BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126783.5 + phase: 0
(612 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC234897 weakly similar to UP|TIR3_YEAST (P40552) Cell wall prot... 354 6e-98
TC221485 329 2e-90
TC231456 similar to UP|Q9U1G9 (Q9U1G9) Gly-rich protein, partial... 278 5e-75
TC224178 188 7e-48
TC233433 184 8e-47
BE023588 178 5e-45
BF069988 138 6e-33
TC222136 similar to UP|HMN1_DROME (P22807) Homeobox protein slou... 113 3e-25
TC209667 similar to GB|BAC22265.1|24414015|AP003803 arm repeat c... 44 2e-04
TC230034 43 4e-04
TC233876 weakly similar to UP|Q731A3 (Q731A3) Stage III sporulat... 41 0.001
TC218429 similar to GB|BAC22265.1|24414015|AP003803 arm repeat c... 40 0.003
TC218078 similar to UP|Q71VM2 (Q71VM2) Plakoglobin/armadillo/bet... 39 0.007
TC204894 similar to UP|Q94KA9 (Q94KA9) Importin alpha 2, partial... 38 0.015
TC206834 similar to UP|Q944I3 (Q944I3) AT3g01400/T13O15_4, parti... 38 0.015
TC210386 similar to UP|Q84TU4 (Q84TU4) Arm repeat-containing pro... 35 0.075
BU927238 similar to GP|24414015|dbj arm repeat containing protei... 34 0.17
TC231756 similar to UP|O60585 (O60585) Ser/Arg-related nuclear m... 34 0.22
BE805422 33 0.28
TC222489 similar to UP|Q84TU4 (Q84TU4) Arm repeat-containing pro... 33 0.37
>TC234897 weakly similar to UP|TIR3_YEAST (P40552) Cell wall protein TIR3
precursor, partial (12%)
Length = 698
Score = 354 bits (909), Expect = 6e-98
Identities = 186/232 (80%), Positives = 206/232 (88%), Gaps = 8/232 (3%)
Frame = +3
Query: 41 VWKHVERLLQMLRTLVRFA-----ATAPPPLYERPVRRVAAEAAKNLERALTLIRKCKRR 95
V KHV+RLLQMLRTLVRFA ++ PPLYERP+RRVAAEA+KNL+RAL L+RKCKRR
Sbjct: 3 VGKHVDRLLQMLRTLVRFATATSTSSVAPPLYERPIRRVAAEASKNLDRALALVRKCKRR 182
Query: 96 SILHRVVTIVTAADFRKVLVYLDASVGDMKWLLSILDVDGSG---GGGGINLSLPPIASN 152
SIL RVV+IV+AADFRKVL ++DAS GDM WLLSILD DG+G GGGGI LSLPPIASN
Sbjct: 183 SILRRVVSIVSAADFRKVLTHIDASTGDMMWLLSILDADGAGDGGGGGGIVLSLPPIASN 362
Query: 153 DPILSWVWSFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEAS 212
DPILSWVWSFIASIQMGQLND+IEA NELAS AQDN RNKKIIVEE GVPPLLKLLKE +
Sbjct: 363 DPILSWVWSFIASIQMGQLNDRIEAANELASFAQDNARNKKIIVEECGVPPLLKLLKEGT 542
Query: 213 SPAAQIAAATCLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANL 264
SP AQIAAAT LC+LANDL+R+RVIV+E GVPAVVQVL+DSP+RVQTLAANL
Sbjct: 543 SPLAQIAAATTLCHLANDLDRVRVIVSEHGVPAVVQVLSDSPMRVQTLAANL 698
>TC221485
Length = 773
Score = 329 bits (843), Expect = 2e-90
Identities = 164/206 (79%), Positives = 185/206 (89%)
Frame = +2
Query: 407 ELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAIK 466
