
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126009.11 - phase: 0
(176 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226353 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial ... 98 2e-21
TC207894 similar to UP|O81500 (O81500) F9D12.16 protein (At5g263... 95 1e-20
TC209188 similar to UP|BCP_PEA (Q41001) Blue copper protein prec... 94 3e-20
TC207895 similar to UP|O81500 (O81500) F9D12.16 protein (At5g263... 94 4e-20
CD409344 91 4e-19
TC231411 similar to GB|AAP21370.1|30102904|BT006562 At3g27200 {A... 88 2e-18
TC204673 similar to UP|Q9ZRV5 (Q9ZRV5) Basic blue copper protein... 88 2e-18
TC204674 similar to UP|Q9ZRV5 (Q9ZRV5) Basic blue copper protein... 84 3e-17
TC218114 similar to UP|BCP_PEA (Q41001) Blue copper protein prec... 84 3e-17
TC221987 nodulin 82 1e-16
TC214067 weakly similar to UP|Q949E8 (Q949E8) Uclacyanin 3-like ... 80 4e-16
TC214395 weakly similar to UP|Q949E8 (Q949E8) Uclacyanin 3-like ... 77 3e-15
TC218257 77 5e-15
CD404820 weakly similar to SP|Q41001|BCP_P Blue copper protein p... 75 2e-14
TC204675 homologue to UP|Q8GV76 (Q8GV76) Auxin efflux carrier pr... 75 2e-14
TC219353 weakly similar to UP|Q8L555 (Q8L555) Uclacyanin 3-like ... 75 2e-14
TC226352 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial ... 74 3e-14
TC231303 homologue to UP|N552_SOYBN (Q02917) Early nodulin 55-2 ... 73 6e-14
TC227855 weakly similar to GB|AAP88350.1|32815931|BT009716 At3g2... 73 8e-14
TC204881 weakly similar to UP|ENL1_ARATH (Q9SK27) Early nodulin-... 72 1e-13
>TC226353 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (26%)
Length = 1341
Score = 97.8 bits (242), Expect = 2e-21
Identities = 61/172 (35%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTT----LFDYQTWTANKVFRLGDTLT 56
MA + L LFA +A++ A +VGD GW Y W +NK F + DTL
Sbjct: 78 MARNLLLVLFA-VATLLHGSAAQTRHMVGDATGWIIPAGGAATYTAWASNKTFTVNDTLV 254
Query: 57 FNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQK 116
FN+ G+ NV +V S F +C+ LTSG + + G ++YI SV HC GQK
Sbjct: 255 FNFATGQHNVAKVTKSAFDACNGGSAVFTLTSGPATVTLNETGEQYYICSVGSHCSAGQK 434
Query: 117 LFITV------------QPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPA 156
L I V QP+ G P SP P+ + +P PP +AP PA
Sbjct: 435 LAINVNRASSTGPSPAPQPRGSGSPPRASPVPTQAPQASSPTPPPRSAPAPA 590
Score = 75.9 bits (185), Expect = 9e-15
Identities = 47/148 (31%), Positives = 66/148 (43%), Gaps = 9/148 (6%)
Frame = +3
Query: 14 ASIFSTMAVAKDFVVGDEKGWTTLFD---YQTWTANKVFRLGDTLTFNYVGGKDNVVRVN 70
A F + F+VG+ GW + Y W + K FR+GD L FNY NV V
Sbjct: 582 APAFGPSSEPATFIVGETAGWIVPGNASFYTAWASGKNFRVGDVLVFNYASNTHNVEEVT 761
Query: 71 GSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFI------TVQPK 124
++F +CS T+ ++ + G+ ++I + HC GQKL I T P
Sbjct: 762 KANFDACSSASPIATFTTPPARVTLNKSGQHFFICGIPGHCLGGQKLAINVTGSSTATPP 941
Query: 125 QDGWSPVPSPSPSPSLDLVTPEAPPSNA 152
