BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126014.9 + phase: 0
(233 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC231002 similar to UP|Q9LPU4 (Q9LPU4) T22I11.8, partial (21%) 281 1e-76
AW397529 194 2e-50
BG363063 123 2e-45
TC233059 similar to UP|Q9LPU4 (Q9LPU4) T22I11.8, partial (19%) 132 2e-31
CD410836 108 2e-24
TC221987 nodulin 58 4e-09
TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall pr... 44 5e-05
TC203324 similar to UP|Q9S728 (Q9S728) En/Spm-like transposon pr... 44 6e-05
TC203730 similar to UP|Q9S728 (Q9S728) En/Spm-like transposon pr... 44 6e-05
BI315914 similar to PIR|T09854|T098 proline-rich cell wall prote... 44 6e-05
TC209672 similar to GB|AAM19966.1|20466089|AY098956 At2g32600/T2... 43 1e-04
TC206122 weakly similar to PIR|C86473|C86473 arabinogalactan-pro... 43 1e-04
TC208362 weakly similar to UP|O64835 (O64835) Expressed protein ... 42 2e-04
TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein pr... 42 2e-04
TC226353 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial ... 41 5e-04
TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich prote... 41 5e-04
TC219909 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-... 40 7e-04
TC218114 similar to UP|BCP_PEA (Q41001) Blue copper protein prec... 40 0.001
AW620463 40 0.001
BI317298 similar to GP|5139695|dbj| expressed in cucumber hypoco... 40 0.001
>TC231002 similar to UP|Q9LPU4 (Q9LPU4) T22I11.8, partial (21%)
Length = 854
Score = 281 bits (720), Expect = 1e-76
Identities = 151/206 (73%), Positives = 165/206 (79%), Gaps = 4/206 (1%)
Frame = +2
Query: 19 SHSTTILVDGSSEWKNPTVSIGDSITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPST 78
+HSTTILVDGSSEWK+PTVSIGDSI FKHKQ+YNLYIFKN+KAF LCN TQA LL++P
Sbjct: 8 AHSTTILVDGSSEWKSPTVSIGDSIIFKHKQHYNLYIFKNEKAFKLCNITQATLLSNP-- 181
Query: 79 TSCSYTWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSG 138
YTWHPSR GFFYFTF N SLKACQDSQKLAI+V + A APE SP+ TP PSSG
Sbjct: 182 ----YTWHPSRPGFFYFTFHNGSLKACQDSQKLAIEVA-SSAMAPE-HSPV-ATPAPSSG 340
Query: 139 GDIQSSPSFPWPFHPHQ-GSSPGPAP--TPEASSPITVPLVPYKGSGDGMPFINSNPAVP 195
G++ SSPSFPWPF P Q SSPGPAP +A SP+T+PLVP KG GMPFINSNPAVP
Sbjct: 341 GEVPSSPSFPWPFRPGQEASSPGPAPQAQAQAGSPVTIPLVPDKGG--GMPFINSNPAVP 514
Query: 196 LPTGEVDSATIHPL-ATSGHQGQVPI 220
LPTGEVDSATI PL TSGHQ QV I
Sbjct: 515 LPTGEVDSATIRPLPITSGHQEQVMI 592
>AW397529
Length = 409
Score = 194 bits (494), Expect = 2e-50
Identities = 103/145 (71%), Positives = 112/145 (77%)
Frame = +2
Query: 1 MSLPIFFYFLILSLFFKLSHSTTILVDGSSEWKNPTVSIGDSITFKHKQNYNLYIFKNQK 60
M PI F FL+ SLF K S+S TILVDGSSEWKNPTVSIGDSI FKHKQ+YNLYIFKN+K
Sbjct: 17 MHFPILFLFLLPSLF-KFSYSATILVDGSSEWKNPTVSIGDSIIFKHKQHYNLYIFKNEK 193
Query: 61 AFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKA 120
AF LCN TQA LLT+P YTWHPSR GFFYFTF N SLKACQDSQKLAI+VT + A
