BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130275.9 + phase: 0
(487 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BU547952 116 2e-26
BI971277 90 2e-18
TC222739 79 3e-15
TC232237 77 1e-14
TC224365 74 2e-13
BF424021 71 9e-13
BG882754 66 4e-11
AW472212 62 4e-10
BG839940 62 6e-10
BE440441 55 7e-08
BE806487 54 1e-07
BE346622 53 3e-07
BE609719 53 3e-07
TC221646 52 8e-07
TC222234 49 5e-06
BU765323 46 3e-05
BE800256 46 4e-05
CA819940 42 8e-04
AW830987 36 0.034
BE021513 33 0.29
>BU547952
Length = 699
Score = 116 bits (291), Expect = 2e-26
Identities = 63/154 (40%), Positives = 93/154 (59%), Gaps = 3/154 (1%)
Frame = -3
Query: 290 KKWGIMVKE--LTIPPLYIGDHRGTVFRNIVAFEKCHKRCNPDMTTYMFFLNRLINSAND 347
+ W I K+ L IP L I D ++F N++A E+CH C+ D+T+Y+ F++ LINS D
Sbjct: 679 RXWDIKFKDGKLRIPRLLIHDGTKSLFLNLIAXEQCHLDCSNDITSYVIFMDNLINSPED 500
Query: 348 VSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDMNESYLYNVVNEANEYLGCWRARFRA 407
V LHY+G+I H LGSD VA+L N + +E+V D+N SYL + + N Y + A
Sbjct: 499 VGYLHYRGIIEHWLGSDAEVADLFNRLCQEVVFDINNSYLSPLSEDVNRYYNHRWNTWCA 320
Query: 408 SLVHNYLTS-WAVGLSTLGALLALYFTFIQAICG 440
SL HNY ++ WA+ +S + A++ L T Q G
Sbjct: 319 SLRHNYFSNPWAI-ISLVAAVVLLLLTLAQTYYG 221
>BI971277
Length = 700
Score = 90.1 bits (222), Expect = 2e-18
Identities = 58/175 (33%), Positives = 98/175 (55%), Gaps = 2/175 (1%)
Frame = -1
Query: 264 SITELKEGGVKIKACESRELMDISFGKKWGIMVKELTIPPLYIGDHRGTVFRNIVAFEKC 323
+I ELKE G+ +K+ ++R D+SF W + EL +P + + D N++A+E C
Sbjct: 682 NIKELKEAGIVLKSSKTRRPRDVSFSYGW--IRSELKLPEIVVDDTTAATVLNLIAYEMC 509
Query: 324 HKRCNP-DMTTYMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDM 382
N + +Y+ FL+ LI+ +DV AL + ++ +SLGSDE VA L N I+ ++VPDM
Sbjct: 508 PDFENDYGICSYVSFLDSLIDHPDDVKALRSEQILLNSLGSDEEVANLFNTISTDLVPDM 329
Query: 383 NESYLYNVVNEANEYLGCWRARFRASLVHNYLTS-WAVGLSTLGALLALYFTFIQ 436
+ +V NE ++ + A H Y ++ WA+ ++ A++ L TF+Q
Sbjct: 328 VK--YADVRNEIEKHYSDKSRTWLALGYHTYFSNPWAI-IAFHAAVVGLALTFVQ 173
>TC222739
Length = 756
Score = 79.3 bits (194), Expect = 3e-15
Identities = 59/227 (25%), Positives = 94/227 (40%), Gaps = 30/227 (13%)
Frame = +2
Query: 235 EHVLDLLRYNIRPKLIGEEPRG------------CQSQ-MIHSITELKEGGVKIKACESR 281
+H DL+RY P I E CQ + ++ + T+L E GV + + R
Sbjct: 35 KHFTDLIRYTFLPTKIQVEGVNNVSVNPSQHFTPCQVECVLRTATKLNEAGVSFEKVQGR 214
Query: 282 ELMDISFGK----------------KWGIMVKELTIPPLYIGDHRGTVFRNIVAFEKCHK 325
+DI F K KW L IP L + V RN++A E+CH
Sbjct: 215 SYLDIKFEKTPILSWFLCFGCLPFSKW--FKARLQIPHLKVDQVTECVLRNLIALEQCHY 388