P SPSP+ VTP PP N+
Sbjct: 942 SAAAPPTTPSSPSPA-GAVTP--PPQNS 1016
>TC207894 similar to UP|O81500 (O81500) F9D12.16 protein (At5g26330), partial
(56%)
Length = 755
Score = 95.1 bits (235), Expect = 1e-20
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Frame = +2
Query: 3 LSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTL--FDYQTWTANKVFRLGDTLTFNYV 60
+ R + LF ++ + ++ A + VGD GWTTL DY+ W A K F++GDT+ F Y
Sbjct: 56 VERVVVLFIVMTIV--KVSYAAVYKVGDSAGWTTLGTIDYRKWAATKNFQIGDTIIFEYN 229
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
NV+RV + +K+C+ T+G+D I IT +G ++ V HC+ GQK+ I
Sbjct: 230 AKFHNVMRVTHAMYKTCNASSPIATFTTGKDSINITNHGHHFFFCGVPGHCQAGQKVDIN 409
Query: 121 VQPKQDGWSPVPSPS--PSPSLDLVTPEAP-PSNA 152
V K +P PS S SP++ T AP PSNA
Sbjct: 410 VL-KVSAEAPTPSGSALASPTVQASTVPAPSPSNA 511
>TC209188 similar to UP|BCP_PEA (Q41001) Blue copper protein precursor,
partial (57%)
Length = 597
Score = 94.0 bits (232), Expect = 3e-20
Identities = 49/122 (40%), Positives = 69/122 (56%)
Frame = +1
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 60
MA S AL L++L+A + +A + VGD GW DY TWT +K+F +GD+L FNY
Sbjct: 58 MAFSSALILWSLLAINMALPTLATVYTVGDTSGWAIGTDYSTWTGDKIFSVGDSLAFNY- 234
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
G V V SD+KSC+ + +SG I + + G ++I SV HC G KL +T
Sbjct: 235 GAGHTVDEVKESDYKSCTAGNSISTDSSGATTIALKSAGTHYFICSVPGHCSGGMKLAVT 414
Query: 121 VQ 122
V+
Sbjct: 415 VK 420
>TC207895 similar to UP|O81500 (O81500) F9D12.16 protein (At5g26330), partial
(53%)
Length = 858
Score = 93.6 bits (231), Expect = 4e-20
Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Frame = +3
Query: 3 LSRALFLFALIASIF--STMAVAKDFVVGDEKGWTTL--FDYQTWTANKVFRLGDTLTFN 58
+ +A+F ++ + F S AV K VGD GWT + DY+ W A K F++GDT+ F
Sbjct: 138 IEKAVFFLMMMMTAFQVSHAAVHK---VGDSAGWTIIGNIDYKKWAATKNFQVGDTIIFE 308
Query: 59 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 118
Y NV+RV + +KSC+ +++G D I IT YG +++ + HC+ GQK+
Sbjct: 309 YNAKFHNVMRVTHAMYKSCNASSPLTTMSTGNDTIKITNYGHHFFLCGIPGHCQAGQKVD 488
Query: 119 ITVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPA 156
I V + +PSP+ + +P PP+N P P+
Sbjct: 489 INVVKVS------AAAAPSPTSAMASP-VPPANVPAPS 581
>CD409344
Length = 438
Score = 90.5 bits (223), Expect = 4e-19
Identities = 50/134 (37%), Positives = 70/134 (51%), Gaps = 2/134 (1%)
Frame = -2
Query: 3 LSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTL--FDYQTWTANKVFRLGDTLTFNYV 60
+ +A+ + A S AV K VGD GWT + DY+ W A K F++GDT+ F Y
Sbjct: 419 IEKAVVFLMMTAFQVSNSAVHK---VGDSAGWTIIGNIDYKKWAATKNFQVGDTIIFEYN 249
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
NV+RV +KSC+ +++G D I IT YG ++ V HC+ GQK+ I
Sbjct: 248 AKFHNVMRVTHGMYKSCNASSPLTRMSTGNDTIKITNYGHHLFLCGVPGHCQAGQKVDIN 69
Query: 121 VQPKQDGWSPVPSP 134
V K +P PSP
Sbjct: 68 VVKKVSAEAPTPSP 27
>TC231411 similar to GB|AAP21370.1|30102904|BT006562 At3g27200 {Arabidopsis