Sbjct: 194 AFKLCNITQATLLTNP------YTWHPSRPGFFYFTFHNGSLKACQDSQKLAIEVT-SSA 352
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSP 145
APE S P PSSGG++ SSP
Sbjct: 353 MAPEVS------PAPSSGGEVPSSP 409
>BG363063
Length = 474
Score = 123 bits (308), Expect(2) = 2e-45
Identities = 61/78 (78%), Positives = 67/78 (85%)
Frame = +3
Query: 1 MSLPIFFYFLILSLFFKLSHSTTILVDGSSEWKNPTVSIGDSITFKHKQNYNLYIFKNQK 60
M PI F FL+ SLF KLSHSTTILVDGSSEWK+PTVSIGDSI FKHKQ+YNLYIFKN+K
Sbjct: 33 MHFPILFLFLLPSLF-KLSHSTTILVDGSSEWKSPTVSIGDSIIFKHKQHYNLYIFKNEK 209
Query: 61 AFNLCNFTQANLLTDPST 78
AF LCN TQA LL++P T
Sbjct: 210 AFKLCNITQATLLSNPFT 263
Score = 77.0 bits (188), Expect(2) = 2e-45
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 83 YTWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDI 141
+ WHPSR GFFYFTF N SLKACQDSQKLAI+V + A APE SP+ TP PSSGG++
Sbjct: 302 FQWHPSRPGFFYFTFHNGSLKACQDSQKLAIEVA-SSAMAPE-HSPV-ATPAPSSGGEV 469
>TC233059 similar to UP|Q9LPU4 (Q9LPU4) T22I11.8, partial (19%)
Length = 650
Score = 132 bits (331), Expect = 2e-31
Identities = 80/138 (57%), Positives = 98/138 (70%), Gaps = 4/138 (2%)
Frame = +2
Query: 87 PSRVGFFYFTFSNDSLKACQDSQKLAIKV-TPTKASAPEASSPMPTTPGPSSGGDIQSSP 145
PSR GFFYF+F++ SLKACQ SQKLAIKV T A+A +S MP P P S G++ SP
Sbjct: 2 PSRPGFFYFSFNDGSLKACQASQKLAIKVITSVAAAATPHASAMP--PAPFS-GEVSPSP 172
Query: 146 SFPWPF-HPHQGSSPGPAPTPEASSPITVPLVPYKGSGDGMPFINSNPAVPLPTGEVDSA 204
+PW + +P +SPGP+P S+ +T P+VPYK S MPFI+SNPAVPLPT EVDSA
Sbjct: 173 LYPWHYNNPLHAASPGPSP----SASVTAPMVPYKSS--SMPFISSNPAVPLPTDEVDSA 334
Query: 205 -TIHPLAT-SGHQGQVPI 220
+IHPL T SGH+ QV I
Sbjct: 335 SSIHPLPTSSGHELQVMI 388
>CD410836
Length = 450
Score = 108 bits (271), Expect = 2e-24
Identities = 58/79 (73%), Positives = 63/79 (79%), Gaps = 4/79 (5%)
Frame = -2
Query: 146 SFPWPFHPH-QGSSPGPAPTPEA--SSPITVPLVPYKGSGDGMPFINSNPAVPLPTGEVD 202
SFPWPFHP + SSPGPAP +A SSP+T+PLVP KG G MPF+NSNPAVPLPTGEVD
Sbjct: 449 SFPWPFHPGPEASSPGPAPQAQAQASSPVTIPLVPDKGGG--MPFMNSNPAVPLPTGEVD 276
Query: 203 SATIHPL-ATSGHQGQVPI 220
SATI PL TSGHQG V I
Sbjct: 275 SATIRPLPITSGHQGPVMI 219
>TC221987 nodulin
Length = 844
Score = 57.8 bits (138), Expect = 4e-09
Identities = 49/190 (25%), Positives = 72/190 (37%), Gaps = 15/190 (7%)
Frame = +1
Query: 6 FFYFLILSLFFKLSHSTTILVDGSSEWKNPT--------------VSIGDSITFKHKQNY 51
F + L + L +S + +V GS WK P IGD++ FK+ +
Sbjct: 46 FLFMLSMWLLISISEAAKYVVGGSETWKFPLSKPDSLSHWASSHRFKIGDTLIFKYDERT 225
Query: 52 NLYIFKNQKAFNLCNFT-QANLLTDPSTTSCSYTWHPSRVGFFYFTFSNDSLKACQDSQK 110
N+ + CN + ++L + T T + GF +F N S CQ K
Sbjct: 226 ESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLT----KSGFRHFISGNQS--HCQMGLK 387
Query: 111 LAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSP 170
L + V SP P++P PS P SP P+P+P SSP
Sbjct: 388 LMVVVMSNNTKKKLIHSPSPSSPSPS----------------PSPSPSPSPSPSPSLSSP 519
Query: 171 ITVPLVPYKG 180
PL +G
