BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC127019.17 + phase: 0 /pseudo
(170 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215414 homologue to UP|O80412 (O80412) Mitochondrial phosphate... 114 2e-26
TC230106 homologue to UP|O80412 (O80412) Mitochondrial phosphate... 112 7e-26
BM094791 similar to GP|18252510|gb phosphate transporter {Glycin... 98 2e-21
TC213247 weakly similar to UP|SFC1_YEAST (P33303) Succinate/fuma... 50 5e-07
TC215271 similar to PIR|T01729|T01729 mitochondrial solute carri... 48 2e-06
TC215274 similar to PIR|T01729|T01729 mitochondrial solute carri... 47 3e-06
TC209848 similar to GB|AAP42736.1|30984546|BT008723 At1g07030 {A... 46 1e-05
TC207968 similar to UP|Q9SJ70 (Q9SJ70) Probable calcium-binding ... 45 1e-05
BQ252823 44 3e-05
TC209762 44 4e-05
TC229448 similar to UP|Q6YVE7 (Q6YVE7) Mitochondrial aspartate-g... 44 5e-05
TC227864 uncoupling protein 1a [Glycine max] 43 8e-05
TC208522 similar to UP|Q6YVE7 (Q6YVE7) Mitochondrial aspartate-g... 43 8e-05
TC214634 homologue to UP|O49447 (O49447) ADP, ATP carrier-like p... 40 5e-04
TC208944 similar to UP|Q9ZWG1 (Q9ZWG1) Uncoupling protein AtUCP2... 39 0.001
TC210690 weakly similar to GB|AAP37832.1|30725620|BT008473 At4g1... 39 0.002
TC222492 weakly similar to GB|AAP37832.1|30725620|BT008473 At4g1... 38 0.002
TC214671 homologue to UP|O49447 (O49447) ADP, ATP carrier-like p... 38 0.002
TC212927 similar to UP|Q9ZNY4 (Q9ZNY4) Mitochondrial energy tran... 37 0.005
TC214628 homologue to UP|O49875 (O49875) Adenine nucleotide tran... 37 0.005
>TC215414 homologue to UP|O80412 (O80412) Mitochondrial phosphate
transporter, complete
Length = 1639
Score = 114 bits (285), Expect = 2e-26
Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Frame = +1
Query: 13 TPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLW 72
+P +YA CT GG+LS G TH+A TPLD++K NMQ+ P KY SISS F LL+EQG +
Sbjct: 283 SPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFF 462
Query: 73 KGWTGKFFGYGAQGGCRFGLYEYFKGVYSNV----LVDQHRSLVY 113
+GW GY AQG C+FG YE+FK YS++ ++++L+Y
Sbjct: 463 RGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIY 597
>TC230106 homologue to UP|O80412 (O80412) Mitochondrial phosphate
transporter, complete
Length = 1640
Score = 112 bits (281), Expect = 7e-26
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +2
Query: 13 TPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLW 72
+P +YA CT GG+LS G TH+ TPLD++K NMQ+ P KY SISS F LL+EQG +
Sbjct: 368 SPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFF 547
Query: 73 KGWTGKFFGYGAQGGCRFGLYEYFKGVYSNV----LVDQHRSLVY 113
+GW GY AQG C+FG YE+FK YS++ ++++L+Y
Sbjct: 548 RGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIY 682
>BM094791 similar to GP|18252510|gb phosphate transporter {Glycine max},
partial (40%)
Length = 431
Score = 98.2 bits (243), Expect = 2e-21
Identities = 44/105 (41%), Positives = 66/105 (61%), Gaps = 4/105 (3%)
Frame = +2
Query: 13 TPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLW 72
+P +YA CT+GG LS G TH TPLDV+K N+Q+ P+KY + S+ F + EQG +
Sbjct: 35 SPSFYAACTVGGSLSCGPTHTGITPLDVVKCNIQIDPVKYKNTSTGFGVMFFEQGLRGFF 214
Query: 73 KGWTGKFFGYGAQGGCRFGLYEYFKGVYSNV----LVDQHRSLVY 113
