BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126019.13 - phase: 0
(367 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219906 homologue to UP|Q9M4G1 (Q9M4G1) Dof zinc finger protein... 255 2e-68
TC212701 similar to UP|Q76KV2 (Q76KV2) DNA binding with one fing... 186 1e-47
TC221762 homologue to UP|Q76KV0 (Q76KV0) DNA binding with one fi... 132 2e-31
TC222381 similar to UP|Q76KV2 (Q76KV2) DNA binding with one fing... 132 3e-31
TC230109 homologue to UP|Q8LDR0 (Q8LDR0) Zinc finger protein OBP... 131 5e-31
TC218726 similar to UP|O82027 (O82027) Dof zinc finger protein (... 129 2e-30
TC213102 homologue to UP|O82155 (O82155) Dof zinc finger protein... 125 2e-29
TC221022 similar to UP|Q43575 (Q43575) Zn finger protein (Fragme... 124 7e-29
TC229486 similar to UP|Q76KV2 (Q76KV2) DNA binding with one fing... 124 7e-29
TC208897 similar to UP|Q9SXG8 (Q9SXG8) Dof zinc finger protein, ... 124 9e-29
TC230594 homologue to UP|Q8LDR0 (Q8LDR0) Zinc finger protein OBP... 123 1e-28
CA800125 similar to PIR|T02370|T023 finger protein BBF1.1 - comm... 122 3e-28
BE611146 similar to GP|2262110|gb|A zinc finger protein isolog {... 121 4e-28
TC210192 similar to UP|Q9SSY7 (Q9SSY7) Elicitor-responsive Dof p... 120 1e-27
BI969322 119 2e-27
TC219921 similar to UP|DAG2_ARATH (Q9ZPY0) DOF zinc finger prote... 117 6e-27
TC218900 similar to UP|Q9FZA4 (Q9FZA4) F3H9.4 protein, partial (... 116 2e-26
BM094932 116 2e-26
BG881300 similar to GP|21538793|emb dof zinc finger protein {Hor... 115 4e-26
BG352565 114 5e-26
>TC219906 homologue to UP|Q9M4G1 (Q9M4G1) Dof zinc finger protein, partial
(25%)
Length = 1451
Score = 255 bits (652), Expect = 2e-68
Identities = 166/359 (46%), Positives = 212/359 (58%), Gaps = 2/359 (0%)
Frame = +1
Query: 6 ILFSNFLPFCLCC-LLLQQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSI 64
++FS+FL F L LQQ NH Q NGG SQ L P QPH GGS GSI
Sbjct: 169 LIFSSFLSFPFVLDLFLQQPNHPQASNNGGDNSQLL-------PPLPPHQPHVGGSVGSI 327
Query: 65 RPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGA 124
RPGSM+DRAR+A +P PE ALKCPRC+STNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGA
Sbjct: 328 RPGSMADRARLAKIPPPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGA 507
Query: 125 LRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGL 184
LRNVPVGGG RRNK++ +S +KSPASS++QT S ST++ S H +++G
Sbjct: 508 LRNVPVGGGCRRNKKNKRS-----RSKSPASSEKQTLS-GSTSATPSGGTTH---ELVGQ 660
Query: 185 TPQMSSLRFMTPLHHNFSNPNDF-VGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGL 243
PQ +L FM L N N + VG LGL G ++G + GNS + G+
Sbjct: 661 LPQPPNLPFMASL----QNLNRYAVGNMGLGLR---EIHGQNENMGFQI-GNSSDAGGGM 816
Query: 244 EQWRMPMSMTHQQHQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMT 303
+QWR+ Q PFL E T++ YPF QN + T G+ I+T+ ++
Sbjct: 817 DQWRI--------QQVPFLNGFESTSAGSYPF----QNEGIETPSGFGGD--IATNSRVS 954
Query: 304 QLASVKMEDSINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSAANWTDHVSGFSSSSNT 362
Q+ SVKME S G L ++ S N ++ ++ + +WTD +SG +SSS T
Sbjct: 955 QMPSVKMEQS---GALNLSRSTLNVSENTQYY------------SWTD-MSGLASSSAT 1083
>TC212701 similar to UP|Q76KV2 (Q76KV2) DNA binding with one finger 2
protein, partial (8%)
Length = 959
Score = 186 bits (472), Expect = 1e-47
Identities = 126/267 (47%), Positives = 167/267 (62%), Gaps = 22/267 (8%)
Frame = +2
Query: 123 GALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADIL 182
