BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126786.12 + phase: 0
(451 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203876 homologue to UP|G3PB_PEA (P12859) Glyceraldehyde-3-phos... 830 0.0
TC225105 homologue to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phos... 575 e-164
TC225106 homologue to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phos... 437 e-123
TC224783 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosph... 302 2e-82
TC224561 homologue to UP|Q7FAH2 (Q7FAH2) OJ000223_09.15 protein,... 301 4e-82
BE059067 similar to GP|22240|emb|C GADPH (383 AA) {Zea mays}, pa... 222 3e-58
TC203505 homologue to UP|G3PB_PEA (P12859) Glyceraldehyde-3-phos... 219 2e-57
TC225129 similar to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phosph... 216 2e-56
AW781421 similar to PIR|B24430|B24 glyceraldehyde-3-phosphate de... 200 1e-51
TC224582 homologue to UP|G3PC_DIACA (P34921) Glyceraldehyde-3-ph... 194 9e-50
TC212434 similar to UP|G3PB_PEA (P12859) Glyceraldehyde-3-phosph... 182 3e-46
TC210911 UP|Q6HCU8 (Q6HCU8) Glyceraldehyde 3-phosphate dehydroge... 179 2e-45
BG238133 similar to PIR|T09668|T09 glyceraldehyde-3-phosphate de... 176 2e-44
TC224574 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosph... 172 2e-43
BE331150 similar to SP|P12858|G3PA Glyceraldehyde 3-phosphate de... 171 6e-43
TC225130 similar to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phosph... 169 2e-42
TC229573 homologue to UP|Q8VWN9 (Q8VWN9) Glyceraldehyde-3-phosph... 169 2e-42
TC224585 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosph... 148 4e-36
BG239137 142 3e-34
TC224565 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosph... 137 8e-33
>TC203876 homologue to UP|G3PB_PEA (P12859) Glyceraldehyde-3-phosphate
dehydrogenase B, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B) ,
complete
Length = 1741
Score = 830 bits (2143), Expect = 0.0
Identities = 413/452 (91%), Positives = 437/452 (96%), Gaps = 1/452 (0%)
Frame = +3
Query: 1 MATHAALASTRIPTSTRFPSKASHSFPTQCASKRLEVAEFSGLKSTSCITYASNARESSF 60
MATHAALASTRIPT+T+FPSKASHSFPTQCASKRLEV EFSGL+STSC+TYA++ARESSF
Sbjct: 117 MATHAALASTRIPTNTKFPSKASHSFPTQCASKRLEVTEFSGLRSTSCVTYANDARESSF 296
Query: 61 SDVVAAQLATKAIGS-TAVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVND 119
D+VA+QL K GS T VRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+VVND
Sbjct: 297 FDLVASQLTPKTNGSSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVVND 476
Query: 120 SGGVKNASHLLKYDSMLGTFKADVKILNNETITVDGKPILVVSSRDPLKLPWAELGIDIV 179
SGGVKNASHLLKYDSMLGTFKADVKIL+NETITVDGKPI VVSSRDPLKLPWAELGIDIV
Sbjct: 477 SGGVKNASHLLKYDSMLGTFKADVKILDNETITVDGKPIKVVSSRDPLKLPWAELGIDIV 656
Query: 180 IEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYGHEVADIISNASC 239
IEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNE DY H++++IISNASC
Sbjct: 657 IEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEGDYTHQISNIISNASC 836
Query: 240 TTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA 299
TTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA
Sbjct: 837 TTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA 1016
Query: 300 AKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKG 359
AKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNV KKG++AEDVNAAFRKAAEGPLKG
Sbjct: 1017AKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKG 1196
