BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126019.3 + phase: 0
(219 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC225700 similar to UP|V722_ARATH (P47192) Vesicle-associated me... 392 e-110
TC225699 similar to UP|V722_ARATH (P47192) Vesicle-associated me... 391 e-109
TC228574 similar to UP|Q84SZ1 (Q84SZ1) Synaptobrevin-like protei... 367 e-102
TC225269 similar to UP|Q84SZ1 (Q84SZ1) Synaptobrevin-like protei... 365 e-102
TC225266 similar to UP|Q84SZ1 (Q84SZ1) Synaptobrevin-like protei... 259 1e-97
TC217572 homologue to UP|V724_ARATH (O23429) Vesicle-associated ... 332 6e-92
TC225268 similar to UP|V722_ARATH (P47192) Vesicle-associated me... 324 2e-89
TC207792 similar to UP|V727_ARATH (Q9M376) Vesicle-associated me... 176 1e-61
AI966662 similar to SP|P47192|V722 Vesicle-associated membrane p... 194 3e-50
TC207791 similar to UP|V727_ARATH (Q9M376) Vesicle-associated me... 170 5e-43
TC223014 similar to UP|V725_ARATH (O48850) Vesicle-associated me... 164 4e-41
CA852038 similar to SP|Q9M376|V727 Vesicle-associated membrane p... 143 2e-40
TC217573 similar to UP|V724_ARATH (O23429) Vesicle-associated me... 158 2e-39
TC205374 similar to UP|V714_ARATH (Q9FMR5) Vesicle-associated me... 153 5e-38
TC209397 similar to UP|V711_ARATH (O49377) Vesicle-associated me... 107 3e-24
TC225276 similar to UP|Q7X9C5 (Q7X9C5) Synptobrevin-related prot... 103 6e-23
TC221123 weakly similar to UP|V713_ARATH (Q9LFP1) Vesicle-associ... 98 3e-21
TC205375 similar to GB|AAM51590.1|21436025|AY116956 AT5g22360/MW... 84 5e-17
BF067750 similar to GP|29150380|gb| synaptobrevin-like protein {... 82 1e-16
BE800658 76 1e-14
>TC225700 similar to UP|V722_ARATH (P47192) Vesicle-associated membrane
protein 722 (AtVAMP722) (Synaptobrevin-related protein
1), complete
Length = 1191
Score = 392 bits (1006), Expect = e-110
Identities = 189/219 (86%), Positives = 210/219 (95%)
Frame = +1
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
MGQQSLIYSFVARGTVILAEY++FTGNFT +A QCLQKLP+SNN+FTYNCDGHTF++LVD
Sbjct: 178 MGQQSLIYSFVARGTVILAEYTEFTGNFTGVAAQCLQKLPSSNNKFTYNCDGHTFNYLVD 357
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
NGFTYCVVAVES GRQIPIAFLERIK+DF K+Y GG+A TA A+SLN+EFGPKLKEQMQY
Sbjct: 358 NGFTYCVVAVESAGRQIPIAFLERIKEDFTKKYAGGKAATAAAQSLNREFGPKLKEQMQY 537
Query: 121 CVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQG 180
CV+HPEE+SKLAKVKAQVSEVKGVMMENI+KV+DRGEKIE+LVDKTENLRSQAQDFRQQG
Sbjct: 538 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQG 717
Query: 181 TQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
T++RRKMW+QNMKIKLIVL IIIALILIIVLSVC GF+C
Sbjct: 718 TKIRRKMWFQNMKIKLIVLGIIIALILIIVLSVCGGFNC 834
>TC225699 similar to UP|V722_ARATH (P47192) Vesicle-associated membrane
protein 722 (AtVAMP722) (Synaptobrevin-related protein