ELQ NCLMTIMEITAAAESNADLRR AFKTNSPPAKAVVEQLLRI+KEVDSP +QIPA+K
Sbjct: 2 ELQLNCLMTIMEITAAAESNADLRRAAFKTNSPPAKAVVEQLLRIIKEVDSPALQIPAMK 181
Query: 467 SIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIEF 526
+IGSLARTFP RETRVIEPLV Q+ NR+ VADEA ALTKFASPDN+L++EHSK IIEF
Sbjct: 182 AIGSLARTFPVRETRVIEPLVTQMGNRNTEVADEAVAALTKFASPDNYLHIEHSKTIIEF 361
Query: 527 DAVPAVMKLLRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLLALEGADRTILPQHIR 586
+ +PA+M+LLRSNEV QMH LTLLCYLALHAG+SESLEQARVL LEGADRT+LPQHI+
Sbjct: 362 NGIPALMRLLRSNEVTQMHRGLTLLCYLALHAGNSESLEQARVLTVLEGADRTVLPQHIK 541
Query: 587 DLVSKAIGHLNLYHAGSHSQPLVYMP 612
+LVS+AI HLNLYHAG +SQ + Y+P
Sbjct: 542 ELVSRAIIHLNLYHAGMNSQRISYLP 619
>TC231456 similar to UP|Q9U1G9 (Q9U1G9) Gly-rich protein, partial (6%)
Length = 971
Score = 278 bits (711), Expect = 5e-75
Identities = 147/269 (54%), Positives = 194/269 (71%), Gaps = 3/269 (1%)
Frame = +1
Query: 342 TEGSSRG-GNYRKERENEDPAVKLQLKISCAEALWMLAAGSVSNSRKITETKGMLCLAKI 400
++GSSRG G +R++RE E P ++ ++K+SCA+ALW L+ G +S+ RKITETKG+LCLAKI
Sbjct: 34 SDGSSRGSGQHRRDREVESPELRNEVKVSCAKALWKLSNGCLSSCRKITETKGLLCLAKI 213
Query: 401 VEKEQGELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLM 460
+E E GELQ NC M +MEI A AESNADLRR AFK +P AKAV++QLLR+++E P +
Sbjct: 214 IESESGELQLNCFMAVMEIAAVAESNADLRRAAFKRTAPVAKAVLDQLLRVVQEESDPAL 393
Query: 461 QIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHS 520
+IPAIK+IGSLAR F + +VI PLVAQL NRD++VA EAA+AL KF PDN+ V+HS
Sbjct: 394 RIPAIKAIGSLARNFSGKVPQVIGPLVAQLGNRDVDVASEAAIALGKFVCPDNYNCVDHS 573
Query: 521 KKIIEFDAVPAVMKLLRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLLALEGADRTI 580
K I+E D +P +M LL+ N+ Q+ H L LLCYLAL+ G+S LEQ R L LE R +
Sbjct: 574 KAILELDGIPKLMSLLQINDRQQV-HGLKLLCYLALNVGNSRVLEQERALNTLERFARPV 750
Query: 581 LPQH--IRDLVSKAIGHLNLYHAGSHSQP 607
QH ++DL +KA+ + A S P
Sbjct: 751 QAQHPDLKDLFAKALHQPHSLSARSSIAP 837
>TC224178
Length = 821
Score = 188 bits (477), Expect = 7e-48
Identities = 111/259 (42%), Positives = 157/259 (59%), Gaps = 3/259 (1%)
Frame = +3
Query: 346 SRGGNYRKERENEDPAVKLQLKISCAEALWMLAAGSVSNSRKITETKGMLCLAKIVEKEQ 405
S G K RE EDP K +K A AL LA G+ + R ITE++ +LCLA ++EK
Sbjct: 24 SYSGINMKGREIEDPDNKAYMKAMAARALRQLAKGNAAICRSITESRALLCLAILLEKGT 203
Query: 406 GELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAI 465
++ N + + EITA AE +A+LRR AFK NSP KAVV+Q+L+I+++ D L+ IP +
Sbjct: 204 EDVMYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDRKLL-IPCV 380
Query: 466 KSIGSLARTFPARETRVIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIE 525
K+IG+LARTF A ETR+I PLV L R+ V+ EAA++LTK A +N+L+++HSK II