Query: 360 VLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 419
VLDVCDVPLVS+DFRC+DVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA
Sbjct: 1197VLDVCDVPLVSIDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 1376
Query: 420 NKWPGTPQAGSGDPLEDFCETNPSTDECKVFE 451
+KWPG +AGSGDPLE+FCETNP+ +ECKV+E
Sbjct: 1377SKWPGAAKAGSGDPLEEFCETNPADEECKVYE 1472
>TC225105 homologue to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phosphate
dehydrogenase A, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A) ,
partial (96%)
Length = 1580
Score = 575 bits (1482), Expect = e-164
Identities = 298/391 (76%), Positives = 332/391 (84%), Gaps = 2/391 (0%)
Frame = +2
Query: 38 AEFSGLKSTSCITYASNARESSFSDVVAAQLATKAIGSTA--VRGETVAKLKVAINGFGR 95
+EFSGL+S+S S F V+A Q T A+GS+ +G T AKLKVAINGFGR
Sbjct: 224 SEFSGLRSSSGFLPFSRKSSEDFHSVIAFQ--TYAVGSSGGYKKGVTEAKLKVAINGFGR 397
Query: 96 IGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKILNNETITVDG 155
IGRNFLRCWHGRKDSPL+VI +ND+GGVK ASHLLKYDS+LGTF ADVK + + I+VDG
Sbjct: 398 IGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSILGTFDADVKPVGSNIISVDG 577
Query: 156 KPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP 215
K I VVS R+P LPW +LGID+VIEGTGVFVD GAGKHIQAGAKKV+ITAP KG DIP
Sbjct: 578 KEIKVVSDRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIP 754
Query: 216 TYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLL 275
TYVVGVNE DY + IISNASCTTNCLAPFVK+LD++FGI+KGTMTTTHSYTGDQRLL
Sbjct: 755 TYVVGVNEYDYSPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLL 931
Query: 276 DASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNV 335
DASHRDLRRARAAALNIVPTSTGAAKAV+LVLP LKGKLNGIALRVPTPNVSVVDLVV V
Sbjct: 932 DASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQV 1111
Query: 336 AKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMV 395
+KK AE+VNAAFR++A+ L+G+L VCD PLVSVDFRCTDVSST+DSSLTMVMGDDMV
Sbjct: 1112SKKTF-AEEVNAAFRESADNELQGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMV 1288
Query: 396 KVVAWYDNEWGYSQRVVDLAHLVANKWPGTP 426
KV+AWYDNEWGYSQRVVDLA +VANKW P
Sbjct: 1289KVIAWYDNEWGYSQRVVDLADIVANKWK*EP 1381
>TC225106 homologue to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phosphate
dehydrogenase A, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A) ,
partial (73%)
Length = 1159
Score = 437 bits (1123), Expect = e-123
Identities = 223/271 (82%), Positives = 242/271 (89%)
Frame = +2
Query: 156 KPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP 215
K I VVS R+P LPW +LGID+VIEGTGVFVD GAGKHIQAGAKKV+ITAP KG DIP
Sbjct: 191 KEIKVVSDRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIP 367
Query: 216 TYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLL 275
TYVVGVNE DY + IISNASCTTNCLAPFVK+LD++FGI+KGTMTTTHSYTGDQRLL
Sbjct: 368 TYVVGVNEYDYSPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLL 544
Query: 276 DASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNV 335
DASHRDLRRARAAALNIVPTSTGAAKAV+LVLP LKGKLNGIALRVPTPNVSVVDLVV V
Sbjct: 545 DASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQV 724
Query: 336 AKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMV 395
+KK AE+VNAAFR++A+ LKG+L VCD PLVSVDFRCTDVSST+DSSLTMVMGDDMV
Sbjct: 725 SKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMV 901
Query: 396 KVVAWYDNEWGYSQRVVDLAHLVANKWPGTP 426
KV+AWYDNEWGYSQRVVDLA +VANKW P