Query: 326 RCNPDMTTYMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDMNES 385
P + Y+ ++ LI++ DV L +I H LGS +A +IN + K ++ + +
Sbjct: 389 SDQPFICNYVTLIDSLIHTQEDVELLVDTEIIDHELGSHTELATMINGLCKHVL--VTSN 562
Query: 386 YLYNVVNEANEYLGCWRARFRASLVHNYLTS-WAVGLSTLGALLALY 431
Y E NE+ C + L+ Y W + +G + L+
Sbjct: 563 YYGKTTKELNEHYNCCWKHYMGMLISVYFRDPWRFSSTIVGIAVFLF 703
>TC232237
Length = 673
Score = 77.4 bits (189), Expect = 1e-14
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Frame = +1
Query: 299 LTIPPLYIGDHRGTVFRNIVAFEKCHKRCNPDMTT-YMFFLNRLINSANDVSALHYKGVI 357
LT+P L I D FRNIVAFE+CH + ++ T Y L+ LIN+ DV+ L K +I
Sbjct: 52 LTMPILNIADDSEMFFRNIVAFEQCHLSDDTNIITQYRKILDFLINTEKDVNVLVDKKII 231
Query: 358 HHSLGSDEHVAELINNIAKEI-VPDMNESYLYNVVNEANEYLGCWRARFRASLVHNYL-T 415
+ +G VA ++N++ I +P N Y +++ N N++ +++A H+Y T
Sbjct: 232 VNWMGDANAVATMVNSLGSNIGMPRFNPVY-FSLCNSLNDFYESPCNKYKAIFKHDYFNT 408
Query: 416 SWAVGLSTLGALLALYFTFIQAIC 439
W + ST+ A++ L T IQ IC
Sbjct: 409 PWKIA-STVAAIVLLLLTLIQTIC 477
>TC224365
Length = 766
Score = 73.6 bits (179), Expect = 2e-13
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Frame = +1
Query: 299 LTIPPLYIGDHRGTVFRNIVAFEKCHKRCNPDMTTYMFFLNRLINSANDVSALHYKGVIH 358
L IP L + VF+N+VAFE+ H P Y+ F++ LI++ DV L K VI
Sbjct: 109 LRIPQLKVDHTTERVFKNLVAFEQFHYPDKPYFCNYVSFIDSLIHTQLDVELLVEKEVIV 288
Query: 359 HSLGSDEHVAELINNIAKEIVPDMNESYLYNVVNEANE-YLGCWRARFRASLVHNYLTSW 417
H LGSD+ VA L+N + K +V N + ++++N+ N+ Y+ W A + + W
Sbjct: 289 HELGSDKEVATLVNGLCKHVV--TNSTCYHHIINKLNDHYMNDWNHTIAALRLVYFRDLW 462
Query: 418 AVGLSTLGALLALYFTF 434
+ +G + ++ F
Sbjct: 463 RASGTVVGIAVLVFAVF 513
>BF424021
Length = 421
Score = 71.2 bits (173), Expect = 9e-13
Identities = 38/116 (32%), Positives = 67/116 (57%)
Frame = +3
Query: 264 SITELKEGGVKIKACESRELMDISFGKKWGIMVKELTIPPLYIGDHRGTVFRNIVAFEKC 323
S ++L E G+ KA + L ++ + + G+M +P L I D T+FRNI+A E+C
Sbjct: 75 SASQLSEVGMVFKASSCKCLFELKYHHRKGVM----EMPCLTIEDRTETLFRNILALEQC 242
Query: 324 HKRCNPDMTTYMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNIAKEIV 379
H +P++T ++F LN LIN+ DV+ L K +I + +G V ++ N++ ++
Sbjct: 243 HYILSPNVTQFLFLLNFLINTEKDVNILVDKKIIVNWMGDANAVVKMFNSLCSNVI 410
>BG882754
Length = 399
Score = 65.9 bits (159), Expect = 4e-11
Identities = 44/131 (33%), Positives = 67/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 301 IPPLYIGDHRGTVFRNIVAFEKCHKRCNPDMTTYMFFLNRLINSANDVSALHYKGVIHHS 360
IP L + D T+FRN+VA E+CH +T Y+ FL+ L+N+ DV L + V +
Sbjct: 5 IPQLVVDDLTETLFRNMVALEQCHYLFQSYITDYVGFLDFLVNTNRDVDILVQERVFINW 184
