872 WSGVAIEDWWRNEQFWV 888
W GV+I+DWWRNEQFWV
Sbjct: 543 WGGVSIDDWWRNEQFWV 593
>TC211132 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic
subunit, partial (19%)
Length = 615
Score = 336 bits (862), Expect = 3e-92
Identities = 154/203 (75%), Positives = 185/203 (90%)
Frame = +2
Query: 206 VPIPSSLINPYRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQF 265
V IPSS INPYR+VI +RLVIL F +RI P +AY LWLISVICEIWFA+SWILDQF
Sbjct: 5 VSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQF 184
Query: 266 PKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDY 325
PKWLP+ RETYLDRL++R+++EGEP+QL+ VD+FVS+VDPLKEPP++TANTVLSILSVDY
Sbjct: 185 PKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDY 364
Query: 326 PVEKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDK 385
PV+KV+CYVSDDGA+ML F+ LAETSEFAR+WVPF KKYSIEPRAPE+YF +KIDYLKDK
Sbjct: 365 PVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDK 544
Query: 386 VEPTFVKERRSMKREYEEFKVKI 408
V+P+FVK+RR+MKREYEEFK+++
Sbjct: 545 VQPSFVKDRRAMKREYEEFKIRV 613
>TC215804 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, partial (17%)
Length = 825
Score = 309 bits (792), Expect = 4e-84
Identities = 143/190 (75%), Positives = 166/190 (87%), Gaps = 1/190 (0%)
Frame = +1
Query: 851 ASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGV 910
AS+WF+ LF+SI T +LELRWSGV+IEDWWRNEQFWVIGG SAHLFAVFQGLLKVLAG+
Sbjct: 4 ASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGI 183
Query: 911 DTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGP 969
DTNFTVT+KA+D D +F ELY+FKWT+LLIPPTT++I+N+VG+VAGVS AINSG SWGP
Sbjct: 184 DTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGP 363
Query: 970 LFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTG 1029
LFGKLFFA WVI HLYPFLKGL+G+QNRTPTIV++WS+LLASIFSL+WVRIDPF
Sbjct: 364 LFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRIDPFTSDSNK 543
Query: 1030 PILKQCGVEC 1039
QCG+ C
Sbjct: 544 LTNGQCGINC 573
>TC230969 homologue to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like protein D4
(Fragment), partial (29%)
Length = 947
Score = 306 bits (783), Expect = 4e-83
Identities = 164/311 (52%), Positives = 207/311 (65%), Gaps = 53/311 (17%)
Frame = +3
Query: 291 NQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVEKVTCYVSDDGASMLLFDCLAET 350
+ L +D+FVS+ DP KEPP++TANT+LSIL+ DYPVEK++CYVSDDG ++L F+ +AE
Sbjct: 24 SDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEA 203
Query: 351 SEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVEPTFVKERRSMKREYEEFKVKINA 410
+ FA WVPFC+K+ IEPR PE YFN K D K+KV+P FVK+RR +KREY+EFKV+IN+
Sbjct: 204 ASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINS 383
Query: 411 LVA------------------------------KALKKPEEGWVMQDGTPWPG------- 433
L + +K P+ W M DGT WPG
Sbjct: 384 LPESIRRRSDAYHAREEIKAMKVQRQNREDEPLETVKIPKATW-MADGTHWPGTWLSPTS 560
Query: 434 -NNTRDHPGMIQVYL---------GSAG------ALDVEGKELPKLVYISREKRPGYPHH 477
++ DH G+IQV L GSA DV+ + LP LVY+SREKRPGY H+
Sbjct: 561 EHSKGDHAGIIQVMLKPPSDEPLLGSADDTRLIDLTDVDIR-LPLLVYVSREKRPGYDHN 737
Query: 478 KKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQ 537
KKAGAMNALVR SA+++N PF+LNLDCDHYI NSKA+RE MCF+MD + G +LCYVQFPQ
Sbjct: 738 KKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMD-RGGDRLCYVQFPQ 914
Query: 538 RFDGIDRHDRY 548
RF+GID DRY
Sbjct: 915 RFEGIDPSDRY 947
>TC206323 similar to UP|Q6J8X1 (Q6J8X1) Cellulose synthase, partial (18%)
Length = 976
Score = 300 bits (768), Expect = 2e-81
Identities = 139/210 (66%), Positives = 173/210 (82%)
Frame = +2
Query: 830 CTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVI 889
CT+ L+ F ++N AS+ FMALFISI TG+LE++W GV I DWWR EQFWVI
Sbjct: 104 CTLWCFKLMLFFFFSSQISNYASIIFMALFISIAATGILEMQWGGVGIHDWWRKEQFWVI 283
Query: 890 GGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNI 949
GG S+HLFA+FQGLLKVLAGV+TNFTVT+KAADD EF +LY+FKWT+LLIPP TL+I+NI
Sbjct: 284 GGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFADLYIFKWTSLLIPPLTLLIINI 463
Query: 950 VGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILL 1009
+GV+ GVSDAIN+G SWGPLFG+LFFA WVIVHLYPFLKG+MGKQ PTI+++W+ILL