Sbjct: 902 KVIAWYDNEWGYSQRVVDLADIVANKWK*EP 994
>TC224783 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosphate
dehydrogenase , partial (98%)
Length = 1702
Score = 302 bits (773), Expect = 2e-82
Identities = 166/342 (48%), Positives = 226/342 (65%), Gaps = 3/342 (0%)
Frame = +1
Query: 83 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKN-ASHLLKYDSMLGTFKA 141
+ K+K+ INGFGRIGR R R D +E++ VND + +++ KYDS+ G +K
Sbjct: 304 MGKVKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGHWKH 477
Query: 142 -DVKILNNETITVDGKPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 200
DV + + +T+ KP+ V R+P ++PW G DI++E TGVF D A H++ GA
Sbjct: 478 HDVTVKDEKTLLFGDKPVTVFGHRNPEEIPWGSTGADIIVESTGVFTDKDKAAAHLKGGA 657
Query: 201 KKVIITAPAKGADIPTYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKG 260
KKVII+AP+K D P +VVGVNE +Y E+ DIISNASCTTNCLAP K++++ FGIV+G
Sbjct: 658 KKVIISAPSK--DAPMFVVGVNEHEYKPEL-DIISNASCTTNCLAPLAKVINDRFGIVEG 828
Query: 261 TMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIAL 319
MTT HS T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A
Sbjct: 829 LMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAF 1008
Query: 320 RVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVS 379
RVPT +VSVVDL V + K+ S +++ A ++ +EG LKG+L + +VS DF S
Sbjct: 1009RVPTVDVSVVDLTVRLEKEA-SYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFIGDSRS 1185
Query: 380 STIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANK 421
S D+ + + + VK+V+WYDNEWGYS RV+DL VA K
Sbjct: 1186SIFDAKAGIALNKNFVKLVSWYDNEWGYSSRVIDLLVFVAKK 1311
>TC224561 homologue to UP|Q7FAH2 (Q7FAH2) OJ000223_09.15 protein, partial
(98%)
Length = 1413
Score = 301 bits (771), Expect = 4e-82
Identities = 162/339 (47%), Positives = 233/339 (67%), Gaps = 4/339 (1%)
Frame = +3
Query: 85 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKN-ASHLLKYDSMLGTFKA-D 142
K+++ INGFGRIGR R R D +E++ VND + +++ KYD++ G +K D
Sbjct: 75 KIRIGINGFGRIGRLVARVALQRND--VELVAVNDPFITTDYMTYMFKYDTVHGQWKHFD 248
Query: 143 VKILNNETITVDGKPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKK 202
VK+ +++T+ KP+ V R+P ++PW E+G D V+E TGVF D A H++ GAKK
Sbjct: 249 VKVKDSKTLLFGEKPVTVFGIRNPEEIPWGEVGADYVVESTGVFTDKDKAAAHLKGGAKK 428
Query: 203 VIITAPAKGADIPTYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTM 262
V+I+AP+K D P +VVGVNE++Y E+ DI+SNASCTTNCLAP K++++ FGIV+G M
Sbjct: 429 VVISAPSK--DAPMFVVGVNEKEYKPEL-DIVSNASCTTNCLAPLAKVINDRFGIVEGLM 599
Query: 263 TTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRV 321
TT H+ T Q+ +D S++D R RAA+ NI+P+STGAAKAV VLP L GKL G++ RV
Sbjct: 600 TTVHAITATQKTVDGPSNKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRV 779
Query: 322 PTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSST 381
PT +VSVVDL V + +K + E + AA ++ +EG LKG+L + +VS DF + SS
Sbjct: 780 PTVDVSVVDLTVRL-EKPATYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSI 956
Query: 382 IDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVA 419
D+ + + ++ VK+V+WYDNEWGYS RV+DL AH+ +
Sbjct: 957 FDAKAGISLNENFVKLVSWYDNEWGYSSRVIDLIAHIAS 1073
>BE059067 similar to GP|22240|emb|C GADPH (383 AA) {Zea mays}, partial (40%)
Length = 628
Score = 222 bits (565), Expect = 3e-58
Identities = 116/211 (54%), Positives = 152/211 (71%)
Frame = +2
Query: 117 VNDSGGVKNASHLLKYDSMLGTFKADVKILNNETITVDGKPILVVSSRDPLKLPWAELGI 176
+ND+GGVK ASHLLKYDS+LGTF ADVK + ++ I+VDGK I VVS R+P LPW +LGI