Sbjct: 381 KAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKLACSENYLHLDHSKAIIS 560
Query: 526 FDAVPAVMKLLRSNEVNQMHHALTLLCYLALHAGSSESLEQARVLLALEGADR---TILP 582
+++L+ E AL LL Y+ALH SE L +A VL LE A +
Sbjct: 561 ASGAKHLVQLVYLGEQTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKQPNLTQD 740
Query: 583 QHIRDLVSKAIGHLNLYHA 601
Q++ L+ + G L Y +
Sbjct: 741 QNLEALLQDSKGRLGAYQS 797
>TC233433
Length = 754
Score = 184 bits (468), Expect = 8e-47
Identities = 106/244 (43%), Positives = 151/244 (61%), Gaps = 1/244 (0%)
Frame = +2
Query: 322 SGTGSGSRQFANSYSSTYYYTEGSSRGGNYRKERENEDPAVKLQLKISCAEALWMLAAGS 381
+G G+ ++Q + + S G K R++EDP K +K A ALW LA G+
Sbjct: 32 NGVGNDAKQ--GNQDQNQNHQPNYSHSGINMKGRDHEDPKTKANMKEMAARALWQLAKGN 205
Query: 382 VSNSRKITETKGMLCLAKIVEKEQGELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPA 441
R ITE++ +LC A ++EK +Q N M +MEITA AE +A+LR+ AFK NSP
Sbjct: 206 SPICRSITESRALLCFAVLLEKGTEAVQYNSAMAVMEITAVAEKDAELRKSAFKPNSPAC 385
Query: 442 KAVVEQLLRILKEVDSPLMQIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDINVADEA 501
KAVV+Q+++I+++ DS L+ IP IK+IG+LARTF A ETR+I PLV L R+ V+ EA
Sbjct: 386 KAVVDQVVKIIEKADSELL-IPCIKTIGNLARTFKATETRMIGPLVKLLDEREAEVSREA 562
Query: 502 AVALTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLR-SNEVNQMHHALTLLCYLALHAGS 560
++ALTKFA +N+L+V+HSK II +++L+ E AL LL Y+A+H
Sbjct: 563 SIALTKFACTENYLHVDHSKAIIIAGGAKHLIQLVYFGGEEMVQIPALVLLSYIAMHVPD 742
Query: 561 SESL 564
SE L
Sbjct: 743 SEEL 754
>BE023588
Length = 424
Score = 178 bits (452), Expect = 5e-45
Identities = 87/139 (62%), Positives = 111/139 (79%)
Frame = +3
Query: 358 EDPAVKLQLKISCAEALWMLAAGSVSNSRKITETKGMLCLAKIVEKEQGELQRNCLMTIM 417
E P ++ ++KISCA+ALW L+ G +S+ RKITETKG+LCLAKI+E E GELQ NCLM +M
Sbjct: 6 ESPELRNEVKISCAKALWKLSKGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVM 185
Query: 418 EITAAAESNADLRRGAFKTNSPPAKAVVEQLLRILKEVDSPLMQIPAIKSIGSLARTFPA 477
EI A AESNADLRR AFK +P AKAV++QLLR+++E P ++IPAIK+IGSLAR F
Sbjct: 186 EIAAVAESNADLRRAAFKRTAPAAKAVLDQLLRVVQEESDPALRIPAIKAIGSLARNFSG 365
Query: 478 RETRVIEPLVAQLSNRDIN 496
+ +VI PLVAQL NRD++
Sbjct: 366 KVPQVIGPLVAQLGNRDVD 422
>BF069988
Length = 400
Score = 138 bits (348), Expect = 6e-33
Identities = 74/132 (56%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Frame = +3
Query: 165 SIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCL 224
++Q+GQ D+ EA EL SLA+DNDR K II++EGGV PLLKLLKEASSPAAQ+AAA L
Sbjct: 3 TLQLGQPKDRAEAATELGSLARDNDRTKFIILDEGGVMPLLKLLKEASSPAAQVAAANAL 182
Query: 225 CYLANDLER-IRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFAREN 283