G LRNVPVGGG RRNKRS SS++ +T+SPA+SDRQT SA S ++ + +++ A +
Sbjct: 2 GTLRNVPVGGGCRRNKRSRGSSSS--NTRSPANSDRQTASAGSASTTSGSSSADLVASLG 175
Query: 183 GLTPQMSSLRFMTPLHHNFSNPNDFVGGGDLGLNYGFSY------MGGVGDL-----GSA 231
G T SLRFM PLH + + GGG++GL+YG +Y MGG+GDL G+
Sbjct: 176 GGTGVPPSLRFMAPLHQLGDHHHLGGGGGEIGLSYGLNYGAISGPMGGIGDLNFHIGGTL 355
Query: 232 LGGNSILSSSGLEQWRMPMSMTHQQHQFPFLANLEGTNSN-LYPFEGNVQNHEMITSGGY 290
GG S+L SGL+QWR+P Q HQFPFL+ LE T+S+ LYPFEG S GY
Sbjct: 356 SGGGSML--SGLDQWRVP-----QTHQFPFLSGLEATSSHGLYPFEG------ASGSDGY 496
Query: 291 -VRPKVISTSGIMTQLASVKMEDS---------INRGFLGINTSNNNSNQGSEQFWNSAV 340
P +STSGIM+QLASVKMED+ + R FLG+N +N N+N EQ+W+
Sbjct: 497 GGTPIKVSTSGIMSQLASVKMEDNRHHHHQELGLPRQFLGVN-NNPNTN---EQYWSGG- 661
Query: 341 VTGNSAANWTDHVSGFSSSSNTTSNQM 367
G + + WTD +S FSSSS T++N +
Sbjct: 662 --GGATSTWTD-LSAFSSSSTTSNNAL 733
>TC221762 homologue to UP|Q76KV0 (Q76KV0) DNA binding with one finger 4
protein, partial (19%)
Length = 472
Score = 132 bits (332), Expect = 2e-31
Identities = 57/96 (59%), Positives = 73/96 (75%)
Frame = +1
Query: 67 GSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALR 126
G + ++ + + ALKCPRCES+NTKFCY+NNYSLSQPRHFCK C+RYWTRGG LR
Sbjct: 91 GRVMEKPSQDLLQQQQQALKCPRCESSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLR 270
Query: 127 NVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGS 162
NVPVGGG R+NKR + +N+G+S+ S A+S + S
Sbjct: 271 NVPVGGGCRKNKRVKRPTNHGDSSSSAANSPSSSNS 378
>TC222381 similar to UP|Q76KV2 (Q76KV2) DNA binding with one finger 2
protein, partial (36%)
Length = 485
Score = 132 bits (331), Expect = 3e-31
Identities = 62/107 (57%), Positives = 74/107 (68%)
Frame = +1
Query: 48 PQQSQSQPHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQ 107
P Q Q S ++ S + + R P PE ALKCPRC+STNTKFCY+NNYSLSQ
Sbjct: 46 PSSGQHQQMSSQSLENMLACSKAHQERKPT-PQPEQALKCPRCDSTNTKFCYYNNYSLSQ 222
Query: 108 PRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPA 154
PR+FCK+CRRYWT+GG LRNVPVGGG R+NKRSS SS+ + A
Sbjct: 223 PRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSTSKRVQDQA 363
>TC230109 homologue to UP|Q8LDR0 (Q8LDR0) Zinc finger protein OBP4-like,
partial (27%)
Length = 696
Score = 131 bits (329), Expect = 5e-31
Identities = 70/151 (46%), Positives = 91/151 (59%), Gaps = 19/151 (12%)
Frame = +2
Query: 49 QQSQSQPHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQP 108
QQ S P G +GS GS R R + + ALKCPRC+S NTKFCY+NNY+LSQP
Sbjct: 137 QQIHSMPGGRFFSGS---GSADRRLRPHHQN--QQALKCPRCDSLNTKFCYYNNYNLSQP 301
Query: 109 RHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSK-------------------SSNNGNS 149
RHFCK CRRYWT+GG LRNVPVGGG R++KRSSK +NN NS
Sbjct: 302 RHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSSKPNKITPSETASPPPPPHPDHNNNSNS 481
Query: 150 TKSPASSDRQTGSASSTNSITSNNNIHSSAD 180
S SS +A++T ++++ ++S ++
Sbjct: 482 HSSSESSSLTAAAATTTEAVSAPETLNSDSN 574
>TC218726 similar to UP|O82027 (O82027) Dof zinc finger protein (Fragment),
partial (35%)
Length = 1153
Score = 129 bits (324), Expect = 2e-30
Identities = 108/345 (31%), Positives = 144/345 (41%), Gaps = 20/345 (5%)
Frame = +2
Query: 20 LLQQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMP 79
LL+ + Q G V Q + ++ PPP P + RAR P
Sbjct: 83 LLKSMDTAQWAQGIGVVKQPMEGSKPPPPPP---------------PPMLERRAR----P 205
Query: 80 MPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKR 139