Sbjct: 2 INDTGGVKQASHLLKYDSILGTFNADVKPVGSDIISVDGKEIKVVSDRNPANLPWKDLGI 181
Query: 177 DIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYGHEVADIISN 236
++VIEGT VFV+ A KHIQAGAK V+IT P+K IPTYV+ VN+ +Y IISN
Sbjct: 182 NLVIEGTAVFVNRKSARKHIQAGAKNVLITTPSK-RYIPTYVISVNDYNYNPN-KPIISN 355
Query: 237 ASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTS 296
S TTN L P +K+L++++ I+ T+TTTHSYT Q LL H L LNI+PT+
Sbjct: 356 TSYTTNYLTPCIKVLNQKYDIINNTITTTHSYTIYQNLLYTIHHYLTHTETTTLNIIPTA 535
Query: 297 TGAAKAVSLVLPQLKGKLNGIALRVPTPNVS 327
T + K+++L+L LK KL+ +ALR+PT N+S
Sbjct: 536 T*STKSLALMLRTLKIKLHNMALRIPTRNIS 628
>TC203505 homologue to UP|G3PB_PEA (P12859) Glyceraldehyde-3-phosphate
dehydrogenase B, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B) ,
partial (24%)
Length = 508
Score = 219 bits (559), Expect = 2e-57
Identities = 101/112 (90%), Positives = 110/112 (98%)
Frame = +3
Query: 340 ISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVA 399
++AEDVNAAFRKAAEGPLKGVLDVCDVPLVS+DFRC+DVSSTIDSSLTMVMGDDMVKVVA
Sbjct: 3 LTAEDVNAAFRKAAEGPLKGVLDVCDVPLVSIDFRCSDVSSTIDSSLTMVMGDDMVKVVA 182
Query: 400 WYDNEWGYSQRVVDLAHLVANKWPGTPQAGSGDPLEDFCETNPSTDECKVFE 451
WYDNEWGYSQRVVDLAHLVA+KWPG P+AGSGDPLEDFCETNP+ +ECKV+E
Sbjct: 183 WYDNEWGYSQRVVDLAHLVASKWPGAPKAGSGDPLEDFCETNPADEECKVYE 338
>TC225129 similar to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phosphate
dehydrogenase A, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A) ,
partial (52%)
Length = 693
Score = 216 bits (550), Expect = 2e-56
Identities = 114/157 (72%), Positives = 129/157 (81%)
Frame = +1
Query: 165 DPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQ 224
+P LPW +LGID+VIEGTGVFVD GAGKHIQA AKKV+IT P KG DIPTYVVGVNE
Sbjct: 229 NPANLPWKDLGIDLVIEGTGVFVDRQGAGKHIQARAKKVLITDPGKG-DIPTYVVGVNEY 405
Query: 225 DYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRR 284
DY + II+NASCTTNCLAP+VK+L + + ++ GTMTTT SYTG+QRL+ ASHRDLRR
Sbjct: 406 DYRPD-EPIITNASCTTNCLAPYVKVLAQTYCMINGTMTTTDSYTGNQRLIYASHRDLRR 582
Query: 285 ARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRV 321
A AAALNIV TSTGAA AV+L LP L G LNGIALRV
Sbjct: 583 ATAAALNIVRTSTGAAYAVALALPTLNG*LNGIALRV 693
Score = 63.2 bits (152), Expect = 2e-10
Identities = 37/73 (50%), Positives = 44/73 (59%), Gaps = 2/73 (2%)
Frame = +2
Query: 42 GLKSTSCITYASNARESSFSDVVAAQLATKAIGSTA--VRGETVAKLKVAINGFGRIGRN 99
GL+ +S S F V+ Q T A+GS+ +G T AKLKVAING G I +N
Sbjct: 2 GLRISSGFLPFSRKSSEDFHSVITFQ--TYAVGSSGGYKKGVTEAKLKVAINGSGTIAKN 175
Query: 100 FLRCWHGRKDSPL 112
FLR WHGRKDSPL
Sbjct: 176 FLRSWHGRKDSPL 214
>AW781421 similar to PIR|B24430|B24 glyceraldehyde-3-phosphate dehydrogenase
(NADP) (phosphorylating) (EC 1.2.1.13) B chloroplast -,
partial (35%)
Length = 415
Score = 200 bits (509), Expect = 1e-51
Identities = 101/136 (74%), Positives = 112/136 (82%)
Frame = +2
Query: 99 NFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKILNNETITVDGKPI 158
N LRCW RKDSPL V+ N GG NA HLL YDS+L T ADVKIL+N+TIT DG I
Sbjct: 2 NLLRCWRRRKDSPLGVVGGNYRGGGSNA*HLLNYDSIL*TVSADVKILDNDTITGDG*SI 181
Query: 159 LVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYV 218
VVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAG+HIQ+GAK VIITAPA GAD+ TYV
Sbjct: 182 KVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGRHIQSGAKNVIITAPANGADMSTYV 361
Query: 219 VGVNEQDYGHEVADII 234