+ + +R + IV VP +VQVL DSP+RV+ ANLV+ MA+ +A+E+F R N
Sbjct: 183 VNITTNQDRVVTFIVESHAVPIIVQVLGDSPMRVRVSVANLVSAMAEQHELAREEFVRAN 362
Query: 284 AIRPLVTLLSFD 295
RPLV+LLS D
Sbjct: 363 VARPLVSLLSMD 398
>TC222136 similar to UP|HMN1_DROME (P22807) Homeobox protein slou (S59/2)
(Slouch protein) (Homeobox protein NK-1), partial (3%)
Length = 562
Score = 113 bits (282), Expect = 3e-25
Identities = 64/173 (36%), Positives = 100/173 (56%), Gaps = 1/173 (0%)
Frame = +2
Query: 10 LEEELSYPILVAERIRSATEE-TDSFKLECSEVWKHVERLLQMLRTLVRFAATAPPPLYE 68
+++ L+ PI +A+++ A EE + SFK EC E+ ++L +LR AA A LYE
Sbjct: 59 VKQLLAKPIQLADQVAKAAEEASSSFKQECLELKSKADKLAALLR----LAARASSDLYE 226
Query: 69 RPVRRVAAEAAKNLERALTLIRKCKRRSILHRVVTIVTAADFRKVLVYLDASVGDMKWLL 128
RP RR+ A+ L++AL+L KC+ ++ RV +I+ A FRK+ L+ S+GD+ WLL
Sbjct: 227 RPTRRIIADTELVLDKALSLTLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLL 406
Query: 129 SILDVDGSGGGGGINLSLPPIASNDPILSWVWSFIASIQMGQLNDKIEATNEL 181
+ L LPPIA+N+PIL +W +A + G L+D+ +A L
Sbjct: 407 RV-STPAEERADTEYLGLPPIAANEPILGLIWEQVAVLHTGSLDDRSDAAASL 562
>TC209667 similar to GB|BAC22265.1|24414015|AP003803 arm repeat containing
protein homolog-like {Oryza sativa (japonica
cultivar-group);} , partial (41%)
Length = 787
Score = 44.3 bits (103), Expect = 2e-04
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +2
Query: 163 IASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAAT 222
+A G + N LA + + K+ IVEEGG+ LL+ +++ S + A T
Sbjct: 305 VAEEGSGMAEKAMVVLNSLAGI----EEGKEAIVEEGGIGALLEAIEDGSVKGKEFAVLT 472
Query: 223 CLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVA--RMAKHD 272
+ A+ + ++V E G+P +V + ++ +R + A L+ R ++H+
Sbjct: 473 LVQLCAHSVANRALLVREGGIPPLVALSQNTSVRAKLKAETLLGYLRESRHE 628
Score = 38.5 bits (88), Expect = 0.009
Identities = 31/114 (27%), Positives = 57/114 (49%), Gaps = 6/114 (5%)
Frame = +2
Query: 120 SVGDMKWLLSILDVDGSGGGGGINLSLPPIAS----NDPILS--WVWSFIASIQMGQLND 173
S G ++ L+ ++ +GSG + L +A + I+ + + + +I+ G +
Sbjct: 272 SAGAVRPLVELVAEEGSGMAEKAMVVLNSLAGIEEGKEAIVEEGGIGALLEAIEDGSVKG 451
Query: 174 KIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYL 227
K A L L + N+ ++V EGG+PPL+ L + +S A++ A T L YL
Sbjct: 452 KEFAVLTLVQLCAHSVANRALLVREGGIPPLV-ALSQNTSVRAKLKAETLLGYL 610
>TC230034
Length = 916
Score = 43.1 bits (100), Expect = 4e-04
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +1
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNE 240
L +LA N+RNK IV +G +PPL++LLK +S ++A A L L+ +I
Sbjct: 370 LLNLAVRNERNKVKIVTDGAMPPLVELLKMQNSGIRELATAAILT-LSAAASNKPIIAAS 546