Sbjct: 464 IGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILL 643
Query: 1010 ASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
+SI +L+WVRI+PFL K + +L+ CG+ C
Sbjct: 644 SSILTLLWVRINPFLAK-SDVVLEICGLNC 730
>TC216171 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, partial (14%)
Length = 748
Score = 289 bits (739), Expect = 5e-78
Identities = 141/150 (94%), Positives = 144/150 (96%)
Frame = +2
Query: 890 GGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNI 949
GGVSAHLFAVFQGLLKVL GVDTNFTV AA+D EFGELYLFKWTTLLIPPTTLIILNI
Sbjct: 2 GGVSAHLFAVFQGLLKVLGGVDTNFTVFF*AAEDTEFGELYLFKWTTLLIPPTTLIILNI 181
Query: 950 VGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILL 1009
VGVVAGVSDAIN+G GSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILL
Sbjct: 182 VGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILL 361
Query: 1010 ASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
ASIFSLIWVRIDPFLPKQTGP+LKQCGVEC
Sbjct: 362 ASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 451
>AW279531 homologue to PIR|T10800|T10 cellulose synthase (EC 2.4.1.-)
catalytic chain celA2 - upland cotton (fragment),
partial (19%)
Length = 406
Score = 275 bits (704), Expect = 6e-74
Identities = 129/134 (96%), Positives = 132/134 (98%)
Frame = +3
Query: 407 KINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYI 466
KIN+LVAKA KKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYI
Sbjct: 3 KINSLVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYI 182
Query: 467 SREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQL 526
SREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHY+NNSKA+REAMCFLMDP L
Sbjct: 183 SREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPNL 362
Query: 527 GKKLCYVQFPQRFD 540
GKKLCYVQFPQRFD
Sbjct: 363 GKKLCYVQFPQRFD 404
>TC231157 similar to GB|CAC82909.1|25136916|ATH297948 cellulose synthase-like
protein {Arabidopsis thaliana;} , partial (23%)
Length = 932
Score = 270 bits (689), Expect = 3e-72
Identities = 127/255 (49%), Positives = 183/255 (70%), Gaps = 4/255 (1%)
Frame = +1
Query: 772 LSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCT 831
++DRLHQVLRWA GSVEIF SR+ L ++K+L+R+AY N +YPFTS+ L+ YC
Sbjct: 16 VTDRLHQVLRWATGSVEIFFSRNNALLAS--PRMKFLQRVAYFNVGMYPFTSMFLIVYCF 189
Query: 832 IPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGG 891
+PAV L +G+FI+ +L+ V+ + + I++ L +LE++WSG+ + DWWRNEQFW+IGG
Sbjct: 190 LPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGG 369
Query: 892 VSAHLFAVFQGLLKVLAGVDTNFTVTAKAA----DDAEFGELYLFKWTTLLIPPTTLIIL 947
SAH AV QGL KV+AGVD +FT+T+K+A D EF +LY KW+ L++PP T++++
Sbjct: 370 TSAHPVAVLQGL*KVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIMMV 549
Query: 948 NIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSI 1007
N + + GV+ + S W L G +FF+FWV+ HLYPF KGLMG++ + PTI+ +WS
Sbjct: 550 NSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSG 729
Query: 1008 LLASIFSLIWVRIDP 1022
LL+ I SL+WV I+P
Sbjct: 730 LLSIIISLLWVYINP 774
>AW186367 similar to GP|23534479|g cellulose synthase {Populus tremuloides},
partial (13%)
Length = 431
Score = 260 bits (665), Expect = 2e-69
Identities = 118/140 (84%), Positives = 131/140 (93%)
Frame = +1
Query: 398 KREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEG 457
+REYEEFKV+INALVAKA K P+ GW+MQDGTPWPGNNT+DHPGMIQV+LGS+G LD EG
Sbjct: 10 QREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGSSGGLDTEG 189
Query: 458 KELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREA 517
+LP+LVY+SREKRPG+ HHKKAGAMNALVRVSAVLTNAPFMLNLDCDHY+NNSKA REA
Sbjct: 190 NQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREA 369
Query: 518 MCFLMDPQLGKKLCYVQFPQ 537
MCFLMDPQ GKK+CYVQFPQ
Sbjct: 370 MCFLMDPQTGKKVCYVQFPQ 429
>TC225020 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, partial (14%)
Length = 960
Score = 251 bits (641), Expect = 1e-66
Identities = 116/154 (75%), Positives = 140/154 (90%)
Frame = +1
Query: 886 FWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLI 945
FWVIGGVS+HLFA+FQGLLKVLAGV+TNFTVT+KAADD EF ELY+FKWT+LLIPP TL+