VG+NE DY HE+++II
Sbjct: 362 VGINEGDYTHEISNII 409
>TC224582 homologue to UP|G3PC_DIACA (P34921) Glyceraldehyde-3-phosphate
dehydrogenase, cytosolic , partial (58%)
Length = 971
Score = 194 bits (492), Expect = 9e-50
Identities = 100/199 (50%), Positives = 141/199 (70%), Gaps = 1/199 (0%)
Frame = +3
Query: 223 EQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDA-SHRD 281
E++Y E+ DI+SNASCTTNCLAP K++++ FGIV+G MTT H+ T Q+ +D S++D
Sbjct: 3 EKEYKPEL-DIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSNKD 179
Query: 282 LRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGIS 341
R RAA+ NI+P+STGAAKAV VLP L GKL G++ RVPT +VSVVDL V + +K +
Sbjct: 180 WRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRL-EKPAT 356
Query: 342 AEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWY 401
E + +A ++ +EG LKG+L + +VS DF + SS D+ + + D+ VK+V+WY
Sbjct: 357 YEQIKSAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGISLNDNFVKLVSWY 536
Query: 402 DNEWGYSQRVVDLAHLVAN 420
DNEWGYS RV+DL +A+
Sbjct: 537 DNEWGYSSRVIDLIVHIAS 593
>TC212434 similar to UP|G3PB_PEA (P12859) Glyceraldehyde-3-phosphate
dehydrogenase B, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B) ,
partial (28%)
Length = 752
Score = 182 bits (462), Expect = 3e-46
Identities = 94/115 (81%), Positives = 104/115 (89%)
Frame = +2
Query: 274 LLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVV 333
LL ASH DLRR+RA ALNIV T+TGAAKA+SLVLPQLK KLNGIALRVPTPNVSVVDLVV
Sbjct: 398 LLKASHCDLRRSRAVALNIVLTNTGAAKAMSLVLPQLKFKLNGIALRVPTPNVSVVDLVV 577
Query: 334 NVAKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTM 388
NV KKG++ E+VNA F+K AEG LKGVLD CDVPLVS+DFRC+DVSSTIDSSLT+
Sbjct: 578 NVEKKGLTVEEVNATFKKVAEGRLKGVLDACDVPLVSIDFRCSDVSSTIDSSLTI 742
Score = 34.3 bits (77), Expect = 0.12
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 259 KGTMTTTHSYTGDQ 272
KGTMTTTHSYTGDQ
Sbjct: 2 KGTMTTTHSYTGDQ 43
>TC210911 UP|Q6HCU8 (Q6HCU8) Glyceraldehyde 3-phosphate dehydrogenase ,
partial (54%)
Length = 604
Score = 179 bits (455), Expect = 2e-45
Identities = 94/185 (50%), Positives = 124/185 (66%)
Frame = +1
Query: 87 KVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKIL 146
+VAINGFGRIGR R K+S E++ +N S + +HL+KYD++ G F V+
Sbjct: 61 RVAINGFGRIGRMVFR--QAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAF 234
Query: 147 NNETITVDGKPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 206
+ + VDGK I ++++RDP +LPW +LG+++VIE TG F A H++AGAKKVI+T
Sbjct: 235 EDHLL-VDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILT 411
Query: 207 APAKGADIPTYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTH 266
AP K D+ T VVGVNE +ISNASCTTNCLAP VK+LDE+FGI G MTT H
Sbjct: 412 APGKNEDV-TIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVH 588
Query: 267 SYTGD 271
+YT D
Sbjct: 589 AYTND 603
>BG238133 similar to PIR|T09668|T09 glyceraldehyde-3-phosphate dehydrogenase
(NADP) (phosphorylating) (EC 1.2.1.13) precursor -
Scotch, partial (39%)
Length = 607
Score = 176 bits (446), Expect = 2e-44
Identities = 105/186 (56%), Positives = 123/186 (65%), Gaps = 2/186 (1%)
Frame = +2
Query: 38 AEFSGLKSTSCITYASNARESSFSDVVAAQLATKAIGSTAV--RGETVAKLKVAINGFGR 95
+E+SGL S+SC S R+SS D T A GS+ +G T A LKVAI G GR
Sbjct: 59 SEYSGLLSSSCCLPFS--RKSSEDDHSVIAFHTYAAGSSGGCNKGVTKATLKVAIIGLGR 232
Query: 96 IGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKILNNETITVDG 155