+GW GY AQG ++G YE+FK YS++ ++++L+Y
Sbjct: 215 RGWGPTLVGYSAQGAFKYGFYEFFKKYYSDIAGPEYATKYKTLIY 349
>TC213247 weakly similar to UP|SFC1_YEAST (P33303) Succinate/fumarate
mitochondrial transporter (Regulator of acetyl-CoA
synthetase activity), partial (11%)
Length = 829
Score = 50.1 bits (118), Expect = 5e-07
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +3
Query: 22 IGGMLSAGTTHLATTPLDVLKVNM--QVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKF 79
+GG LS T+ AT PLD+++ + Q + Y IS F+T+ R++G L+KG
Sbjct: 84 VGGGLSGITSASATYPLDLVRTRLAAQRSTMYYRGISHAFSTICRDEGFLGLYKGLGATL 263
Query: 80 FGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLV 112
G G F +YE+ + V+ + D +++V
Sbjct: 264 LGVGPSIAISFAVYEWLRSVWQSQRPDDSKAVV 362
>TC215271 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (78%)
Length = 1089
Score = 48.1 bits (113), Expect = 2e-06
Identities = 31/97 (31%), Positives = 46/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 6 GGISQELTPRYYALCTIGGMLSAGTTHL-ATTPLDVLK----VNMQVHPIKYYSISSCFT 60
G +LTP L +G AG + AT P+D+++ V + P +Y + +
Sbjct: 612 GNEDAQLTP----LLRLGAGACAGIIAMSATYPMDMVRGRITVQTEASPYQYRGMFHALS 779
Query: 61 TLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFK 97
T+LRE+GP L+KGW G G F +YE K
Sbjct: 780 TVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLK 890
>TC215274 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (77%)
Length = 1034
Score = 47.4 bits (111), Expect = 3e-06
Identities = 31/97 (31%), Positives = 46/97 (46%), Gaps = 5/97 (5%)
Frame = +2
Query: 6 GGISQELTPRYYALCTIGGMLSAGTTHL-ATTPLDVLK----VNMQVHPIKYYSISSCFT 60
G +LTP L +G AG + AT P+D+++ V + P +Y + +
Sbjct: 551 GNEDAQLTP----LLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALS 718
Query: 61 TLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFK 97
T+LRE+GP L+KGW G G F +YE K
Sbjct: 719 TVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLK 829
>TC209848 similar to GB|AAP42736.1|30984546|BT008723 At1g07030 {Arabidopsis
thaliana;} , partial (29%)
Length = 528
Score = 45.8 bits (107), Expect = 1e-05
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +2
Query: 22 IGGMLSAGTTHLATTPLDVLKVNMQVH---PIKYYSISSCFTTLLREQGPSVLWKGWTGK 78
I G ++ H+A P+D +K MQ P+K ++ T+L+ +GPS L++G
Sbjct: 272 IAGSIAGCVEHMAMFPVDTVKTRMQALGSCPVKSVTVRHALKTILQSEGPSALYRGIGAM 451
Query: 79 FFGYGAQGGCRFGLYEYFKGVYS 101
G G F +YE K +S
Sbjct: 452 GLGAGPAHAVYFSVYETCKKKFS 520
>TC207968 similar to UP|Q9SJ70 (Q9SJ70) Probable calcium-binding
mitochondrial carrier At2g35800, partial (21%)
Length = 884
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/74 (33%), Positives = 36/74 (47%)
Frame = +3
Query: 24 GMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYG 83
G LS G + TTP DV+K M + S++ ++L+ +GP L+KG +FF
Sbjct: 408 GALSGGLAAVVTTPFDVMKTRMMTAQGRSVSMTLIAFSILKHEGPLGLFKGAVPRFFWIA 587
Query: 84 AQGGCRFGLYEYFK 97
G F YE K
Sbjct: 588 PLGAMNFAGYELAK 629
>BQ252823
Length = 421
Score = 44.3 bits (103), Expect = 3e-05
Identities = 24/83 (28%), Positives = 40/83 (47%), Gaps = 3/83 (3%)
Frame = +1
Query: 22 IGGMLSAGTTHLATTPLDVLKVNMQVH---PIKYYSISSCFTTLLREQGPSVLWKGWTGK 78
I G ++ H+A P+D +K MQ P+K ++ ++L+ +GPS L++G
Sbjct: 166 IAGSIAGCVEHMAMFPVDTVKTRMQAIGSCPVKSVTVRHALKSILQSEGPSALYRGIGAM 345