Query: 361 LGSDEHVAELINNIAKEIVPDMNESYLYNVVNEANE--YLGCWRARFRASLVHNYLTS-W 417
LG + VA +IN + K I +N S Y V+E + WR + +++L +Y W
Sbjct: 185 LGDTDSVATMINGLMKNITTPINTSSQYLDVSEKLNAFHKNPWR-KLKSALRRDYCRGPW 361
Query: 418 AVGLSTLGALL 428
ST +L
Sbjct: 362 QTAASTAAVIL 394
>AW472212
Length = 429
Score = 62.4 bits (150), Expect = 4e-10
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Frame = +2
Query: 39 EKNESVCIYRVPPNMLNVEPKAYIPSNISIGPYHYGSQHLQEMEVLKNKFFHRLFDP-NG 97
E ++ CIY+VP ++L + +AY P ISIGP H L++ E K ++FH + +
Sbjct: 62 EVHDQCCIYKVPHHLLKLNVEAYTPQFISIGPLHSDKPELKQ-EKQKQRYFHAFWKRLSH 238
Query: 98 ANGSKLEEACKFLEKEEINARNCYMGEIKLSSDEFLKMMLVDGSFIIQL-LRDLSDNEFK 156
G L + FLE+ NCY ++F+ ++L+D FI++L LR + +E K
Sbjct: 239 KQGLALSQYKAFLEENIEKIGNCYSKPELHKEEKFVDLILLDSVFIMELFLRKANKSEQK 418
Query: 157 H 157
+
Sbjct: 419 N 421
>BG839940
Length = 635
Score = 62.0 bits (149), Expect = 6e-10
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Frame = +2
Query: 315 RNIVAFEKCHKRCNPDMTTYMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNI 374
RN VA E+ H + Y+F LI+++ DV L KG++ + LG VA ++NN+
Sbjct: 125 RNXVAIEQGHYPFQTYIXDYIFVFXFLIDTSQDVDTLVDKGIMINXLGDSSAVANMVNNL 304
Query: 375 AKEIVPD---MNESYLYNVVNEANEYLGCWRARFRASLVHNYL-TSWAVGLSTLGALLAL 430
+V + +N Y+Y + + N + +++A +H+Y T W + S + A++ L
Sbjct: 305 CLNVVQENININGGYIY-LCRKLNCFYEDPSHKYKAIFMHDYFSTPWKI-TSFIAAIVLL 478
Query: 431 YFTFIQAIC 439
+ T IQA C
Sbjct: 479 FLTLIQATC 505
>BE440441
Length = 427
Score = 55.1 bits (131), Expect = 7e-08
Identities = 34/107 (31%), Positives = 56/107 (51%), Gaps = 3/107 (2%)
Frame = -1
Query: 334 YMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDMNESYLYNVVNE 393
Y+ ++ LI++ DV L K VI H LGSD+ VA L+N ++K +V N + Y +NE
Sbjct: 427 YVSLIDSLIHTQLDVELLVEKEVIVHELGSDKEVAVLVNGLSKHVV--ANTTCYYETINE 254
Query: 394 ANE-YLGCWRARFRASLVHNYLTSWAVGLSTLGALLALY--FTFIQA 437
N+ Y W A + + W + +G ++ ++ F FI+A
Sbjct: 253 LNKHYQNIWNRTMAALWLVYFRDPWRASSTLVGIVVLIFAVFQFIRA 113
>BE806487
Length = 397
Score = 54.3 bits (129), Expect = 1e-07
Identities = 33/85 (38%), Positives = 44/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 38 EEKNESVC-IYRVPPNMLNVEPKAYIPSNISIGPYHYGSQHLQEMEVLKNKFFHRLFDPN 96
EE S C IY+VP N+ V +AY P ISIGP H Q L M+ K ++FH F
Sbjct: 103 EELRLSECSIYKVPYNLRKVNEEAYTPQWISIGPIHLDKQELNPMQEHKKRYFH-CFWER 279
Query: 97 GANGSKLEEACKFLEKEEINARNCY 121
+N + LE +E + R+CY
Sbjct: 280 VSNEQAMRNFKHHLETKEDHIRHCY 354
>BE346622
Length = 489
Score = 53.1 bits (126), Expect = 3e-07
Identities = 36/121 (29%), Positives = 60/121 (48%), Gaps = 2/121 (1%)