+GRNFLRCWHGRKD L+ I +ND+GGVK ASHLLKYD +L T AD K ++ I+VDG
Sbjct: 233 MGRNFLRCWHGRKDYSLDDIAINDTGGVKQASHLLKYD*ILLTSYADDKPAGSDIISVDG 412
Query: 156 KPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP 215
K ++VVS R P LPW + GID VIEGT V VD GA KHI GA KV+ITA G DI
Sbjct: 413 KEVIVVSDRHPANLPWKDEGID*VIEGTWVLVDR*GAAKHILTGANKVVITAAG*G-DIL 589
Query: 216 TYVVGV 221
TYV GV
Sbjct: 590 TYVGGV 607
>TC224574 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosphate
dehydrogenase , partial (51%)
Length = 932
Score = 172 bits (437), Expect = 2e-43
Identities = 90/180 (50%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
Frame = +1
Query: 243 CLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAK 301
CLAP K++++ FGIV+G MTT HS T Q+ +D S +D R RAA+ NI+P+STGAAK
Sbjct: 1 CLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAK 180
Query: 302 AVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGVL 361
AV VLP L GKL G+A RVPT +VSVVDL V + K+ S +++ A ++ +EG LKG+L
Sbjct: 181 AVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKEA-SYDEIKNAIKEESEGKLKGIL 357
Query: 362 DVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANK 421
+ +VS DF SS D+ + + + VK+V+WYDNEWGYS RV+DL VA K
Sbjct: 358 GYTEDDVVSTDFVGDSRSSIFDAKAGIALNKNFVKLVSWYDNEWGYSSRVIDLLVFVAKK 537
>BE331150 similar to SP|P12858|G3PA Glyceraldehyde 3-phosphate dehydrogenase
A chloroplast precursor (EC 1.2.1.13), partial (40%)
Length = 505
Score = 171 bits (433), Expect = 6e-43
Identities = 100/168 (59%), Positives = 116/168 (68%), Gaps = 2/168 (1%)
Frame = +2
Query: 42 GLKSTSCITYASNARESSFSDVVAAQLATKAIGSTA--VRGETVAKLKVAINGFGRIGRN 99
GL+ S S F +A Q T A+GS+ +G T AKLKVAINGFG IGRN
Sbjct: 2 GLRILSGFLPFSRGFS*DFHSAIAFQ--TYAVGSSGGYKKGVTEAKLKVAINGFGMIGRN 175
Query: 100 FLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKILNNETITVDGKPIL 159
FLRCWHG KDSPL+VI +ND+GGVK+ASHLLK DS+LGTF ADVK + ++ I+VDGK I
Sbjct: 176 FLRCWHGLKDSPLDVIAINDTGGVKHASHLLKCDSILGTFDADVKPVGSDIISVDGKEIK 355
Query: 160 VVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 207
VVS R P L +L ID VIEGTGVFVD AG HIQA A V+ITA
Sbjct: 356 VVSDRHPANLTCTDLRIDYVIEGTGVFVDLYRAGIHIQA*A**VLITA 499
>TC225130 similar to UP|G3PA_PEA (P12858) Glyceraldehyde-3-phosphate
dehydrogenase A, chloroplast precursor (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A) ,
partial (37%)
Length = 649
Score = 169 bits (428), Expect = 2e-42
Identities = 108/212 (50%), Positives = 133/212 (61%), Gaps = 2/212 (0%)
Frame = +2
Query: 60 FSDVVAAQLATKAIGSTA--VRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVV 117
F V+A Q T A+GS+ G T A +V+ GRI N LRCWHG KDSPL+VI +
Sbjct: 29 FHSVIAYQ--TYAVGSSGGYKMGVT*ALGEVS*CRIGRIVWNSLRCWHGPKDSPLDVIAI 202
Query: 118 NDSGGVKNASHLLKYDSMLGTFKADVKILNNETITVDGKPILVVSSRDPLKLPWAELGID 177
ND+GGVK A HLLKYDS+L TF ADVK + ++ I+VDGK I VS R+P LPW + GID
Sbjct: 203 NDTGGVKQAYHLLKYDSILRTFDADVKPVGSDIISVDGKEIKXVSYRNPTNLPWKDFGID 382
Query: 178 IVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYGHEVADIISNA 237
+VIE TGVFV A KHIQA +KKV+ITAP K +I TY+V VN+ DY II N
Sbjct: 383 LVIERTGVFVYIQSARKHIQARSKKVLITAPVK-RNIRTYIVDVNKCDYS-PYKPIIXNQ 556
Query: 238 SCTTNCLAPFVKILDEEFGIVKGTMTTTHSYT 269
P+ L +F +K + TTH YT
Sbjct: 557 FYPLTTFHPYSNSL-SKFLFLK-SHYTTHFYT 646
>TC229573 homologue to UP|Q8VWN9 (Q8VWN9) Glyceraldehyde-3-phosphate
dehydrogenase precursor , partial (41%)
Length = 780