Query: 79 FFGYGAQGGCRFGLYEYFKGVYS 101
G G F +YE K +S
Sbjct: 346 GLGAGPAHAVYFSVYETCKKKFS 414
>TC209762
Length = 950
Score = 43.9 bits (102), Expect = 4e-05
Identities = 28/81 (34%), Positives = 40/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 23 GGMLSAGTTHLATTPLDVLKVNMQV--HPIKYYSISSCFTTLLREQGPSVLWKGWTGKFF 80
GG+++ T+ TTPLD +K +QV H + SI L+ E G ++G+ +FF
Sbjct: 347 GGIIAGATSSCITTPLDTIKTRLQVMGHENR-SSIKQVAKDLINEDGWRGFYRGFGPRFF 523
Query: 81 GYGAQGGCRFGLYEYFKGVYS 101
A G YEY K V S
Sbjct: 524 SMSAWGTSMILTYEYLKRVCS 586
>TC229448 similar to UP|Q6YVE7 (Q6YVE7) Mitochondrial aspartate-glutamate
carrier protein-like, partial (96%)
Length = 1000
Score = 43.5 bits (101), Expect = 5e-05
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 2/76 (2%)
Frame = +1
Query: 24 GMLSAGTTHLATTPLDVLKVNMQVHPI--KYYSISSCFTTLLREQGPSVLWKGWTGKFFG 81
G + T TTPLDV+K + V +Y I C T+++E+GP KG +
Sbjct: 676 GAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIIKEEGPRAFLKGIGPRVLW 855
Query: 82 YGAQGGCRFGLYEYFK 97
G G FG+ E K
Sbjct: 856 IGIGGSIFFGVLESTK 903
>TC227864 uncoupling protein 1a [Glycine max]
Length = 1434
Score = 42.7 bits (99), Expect = 8e-05
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Frame = +1
Query: 27 SAGTTHLATTPLDVLKVNMQVHPI----------KYYSISSCFTTLLREQGPSVLWKGWT 76
SA + T PLD KV +Q+ KY + T+ RE+G S LWKG
Sbjct: 280 SACFAEVCTIPLDTAKVRLQLQKQAVAGDVVSLPKYKGMLGTVGTIAREEGLSALWKGIV 459
Query: 77 GKFFGYGAQGGCRFGLYEYFKGVY 100
GG R GLYE K Y
Sbjct: 460 PGLHRQCLYGGLRIGLYEPVKTFY 531
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 36 TPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGA 84
+P+DV+K M + Y + CF L+ GP +KG+ F G+
Sbjct: 919 SPVDVVKSRM-MGDSSYKNTLDCFIKTLKNDGPLAFYKGFLPNFGRLGS 1062
>TC208522 similar to UP|Q6YVE7 (Q6YVE7) Mitochondrial aspartate-glutamate
carrier protein-like, partial (72%)
Length = 1068
Score = 42.7 bits (99), Expect = 8e-05
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 24 GMLSAGTTHLATTPLDVLKVNMQVHPIK--YYSISSCFTTLLREQGPSVLWKGWTGKFFG 81
G ++ T TTPLDV+K + V + Y IS C T+++E+G L+KG +
Sbjct: 374 GAVAGAVTGAVTTPLDVVKTRLMVQGSQNHYKGISDCVRTIVKEEGSHALFKGIGPRVLW 553
Query: 82 YGAQGGCRFGLYEYFKGV 99
G G F + E K +
Sbjct: 554 IGIGGSIFFCVLEKTKKI 607
>TC214634 homologue to UP|O49447 (O49447) ADP, ATP carrier-like protein,
partial (83%)
Length = 1503
Score = 40.0 bits (92), Expect = 5e-04
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Frame = +2
Query: 24 GMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQGPSVLWKG 74
G +SA + A P++ +K + Q IK Y I CFT ++++G LW+G
Sbjct: 308 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFTRTMKDEGVIALWRG 487
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVYS 101
T Y F +YFK +++
Sbjct: 488 NTANVIRYFPTQALNFAFKDYFKRLFN 568
>TC208944 similar to UP|Q9ZWG1 (Q9ZWG1) Uncoupling protein AtUCP2, partial
(38%)
Length = 609
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Frame = +3
Query: 35 TTPLDVLKVNMQVHPI----------KYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGA 84
T PLD KV +Q+ KY + T+ RE+G S LWKG
Sbjct: 168 TIPLDTAKVRLQLQKKVGVDEGVGLPKYKGLLGTVKTIAREEGISALWKGIVPGLHRQCL 347
Query: 85 QGGCRFGLYE 94
GG R GLY+