1), complete
Length = 1345
Score = 391 bits (1004), Expect = e-109
Identities = 188/219 (85%), Positives = 210/219 (95%)
Frame = +1
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
MGQQSLIYSFVARGTVILAEY++FTGNFT++A QCLQKLP+SNN+FTYNCDGHTF++LVD
Sbjct: 193 MGQQSLIYSFVARGTVILAEYTEFTGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLVD 372
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
NGFTYCVVAVES GRQIPIAFLERIK+DF K+Y GG+A TA A SLN+EFGPKLKE+MQY
Sbjct: 373 NGFTYCVVAVESAGRQIPIAFLERIKEDFTKKYAGGKAATAAAHSLNREFGPKLKEEMQY 552
Query: 121 CVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQG 180
CV+HPEE+SKLAKVKAQVSEVKGVMMENI+KV+DRGEKIE+LVDKTENLRSQAQDFRQQG
Sbjct: 553 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQG 732
Query: 181 TQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
T++RRKMW+QNMKIKLIVL IIIALILIIVLSVC GF+C
Sbjct: 733 TKIRRKMWFQNMKIKLIVLGIIIALILIIVLSVCGGFNC 849
>TC228574 similar to UP|Q84SZ1 (Q84SZ1) Synaptobrevin-like protein, complete
Length = 976
Score = 367 bits (943), Expect = e-102
Identities = 176/217 (81%), Positives = 199/217 (91%)
Frame = +1
Query: 3 QQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVDNG 62
Q+SLIY+FV+RGTVILAEY++F+GNF TIA QCLQKLPASNN+FTYNCDGHTF++LVDNG
Sbjct: 163 QRSLIYAFVSRGTVILAEYTEFSGNFNTIAFQCLQKLPASNNKFTYNCDGHTFNYLVDNG 342
Query: 63 FTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQYCV 122
FTYCVVA ES+GRQ+P+AFLER+KDDF +YGGG+A T A SLNKEFG KLKE MQYCV
Sbjct: 343 FTYCVVADESIGRQVPVAFLERVKDDFVAKYGGGKAATVAANSLNKEFGSKLKEHMQYCV 522
Query: 123 EHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQGTQ 182
EHPEE+SKLAKVKAQVSEVK VMMENI+KV+DRGEKIE+LVDKTENL QAQDFR GT+
Sbjct: 523 EHPEEISKLAKVKAQVSEVKDVMMENIEKVLDRGEKIELLVDKTENLHHQAQDFRNSGTK 702
Query: 183 LRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
+RRKMW QNMKIKLIVLAI+IALILIIVLSVC GF+C
Sbjct: 703 IRRKMWLQNMKIKLIVLAILIALILIIVLSVCRGFNC 813
>TC225269 similar to UP|Q84SZ1 (Q84SZ1) Synaptobrevin-like protein, complete
Length = 1129
Score = 365 bits (937), Expect = e-102
Identities = 172/219 (78%), Positives = 203/219 (92%)
Frame = +1
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
MGQ+SLIY+FV+RGTVILAEY++F+GNF +IA QCLQKLPA+NN+FTYNCD HTF++LVD
Sbjct: 292 MGQKSLIYAFVSRGTVILAEYTEFSGNFNSIAFQCLQKLPATNNKFTYNCDAHTFNYLVD 471
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
NG+TYCVVA ES+GRQ+P+AFLER+KD+F +YGGG+A TA A SLNKEFGPKL+E MQY
Sbjct: 472 NGYTYCVVADESIGRQLPMAFLERVKDEFVAKYGGGKAATAPANSLNKEFGPKLREHMQY 651
Query: 121 CVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQG 180
CV+HPEE+SKLAKVKAQVSEVKGVMMENI+KV+DRG+KIE+LVDKTENL +QAQDFR G
Sbjct: 652 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGDKIELLVDKTENLHNQAQDFRTSG 831
Query: 181 TQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