Score = 169 bits (428), Expect = 2e-42
Identities = 92/167 (55%), Positives = 113/167 (67%), Gaps = 1/167 (0%)
Frame = +3
Query: 254 EFGIVKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKG 312
EFGIV+G MTT H+ T Q+ +D S +D R R AA NI+P+STGAAKAV VLP+L G
Sbjct: 3 EFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNG 182
Query: 313 KLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVD 372
KL G+A RVPTPNVSVVDL + KK S EDV AA + A+EGPLKG+L D +VS D
Sbjct: 183 KLTGMAFRVPTPNVSVVDLTCRL-KKNASYEDVKAAIKYASEGPLKGILGYTDEDVVSND 359
Query: 373 FRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 419
F SS D+ + + VK+V+WYDNEWGYS RV+DL +A
Sbjct: 360 FVGDSRSSIFDAKAGIALSASFVKLVSWYDNEWGYSNRVLDLIEHMA 500
>TC224585 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosphate
dehydrogenase , partial (46%)
Length = 873
Score = 148 bits (374), Expect = 4e-36
Identities = 80/161 (49%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Frame = +2
Query: 262 MTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALR 320
MTT HS T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A R
Sbjct: 5 MTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFR 184
Query: 321 VPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSS 380
VPT +VSVVDL V + K+ S +++ A ++ +EG LKG+L + +VS DF SS
Sbjct: 185 VPTVDVSVVDLTVRLEKEA-SYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSS 361
Query: 381 TIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANK 421
D+ + + + VK+V+WYDNEWGYS RV+DL VA K
Sbjct: 362 IFDAKAGIALNKNFVKLVSWYDNEWGYSSRVIDLLVFVAKK 484
>BG239137
Length = 322
Score = 142 bits (358), Expect = 3e-34
Identities = 75/104 (72%), Positives = 84/104 (80%)
Frame = +2
Query: 230 VADIISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAA 289
+ II A +T C A F ++LD + I+ G+MTTTHSYT DQ L DASHRDL RA+AAA
Sbjct: 8 IEPIIRTAF*STYCQASFGRVLDHKLCIMNGSMTTTHSYTVDQMLFDASHRDLTRAKAAA 187
Query: 290 LNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVV 333
LNIVPTSTGAA AV+LVLP LKGKLNGIALRVPTPNVSVVDLVV
Sbjct: 188 LNIVPTSTGAANAVALVLPTLKGKLNGIALRVPTPNVSVVDLVV 319
>TC224565 homologue to UP|Q9XG67 (Q9XG67) Glyceraldehyde-3-phosphate
dehydrogenase , partial (44%)
Length = 786
Score = 137 bits (346), Expect = 8e-33
Identities = 72/144 (50%), Positives = 98/144 (68%)
Frame = +1
Query: 278 SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAK 337
S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVPT +VSVVDL V + K
Sbjct: 37 SAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEK 216
Query: 338 KGISAEDVNAAFRKAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKV 397
+ S +++ A ++ +EG LKG+L + +VS DF + SS D+ + + + VK+
Sbjct: 217 EA-SYDEIKNAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNKNFVKL 393
Query: 398 VAWYDNEWGYSQRVVDLAHLVANK 421
V+WYDNEWGYS RV+DL +VA K
Sbjct: 394 VSWYDNEWGYSSRVIDLLVIVAKK 465
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,072,427
Number of Sequences: 63676
Number of extensions: 208704
Number of successful extensions: 1198
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of query: 451
length of database: 12,639,632
effective HSP length: 100
effective length of query: 351
effective length of database: 6,272,032
effective search space: 2201483232
effective search space used: 2201483232
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Medicago: description of AC126786.12