+ AL CPRC STNTKFCY+NNYSLSQPR+FCKTCRRYWT GG+LRNVPVGGG R+NKR
Sbjct: 206 QKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKR 385
Query: 140 SSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMTPLHH 199
S+ + S +P + + S + + IH D L P
Sbjct: 386 STPPA--PPSAPAPTKKLSDLATPNFPQSASQDPKIHQGQD----------LNLAYPPAE 529
Query: 200 NFSNPNDFV--------GGGDLGLNYGFSYMGGVGDLGSALGGNSIL-------SSSGLE 244
++S + F+ G GL+ + S L +L SS GL
Sbjct: 530 DYSTVSKFIEVPYSTELDKGTTGLHQNPTSSSTTTSASSQLSAMELLKTGIAAASSRGLN 709
Query: 245 QWRMPMSMTHQQHQFPF--LANLEGTNSNLYPFEGNVQNHEMITSG--GYVRPKVISTSG 300
+ M M + H FP G N +L FE + I G G R +
Sbjct: 710 SF---MPMYNSTHGFPLQDFKPPHGLNFSLEGFENGYGGLQGIQEGPTGGARILFPTVED 880
Query: 301 IMTQLASVKMEDSINRGFLGINTSNNNSNQGSEQ-FWNSAVVTGN 344
+ Q+ S D NR S +GS +WN + G+
Sbjct: 881 LKQQVPSTNEFDQQNR-----------SQEGSAHGYWNGMLGGGS 982
>TC213102 homologue to UP|O82155 (O82155) Dof zinc finger protein, partial
(34%)
Length = 451
Score = 125 bits (315), Expect = 2e-29
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +1
Query: 85 LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSS 144
LKCPRC+STNTKFCY+NNY+LSQPRHFCK CRRYWT+GGALRN+PVGGG R+N + S SS
Sbjct: 55 LKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSS 234
Query: 145 NNGNSTKSPA 154
NN SP+
Sbjct: 235 NNNTKHASPS 264
>TC221022 similar to UP|Q43575 (Q43575) Zn finger protein (Fragment), partial
(85%)
Length = 576
Score = 124 bits (311), Expect = 7e-29
Identities = 56/88 (63%), Positives = 70/88 (78%), Gaps = 1/88 (1%)
Frame = +3
Query: 79 PMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNK 138
P + ALKCPRC+ST+TKFCY+NNYSLSQPR+FCKTCRRYWT+GG LRN+PVGGG R+NK
Sbjct: 225 PPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 404
Query: 139 R-SSKSSNNGNSTKSPASSDRQTGSASS 165
+ S+K SNN + + +S Q +SS
Sbjct: 405 KVSAKKSNNDHQLVNNNNSPTQPPPSSS 488
>TC229486 similar to UP|Q76KV2 (Q76KV2) DNA binding with one finger 2
protein, partial (21%)
Length = 1297
Score = 124 bits (311), Expect = 7e-29
Identities = 100/331 (30%), Positives = 146/331 (43%), Gaps = 7/331 (2%)
Frame = +1
Query: 31 GNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRC 90
G GG V LL TP P S + S + + A A L+CPRC
Sbjct: 58 GGGGGV---LLPITTPSPSSFPSSTTSDVTLTSTTTTAATTAATAATTTTAVENLRCPRC 228
Query: 91 ESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNST 150
+S+NTKFCY+NNY+L+QPRHFCKTCRRYWT+GGALRNVP+GGG R+NK +S+ T
Sbjct: 229 DSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSIGVASSVAGKT 408
Query: 151 KSPASSDRQTGSASSTNSITSNNNIH-------SSADILGLTPQMSSLRFMTPLHHNFSN 203
AS+ +T ++ S IL +PQ + L + N
Sbjct: 409 ---ASTKMKTIASEFGKSPGFGGGFEVEHELPPPPGQILWGSPQNTHLLALLRATQT-QN 576
Query: 204 PNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQQHQFPFLA 263
PN + L + +G + L N++LS L + Q P
Sbjct: 577 PNP--NPSPMSLKEEGTLLGHMVSTDQPLVSNTLLSYRTLGYDAVA--------QVPSSL 726
Query: 264 NLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMEDSINRGFLGINT 323
L G N+ + +GG++ + + SGI ++ ++N +
Sbjct: 727 GLFGRNN----------QDQQQQNGGFLVGEHHNNSGIQELYQKLRSSSTVNNNY----C 864
Query: 324 SNNNSNQGSEQFWNSAVVTGNSAANWTDHVS 354
S+NNS+Q + GN A+N++ VS
Sbjct: 865 SDNNSSQ---------MFMGNMASNYSSSVS 930
>TC208897 similar to UP|Q9SXG8 (Q9SXG8) Dof zinc finger protein, partial
(25%)
Length = 1067
Score = 124 bits (310), Expect = 9e-29
Identities = 59/123 (47%), Positives = 77/123 (61%)