T++RRKMW QNMKIKLIVL I+IALILIIVLSVC GF+C
Sbjct: 832 TRIRRKMWLQNMKIKLIVLGILIALILIIVLSVCRGFNC 948
>TC225266 similar to UP|Q84SZ1 (Q84SZ1) Synaptobrevin-like protein, complete
Length = 1085
Score = 259 bits (661), Expect(2) = 1e-97
Identities = 119/152 (78%), Positives = 142/152 (93%)
Frame = +2
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
MGQ+SLIY+FV+RGTVILAEY++F+GNF +IA QCLQKLPA+NN+FTYNCD HTF++LVD
Sbjct: 227 MGQKSLIYAFVSRGTVILAEYTEFSGNFNSIAFQCLQKLPATNNKFTYNCDAHTFNYLVD 406
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
NG+TYCVVA ES+GRQ+P+AFLER+KD+F +YGGG+A TA A SLNKEFGPKL+E MQY
Sbjct: 407 NGYTYCVVADESIGRQLPMAFLERVKDEFVSKYGGGKAATAPANSLNKEFGPKLREHMQY 586
Query: 121 CVEHPEEVSKLAKVKAQVSEVKGVMMENIDKV 152
CV+HPEE+SKLAKVKAQVSEVKGVMMENI+KV
Sbjct: 587 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKV 682
Score = 115 bits (287), Expect(2) = 1e-97
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +3
Query: 144 VMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQGTQLRRKMWYQNMKIKLIVLAIII 203
++ E KV+DRG+KIE+LVDKTENL +QAQDFR GT++RRKMW QNMKIKLIVL I+I
Sbjct: 711 LLAEMYIKVLDRGDKIELLVDKTENLHNQAQDFRTSGTRIRRKMWLQNMKIKLIVLGILI 890
Query: 204 ALILIIVLSVCHGFSC 219
ALILIIVLSVC GF+C
Sbjct: 891 ALILIIVLSVCRGFNC 938
>TC217572 homologue to UP|V724_ARATH (O23429) Vesicle-associated membrane
protein 724 (AtVAMP724) (SYBL1-like protein), complete
Length = 1012
Score = 332 bits (852), Expect = 6e-92
Identities = 154/219 (70%), Positives = 187/219 (85%)
Frame = +2
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
M Q+S IYSFVARGT++LAEY++FTGNF IA QCLQKLP+SNN+FTYNCD HTF+FLV+
Sbjct: 53 MSQESFIYSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYNCDHHTFNFLVE 232
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
+G+ YCVVA ESV +QI IAFLER+K DF KRYGGG+A TA AKSLNKEFGP +KE M+Y
Sbjct: 233 DGYAYCVVAKESVSKQISIAFLERVKADFKKRYGGGKADTAVAKSLNKEFGPVMKEHMKY 412
Query: 121 CVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQG 180
++H EE+ KL KVKAQVSEVK +M+ENIDK IDRGE + +L DKTE SQAQ+F++QG
Sbjct: 413 IIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTILADKTETXHSQAQEFKKQG 592
Query: 181 TQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
T +RRKMWYQNMKIKL+VL I++ L+L+I LSVCHGF+C
Sbjct: 593 THVRRKMWYQNMKIKLVVLGILLLLVLVIWLSVCHGFNC 709
>TC225268 similar to UP|V722_ARATH (P47192) Vesicle-associated membrane
protein 722 (AtVAMP722) (Synaptobrevin-related protein
1), partial (92%)
Length = 978
Score = 324 bits (830), Expect = 2e-89
Identities = 156/210 (74%), Positives = 184/210 (87%)
Frame = +2
Query: 10 FVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVDNGFTYCVVA 69
FV+RG VILAEY +F+GNF +IA QCLQKLPA+NN+FTY D HTF++LVDNG+
Sbjct: 2 FVSRGXVILAEYXEFSGNFNSIAFQCLQKLPATNNKFTYXXDAHTFNYLVDNGYN----- 166
Query: 70 VESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQYCVEHPEEVS 129