Query: 241 VGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQE-DFARENAIRPLVTLL 292
P +VQ+L ++ + A + ++ +A + +A+ PL+ LL
Sbjct: 547 GAAPLLVQILKSGSVQGKVDAVTALHNLS--TSIANSIELLDASAVFPLLNLL 699
Score = 39.3 bits (90), Expect = 0.005
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Frame = +1
Query: 94 RRSILHRVVTIVTAADFRKVLVYLDASVGDMKWLLSILDVDGSGG---GGGINLSLPPIA 150
R+S L ++ + + KV + D G M L+ +L + SG L+L A
Sbjct: 349 RQSSLLALLNLAVRNERNKVKIVTD---GAMPPLVELLKMQNSGIRELATAAILTLSAAA 519
Query: 151 SNDPILSWVWS---FIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKL 207
SN PI++ + + ++ G + K++A L +L+ + N +++ V PLL L
Sbjct: 520 SNKPIIAASGAAPLLVQILKSGSVQGKVDAVTALHNLST-SIANSIELLDASAVFPLLNL 696
Query: 208 LKEASSPAAQIAAATCLCYLANDLE--RIRVIVNEVGVPAVVQVLADSPI 255
LKE + AT L + ++ E R + + + G+ +V+ + D +
Sbjct: 697 LKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVEDGSL 846
Score = 29.6 bits (65), Expect = 4.1
Identities = 26/95 (27%), Positives = 44/95 (45%)
Frame = +1
Query: 482 VIEPLVAQLSNRDINVADEAAVALTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLRSNEV 541
VIEPLV LS+ +++ + +AL A + + KI+ A+P +++LL+
Sbjct: 301 VIEPLVLMLSSSNLDARQSSLLALLNLAVRNE----RNKVKIVTDGAMPPLVELLKMQ-- 462
Query: 542 NQMHHALTLLCYLALHAGSSESLEQARVLLALEGA 576
N L L L A +S + ++A GA
Sbjct: 463 NSGIRELATAAILTLSAAASN-----KPIIAASGA 552
>TC233876 weakly similar to UP|Q731A3 (Q731A3) Stage III sporulation protein
AD, partial (17%)
Length = 459
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/52 (38%), Positives = 34/52 (64%)
Frame = +2
Query: 6 EAKRLEEELSYPILVAERIRSATEETDSFKLECSEVWKHVERLLQMLRTLVR 57
E K L +EL PIL+ ER+ +E +S K++C+E+ + V+ + LR++VR
Sbjct: 266 EEKSLRDELLGPILLGERVIKLAQEAESPKVDCTELARKVQVVCDNLRSVVR 421
>TC218429 similar to GB|BAC22265.1|24414015|AP003803 arm repeat containing
protein homolog-like {Oryza sativa (japonica
cultivar-group);} , partial (39%)
Length = 985
Score = 40.0 bits (92), Expect = 0.003
Identities = 34/114 (29%), Positives = 55/114 (47%), Gaps = 6/114 (5%)
Frame = +3
Query: 120 SVGDMKWLLSILDVDGSGGGGGINLSLPPIAS----NDPILS--WVWSFIASIQMGQLND 173
S G +K L+ ++ GSG + L +A + I+ + + + +I+ G +
Sbjct: 222 SAGAVKPLVELVAEQGSGMAEKAMVVLNSLAGIQEGKNAIVEEGGIAALVEAIEDGSVKG 401
Query: 174 KIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYL 227
K A L L D+ RN+ +V EGG+PPL+ L + S A+ A T L YL
Sbjct: 402 KEFAVLTLLQLCVDSVRNRGFLVREGGIPPLV-ALSQTGSVRAKHKAETLLRYL 560
Score = 38.9 bits (89), Expect = 0.007
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +3
Query: 163 IASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAAT 222