Sbjct: 520 SPSPLPNNQG 549
>TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall protein,
partial (48%)
Length = 1076
Score = 44.3 bits (103), Expect = 5e-05
Identities = 23/58 (39%), Positives = 29/58 (49%)
Frame = +3
Query: 117 PTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVP 174
P+ S+P SSP P++P PSS PS P P P S P +P P + P T P
Sbjct: 399 PSPLSSPPPSSPPPSSPPPSSPPPASPPPSSPPPASPPPSSPPPSSPPPFSPPPATPP 572
Score = 40.0 bits (92), Expect = 0.001
Identities = 24/54 (44%), Positives = 27/54 (49%)
Frame = +3
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVP 174
S+P SSP P +P PSS PS P P P SP PA P A+ P VP
Sbjct: 441 SSPPPSSPPPASPPPSSPPPASPPPSSPPPSSP-PPFSPPPATPPPATPPPAVP 599
Score = 37.7 bits (86), Expect = 0.004
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = +3
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLV 176
++P SSP P +P PSS PS P PF P + P P P P P V
Sbjct: 471 ASPPPSSPPPASPPPSS-----PPPSSPPPFSPPPATPPPATPPPAVPPPSLTPTV 623
Score = 35.0 bits (79), Expect = 0.029
Identities = 28/74 (37%), Positives = 36/74 (47%)
Frame = +3
Query: 125 ASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSGDG 184
++SP P TP +S +QSSP P P P SP PA TP SP++ P P
Sbjct: 279 STSPAPPTP-QASPPPVQSSPP-PVPSSPPPSQSPPPASTP-PPSPLSSP-PPSSPPPSS 446
Query: 185 MPFINSNPAVPLPT 198
P + PA P P+
Sbjct: 447 PPPSSPPPASPPPS 488
Score = 34.3 bits (77), Expect = 0.050
Identities = 32/111 (28%), Positives = 45/111 (39%), Gaps = 16/111 (14%)
Frame = +3
Query: 117 PTKASAPEA-SSPMP---------------TTPGPSSGGDIQSSPSFPWPFHPHQGSSPG 160
P ++S P SSP P ++P PSS PS P P P S P
Sbjct: 321 PVQSSPPPVPSSPPPSQSPPPASTPPPSPLSSPPPSSPPPSSPPPSSPPPASPPPSSPPP 500
Query: 161 PAPTPEASSPITVPLVPYKGSGDGMPFINSNPAVPLPTGEVDSATIHPLAT 211
+P P + P + P P+ P PAVP P+ + T+ PL++
Sbjct: 501 ASPPPSSPPPSSPP--PFSPPPATPPPATPPPAVPPPS---LTPTVTPLSS 638
>TC203324 similar to UP|Q9S728 (Q9S728) En/Spm-like transposon protein
(Protodermal factor 1), partial (28%)
Length = 728
Score = 43.9 bits (102), Expect = 6e-05
Identities = 37/109 (33%), Positives = 46/109 (41%), Gaps = 13/109 (11%)
Frame = +2
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSP---SFPWPFHPHQGSSP-------GPAPTPEASSP 170
S+P + P+TP SGG+ SSP P P P S+P G PTP SP
Sbjct: 251 SSPPSHHNSPSTPSTPSGGNCGSSPPQHHDPTPSTPSTPSNPPSGGYYGGSPPTPVTVSP 430
Query: 171 ITVPLVPYKGSGDGMPFINSNPAVPLP---TGEVDSATIHPLATSGHQG 216
+ P+ P G P I S P +P P TG + HP G G
Sbjct: 431 PSTPVDP------GTPSIPSPPLIPSPSPFTGTCNYWRNHPAIIWGILG 559
Score = 26.9 bits (58), Expect = 7.9
Identities = 41/142 (28%), Positives = 53/142 (36%), Gaps = 16/142 (11%)
Frame = +2
Query: 108 SQKLAIKV-TPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPE 166
SQ L I V + T A +P P P +G S PS H H S P +P
Sbjct: 119 SQSLVIPVISTTVADQKNYYTPDPHAGSPPTGSHNSSPPS-----HGHGSSPPSHHNSP- 280
Query: 167 ASSPITVPLVPYKGSG-----DGMPFINSNPAVPLPTGEVDSA-----TIHPLATSGHQG 216