thaliana;} , partial (57%)
Length = 855
Score = 88.2 bits (217), Expect = 2e-18
Identities = 54/163 (33%), Positives = 82/163 (50%)
Frame = +2
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 60
M +FL ALIA++ + A A VVG +GW D+++WT+ + F++GD L F Y
Sbjct: 59 MGHKNTIFL-ALIATLIAKEAFAAQHVVGGSQGWDQSTDFKSWTSGQTFKVGDKLVFKYS 235
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
V N S +K+C + L++G D + + G R++ HC G K+ IT
Sbjct: 236 SFHSVVELGNESAYKNCDISSPVQSLSTGNDVVKLDKPGTRYFTCGTLGHCSQGMKVKIT 415
Query: 121 VQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPRRS 163
++ K + SP SP+ SPSL +P P + SS P S
Sbjct: 416 IR-KGNAPSPALSPATSPSL---SPSLSPLLSSTSLSSPPSSS 532
>TC204673 similar to UP|Q9ZRV5 (Q9ZRV5) Basic blue copper protein, partial
(98%)
Length = 582
Score = 87.8 bits (216), Expect = 2e-18
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = +3
Query: 1 MALSR--ALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFN 58
MAL R A+ L + S MA A + VGD GWT F+ W K+FR GDTL FN
Sbjct: 45 MALGRGSAVVLLLCFLLLHSQMARAATYTVGDSGGWT--FNTVAWPKGKLFRAGDTLAFN 218
Query: 59 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 118
Y G NVV VN + + SC P A V SG D+I + G+ ++I + HCE+G K+
Sbjct: 219 YSPGTHNVVAVNKAGYDSCKTPRGAKVYKSGTDQIRLAK-GQNYFICNYVGHCESGMKIA 395
Query: 119 I 119
I
Sbjct: 396 I 398
>TC204674 similar to UP|Q9ZRV5 (Q9ZRV5) Basic blue copper protein, partial
(98%)
Length = 635
Score = 84.3 bits (207), Expect = 3e-17
Identities = 50/121 (41%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Frame = +2
Query: 1 MALSR--ALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFN 58
MAL R A+ L + S MA A + VGD +GWT F+ TW K F GDTL FN
Sbjct: 53 MALGRGSAVVLLLCFLVLQSEMARAATYRVGDSRGWT--FNTVTWPQGKRFTAGDTLAFN 226
Query: 59 YVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLF 118
Y G NVV V+ + + SC P A V SG+D+I + G+ ++I + HCE+G K+
Sbjct: 227 YSPGAHNVVAVSKAGYDSCKTPRGAKVYRSGKDQIRLAR-GQNYFICNYVGHCESGMKIA 403
Query: 119 I 119
I
Sbjct: 404 I 406
>TC218114 similar to UP|BCP_PEA (Q41001) Blue copper protein precursor,
partial (57%)
Length = 901
Score = 84.3 bits (207), Expect = 3e-17
Identities = 56/162 (34%), Positives = 78/162 (47%), Gaps = 4/162 (2%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 60
MA S AL L +A A VGD GW DY TW + ++GD+L FNY
Sbjct: 51 MASSVALVLGLCLALNMVLPTRAATHTVGDTSGWALGADYSTWASGLKLKVGDSLVFNY- 227
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFIT 120
G V V SD+KSC+ + +SG I + T G ++I + HC+ G KL +
Sbjct: 228 GAGHTVDEVKESDYKSCTTGNSLSTDSSGTTTITLKTAGTHYFICASPGHCDGGMKLAVK 407
Query: 121 VQPKQDGWSPVPSPSP----SPSLDLVTPEAPPSNAPWPASS 158
V+ K+ +P +PSP SPS T + P S + P +S
Sbjct: 408 VKAKKAS-APATAPSPAAKDSPSDSDDTKDTPTSTSTNPKTS 530
>TC221987 nodulin
Length = 844
Score = 82.0 bits (201), Expect = 1e-16
Identities = 52/164 (31%), Positives = 78/164 (46%), Gaps = 5/164 (3%)