Frame = +1
Query: 81 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRS 140
P+ L CPRC STNTKFCY+NNYSL+QPR+FCKTCRRYWT GG+LRNVPVGGG R+NK+
Sbjct: 109 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKV 288
Query: 141 SKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMTPLHHN 200
S ++++ +S K P + S+ S S + +H D+ P M P +
Sbjct: 289 SVTASSSSSPKVPDLNPPINLSSVSAISSQNPKIMHGGQDLNLAFPAMEKYHHGMPPYVE 468
Query: 201 FSN 203
N
Sbjct: 469 MQN 477
>TC230594 homologue to UP|Q8LDR0 (Q8LDR0) Zinc finger protein OBP4-like,
partial (24%)
Length = 928
Score = 123 bits (308), Expect = 1e-28
Identities = 60/129 (46%), Positives = 78/129 (59%)
Frame = +3
Query: 57 GGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCR 116
GGG +RP + + +KCPRC+S NTKFCY+NNY+LSQPRHFCK CR
Sbjct: 264 GGGGDRRLRPHHQNHHQ--------QPPIKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCR 419
Query: 117 RYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIH 176
RYWT+GG LRNVP GGG R++KRS+K T +A++T+S +NNN
Sbjct: 420 RYWTKGGVLRNVPFGGGCRKSKRSNKPKTT-------------TSAAATTSSNNNNNNPS 560
Query: 177 SSADILGLT 185
SS++ T
Sbjct: 561 SSSETAAAT 587
>CA800125 similar to PIR|T02370|T023 finger protein BBF1.1 - common tobacco
(fragment), partial (30%)
Length = 406
Score = 122 bits (305), Expect = 3e-28
Identities = 57/87 (65%), Positives = 64/87 (73%)
Frame = +1
Query: 54 QPHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCK 113
QP G + P + RAR P + AL CPRC STNTKFCY+NNYSLSQPR+FCK
Sbjct: 157 QPTMEGGSKPPPPPMLERRAR----PQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCK 324
Query: 114 TCRRYWTRGGALRNVPVGGGFRRNKRS 140
TCRRYWT GG+LRNVPVGGG R+NKRS
Sbjct: 325 TCRRYWTEGGSLRNVPVGGGSRKNKRS 405
>BE611146 similar to GP|2262110|gb|A zinc finger protein isolog {Arabidopsis
thaliana}, partial (26%)
Length = 424
Score = 121 bits (304), Expect = 4e-28
Identities = 54/79 (68%), Positives = 60/79 (75%), Gaps = 7/79 (8%)
Frame = +1
Query: 79 PMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNK 138
P E A+ CPRC S NTKFCY+NNYSL+QPR+FCKTCRRYWT GG LRN+PVGGG R+NK
Sbjct: 181 PQKEQAINCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNK 360
Query: 139 RSS-------KSSNNGNST 150
RSS S NN NST
Sbjct: 361 RSSASCSTPNNSHNNNNST 417
>TC210192 similar to UP|Q9SSY7 (Q9SSY7) Elicitor-responsive Dof protein ERDP,
partial (24%)
Length = 1070
Score = 120 bits (300), Expect = 1e-27
Identities = 59/106 (55%), Positives = 71/106 (66%)
Frame = +3
Query: 69 MSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNV 128
M + R P E A CPRC STNTKFCY+NNYSLSQPR+FCK CRRYWT+GG+LRNV
Sbjct: 201 MEEHQRSRWKPSVEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNV 380
Query: 129 PVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNN 174
PVGGG R+N+R KS + +S + ASS + SS + NN
Sbjct: 381 PVGGGCRKNRR-GKSLQSSSSRQQRASSFVSGDTESSFSDAQQINN 515
>BI969322
Length = 650
Score = 119 bits (298), Expect = 2e-27
Identities = 59/135 (43%), Positives = 73/135 (53%)
Frame = +3
Query: 22 QQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMPMP 81
Q+ +Q G G ++ +Q Q PPPQQ Q
Sbjct: 153 QRDKDMEQEGEKGREEKRQIQQQQPPPQQHQ----------------------------- 245
Query: 82 ETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSS 141
KCPRC+S NTKFCYFNNYSLSQPRHFCK C+RYWT GG RN+PVGGG R+ KR
Sbjct: 246 ----KCPRCDSMNTKFCYFNNYSLSQPRHFCKACKRYWTLGGTFRNIPVGGGSRKVKRGK 413