S+P T P GS D P S P+ P G + T+ P +T G
Sbjct: 281 -STPST-PSGGNCGSSPPQHHDPTPSTPSTPSNPPSGGYYGGSPPTPVTVSPPSTPVDPG 454
Query: 217 -----QVPILFSHSCFTKVCTH 233
P++ S S FT C +
Sbjct: 455 TPSIPSPPLIPSPSPFTGTCNY 520
>TC203730 similar to UP|Q9S728 (Q9S728) En/Spm-like transposon protein
(Protodermal factor 1), partial (47%)
Length = 1088
Score = 43.9 bits (102), Expect = 6e-05
Identities = 37/109 (33%), Positives = 46/109 (41%), Gaps = 13/109 (11%)
Frame = +1
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSP---SFPWPFHPHQGSSP-------GPAPTPEASSP 170
S+P + P+TP SGG+ SSP P P P S+P G PTP SP
Sbjct: 238 SSPPSHHNSPSTPSTPSGGNCGSSPPQHHDPTPSTPSTPSNPPSGGYYGGSPPTPVTVSP 417
Query: 171 ITVPLVPYKGSGDGMPFINSNPAVPLP---TGEVDSATIHPLATSGHQG 216
+ P+ P G P I S P +P P TG + HP G G
Sbjct: 418 PSTPVDP------GTPSIPSPPLIPSPSPFTGTCNYWRNHPAIIWGILG 546
>BI315914 similar to PIR|T09854|T098 proline-rich cell wall protein - upland
cotton, partial (37%)
Length = 246
Score = 43.9 bits (102), Expect = 6e-05
Identities = 22/58 (37%), Positives = 28/58 (47%)
Frame = +1
Query: 117 PTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVP 174
P+ S+P SSP P++P PSS PS P P P S P P P + P + P
Sbjct: 34 PSPLSSPPPSSPPPSSPPPSSPPPASPPPSSPPPASPPPSSPPPSTPPPSSPPPFSPP 207
Score = 40.4 bits (93), Expect = 7e-04
Identities = 22/54 (40%), Positives = 25/54 (45%)
Frame = +1
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVP 174
S+P SSP P +P PSS PS P P P S P +P P P T P
Sbjct: 76 SSPPPSSPPPASPPPSSPPPASPPPSSPPPSTPPPSSPPPFSPPPATPPPATPP 237
Score = 38.1 bits (87), Expect = 0.003
Identities = 19/54 (35%), Positives = 27/54 (49%)
Frame = +1
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVP 174
S+P SSP P++P P+S P+ P P P + P +P P + P T P
Sbjct: 61 SSPPPSSPPPSSPPPASPPPSSPPPASPPPSSPPPSTPPPSSPPPFSPPPATPP 222
Score = 36.6 bits (83), Expect = 0.010
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 121 SAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTP 165
++P SSP P +P PSS PS P PF P + P P P
Sbjct: 106 ASPPPSSPPPASPPPSSPPPSTPPPSSPPPFSPPPATPPPATPPP 240
>TC209672 similar to GB|AAM19966.1|20466089|AY098956 At2g32600/T26B15.16
{Arabidopsis thaliana;} , partial (25%)
Length = 682
Score = 43.1 bits (100), Expect = 1e-04
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Frame = +3
Query: 119 KASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEA-------SSPI 171
K+ PEA+ P P T ++G P P P P QG P P P P+ ++P
Sbjct: 132 KSKPPEANKPQPAT--TANGTAPSGVPPRPLP-PPPQGPLPPPPPPPQGLPPGAPMANPP 302
Query: 172 TVPLVPYKGSGDGMPFINSNPAVPLPTGEVDSATIHPLATSGHQG 216
P P GS P +N P P+G + S P SG G
Sbjct: 303 RAPPPPMPGSMPPPPMAATNGPRPAPSGGMPSIPPPPPVASGTSG 437
>TC206122 weakly similar to PIR|C86473|C86473 arabinogalactan-protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(40%)
Length = 797
Score = 42.7 bits (99), Expect = 1e-04