Frame = +1
Query: 28 VEKELQSIKPEEKNESVCIYRVPPNMLNVEPKAYIPSNISIGPYHYGSQ-HLQEMEVLKN 86
+E L+ +P E CIY+VP ++ + AY P +SIGP+++ HLQ ME K+
Sbjct: 118 IEAILEGTEPHVTKEC-CIYKVPFHIRRLREDAYTPKVVSIGPFNHNRHVHLQNME--KH 288
Query: 87 KFFH-RLFDPNGANGSKLEEACKFLEKEEINARNCYMGEIKLSSDEFLKMMLVDGSFIIQ 145
K + + F S + ++E E R CY ++ E +K++ VD I++
Sbjct: 289 KLMYCKAFLKRTKTSS--DSWMSYIEGVEPKFRRCYSETLEFRKKELVKIIFVDSGXILE 462
Query: 146 L 146
L
Sbjct: 463 L 465
>BE609719
Length = 337
Score = 52.8 bits (125), Expect = 3e-07
Identities = 34/114 (29%), Positives = 64/114 (55%), Gaps = 1/114 (0%)
Frame = -2
Query: 73 YGSQHLQEMEVLKNKFFHRLFDPNGANGSKLEEACKFLEKEEINARNCYMGEIKLSSDEF 132
+G LQ+ME K+K F+ + + + K +E+ E R CY ++ S ++
Sbjct: 336 HGHPRLQDME--KHKLFYSMAFLQRSQTTSDSFIGK-IEEMEPELRRCYSHTLEFSKEQL 166
Query: 133 LKMMLVDGSFIIQLLRDLSDNEFKHVPSLSRWM-LPTIRREMIMLENQLPMFVL 185
+K++ VD +FI++L E+K LS+ + + ++R ++++LENQ+P FVL
Sbjct: 165 VKIIFVDCAFILELFCRFGSGEWKEDMYLSKPLTMRSMRYDLLLLENQVPFFVL 4
>TC221646
Length = 790
Score = 51.6 bits (122), Expect = 8e-07
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Frame = +1
Query: 251 GEEPRGCQSQMIHSITELKEGGVKIKACESRELMDISFGKKWGIMVKELTIPPLYIGDHR 310
G++ + Q ++ T L+ GV I+ E + FG L IPPL++ D
Sbjct: 52 GQKVKQAQQELKRCATRLRAAGVTIRKVERHSKLVNWFGFDIRFSKGVLEIPPLHVVDTT 231
Query: 311 GTVFRNIVAFEKCHKRCNPDMTTYMFFLNRLINSANDVSALHYKGV-IHHSLGSDEHVAE 369
RN +A+E+ N T+Y FL L+ S D+ L GV + + S+ +
Sbjct: 232 EVYLRNFIAWEQSRIGINRQFTSYALFLRGLMCSVQDIELLVENGVLVKGTKISNRDLLT 411
Query: 370 LINNIAKEIVPDMNESY 386
L I K V M+ SY
Sbjct: 412 LFGTITKG-VDQMDNSY 459
>TC222234
Length = 580
Score = 48.9 bits (115), Expect = 5e-06
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +3
Query: 331 MTTYMFFLNRLINSANDVSALHYKGVIHHSLGSDEHVAELINNIAKEIVPDMNESYLYNV 390
+T Y+ L+ L+N++ DV L KGV+ + LG + VA++ N + K + S+ +
Sbjct: 24 VTDYVAVLDFLVNTSRDVDVLVRKGVLVNWLGDSDSVADMFNGLWKNVTHINFSSHYSEL 203
Query: 391 VNEANEYLGCWRARFRASLVHNYL-TSWAVGLSTLGALLALYFTFIQAIC 439
+ N + + +++L +Y T W + +S G +L L + +Q++C
Sbjct: 204 CQKLNAFCRNPCHKLKSTLRRDYCKTPWQIAVSIAGIVL-LVLSLVQSVC 350
>BU765323
Length = 399
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/62 (33%), Positives = 34/62 (53%)
Frame = -1
Query: 24 WRGLVEKELQSIKPEEKNESVCIYRVPPNMLNVEPKAYIPSNISIGPYHYGSQHLQEMEV 83
W + K L+ E+ +V I+ VP ++ +P +Y+P ++IGPYHY L EM+
Sbjct: 309 WVINIRKTLEEEVEEDGEFAVSIFSVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQR 130
Query: 84 LK 85
K
Sbjct: 129 YK 124
>BE800256
Length = 403
Score = 45.8 bits (107), Expect = 4e-05