Frame = +1
Query: 8 FLFALIASIFSTMAVAKDFVVGDEKGWTTLFD----YQTWTANKVFRLGDTLTFNYVGGK 63
FLF L + +++ A +VVG + W W ++ F++GDTL F Y
Sbjct: 46 FLFMLSMWLLISISEAAKYVVGGSETWKFPLSKPDSLSHWASSHRFKIGDTLIFKYDERT 225
Query: 64 DNVVRVNGSDFKSCSVPLTAPVL-TSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQ 122
++V VN +D++ C+ VL G K+++T G R +IS HC+ G KL + V
Sbjct: 226 ESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKLMVVVM 405
Query: 123 PKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPRRSLLP 166
+ SPSPS +P PS +P P+ S P S LP
Sbjct: 406 SNNTKKKLIHSPSPSSPSPSPSPSPSPSPSPSPSLSSPSPSPLP 537
>TC214067 weakly similar to UP|Q949E8 (Q949E8) Uclacyanin 3-like protein,
partial (50%)
Length = 948
Score = 80.5 bits (197), Expect = 4e-16
Identities = 52/158 (32%), Positives = 74/158 (45%)
Frame = +1
Query: 6 ALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDN 65
A FL L+A F T+ A D VGD GW +Y TW + K F +GDTL F Y
Sbjct: 106 ASFLVLLLA--FPTVFGA-DHEVGDTSGWALGVNYNTWASGKTFTVGDTLVFKY-DSTHQ 273
Query: 66 VVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQ 125
V V+ S + SCS + G KI +T+ G+R+++ ++ HC G KL I V
Sbjct: 274 VDEVDESGYNSCSSSNSIKNYQDGNSKIELTSPGKRYFLCPISGHCAGGMKLQINVAAAS 453
Query: 126 DGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVPRRS 163
PS +P + +P P + +S P+ S
Sbjct: 454 GTPPTTPSGTPPTTPSNPSPSPPSESGSTNTTSPPKPS 567
>TC214395 weakly similar to UP|Q949E8 (Q949E8) Uclacyanin 3-like protein,
partial (44%)
Length = 652
Score = 77.4 bits (189), Expect = 3e-15
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Frame = +2
Query: 25 DFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAP 84
D VGD GW +Y TW + K FR+GD L F Y V V+ S + SCS
Sbjct: 11 DHEVGDTGGWALGVNYNTWASGKTFRIGDNLVFKY-DSTHQVDEVDESGYNSCSSSNIIK 187
Query: 85 VLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITV----QPKQDGWSPVPSPS-PSPS 139
G KI +T+ G+R+++ ++ HC G KL I V P +P +PS PSPS
Sbjct: 188 NYKDGNTKIELTSTGKRYFLCPISGHCAGGMKLQINVVAGTPPTTPSGTPPTTPSNPSPS 367
Query: 140 LDLVTPEAPPSNAPWPASSV 159
+ ++ P P+ +V
Sbjct: 368 PPSDSGSTNTTSPPKPSGAV 427
>TC218257
Length = 971
Score = 76.6 bits (187), Expect = 5e-15
Identities = 46/150 (30%), Positives = 75/150 (49%), Gaps = 3/150 (2%)
Frame = +3
Query: 7 LFLFALIASIFSTMAVAKDF--VVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKD 64
+F+ AL+A V VVG ++GW D +W+A++VFR+GD + Y +
Sbjct: 231 VFIVALVAICLGGKWVEAQVHHVVGADRGWDQTSDLVSWSASRVFRVGDQIWLTYSVAQG 410
Query: 65 NVVRVNG-SDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQP 123
V + ++++C+V V T G I + + G R+++SS ++C+NG KL + V P
Sbjct: 411 LVAELKSREEYEACNVSNPINVYTEGLHTIPLESEGMRYFVSSEPENCKNGLKLHVEVLP 590
Query: 124 KQDGWSPVPSPSPSPSLDLVTPEAPPSNAP 153
K D + PS S D PS +P
Sbjct: 591 KAD--ERITEPSTSTLTDEAVAPTTPSGSP 674
>CD404820 weakly similar to SP|Q41001|BCP_P Blue copper protein precursor.