Identities = 27/55 (49%), Positives = 28/55 (50%)
Frame = +3
Query: 116 TPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSP 170
TPT AP SSP PTT + G SSP P P P G S GPAP AS P
Sbjct: 243 TPTPTPAP--SSPTPTTAPSQAPGPTTSSPPAPGPSGPAPGPS-GPAPDQPASEP 398
Score = 29.6 bits (65), Expect = 1.2
Identities = 24/85 (28%), Positives = 35/85 (40%), Gaps = 4/85 (4%)
Frame = +3
Query: 119 KASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPL--- 175
+A P + P TTP PS+ S+P+ P P ++P PA P ++P P
Sbjct: 123 QAPGPAPTQPPSTTPSPST-----SAPA-PSP----TANTPPPAAAPAPATPTPTPAPSS 272
Query: 176 -VPYKGSGDGMPFINSNPAVPLPTG 199
P S+P P P+G
Sbjct: 273 PTPTTAPSQAPGPTTSSPPAPGPSG 347
>TC208362 weakly similar to UP|O64835 (O64835) Expressed protein
(At2g23670/F26B6.32), partial (72%)
Length = 805
Score = 42.4 bits (98), Expect = 2e-04
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = -2
Query: 116 TPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPI--TV 173
TP + P++ SP+P +P P +PS P P S P P P P+ P+ +
Sbjct: 411 TPQNSPPPQSPSPLPLSPSPP-----PPTPSPPSP----APSPPPPIPYPQPQIPLSQSP 259
Query: 174 PLVPYKGSGDGMPFINSNPA--VPLPTGEVDSATIHPLAT-SGHQGQVPI-LFSHSCFTK 229
PL P S + PA PLP+ S+ AT S + +VP+ + H+ T+
Sbjct: 258 PLPPPPSSDSAVSRTRECPAPRTPLPSPSTPSSPSEKTATASAPRSEVPLRV*RHAACTE 79
Query: 230 VCTH 233
+H
Sbjct: 78 TASH 67
>TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein precursor,
partial (44%)
Length = 996
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +1
Query: 116 TPTKASAPEA---SSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPIT 172
+P AS P SSP P +P PSS P+ P P P S P +P P + P T
Sbjct: 280 SPPPASTPPPAPLSSPPPASPPPSSPPPASPPPASPPPASPPPASPPPASPPPASPPPAT 459
Query: 173 VPLVPYKGSGDGMPFINSNPAVPLPTGEVDSATIHPLAT 211
P P + PA P P + T PL++
Sbjct: 460 PPPA-------SPPPFSPPPATPPPATPPPALTPTPLSS 555
Score = 35.4 bits (80), Expect = 0.022
Identities = 29/73 (39%), Positives = 35/73 (47%)
Frame = +1
Query: 125 ASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSGDG 184
++SP P TP SS IQSSP P P P SP PA TP +P++ P P
Sbjct: 187 STSPAPPTP-QSSPPPIQSSPP-PVPSSPPPAQSPPPASTP-PPAPLSSP-PPASPPPSS 354
Query: 185 MPFINSNPAVPLP 197
P + PA P P
Sbjct: 355 PPPASPPPASPPP 393
>TC226353 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (26%)
Length = 1341
Score = 40.8 bits (94), Expect = 5e-04
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +3
Query: 34 NPTVSIGDSITFKHKQNYNLYIFKNQKAFNLCNFTQA--NLLTDPSTTSCSYTWHPSRVG 91
N T ++ D++ F + + AF+ CN A L + P+T + + T G
Sbjct: 222 NKTFTVNDTLVFNFATGQHNVAKVTKSAFDACNGGSAVFTLTSGPATVTLNET------G 383
Query: 92 FFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPF 151
Y+ S S C QKLAI V ++ P SP P G SG ++SP P
Sbjct: 384 EQYYICSVGS--HCSAGQKLAINVNRASSTGP---SPAPQPRG--SGSPPRASPV---PT 533
Query: 152 HPHQGSSPGPAP 163
Q SSP P P
Sbjct: 534 QAPQASSPTPPP 569
Score = 37.0 bits (84), Expect = 0.008