ES+GRQ+P+AFLER+KD+F +YGGG+A TA A SLNKEFGPKL+E MQYCV+HPEE+S
Sbjct: 167 -ESIGRQLPMAFLERVKDEFVSKYGGGKAATAPANSLNKEFGPKLREHMQYCVDHPEEIS 343
Query: 130 KLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQGTQLRRKMWY 189
KLAKVKAQVSEVKGVMMENI+KV+DRG+KIE+LVDKTENL +QAQDFR GT++RRKMW
Sbjct: 344 KLAKVKAQVSEVKGVMMENIEKVLDRGDKIELLVDKTENLHNQAQDFRTSGTRIRRKMWL 523
Query: 190 QNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
QNMKIKLIVL I+IALILIIVLSVC GF+C
Sbjct: 524 QNMKIKLIVLGILIALILIIVLSVCRGFNC 613
>TC207792 similar to UP|V727_ARATH (Q9M376) Vesicle-associated membrane
protein 727 (AtVAMP727), partial (88%)
Length = 812
Score = 176 bits (447), Expect(2) = 1e-61
Identities = 87/162 (53%), Positives = 114/162 (69%), Gaps = 19/162 (11%)
Frame = +2
Query: 77 IPIAFLERIKDDFNKRYGGGRATTAT-------------------AKSLNKEFGPKLKEQ 117
+P FLER+KDDF KRYG A +L++EFGP LKE
Sbjct: 152 VPFVFLERVKDDFMKRYGASIKNDGAHPLADDEDDDDLFEDRFSIAYNLDREFGPALKEH 331
Query: 118 MQYCVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFR 177
MQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NI+KV+DRGEKIE+LVDKTENL+ QA F+
Sbjct: 332 MQYCMNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQ 511
Query: 178 QQGTQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
+QG QLRRKMW QN+++KL+V I+ LI+I+ + C GF C
Sbjct: 512 RQGRQLRRKMWLQNLQMKLMVGGGILILIIILWVIACRGFKC 637
Score = 77.4 bits (189), Expect(2) = 1e-61
Identities = 30/48 (62%), Positives = 45/48 (93%)
Frame = +3
Query: 16 VILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVDNGF 63
V+LAE++ +TGNF+TIA+QCLQKLP++++++TY+CDGHTF+ +DNGF
Sbjct: 3 VVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNXXLDNGF 146
>AI966662 similar to SP|P47192|V722 Vesicle-associated membrane protein 722
(AtVAMP722) (Synaptobrevin- related protein 1)., partial
(64%)
Length = 436
Score = 194 bits (492), Expect = 3e-50
Identities = 99/145 (68%), Positives = 114/145 (78%)
Frame = +2
Query: 75 RQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQYCVEHPEEVSKLAKV 134
R P+AFLER D+F +YGGG+A TA SLNKEFGPKLKE MQ+CV+HPEE+SKLAK
Sbjct: 2 RPPPMAFLERDTDEFVAKYGGGKAVTAPENSLNKEFGPKLKEHMQHCVDHPEEISKLAKA 181
Query: 135 KAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQGTQLRRKMWYQNMKI 194
KA V GV M N+ KV+DR +KIE+LVDKTENL +QAQDF GT LRRKMW NMKI
Sbjct: 182 KAYVLAASGV*MANMVKVLDRHDKIELLVDKTENLYNQAQDFTAAGTILRRKMWLHNMKI 361
Query: 195 KLIVLAIIIALILIIVLSVCHGFSC 219
KLIVL I+IALILI+VLSVC G +C
Sbjct: 362 KLIVL*ILIALILIVVLSVCRGLNC 436
>TC207791 similar to UP|V727_ARATH (Q9M376) Vesicle-associated membrane
protein 727 (AtVAMP727), partial (71%)
Length = 1055
Score = 170 bits (430), Expect = 5e-43
Identities = 91/219 (41%), Positives = 131/219 (59%)
Frame = +2
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