[Garden pea] {Pisum sativum}, partial (22%)
Length = 632
Score = 75.1 bits (183), Expect = 2e-14
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = -3
Query: 26 FVVGDEKGWTTLFD---YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSC-SVPL 81
+VVGD GW D Y W ++K F +GDTL+F + G NV+ V+ + SC S
Sbjct: 615 YVVGDGTGWRVPQDASTYHNWASDKNFTVGDTLSFIFQTGLHNVIEVSEESYNSCSSANP 436
Query: 82 TAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLD 141
+G + + G +YI S +HC NGQ+L I+V + P + +P P
Sbjct: 435 IGTTYNTGPANVTLNRGGEHYYICSFGNHCNNGQRLAISVSGSSTAFPPATTTAPPP--- 265
Query: 142 LVTPEAPPSNAP 153
P S+AP
Sbjct: 264 ------PSSSAP 247
>TC204675 homologue to UP|Q8GV76 (Q8GV76) Auxin efflux carrier protein, partial
(40%)
Length = 2164
Score = 75.1 bits (183), Expect = 2e-14
Identities = 40/92 (43%), Positives = 52/92 (56%)
Frame = +3
Query: 28 VGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLT 87
VGD GWT F+ W K+FR GDTL FNY G NVV VN + + SC P A V
Sbjct: 1737 VGDSGGWT--FNTVAWPKGKLFRAGDTLAFNYSPGTHNVVAVNKAGYDSCKTPRGAKVYK 1910
Query: 88 SGQDKIIITTYGRRWYISSVTDHCENGQKLFI 119
SG D+I + G+ ++I + CE+G K+ I
Sbjct: 1911 SGTDQIRLAK-GQNYFICNYVGPCESGMKIAI 2003
>TC219353 weakly similar to UP|Q8L555 (Q8L555) Uclacyanin 3-like protein-like
protein, partial (44%)
Length = 713
Score = 74.7 bits (182), Expect = 2e-14
Identities = 44/156 (28%), Positives = 72/156 (45%), Gaps = 1/156 (0%)
Frame = +2
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDEKGWTTLFDYQTWTANKVFRLGDTLTFNYV 60
M + +F + +A + + V G GW T + Q+W ++++F +GD+L F Y
Sbjct: 53 MGVPELMFRVSFMAVLIKLASATNYIVGGPSGGWDTNSNLQSWASSQIFSVGDSLVFQYP 232
Query: 61 GGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFI- 119
D VV V +D+ SC G I +T G+R++I HC G K+ I
Sbjct: 233 PNHD-VVEVTKADYDSCQPTNPIQSYNDGATTIPLTLPGKRYFICGTIGHCSQGMKVEID 409
Query: 120 TVQPKQDGWSPVPSPSPSPSLDLVTPEAPPSNAPWP 155
T+ + +P SP S + +PE S++P P
Sbjct: 410 TLASATNSVTPAASPEDSTTSPAESPEVIISSSPSP 517
>TC226352 weakly similar to UP|Q9M510 (Q9M510) Dicyanin, partial (27%)
Length = 795
Score = 74.3 bits (181), Expect = 3e-14
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Frame = +1
Query: 26 FVVGDEKGWTTLFD---YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSVPLT 82
+ VG+ GW + Y W + K F++GD L FNY NV V +++ SCS
Sbjct: 163 YTVGETAGWIVPGNASFYPAWASAKNFKVGDILVFNYPSNAHNVEEVTKANYDSCSSASP 342
Query: 83 APVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITVQPKQDGWSPVPSPSPSPSLDL 142
T+ ++ ++ G +YI + HC GQKL I V +P SPSPS
Sbjct: 343 IATFTTPPARVPLSKSGEHYYICGIPGHCLGGQKLSINVTGGSTATAPTTPSSPSPS-GA 519
Query: 143 VTPEAPPSNA 152
V+P PP N+
Sbjct: 520 VSP--PPQNS 543
Score = 35.0 bits (79), Expect = 0.018
Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Frame = +1
Query: 110 HCENGQKLFITVQPKQDGWSPVPSPSP---SPSLDLVTPEAPPSNAPWPASS 158
HC GQKL I V S PSP+P +P+ +P +PP + P P S
Sbjct: 1 HCSGGQKLAINVNRAS---SSTPSPAPEAQAPAPKATSPISPPRSTPAPGPS 147