Identities = 29/108 (26%), Positives = 46/108 (41%), Gaps = 1/108 (0%)
Frame = +3
Query: 39 IGDSITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFTFS 98
+GD + F + N + + F+ C+ A+ + +T T + S FF
Sbjct: 702 VGDVLVFNYASNTHNVEEVTKANFDACS--SASPIATFTTPPARVTLNKSGQHFFICGIP 875
Query: 99 NDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTP-GPSSGGDIQSSP 145
C QKLAI VT + + P +++ PTTP PS G + P
Sbjct: 876 GH----CLGGQKLAINVTGSSTATPPSAAAPPTTPSSPSPAGAVTPPP 1007
>TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich protein, partial
(20%)
Length = 1041
Score = 40.8 bits (94), Expect = 5e-04
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -2
Query: 114 KVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITV 173
K+ PT A P + +P TP P+ + +P+ P P P ++P PAP E +P
Sbjct: 638 KIAPTPAKTPPSPAPAKATPAPAP-APTKPAPT-PSPVPPPPAATPAPAPVIEVPAPAPA 465
Query: 174 PLV 176
P++
Sbjct: 464 PVI 456
Score = 35.4 bits (80), Expect = 0.022
Identities = 22/89 (24%), Positives = 33/89 (36%)
Frame = -2
Query: 114 KVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITV 173
K P + P+ P P +P P + S P P P + P+P P ++P
Sbjct: 749 KAPPPQIPIPQPPKPSPVSPPPLPPPPVASPPPLPPPKIAPTPAKTPPSPAPAKATPAPA 570
Query: 174 PLVPYKGSGDGMPFINSNPAVPLPTGEVD 202
P P K + P A P P ++
Sbjct: 569 P-APTKPAPTPSPVPPPPAATPAPAPVIE 486
Score = 35.0 bits (79), Expect = 0.029
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = -2
Query: 108 SQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPG------P 161
S LA+ PT ++P +S PTT P + + +P P SSP P
Sbjct: 905 STPLAVTQPPTVVASPPTTSTPPTTSQPPANVAPKPAPVKPSAPKVAPASSPKAPPPQIP 726
Query: 162 APTPEASSPITVPLVPYKGSGDGMPFINSNPAVPLP 197
P P SP++ P +P P + S P +P P
Sbjct: 725 IPQPPKPSPVSPPPLP-------PPPVASPPPLPPP 639
>TC219909 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-like protein
2 precursor (Phytocyanin-like protein), partial (21%)
Length = 943
Score = 40.4 bits (93), Expect = 7e-04
Identities = 40/167 (23%), Positives = 65/167 (37%), Gaps = 1/167 (0%)
Frame = +1
Query: 43 ITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFTFSNDSL 102
+ FK+ + + + ++ ++ CN T + T + R G FYF D
Sbjct: 1 LVFKYNKGSDSVLEVKKEDYDKCNKTNPIKKFENGDTEFKF----DRSGPFYFISGKDG- 165
Query: 103 KACQDSQKLAIKVTPTKASAPEASSPMP-TTPGPSSGGDIQSSPSFPWPFHPHQGSSPGP 161
C+ QKL + V + + P P T+P PS +++P P P S
Sbjct: 166 -NCEKGQKLIVVVLTPRTPPTPKTPPFPKTSPSPSPSQSPKANPPTVSPPLPSPSPSVHS 342
Query: 162 APTPEASSPITVPLVPYKGSGDGMPFINSNPAVPLPTGEVDSATIHP 208
ASSP+ G P I +PA+ +PT ++ T P
Sbjct: 343 KSLSPASSPVPAV---------GTPAI--SPAISIPTLAPETGTPPP 450
Score = 32.0 bits (71), Expect = 0.25
Identities = 22/49 (44%), Positives = 26/49 (52%)
Frame = +1
Query: 122 APEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSP 170
APE +P P+ GPSS SSP P P SS P+P P +SSP
Sbjct: 424 APETGTPPPSL-GPSS-----SSPPSPGP-----SSSSPPSPGPSSSSP 537
Score = 31.6 bits (70), Expect = 0.32