+A G + N LA + + K IVEEGG+ L++ +++ S + A T
Sbjct: 255 VAEQGSGMAEKAMVVLNSLAGIQE----GKNAIVEEGGIAALVEAIEDGSVKGKEFAVLT 422
Query: 223 CLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLV 265
L + + +V E G+P +V + +R + A L+
Sbjct: 423 LLQLCVDSVRNRGFLVREGGIPPLVALSQTGSVRAKHKAETLL 551
>TC218078 similar to UP|Q71VM2 (Q71VM2)
Plakoglobin/armadillo/beta-catenin-like protein
(Fragment), partial (88%)
Length = 1310
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/92 (28%), Positives = 48/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNE 240
L +LA +++NK IVE G + P++ LK + + A A+ L A+ + I++
Sbjct: 351 LLNLAVKDEKNKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTN--KPIISA 524
Query: 241 VGV-PAVVQVLADSPIRVQTLAANLVARMAKH 271
GV P +VQ+L D + + A ++ ++ H
Sbjct: 525 CGVIPLLVQILRDGSHQAKADAVMALSNLSTH 620
>TC204894 similar to UP|Q94KA9 (Q94KA9) Importin alpha 2, partial (95%)
Length = 2332
Score = 37.7 bits (86), Expect = 0.015
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Frame = +2
Query: 401 VEKEQGELQRNCLMTIMEITAAAESNADLRRGAFKTNSPPAK---AVVEQLLRILKEV-- 455
V+ ++G +R M + ES RR F+ PA ++VE+ L L +
Sbjct: 224 VDADEGRRRREDTMVEIRKNRREESLQKKRREGFQPQQIPASVHSSLVEKKLEHLPSMVT 403
Query: 456 ----DSPLMQIPA---IKSIGSLARTFPARE---TRVIEPLVAQLSNRDI-NVADEAAVA 504
D +Q+ A + + S+ R+ P E T V+ V L D + EAA A
Sbjct: 404 GVWTDDNNLQLEATTQFRKLLSIERSPPIEEVIQTGVVSRFVEFLMREDFPQLQFEAAWA 583
Query: 505 LTKFASPDNFLYVEHSKKIIEFDAVPAVMKLLRS 538
LT AS + E++K +I+ AVP +KLL S
Sbjct: 584 LTNIASGTS----ENTKVVIDHGAVPIFVKLLAS 673
>TC206834 similar to UP|Q944I3 (Q944I3) AT3g01400/T13O15_4, partial (89%)
Length = 1740
Score = 37.7 bits (86), Expect = 0.015
Identities = 35/144 (24%), Positives = 67/144 (46%)
Frame = +3
Query: 163 IASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAAT 222
++ ++ G K +A+ L SL + NK V+ G + L++L+ + S +A
Sbjct: 615 VSLLESGGFRAKKDASTALYSLCTVKE-NKIRAVKAGIMKVLVELMADFESNMVDKSAYV 791
Query: 223 CLCYLANDLERIRVIVNEVGVPAVVQVLADSPIRVQTLAANLVARMAKHDPVAQEDFARE 282
+A R+ +V E GVP +V+++ R + + ++ ++ + + ARE
Sbjct: 792 VSVLVAVPEARV-ALVEEGGVPVLVEIVEVGTQRQKEIVVVILLQVCEDSVAYRTMVARE 968
Query: 283 NAIRPLVTLLSFDTAVDEQTSIHS 306
AI PLV+L T +Q + S
Sbjct: 969 GAIPPLVSLSQSGTNRAKQKVLFS 1040
>TC210386 similar to UP|Q84TU4 (Q84TU4) Arm repeat-containing protein,
partial (13%)
Length = 653
Score = 35.4 bits (80), Expect = 0.075
Identities = 19/56 (33%), Positives = 28/56 (49%)
Frame = +1
Query: 166 IQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAA 221
I+ G K A L L DN R ++++EG VPPL+ L + + A + A A
Sbjct: 85 IESGSARGKENAAAALLHLCSDNHRYLNMVLQEGAVPPLVALSQSGTPRAKEKALA 252