M Q+ LIYSFVA+GTV+LAE++ +TGNF+TIA+QCLQKLP++++++TY+CDGHTF+FL+D
Sbjct: 266 MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 445
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
NGF + VVA ES+GR +P FLER+KDDF KRYG +K +
Sbjct: 446 NGFVFLVVADESIGRSVPFVFLERVKDDFMKRYGA-----------------SIKNDGAH 574
Query: 121 CVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQG 180
+ E+ L + + ++ N+D F++QG
Sbjct: 575 PLADDEDDDDLFEDRFSIA-------YNLD------------------------SFQRQG 661
Query: 181 TQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
QLRRKMW QN+++KL+V I+ LI+I+ + C GF C
Sbjct: 662 RQLRRKMWLQNLQMKLMVGGGILILIIILWVIACGGFKC 778
>TC223014 similar to UP|V725_ARATH (O48850) Vesicle-associated membrane
protein 725 (AtVAMP725), partial (77%)
Length = 539
Score = 164 bits (414), Expect = 4e-41
Identities = 88/130 (67%), Positives = 103/130 (78%)
Frame = +3
Query: 40 PASNNRFTYNCDGHTFSFLVDNGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRAT 99
P +N T T S ++D+ YCVVAVESVGRQ+ +A+LERI +DF+KRYGGG+AT
Sbjct: 150 PTTNAPTTPMATPSTTSPIMDS--PYCVVAVESVGRQLAMAYLERIMEDFSKRYGGGKAT 323
Query: 100 TATAKSLNKEFGPKLKEQMQYCVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKI 159
TATAKSLNKEFG KLKE MQYCVEHPEEVSKLAKVKAQVSEV+ VM NID +DR KI
Sbjct: 324 TATAKSLNKEFGSKLKEHMQYCVEHPEEVSKLAKVKAQVSEVQQVMRANIDXGLDRQVKI 503
Query: 160 EVLVDKTENL 169
+VLV +TE+L
Sbjct: 504 DVLVGQTEDL 533
Score = 105 bits (261), Expect = 2e-23
Identities = 47/64 (73%), Positives = 58/64 (90%)
Frame = +2
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
MGQQSLIYSF+ARGT+ILAE++DF+GNF +ALQCLQ+LPAS+N+ TYN DGHTF++L
Sbjct: 26 MGQQSLIYSFMARGTMILAEHTDFSGNFAEVALQCLQRLPASDNKCTYNADGHTFNYLTY 205
Query: 61 NGFT 64
NGFT
Sbjct: 206NGFT 217
>CA852038 similar to SP|Q9M376|V727 Vesicle-associated membrane protein 727
(AtVAMP727). [Mouse-ear cress] {Arabidopsis thaliana},
partial (62%)
Length = 790
Score = 143 bits (360), Expect(2) = 2e-40
Identities = 62/94 (65%), Positives = 83/94 (87%)
Frame = +1
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60
M Q+ LIYSFVA+GTV+LAE++ +TGNF+TIA+QCLQKLP++++++TY+CDGHTF+FL+D
Sbjct: 127 MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 306
Query: 61 NGFTYCVVAVESVGRQIPIAFLERIKDDFNKRYG 94
NGF + VVA ES+GR +P FLER+KDDF KR G
Sbjct: 307 NGFVFLVVADESIGRSVPFVFLERVKDDFMKRCG 408
Score = 40.0 bits (92), Expect(2) = 2e-40
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 103 AKSLNKEFGPKLKEQMQYCVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKI 159
A +L++EFGP LKE MQYC+ H + + +S+ G +I KV+DRG ++
Sbjct: 489 AYNLDREFGPALKEHMQYCMNHQKNE*PIKMELK*LSQ--GDNDGHIGKVLDRGRRL 653
>TC217573 similar to UP|V724_ARATH (O23429) Vesicle-associated membrane
protein 724 (AtVAMP724) (SYBL1-like protein), partial
(50%)
Length = 1151
Score = 158 bits (400), Expect = 2e-39