Identities = 19/55 (34%), Positives = 26/55 (46%)
Frame = +1
Query: 116 TPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSP 170
TP + P +SSP +PGPSS PS P S P AP+ +++P
Sbjct: 439 TPPPSLGPSSSSP--PSPGPSSSSPPSPGPSSSSPPPAGPTSPPSLAPSSNSTAP 597
>TC218114 similar to UP|BCP_PEA (Q41001) Blue copper protein precursor,
partial (57%)
Length = 901
Score = 40.0 bits (92), Expect = 0.001
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Frame = +3
Query: 37 VSIGDSITFKHKQNYNLYIFKNQKAFNLCNFTQANLLTDPSTTSCSYTWHPSRVGFFYFT 96
+ +GDS+ F + + + K + + C T +L TD S T+ T G YF
Sbjct: 195 LKVGDSLVFNYGAGHTVDEVK-ESDYKSCT-TGNSLSTDSSGTT---TITLKTAGTHYFI 359
Query: 97 FSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTT-PGPSSGGDIQSSPSFPWPFHPHQ 155
++ C KLA+KV KASAP A++P P PS D + +P+ +
Sbjct: 360 CASPG--HCDGGMKLAVKVKAKKASAP-ATAPSPAAKDSPSDSDDTKDTPT---STSTNP 521
Query: 156 GSSPGPAPTPEASSPIT 172
+S P+ E S+ T
Sbjct: 522 KTSTSTTPSTETSTTTT 572
>AW620463
Length = 398
Score = 40.0 bits (92), Expect = 0.001
Identities = 25/68 (36%), Positives = 28/68 (40%), Gaps = 1/68 (1%)
Frame = +3
Query: 108 SQKLAIKVTPTKASAPEASSPMPTTPG-PSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPE 166
S K + P P P P P P+S SSPS P P P S P P P P
Sbjct: 195 SSKSSTTAPPPPPQPPPPLPPPPPPPSSPAS*PSSPSSPSTPSPSSPPMTSPPTPPPGPA 374
Query: 167 ASSPITVP 174
SSP +P
Sbjct: 375 PSSPSPIP 398
Score = 33.1 bits (74), Expect = 0.11
Identities = 26/76 (34%), Positives = 34/76 (44%)
Frame = +3
Query: 123 PEASSPMPTTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPYKGSG 182
P AS P++ G ++ +SS + P P P Q P P P P SSP + P P S
Sbjct: 144 P*ASPNPPSSHGSATPASSKSSTTAPPP--PPQPPPPLPPPPPPPSSPAS*PSSP---SS 308
Query: 183 DGMPFINSNPAVPLPT 198
P +S P PT
Sbjct: 309 PSTPSPSSPPMTSPPT 356
>BI317298 similar to GP|5139695|dbj| expressed in cucumber hypocotyls
{Cucumis sativus}, partial (34%)
Length = 381
Score = 39.7 bits (91), Expect = 0.001
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 121 SAPEASSPMP--TTPGPSSGGDIQSSPSFPWPFHPHQGSSPGPAPTPEASSPITVPLVPY 178
S+P ASSP P TP S ++P+ P P +SP PA P A P++ P P
Sbjct: 7 SSPPASSPKPATATPASSPAASPTTTPAAPAPATKPPAASPPPANPPPAPVPVSSPPAPV 186
Query: 179 KGSGDGMP 186
S P
Sbjct: 187 PVSSPPAP 210
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,165,781
Number of Sequences: 63676
Number of extensions: 264580
Number of successful extensions: 4559
Number of sequences better than 10.0: 592
Number of HSP's better than 10.0 without gapping: 3511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4126
length of query: 233
length of database: 12,639,632
effective HSP length: 94
effective length of query: 139
effective length of database: 6,654,088
effective search space: 924918232
effective search space used: 924918232
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Medicago: description of AC126014.9