Score = 33.1 bits (74), Expect = 0.37
Identities = 22/85 (25%), Positives = 45/85 (52%)
Frame = +1
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRVIVNE 240
LA+LA + K I ++GG+P L+++++ S+ + AAA L +++ + +++ E
Sbjct: 7 LANLATIPE-GKTAIGQQGGIPVLVEVIESGSARGKENAAAALLHLCSDNHRYLNMVLQE 183
Query: 241 VGVPAVVQVLADSPIRVQTLAANLV 265
VP +V + R + A L+
Sbjct: 184 GAVPPLVALSQSGTPRAKEKALALL 258
>BU927238 similar to GP|24414015|dbj arm repeat containing protein
homolog-like {Oryza sativa (japonica cultivar-group)},
partial (11%)
Length = 404
Score = 34.3 bits (77), Expect = 0.17
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 181 LASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYL 227
L L + N+ ++V EGG+PPL+ L + A S A++ A T L YL
Sbjct: 79 LVQLCAHSVANRALLVREGGIPPLVALSQNA-SVRAKLKAETLLGYL 216
>TC231756 similar to UP|O60585 (O60585) Ser/Arg-related nuclear matrix
protein, partial (4%)
Length = 864
Score = 33.9 bits (76), Expect = 0.22
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 177 ATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLANDLERIRV 236
A + + +LA +N K + +EGG+PPL LL+ A + + AA + E
Sbjct: 601 AADAITNLAHENSSIKTRVRKEGGIPPLGHLLEFADTKVQRAAAGALRTLAFKNDENKNQ 780
Query: 237 IVNEVGVPAVVQVL 250
IV +P ++ +L
Sbjct: 781 IVECNALPTLILML 822
>BE805422
Length = 420
Score = 33.5 bits (75), Expect = 0.28
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 169 GQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQIAAATCLCYLA 228
G + K A L L D+ N+ +V EGG+PPL+ L + S+ A + T + L
Sbjct: 1 GSVKGKEFAVLTLLQLCVDSVINRGFLVREGGIPPLVALSQTGSARAKHKVSHTLIKPLF 180
Query: 229 NDLERIRVIV 238
+ + +I+
Sbjct: 181 DHTNKPHIII 210
>TC222489 similar to UP|Q84TU4 (Q84TU4) Arm repeat-containing protein,
partial (7%)
Length = 654
Score = 33.1 bits (74), Expect = 0.37
Identities = 17/57 (29%), Positives = 31/57 (53%)
Frame = +1
Query: 161 SFIASIQMGQLNDKIEATNELASLAQDNDRNKKIIVEEGGVPPLLKLLKEASSPAAQ 217
S + ++ G L K A + L L N + ++++EG VPPL+ L ++ +P A+
Sbjct: 4 SLVEIVESGSLRGKENAASILLQLCLHNQKFCTLVLQEGAVPPLV-ALSQSGTPRAK 171
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,187,844
Number of Sequences: 63676
Number of extensions: 282000
Number of successful extensions: 1639
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of query: 612
length of database: 12,639,632
effective HSP length: 103
effective length of query: 509
effective length of database: 6,081,004
effective search space: 3095231036
effective search space used: 3095231036
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC126783.5