Sbjct: 348 YGGLRIGLYD 377
>TC210690 weakly similar to GB|AAP37832.1|30725620|BT008473 At4g15610
{Arabidopsis thaliana;} , partial (17%)
Length = 416
Score = 38.5 bits (88), Expect = 0.002
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Frame = +3
Query: 22 IGGMLSAGTTHLATT---PLDVLKVNMQVHPI--KYYSISSCFTTLLREQGPSVLWKGW- 75
+ G+ AG+ LAT PLD +KV +QV K + T LL G + L+ G+
Sbjct: 93 VHGIAGAGSVALATAFTYPLDTMKVLIQVGSSTGKELDHTHVLTRLLSVSGNAGLFNGFG 272
Query: 76 ---TGKFFGYGAQGGCRFGLYEYFKGVYSN 102
G+ FG GA RFG+YE Y +
Sbjct: 273 WLLVGRIFGLGA----RFGVYEILSAFYKD 350
>TC222492 weakly similar to GB|AAP37832.1|30725620|BT008473 At4g15610
{Arabidopsis thaliana;} , partial (43%)
Length = 797
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Frame = +2
Query: 22 IGGMLSAGTTHLATT---PLDVLKVNMQVHPI--KYYSISSCFTTLLREQGPSVLWKGW- 75
+ G+ AG+ LAT PLD +KV +QV K + T LL G + L+ G+
Sbjct: 77 VHGIAGAGSVALATAFTYPLDSIKVLIQVGSSTGKELDPAQALTRLLSVSGNAGLFNGFG 256
Query: 76 ---TGKFFGYGAQGGCRFGLYEYFKGVYSN 102
G+ FG GA RFG+YE Y +
Sbjct: 257 WLLAGRIFGLGA----RFGVYEILTAFYKD 334
>TC214671 homologue to UP|O49447 (O49447) ADP, ATP carrier-like protein,
partial (85%)
Length = 1562
Score = 38.1 bits (87), Expect = 0.002
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Frame = +3
Query: 24 GMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQGPSVLWKG 74
G +SA + A P++ +K + Q IK Y I CF ++++G LW+G
Sbjct: 330 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFARTMKDEGVIALWRG 509
Query: 75 WTGKFFGYGAQGGCRFGLYEYFKGVYS 101
T Y F +YFK +++
Sbjct: 510 NTANVIRYFPTQALNFAFKDYFKRLFN 590
>TC212927 similar to UP|Q9ZNY4 (Q9ZNY4) Mitochondrial energy transfer protein
precursor, partial (43%)
Length = 762
Score = 37.0 bits (84), Expect = 0.005
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 37 PLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYF 96
PL++LK + V Y ++ F +++E+GP+ L++G T G + Y+
Sbjct: 65 PLELLKTRLTVQRGVYKNLLDAFVRIIQEEGPAELYRGLTSSLIGVVPYAAANYLAYDTL 244
Query: 97 KGVY 100
+ Y
Sbjct: 245 RKAY 256
>TC214628 homologue to UP|O49875 (O49875) Adenine nucleotide translocator,
complete
Length = 1561
Score = 37.0 bits (84), Expect = 0.005
Identities = 24/95 (25%), Positives = 41/95 (42%), Gaps = 9/95 (9%)
Frame = +3
Query: 16 YYALCTIGGMLSAGTTHLATTPLDVLK--VNMQVHPIK-------YYSISSCFTTLLREQ 66
++ L + G +SA + A P++ +K + Q IK Y I CF + ++
Sbjct: 345 HFLLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTMADE 524
Query: 67 GPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYS 101
G LW+G T Y F +YFK +++
Sbjct: 525 GAISLWRGNTANVIRYFPTQALNFAFKDYFKRLFN 629
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.352 0.156 0.557
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,732,382
Number of Sequences: 63676
Number of extensions: 111763
Number of successful extensions: 1101
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of query: 170
length of database: 12,639,632
effective HSP length: 90
effective length of query: 80
effective length of database: 6,908,792
effective search space: 552703360
effective search space used: 552703360
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (22.0 bits)
S2: 55 (25.8 bits)
Medicago: description of AC127019.17