>TC231303 homologue to UP|N552_SOYBN (Q02917) Early nodulin 55-2 precursor
(N-55-2) (Nodulin-315), complete
Length = 839
Score = 73.2 bits (178), Expect = 6e-14
Identities = 51/152 (33%), Positives = 76/152 (49%), Gaps = 10/152 (6%)
Frame = +2
Query: 8 FLFALIASIFSTMAVAKDFVVG-DEKGWTTLFD----YQTWTANKVFRLGDTLTFNYVGG 62
FL L + + + A+ +VVG EK W W + F++GDTL F Y
Sbjct: 86 FLVMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKR 265
Query: 63 KDNVVRVNGSDFKSCS-VPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFITV 121
++V VN +D++ C+ V V G K+++T G R +IS HC+ G KL + V
Sbjct: 266 TESVHEVNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLV 445
Query: 122 ----QPKQDGWSPVPSPSPSPSLDLVTPEAPP 149
+ K++ SP PSPSP PS L++P P
Sbjct: 446 ISSNKTKKNLLSPSPSPSPPPS-SLLSPSPSP 538
>TC227855 weakly similar to GB|AAP88350.1|32815931|BT009716 At3g20570
{Arabidopsis thaliana;} , partial (44%)
Length = 988
Score = 72.8 bits (177), Expect = 8e-14
Identities = 43/155 (27%), Positives = 67/155 (42%), Gaps = 19/155 (12%)
Frame = +1
Query: 25 DFVVGDEKGWTTLFD-----YQTWTANKVFRLGDTLTFNYVGGKDNVVRVNGSDFKSCSV 79
DFVVG +KGW+ D + W F++GD+L FNY G+D+V+ V D+ SC++
Sbjct: 154 DFVVGGQKGWSVPNDPSFNPFNQWAEKSRFQIGDSLVFNYQSGQDSVLYVKSEDYASCNI 333
Query: 80 PLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQKLFI--------------TVQPKQ 125
+ G + G ++IS D+C +KL + T P
Sbjct: 334 DSPYAKYSDGHTVYKLNQSGPHFFISGNKDNCNKNEKLTVIVLADRNKNTNQTTTASPPS 513
Query: 126 DGWSPVPSPSPSPSLDLVTPEAPPSNAPWPASSVP 160
S PS +P+ +P + + P P S P
Sbjct: 514 PQTSSSPSAAPTGQDQGQSPTSDTNQTPSPVSEPP 618
>TC204881 weakly similar to UP|ENL1_ARATH (Q9SK27) Early nodulin-like protein
1 precursor (Phytocyanin-like protein), partial (65%)
Length = 968
Score = 72.4 bits (176), Expect = 1e-13
Identities = 46/144 (31%), Positives = 68/144 (46%), Gaps = 5/144 (3%)
Frame = +3
Query: 1 MALSRALFLFALIASIFSTMAVAKDFVVGDE-KGW----TTLFDYQTWTANKVFRLGDTL 55
MA S A LF + FS AK+ +VG + W + W FR+GD L
Sbjct: 93 MAGSSASLLFLFLLFGFSA---AKELLVGGKIDAWKIPSSESDTLNQWAERSRFRVGDHL 263
Query: 56 TFNYVGGKDNVVRVNGSDFKSCSVPLTAPVLTSGQDKIIITTYGRRWYISSVTDHCENGQ 115
+ Y GKD+V+ V D+ +CS G K+ + G ++IS HCE GQ
Sbjct: 264 VWKYESGKDSVLEVTREDYANCSTSNPIKEYNDGNTKVKLEHPGPFYFISGSKGHCEKGQ 443
Query: 116 KLFITVQPKQDGWSPVPSPSPSPS 139
KL + V + ++ + SP+P+PS
Sbjct: 444 KLIVVVMSPRHTFTAIISPAPTPS 515
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,671,546
Number of Sequences: 63676
Number of extensions: 147037
Number of successful extensions: 3961
Number of sequences better than 10.0: 435
Number of HSP's better than 10.0 without gapping: 2575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3610
length of query: 176
length of database: 12,639,632
effective HSP length: 91
effective length of query: 85
effective length of database: 6,845,116
effective search space: 581834860
effective search space used: 581834860
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Medicago: description of AC126009.11