Identities = 73/111 (65%), Positives = 91/111 (81%)
Frame = +3
Query: 109 EFGPKLKEQMQYCVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTEN 168
E P +KE M+Y + H EE+ KL KVKAQVSEVK +M+ENIDK IDRGE + +L DKTE
Sbjct: 3 EXXPVMKEXMKYIIXHAEEIEKLIKVKAQVSEVKSIMLENIDKXIDRGEXLTILADKTEX 182
Query: 169 LRSQAQDFRQQGTQLRRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFSC 219
L SQAQ+F++QGT +RRKMWYQNMKIKL+VL I++ L+L+I LSVCHGF+C
Sbjct: 183 LHSQAQEFKKQGTHVRRKMWYQNMKIKLVVLGILLLLVLVIWLSVCHGFNC 335
>TC205374 similar to UP|V714_ARATH (Q9FMR5) Vesicle-associated membrane
protein 714 (AtVAMP714), partial (98%)
Length = 1159
Score = 153 bits (387), Expect = 5e-38
Identities = 79/215 (36%), Positives = 137/215 (62%), Gaps = 1/215 (0%)
Frame = +1
Query: 5 SLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPA-SNNRFTYNCDGHTFSFLVDNGF 63
++ Y+ VARGTV+LAE+S TGN ++ + L+KLPA S++R ++ D + F L +G
Sbjct: 112 AIFYALVARGTVVLAEFSAVTGNTGAVSRRILEKLPAESDSRLCFSQDRYIFHILRSDGI 291
Query: 64 TYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQYCVE 123
TY +A ++ GR+IP ++LE I+ F K Y A A A ++N EF L +QM++
Sbjct: 292 TYVCMANDTFGRRIPFSYLEDIQMRFMKNYSRV-ANYAPAYAMNDEFSRVLHQQMEFFSS 468
Query: 124 HPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQGTQL 183
+ L +V+ +V E++ +M++NI+K+++RG++IE+LVDKT ++ A FR+Q +L
Sbjct: 469 NTS-ADTLNRVRGEVGEIRTIMVDNIEKILERGDRIELLVDKTATMQDSAFHFRKQSKRL 645
Query: 184 RRKMWYQNMKIKLIVLAIIIALILIIVLSVCHGFS 218
RR +W +N K+ ++ I+ ++ +I+ + C G S
Sbjct: 646 RRALWMKNFKLLALLTCFIVIVLYLIIAACCGGIS 750
>TC209397 similar to UP|V711_ARATH (O49377) Vesicle-associated membrane
protein 711 (AtVAMP711) (v-SNARE synaptobrevin 7C)
(AtVAMP7C), partial (69%)
Length = 520
Score = 107 bits (268), Expect = 3e-24
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +2
Query: 3 QQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNN-RFTYNCDGHTFSFLVDN 61
+ ++Y+ V RG+V+LAE+S T N + IA Q L+K+P +N+ +Y+ D + F +
Sbjct: 62 RMGILYALVGRGSVVLAEFSGTTTNASAIARQILEKIPGNNDTHVSYSQDRYIFHVKRTD 241
Query: 62 GFTYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQYC 121
G T +A ++ GR+IP AFLE I F + YG +A +N+EF L +QM+Y
Sbjct: 242 GLTVLCMADDTAGRRIPFAFLEDIHQKFVRTYGRA-VHSAQPYGMNEEFSRVLSQQMEYY 418
Query: 122 VEHPEEVSKLAKVKAQVSEVKGVMMENIDKVIDRG 156
P ++ ++K ++S+V+ VM+ENIDKV+DRG
Sbjct: 419 SSDP-NADRINRLKGEMSQVRNVMIENIDKVLDRG 520
>TC225276 similar to UP|Q7X9C5 (Q7X9C5) Synptobrevin-related protein
(Fragment), partial (30%)
Length = 421
Score = 103 bits (257), Expect = 6e-23
Identities = 45/59 (76%), Positives = 56/59 (94%)
Frame = +1
Query: 1 MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLV 59
MGQ+SLIY+FV+RGTVILAEY++F+GNF +IA QCLQKLPA+NN+FTYNCD HTF++LV
Sbjct: 169 MGQKSLIYAFVSRGTVILAEYTEFSGNFNSIAFQCLQKLPATNNKFTYNCDAHTFNYLV 345
>TC221123 weakly similar to UP|V713_ARATH (Q9LFP1) Vesicle-associated