Sbjct: 1 FWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYIFKWTSLLIPPMTLL 180
Query: 946 ILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLW 1005
I+NIVGVV GVSDAIN+G SWGPLFG+LFFA WVI+HLYPFLKGL+GKQ+R PTI+++W
Sbjct: 181 IMNIVGVVVGVSDAINNGYDSWGPLFGRLFFALWVILHLYPFLKGLLGKQDRMPTIILVW 360
Query: 1006 SILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1039
SILLASI +L+WVRI+PF+ + GP+L+ CG+ C
Sbjct: 361 SILLASILTLMWVRINPFVSRD-GPVLEICGLNC 459
>BI785569 homologue to GP|13925881|g cellulose synthase catalytic subunit
{Nicotiana alata}, partial (12%)
Length = 421
Score = 248 bits (634), Expect = 8e-66
Identities = 114/140 (81%), Positives = 127/140 (90%)
Frame = +1
Query: 668 EKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTDWG 727
EKS LMSQ FEK+FGQS VFIASTLME+GG+ +G + SL+KEAIH ISCGYE+KT+WG
Sbjct: 1 EKSWLMSQLKFEKKFGQSAVFIASTLMEDGGILKGATSASLLKEAIHVISCGYEDKTEWG 180
Query: 728 KEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSV 787
KE+GWIYGSVTEDILTGFKMHC GW+SVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSV
Sbjct: 181 KEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSV 360
Query: 788 EIFLSRHCPLWYGYGGKLKY 807
EI LS+HCP+WYGYG LK+
Sbjct: 361 EILLSKHCPIWYGYGCGLKW 420
>BM143179 homologue to GP|6446577|gb cellulose synthase catalytic subunit
{Gossypium hirsutum}, partial (14%)
Length = 455
Score = 247 bits (630), Expect = 2e-65
Identities = 111/151 (73%), Positives = 136/151 (89%)
Frame = +3
Query: 216 YRIVIIMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWLPITRET 275
YR+VI++R IL F +RI P +AYPLWL+SVICEIWFA+SWILDQFPKWLP+ RET
Sbjct: 3 YRMVIMLR*FILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRET 182
Query: 276 YLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVEKVTCYVS 335
YLDRL++R+++EGEP+QL+ VD+FVS+VDPLKEPP++TANTVLSIL+VDYPV+KV+CYVS
Sbjct: 183 YLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVS 362
Query: 336 DDGASMLLFDCLAETSEFARRWVPFCKKYSI 366
DDGA+ML F+ LAETSEFAR+WVPF KKYSI
Sbjct: 363 DDGAAMLTFEALAETSEFARKWVPFSKKYSI 455
>TC233310 similar to UP|Q6J8W9 (Q6J8W9) Cellulose synthase, partial (16%)
Length = 651
Score = 243 bits (619), Expect = 4e-64
Identities = 116/137 (84%), Positives = 130/137 (94%)
Frame = +3
Query: 888 VIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIIL 947
VIGGVSAHLFAVFQGLLK+LAGVDTNFTVTAKAA+D+EFGELYL KWTTLLIPPTTLII+
Sbjct: 3 VIGGVSAHLFAVFQGLLKMLAGVDTNFTVTAKAAEDSEFGELYLVKWTTLLIPPTTLIIV 182
Query: 948 NIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSI 1007
N+VGVVAG SDA+N G SWGPLFGK+FFAFWVI HLYPFLKGLMG+QNRTPTIVVL S+
Sbjct: 183 NMVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLLSV 362
Query: 1008 LLASIFSLIWVRIDPFL 1024
LLAS+FSL+WV+I+PF+
Sbjct: 363 LLASVFSLVWVKINPFV 413
>TC215148 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic subunit,
partial (13%)
Length = 865
Score = 239 bits (609), Expect = 6e-63
Identities = 113/142 (79%), Positives = 129/142 (90%), Gaps = 1/142 (0%)
Frame = +2
Query: 899 VFQGLLKVLAGVDTNFTVTAKAAD-DAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVS 957
V GLLKVLAG+DTNFTVT+KA+D D +F ELYLFKWTTLLIPPTTL+I+N+VGVVAG+S
Sbjct: 2 VSXGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGIS 181
Query: 958 DAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIW 1017
AINSG SWGPLFGKLFFAFWVI+HLYPFLKGLMG+QNRTPTIVV+WSILLASIFSL+W
Sbjct: 182 YAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLW 361
Query: 1018 VRIDPFLPKQTGPILKQCGVEC 1039
VRIDPF + TGP ++QCG+ C
Sbjct: 362 VRIDPFTTRVTGPDVEQCGINC 427
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.139 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,223,995
Number of Sequences: 63676
Number of extensions: 887719
Number of successful extensions: 6302
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 5956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6207
length of query: 1039
length of database: 12,639,632
effective HSP length: 107
effective length of query: 932
effective length of database: 5,826,300
effective search space: 5430111600
effective search space used: 5430111600
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC131248.10