Query: 142 KSSNNGNSTKSPASS 156
+S + +S+ S S+
Sbjct: 414 TNSPSSSSSSSSCSN 458
>TC219921 similar to UP|DAG2_ARATH (Q9ZPY0) DOF zinc finger protein DAG2 (Dof
affecting germination 2), partial (23%)
Length = 876
Score = 117 bits (294), Expect = 6e-27
Identities = 55/93 (59%), Positives = 64/93 (68%)
Frame = +1
Query: 81 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRS 140
P+ L CPRC STNTKFCY+NNYSL+QPR+ CKTCRRYWT GG+LRNVPVGGG R+NKR
Sbjct: 106 PQEQLNCPRCSSTNTKFCYYNNYSLTQPRYICKTCRRYWTEGGSLRNVPVGGGSRKNKR- 282
Query: 141 SKSSNNGNSTKSPASSDRQTGSASSTNSITSNN 173
T S D S SS ++I+S N
Sbjct: 283 --------VTSSKVPPDLNPPSLSSVSAISSQN 357
>TC218900 similar to UP|Q9FZA4 (Q9FZA4) F3H9.4 protein, partial (18%)
Length = 693
Score = 116 bits (290), Expect = 2e-26
Identities = 61/145 (42%), Positives = 83/145 (57%)
Frame = +1
Query: 74 RMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 133
R P LKCPRC+S NTKFCY+NNY+ SQPRH+C+ C+R+WT+GG LRNVPVGGG
Sbjct: 19 RKQQQTQPSEPLKCPRCDSINTKFCYYNNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGG 198
Query: 134 FRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRF 193
R+NKR KS+ +T S ++S T +A+ + + I S A T S ++
Sbjct: 199 -RKNKRVKKSTTPAIATTSISTS---TSNANMDGELNNPITIPSLAVDDHKTTPSSLYQY 366
Query: 194 MTPLHHNFSNPNDFVGGGDLGLNYG 218
+ N + D G D G+ G
Sbjct: 367 VCLPQQNLMSTKDSEEGKDFGIGNG 441
>BM094932
Length = 412
Score = 116 bits (290), Expect = 2e-26
Identities = 50/87 (57%), Positives = 63/87 (71%)
Frame = +2
Query: 85 LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSS 144
L+CPRC S NTKFCY+NNY+LSQPRHFCK CRRYWT+GGALRN+PVGGG R K + +SS
Sbjct: 23 LQCPRCNSNNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSR--KTTKRSS 196
Query: 145 NNGNSTKSPASSDRQTGSASSTNSITS 171
+ + +P+SS T + T+
Sbjct: 197 STSKRSSAPSSSSSAVSDPDPTRNCTN 277
>BG881300 similar to GP|21538793|emb dof zinc finger protein {Hordeum vulgare
subsp. vulgare}, partial (33%)
Length = 394
Score = 115 bits (287), Expect = 4e-26
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +3
Query: 85 LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSS 144
L+CPRC+S+NTKFCY+NNY+L+QPRHFCKTCRRYWT+GGALRNVP+GGG R++K S S+
Sbjct: 135 LRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKSSGMSN 314
Query: 145 NNGNST 150
+ T
Sbjct: 315 SVAKQT 332
>BG352565
Length = 259
Score = 114 bits (286), Expect = 5e-26
Identities = 59/96 (61%), Positives = 62/96 (64%)
Frame = +2
Query: 25 NHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMPMPETA 84
N HQ G S QLL PPQ PH G G R G M+DRA++ P E
Sbjct: 2 NQHQANGIN---SPQLLSPLPQPPQA----PHVGVEAGQTRSGPMADRAKI---PAQEGV 151
Query: 85 LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWT 120
LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWT
Sbjct: 152 LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWT 259
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,545,901
Number of Sequences: 63676
Number of extensions: 320096
Number of successful extensions: 2279
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2252
length of query: 367
length of database: 12,639,632
effective HSP length: 99
effective length of query: 268
effective length of database: 6,335,708
effective search space: 1697969744
effective search space used: 1697969744
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Medicago: description of AC126019.13