Identities = 42/142 (29%), Positives = 59/142 (40%), Gaps = 14/142 (9%)
Frame = +2
Query: 193 DKNNSLHPQMSFYNLSFKFFYRLLQSESRKTPECQTSYKFKIEHVLDLLRYNIRPKLIGE 252
DKN S S LS K Y +S+ R Y +H DL+RY P
Sbjct: 5 DKNRSRKNYFSGALLSSKKPYNKSKSKDR--------YSKSTKHFTDLIRYFYLPS-DWL 157
Query: 253 EPRGCQSQMIHSITELKEGGVKIKACESRELMDISFGKK--------WGIM------VKE 298
GC ++ + T+L++ GV + R L+DISF KK +G +
Sbjct: 158 RSSGCALHVLRTATKLQDSGVSFEKDVERRLLDISFDKKPILSSFLCFGCLPYLNHFKAR 337
Query: 299 LTIPPLYIGDHRGTVFRNIVAF 320
IP L + VFRN++AF
Sbjct: 338 FRIPQLKVDHTTECVFRNLIAF 403
>CA819940
Length = 409
Score = 41.6 bits (96), Expect = 8e-04
Identities = 37/129 (28%), Positives = 60/129 (45%), Gaps = 12/129 (9%)
Frame = +1
Query: 161 LSRWMLPTIRREMIMLENQLPMFVLTKLFELTDKN----------NSLHPQMSFYNLSFK 210
L W+ +R ++++LENQLP FVL LF L+ ++ ++ P ++F +F
Sbjct: 28 LKPWLTTNVRLDLLLLENQLPFFVLDHLFGLSMQSYTSTSGRGGKKNIPPFIAF---TFD 198
Query: 211 FFYRLLQSESRKTPECQTSYKFKIEHVLDLLRYNIRPKLIGEEPRGCQSQMIH--SITEL 268
+F +SE + I+H DLLR L + + ++H S EL
Sbjct: 199 YFSFYNRSE-------LNFHGVMIKHFTDLLR---TFHLQHPQQNRIEKTVVHLPSAAEL 348
Query: 269 KEGGVKIKA 277
E GV+ KA
Sbjct: 349 SEAGVRFKA 375
>AW830987
Length = 391
Score = 36.2 bits (82), Expect = 0.034
Identities = 16/37 (43%), Positives = 23/37 (61%)
Frame = +3
Query: 46 IYRVPPNMLNVEPKAYIPSNISIGPYHYGSQHLQEME 82
IY+VP + V+ AY P ISIGP H+ + L+ M+
Sbjct: 264 IYKVPCYLRKVKEDAYTPQCISIGPIHFKKEELKPMQ 374
>BE021513
Length = 411
Score = 33.1 bits (74), Expect = 0.29
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Frame = +1
Query: 59 KAYIPSNISIGPYHYGSQHLQEMEVLKNKFFHRLFDPNGANGSKLEEACKFLEKEEINAR 118
K Y P +S+GP H+G++ LQ E K ++ + G L K + + N +
Sbjct: 19 KHYEPKLMSLGPIHHGAEKLQLGEQCKQRWAATYIESTGKTPQTLH---KRVVDDFENQK 189
Query: 119 NCYMGEIKLSS-------------DEFLKMMLVDGSFIIQLLRDLSDNEFKHVPSLSRW- 164
+ ++ L+S ++ M+ VD ++Q+L ++ H P +
Sbjct: 190 KLFDDDLLLASTQQYQKQGFTTMEEKIQWMLFVDACALLQIL----EHANLHAPEKMKIK 357
Query: 165 --MLPTIRREMIMLENQL 180
L + ++++LENQL
Sbjct: 358 VDQLVLVMGDVLLLENQL 411
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,744,065
Number of Sequences: 63676
Number of extensions: 317562
Number of successful extensions: 1568
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of query: 487
length of database: 12,639,632
effective HSP length: 101
effective length of query: 386
effective length of database: 6,208,356
effective search space: 2396425416
effective search space used: 2396425416
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC130275.9