membrane protein 713 (AtVAMP713), partial (65%)
Length = 660
Score = 98.2 bits (243), Expect = 3e-21
Identities = 47/139 (33%), Positives = 87/139 (61%)
Frame = +1
Query: 78 PIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQYCVEHPEEVSKLAKVKAQ 137
P AFLE I F K Y +A A ++N EF L +QM+Y P +L ++K +
Sbjct: 148 PFAFLEDIHKKFVKTYARA-ILSAPAYAMNDEFSRVLNQQMEYYSNDPN-ADRLNRLKGE 321
Query: 138 VSEVKGVMMENIDKVIDRGEKIEVLVDKTENLRSQAQDFRQQGTQLRRKMWYQNMKIKLI 197
+++V+ VM++NIDKV++RG ++E+LV+KT + S + F++Q + + +W+ N+++ +
Sbjct: 322 MTQVRTVMIDNIDKVLERGGRLELLVEKTSAMNSNSIRFKRQSRRYKNNLWWSNVRLTVA 501
Query: 198 VLAIIIALILIIVLSVCHG 216
++ I + ++ II+ +CHG
Sbjct: 502 LVIIFVIVVYIILAFICHG 558
>TC205375 similar to GB|AAM51590.1|21436025|AY116956 AT5g22360/MWD9_16
{Arabidopsis thaliana;} , partial (91%)
Length = 525
Score = 84.0 bits (206), Expect = 5e-17
Identities = 47/117 (40%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Frame = +1
Query: 5 SLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPA-SNNRFTYNCDGHTFSFLVDNGF 63
++ Y+ VARGTV+LAE+S TGN ++ + L+KLPA S++R ++ D + F L +G
Sbjct: 142 AIFYALVARGTVVLAEFSAVTGNTGAVSRRILEKLPAESDSRLCFSQDRYIFHILRSDGI 321
Query: 64 TYCVVAVESVGRQIPIAFLERIKDDFNKRYGGGRATTATAKSLNKEFGPKLKEQMQY 120
TY +A ++ GR+IP ++LE I+ F K Y A A A ++N EF L +QM++
Sbjct: 322 TYVCMANDTFGRRIPFSYLEDIQMRFMKNY-SRVANYAPAYAMNDEFSRVLHQQMEF 489
>BF067750 similar to GP|29150380|gb| synaptobrevin-like protein {Oryza
sativa (japonica cultivar-group)}, partial (24%)
Length = 160
Score = 82.4 bits (202), Expect = 1e-16
Identities = 36/53 (67%), Positives = 46/53 (85%)
Frame = +2
Query: 2 GQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHT 54
GQ+SLIY+FV+RGT+ILAEY+ F+ NF +IA QCL+ L A+NN+FTYNCD HT
Sbjct: 2 GQKSLIYAFVSRGTLILAEYTQFSVNFNSIAFQCLETLHATNNKFTYNCDAHT 160
>BE800658
Length = 256
Score = 76.3 bits (186), Expect = 1e-14
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +2
Query: 4 QSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVDNGF 63
+SLIY+ + T +L +Y+ GNF I LQ L LPA+NN TYN + HTF++L+ + +
Sbjct: 2 KSLIYTLRSAKT*MLTKYTKCRGNFNCITLQYLHXLPATNNIVTYNYNTHTFNYLMRDEY 181
Query: 64 TYCVVAVESVGRQIPIAFLERIKDD 88
TYC A +S+GRQ + LE IKD+
Sbjct: 182TYCGSADKSMGRQWRMTLLEHIKDE 256
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.323 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,048,251
Number of Sequences: 63676
Number of extensions: 88647
Number of successful extensions: 592
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of query: 219
length of database: 12,639,632
effective HSP length: 93
effective length of query: 126
effective length of database: 6,717,764
effective search space: 846438264
effective search space used: 846438264
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Medicago: description of AC126019.3